mRNA_P-fluviatile_contig8.14650.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14650.1 vs. uniprot
Match: A0A6H5KLX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX9_9PHAE) HSP 1 Score: 197 bits (502), Expect = 7.830e-58 Identity = 106/167 (63.47%), Postives = 124/167 (74.25%), Query Frame = -2
Query: 407 LQKYARERFDRLGAPLRLKARLIQAEAMEALLYVCLAWGPRRGQYRLVPTTHHRLLLRSTGY*RKRGTYRQLSYAHALKRVGCQRVEATVRQRRLLLAGTVARQPDGLLPKRLMFGGVVGRKDPGRGGTEQSWQKPEGRLPGVRGDAQLYRRRAVRLRGPETTLDRR 907
+++YA E FDR GAP RLKARL+QAEA+EALLY C+ W PRR Y ++ TTHHRLLLR GY RKRGTYRQLSYA ALKRVGCQ VEATVRQRRLL AG VARQPDG LPKRLMFG +VG +DPG+G EQ+W L ++ D +++ R +R P T RR
Sbjct: 136 IRRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNW------LTCLKDDMKMFEARELRGSWPLGTRARR 296
BLAST of mRNA_P-fluviatile_contig8.14650.1 vs. uniprot
Match: A0A6H5JLH5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH5_9PHAE) HSP 1 Score: 195 bits (495), Expect = 2.170e-57 Identity = 98/133 (73.68%), Postives = 110/133 (82.71%), Query Frame = -2
Query: 509 LQKYARERFDRLGAPLRLKARLIQAEAMEALLYVCLAWGPRRGQYRLVPTTHHRLLLRSTGY*RKRGTYRQLSYAHALKRVGCQRVEATVRQRRLLLAGTVARQPDGLLPKRLMFGGVVGRKDPGRGGTEQSW 907
+++YA E FDR GAP RLKARL+QAEA+EALLY C+ W PRR Y ++ TTHHRLLLR GY RKRGTYRQLSYA ALKRVGCQ VEATVRQRRLL AG VARQPDG LPKRLMFG +VG +DPG+G EQ+W
Sbjct: 85 IKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNW 217
BLAST of mRNA_P-fluviatile_contig8.14650.1 vs. uniprot
Match: A0A6H5JWS4_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS4_9PHAE) HSP 1 Score: 195 bits (495), Expect = 2.280e-56 Identity = 98/133 (73.68%), Postives = 110/133 (82.71%), Query Frame = -2
Query: 509 LQKYARERFDRLGAPLRLKARLIQAEAMEALLYVCLAWGPRRGQYRLVPTTHHRLLLRSTGY*RKRGTYRQLSYAHALKRVGCQRVEATVRQRRLLLAGTVARQPDGLLPKRLMFGGVVGRKDPGRGGTEQSW 907
+++YA E FDR GAP RLKARL+QAEA+EALLY C+ W PRR Y ++ TTHHRLLLR GY RKRGTYRQLSYA ALKRVGCQ VEATVRQRRLL AG VARQPDG LPKRLMFG +VG +DPG+G EQ+W
Sbjct: 104 IKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNW 236
BLAST of mRNA_P-fluviatile_contig8.14650.1 vs. uniprot
Match: A0A6H5KLC4_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLC4_9PHAE) HSP 1 Score: 193 bits (490), Expect = 2.410e-54 Identity = 98/133 (73.68%), Postives = 109/133 (81.95%), Query Frame = -2
Query: 509 LQKYARERFDRLGAPLRLKARLIQAEAMEALLYVCLAWGPRRGQYRLVPTTHHRLLLRSTGY*RKRGTYRQLSYAHALKRVGCQRVEATVRQRRLLLAGTVARQPDGLLPKRLMFGGVVGRKDPGRGGTEQSW 907
+++YA E FDR GAP RLKARL+QAEA+ ALLY C+ W PRR YRL+ TTHHRLLLR GY RK GTYRQLSYA ALKRVGCQ VEATVRQRRLL AG VARQPDG LPKRLMFG +VG +DPG+G EQ+W
Sbjct: 226 IRRYATELFDRPGAPFRLKARLLQAEAVAALLYGCMTWSPRRDHYRLLQTTHHRLLLRVIGYRRKGGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNW 358
BLAST of mRNA_P-fluviatile_contig8.14650.1 vs. uniprot
Match: A0A6H5KA81_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA81_9PHAE) HSP 1 Score: 194 bits (494), Expect = 1.200e-53 Identity = 98/133 (73.68%), Postives = 110/133 (82.71%), Query Frame = -2
Query: 509 LQKYARERFDRLGAPLRLKARLIQAEAMEALLYVCLAWGPRRGQYRLVPTTHHRLLLRSTGY*RKRGTYRQLSYAHALKRVGCQRVEATVRQRRLLLAGTVARQPDGLLPKRLMFGGVVGRKDPGRGGTEQSW 907
+++YA E FDR GAP RLKARL+QAEA+EALLY C+ W PRR Y ++ TTHHRLLLR GY RKRGTYRQLSYA ALKRVGCQ VEATVRQRRLL AG VARQPDG LPKRLMFG +VG ++PGRG EQ+W
Sbjct: 387 IRRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGENPGRGSPEQNW 519
BLAST of mRNA_P-fluviatile_contig8.14650.1 vs. uniprot
Match: A0A6H5KQ91_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ91_9PHAE) HSP 1 Score: 195 bits (495), Expect = 3.680e-53 Identity = 98/133 (73.68%), Postives = 110/133 (82.71%), Query Frame = -2
Query: 509 LQKYARERFDRLGAPLRLKARLIQAEAMEALLYVCLAWGPRRGQYRLVPTTHHRLLLRSTGY*RKRGTYRQLSYAHALKRVGCQRVEATVRQRRLLLAGTVARQPDGLLPKRLMFGGVVGRKDPGRGGTEQSW 907
+++YA E FDR GAP RLKARL+QAEA+EALLY C+ W PRR Y ++ TTHHRLLLR GY RKRGTYRQLSYA ALKRVGCQ VEATVRQRRLL AG VARQPDG LPKRLMFG +VG +DPG+G EQ+W
Sbjct: 499 IRRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNW 631
BLAST of mRNA_P-fluviatile_contig8.14650.1 vs. uniprot
Match: A0A6H5K7U5_9PHAE (Reverse transcriptase domain-containing protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U5_9PHAE) HSP 1 Score: 196 bits (499), Expect = 7.030e-53 Identity = 99/133 (74.44%), Postives = 110/133 (82.71%), Query Frame = -2
Query: 509 LQKYARERFDRLGAPLRLKARLIQAEAMEALLYVCLAWGPRRGQYRLVPTTHHRLLLRSTGY*RKRGTYRQLSYAHALKRVGCQRVEATVRQRRLLLAGTVARQPDGLLPKRLMFGGVVGRKDPGRGGTEQSW 907
+++YA E FDR GAP RLKARL+QAEA+EALLY C+ W PRR Y ++ TTHHRLLLR GY RKRGTYRQLSYA ALKRVGCQ VEATVRQRRLL AG VARQPDG LPKRLMFG +VG +DPGRG EQ+W
Sbjct: 884 IKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGRGNPEQNW 1016
BLAST of mRNA_P-fluviatile_contig8.14650.1 vs. uniprot
Match: A0A6H5K319_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K319_9PHAE) HSP 1 Score: 195 bits (495), Expect = 2.670e-52 Identity = 98/133 (73.68%), Postives = 110/133 (82.71%), Query Frame = -2
Query: 509 LQKYARERFDRLGAPLRLKARLIQAEAMEALLYVCLAWGPRRGQYRLVPTTHHRLLLRSTGY*RKRGTYRQLSYAHALKRVGCQRVEATVRQRRLLLAGTVARQPDGLLPKRLMFGGVVGRKDPGRGGTEQSW 907
+++YA E FDR GAP RLKARL+QAEA+EALLY C+ W PRR Y ++ TTHHRLLLR GY RKRGTYRQLSYA ALKRVGCQ VEATVRQRRLL AG VARQPDG LPKRLMFG +VG +DPG+G EQ+W
Sbjct: 1171 IKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNW 1303
BLAST of mRNA_P-fluviatile_contig8.14650.1 vs. uniprot
Match: A0A6H5JLM6_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM6_9PHAE) HSP 1 Score: 195 bits (495), Expect = 2.740e-52 Identity = 98/133 (73.68%), Postives = 110/133 (82.71%), Query Frame = -2
Query: 509 LQKYARERFDRLGAPLRLKARLIQAEAMEALLYVCLAWGPRRGQYRLVPTTHHRLLLRSTGY*RKRGTYRQLSYAHALKRVGCQRVEATVRQRRLLLAGTVARQPDGLLPKRLMFGGVVGRKDPGRGGTEQSW 907
+++YA E FDR GAP RLKARL+QAEA+EALLY C+ W PRR Y ++ TTHHRLLLR GY RKRGTYRQLSYA ALKRVGCQ VEATVRQRRLL AG VARQPDG LPKRLMFG +VG +DPG+G EQ+W
Sbjct: 1375 IKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNW 1507
BLAST of mRNA_P-fluviatile_contig8.14650.1 vs. uniprot
Match: A0A6H5JEX7_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX7_9PHAE) HSP 1 Score: 192 bits (488), Expect = 6.050e-52 Identity = 97/133 (72.93%), Postives = 109/133 (81.95%), Query Frame = -2
Query: 509 LQKYARERFDRLGAPLRLKARLIQAEAMEALLYVCLAWGPRRGQYRLVPTTHHRLLLRSTGY*RKRGTYRQLSYAHALKRVGCQRVEATVRQRRLLLAGTVARQPDGLLPKRLMFGGVVGRKDPGRGGTEQSW 907
+++YA E FDR GAP RLKARL+QAEA+EALLY C+ W PRR Y ++ TTHHRLLLR GY RKRGTYRQLSYA ALKRVGCQ VEATVRQRRLL AG VARQPDG LPKRLMFG +VG + PG+G EQ+W
Sbjct: 555 IKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEGPGQGNPEQNW 687 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14650.1 >prot_P-fluviatile_contig8.14650.1 ID=prot_P-fluviatile_contig8.14650.1|Name=mRNA_P-fluviatile_contig8.14650.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=278bp MCPSSPVYGHETFFFVSSVFGGASGLKIQEDGSYCRLLQREEVSLQRGVSback to top mRNA from alignment at P-fluviatile_contig8:3531206..3532152+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14650.1 ID=mRNA_P-fluviatile_contig8.14650.1|Name=mRNA_P-fluviatile_contig8.14650.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=947bp|location=Sequence derived from alignment at P-fluviatile_contig8:3531206..3532152+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:3531206..3532152+ >mRNA_P-fluviatile_contig8.14650.1 ID=mRNA_P-fluviatile_contig8.14650.1|Name=mRNA_P-fluviatile_contig8.14650.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1668bp|location=Sequence derived from alignment at P-fluviatile_contig8:3531206..3532152+ (Porterinema fluviatile SAG_2381)back to top |