mRNA_P-fluviatile_contig8.14647.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14647.1
Unique NamemRNA_P-fluviatile_contig8.14647.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig8.14647.1 vs. uniprot
Match: D8LKY4_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKY4_ECTSI)

HSP 1 Score: 398 bits (1022), Expect = 4.270e-136
Identity = 210/314 (66.88%), Postives = 235/314 (74.84%), Query Frame = 1
Query:   88 MATGN-FIDRLRCSSTLRPPSAADLAWLDDQAR---------DQRGSTTARPRRASLSLVLREDVAEGKVEMLVIKRAMNLRDKWSGHIALPGGRQEAGETELQAAVRECKEEVGLSLISSRFELLGRLKDSRTSTSKDALTVSCFVFVQTDGLDSPLTIQVSEVAFAWWIDTAIFYPNPAPQEAGFAVTSMVGAARKPHWKALMWLFGAETAFFPCFFLPPPPSSGHTP--VHDSAT-ASAIIAYPLGAETYVMWGLTLGVVSDLAVAGGGRAFAYQGPPYFRFRRISADFLAISFYRLRGWSSGLRGMIDSS 990
            MA  N  +DRLR SS LR P+  + AW   QAR         D     + RPR ASLSL+LRE   +GKVEMLVIKRA++LRDKWSGHIALPGGRQE GETELQ AVREC+EEVG+SL+SSRF LLGRLKDS+TSTSKDALTVSCF FVQTD  D P+TIQ +EVAFAWW+DTAIFYP+PAP+E GFAVTSMV AARKPHWK LMWLFGA T FFPCFFLPPP  SG     V DS       +AYPL A+T+VMWGLT GVVSDL VAGGGR FA++ PPYFRF  + AD LA  F R+R W   LR  + SS
Sbjct:    1 MAPANDLVDRLRSSSKLRQPTPTEAAWFSLQARAGKDSAPAVDSAARVSVRPRCASLSLILRE--VDGKVEMLVIKRAVSLRDKWSGHIALPGGRQEPGETELQTAVRECQEEVGISLMSSRFALLGRLKDSKTSTSKDALTVSCFAFVQTDKSDIPVTIQEAEVAFAWWVDTAIFYPDPAPREVGFAVTSMVKAARKPHWKGLMWLFGANTVFFPCFFLPPPSVSGRKQSLVDDSTIDVPTPVAYPLDAKTFVMWGLTFGVVSDLVVAGGGRGFAHRQPPYFRFHSVRADTLANMFCRIRRWPWNLRRALSSS 312          
BLAST of mRNA_P-fluviatile_contig8.14647.1 vs. uniprot
Match: A0A835YXA0_9STRA (Nudix hydrolase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXA0_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.880e-37
Identity = 85/210 (40.48%), Postives = 115/210 (54.76%), Query Frame = 1
Query:  268 EMLVIKRAMNLRDKWSGHIALPGGRQEAGETELQAAVRECKEEVGLSLISSRFELLGRLKDSRTS-TSKDALTVSCFVFVQTDGLDSPLTIQV--SEVAFAWWIDTAIFYPNPAPQEAGFAVTSMVGAARKPHWKALMWLFGAETAFFPCFFLPPPPSSGHTPVHDSATASAIIAYPLGAETYVMWGLTLGVVSDLAVAGGGRAFAYQGP 888
            E+LVI+RA N  D WSGHIALPGGR+  GE  L  AVRE  EEVGL + +    LLG+L+D R     ++ L V+C+VFV TD   +    +   SEVA AWW+D    +P P  ++A F V++    AR+  W+AL      +T + PCF LPPPP +      D   A+  ++         MWG T  +V+DL  A GG    +  P
Sbjct:  119 ELLVIRRADNAADAWSGHIALPGGRRARGEDGLACAVREVHEEVGLRVSARTHLLLGKLRDRRAGGDDENPLAVTCYVFVTTDSKTARARPRCAPSEVAHAWWVDVVQLWPVPRVEQAPFPVSAFPRHARRCAWRALRAALRIDTVWLPCFRLPPPPDAPKPAAADRDAAARALS---------MWGFTFWLVNDLLSAAGGETCDWLAP 319          
BLAST of mRNA_P-fluviatile_contig8.14647.1 vs. uniprot
Match: A0A067CX04_SAPPC (Nudix hydrolase domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CX04_SAPPC)

HSP 1 Score: 126 bits (316), Expect = 1.250e-30
Identity = 93/254 (36.61%), Postives = 130/254 (51.18%), Query Frame = 1
Query:   88 MATGNFIDRLRCSSTLRPPSAADLAWLDDQARDQRGSTTARPRRASLSLVLREDVAEGKVEMLVIKRAMNLRDKWSGHIALPGGRQEAGETELQAAVRECKEEVGLSLISSRFELLGRLKDSRTSTSKDALTVSCFVFVQTDGLDSPLTIQVSEVAFAWWIDTAIFYPNPAPQEAGFAVTSMVGAARKPHW-KALMWLFGAETAFFPCFFLPPPPSSGHTPVHDSATASAIIAYPLGAETYVMWGLTLGVVSDL 846
            +A   F+D L+ S   RP    D A                 R AS++ VLR D    +V +L I+RA+N RD+WSG IA PGG+ EA ET L+ A+RE KEEVGL L S+ +  LG+L D R +TS + + VS  VF+  +      ++Q SEV+ A+W+D         P+E    + +M+    +      L+ L G  T  FPC +LP P    H    D   +        GA+ YV+WGLT G+V DL
Sbjct:    3 VAPQRFVDDLQASLARRPVRVLDGA-----------------RMASVAAVLRVD--GDRVRLLFIRRAVNPRDRWSGQIAFPGGKCEANETSLETAMREAKEEVGLDLASATW--LGQLPD-RVATSGNKMVVSTHVFLWAETAAPSFSLQTSEVSAAFWVDVDHLL-TARPRELRIRLDAMMRRTSEASLLHRLLCLLGWTTIKFPCIYLPLP----HQTCSDDEASHR------GADEYVLWGLTYGMVLDL 223          
BLAST of mRNA_P-fluviatile_contig8.14647.1 vs. uniprot
Match: T0S3V0_SAPDV (Nudix hydrolase domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S3V0_SAPDV)

HSP 1 Score: 125 bits (315), Expect = 1.710e-30
Identity = 93/258 (36.05%), Postives = 131/258 (50.78%), Query Frame = 1
Query:   88 MATGNFIDRLRCSSTLRPPSAADLAWLDDQARDQRGSTTARPRRASLSLVLREDVAEGKVEMLVIKRAMNLRDKWSGHIALPGGRQEAGETELQAAVRECKEEVGLSLISSRFELLGRLKDSRTSTSKDALTVSCFVFVQTDGLDSPLTIQVSEVAFAWWID-----TAIFYPNPAPQEAGFAVTSMVGAARKPHWKALMWLFGAETAFFPCFFLPPPPSSGHTPVHDSATASAIIAYPLGAETYVMWGLTLGVVSDL 846
            +A   F+D L+ S   RP    + A                 R+AS++ VLR D    ++ +L I+RA+N RD+WSG IA PGG+ EA ET L+ A+RE +EEVGL L S+   LLG+L   R +TS + + VS  VF+ T+      T+Q SEV+ A+W+D     TA       P +A    T+       P+   ++ L G  T  FPC +LP P   G+                 GA+ YV+WGLT G+V DL
Sbjct:    2 VAPQTFLDDLQASLARRPVRVLNGA-----------------RKASVAAVLRVD--GDRIRLLFIRRAVNPRDRWSGQIAFPGGKCEANETSLETAIREAREEVGLDLASAT--LLGQLP-VRAATSGNTMVVSTHVFLWTEMAAPAFTLQTSEVSAAFWVDVEHVLTARLRELRIPLDAMRRRTN-----EAPYLHRMLRLLGWSTIAFPCIYLPLPHQRGNDDERSDR----------GADEYVLWGLTYGMVLDL 222          
BLAST of mRNA_P-fluviatile_contig8.14647.1 vs. uniprot
Match: A0A7S2CMC3_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMC3_9STRA)

HSP 1 Score: 126 bits (317), Expect = 2.380e-30
Identity = 96/251 (38.25%), Postives = 129/251 (51.39%), Query Frame = 1
Query:  214 RRASLSLVLREDVAEGKVEMLVIKRAMNLRDKWSGHIALPGGRQEAGETELQAAVRECKEEVGLSLISSRFELLGRLKDSRTSTS--KDALTVSCFVFVQTDGLDSP-LTIQVSEVAFAWWIDTAIFYPNPAPQEAGFAVTSMVGAARKPHWKALMWLFGAETA----------FFPCFFLPPPPSSGHTPVHDSATASAIIAYPLGAETYVMWGLTLGVVSDLAVAGGGRAFAYQGPPYFRFRRISADFL 927
            RRA++S+VLR +      E+L+I+RA N +DKWSG IALPGG++EAGE++L+AAVRE +EEVGL +I   F+LLG+L D   ++   K  + +S F+F Q DG   P L IQ  EVA AWW         P  +     VT +     KP  K +   F A+T           FF C  + PP                 +  P   E ++MWG+TL V SDL     GR     G  Y R    +ADF+
Sbjct:   50 RRAAVSVVLRLN-ENAATELLLIRRADNPQDKWSGDIALPGGKREAGESDLEAAVRETREEVGLDVIGGGFDLLGQLDDRMINSGGKKKKMVISVFIFGQRDGHPRPTLKIQPGEVASAWWA--------PFEELEATPVTEL----SKPFRKFMRLPFPADTLVRDVLRCDQIFFSCLAVNPPSK---------------VTKPEEREKFIMWGITLRVFSDLVHRVRGRQLL-PGRTY-RLGSKAADFV 270          
BLAST of mRNA_P-fluviatile_contig8.14647.1 vs. uniprot
Match: A0A1W0A9G9_9STRA (NUDIX family hydrolase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9G9_9STRA)

HSP 1 Score: 123 bits (309), Expect = 8.940e-30
Identity = 84/219 (38.36%), Postives = 117/219 (53.42%), Query Frame = 1
Query:  205 ARPRRASLSLVLREDVAEGKVEMLVIKRAMNLRDKWSGHIALPGGRQEAGETELQAAVRECKEEVGLSLISSRFELLGRLKDSRTSTSKDALTVSCFVFVQTDGLDSPLTIQVSEVAFAWWIDTAIFYPNPAPQEAGFAVTSMVGAARKPHWKALMWLFGAETAFFPCFFLPPPPSSGHTPVHDSATASAIIAYPLGAETYVMWGLTLGVVSDLAVAGG 861
            AR  RAS++ VLR D    +V++L I+RA+N RD+WSGHIA PGG+ E GET +  A+RE  EE+GL L S+  ++LG+L D         L VS  VF+       P  +Q SEV+  +W+D A    +P PQ     +  ++   ++P +    WL G+    FPC +LP P S      HD              + YV+WGLT G+  DL  AGG
Sbjct:   22 ARVPRASVAAVLRVD--GDRVQLLFIRRAVNPRDRWSGHIAFPGGKAEEGETSVATAIREAHEEIGLDLSSA--QILGQLNDRVAHK----LIVSTHVFLLPSAKVPPFVLQTSEVSAVFWVDIAFLATSP-PQTQPIPLEKLI---KRPSFYQ-RWL-GSSIVNFPCIYLPSPVS------HDQEQNQ---------DKYVLWGLTFGMTMDLLRAGG 211          
BLAST of mRNA_P-fluviatile_contig8.14647.1 vs. uniprot
Match: A0A7S2H138_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2H138_9EUKA)

HSP 1 Score: 112 bits (281), Expect = 3.300e-25
Identity = 84/235 (35.74%), Postives = 117/235 (49.79%), Query Frame = 1
Query:  214 RRASLSLVLREDVAEGKVEMLVIKRAMNLRDKWSGHIALPGGRQEA--GETELQAAVRECKEEVGLSLISSRFELLGRLKDSR-TSTSKDALTVSCFVFVQTDGLDS-----PLTIQVSEVAFAWWIDTAIFYPNPAPQEAGFAVTSMVGAARKPHWKALMWLFGAETAFFPCFFLPPPPSSGHTP-VHDSATASAIIAYPLGAETYVMWGLTLGVVSDLAVAGGGRAFAYQGPP 891
            RRAS++ + R     G+ ++L I+RA N RD WSG++ALPGGRQ+A  G  +   A RE  EEVGL L    +E LGRL D R    +  ++ VS F FV  +G +S      LT+Q SEVA AWW++T     +          T + G +  P    ++ + G ++  F    LP P +    P +H +             ETY +WGLTL   SD+    GGR     G P
Sbjct:   27 RRASIAAIFRVHPTSGEEQVLFIRRADNPRDPWSGNVALPGGRQDAVDGGDDEATATRETLEEVGLDLTG--WERLGRLTDDRIVKRAGGSMAVSMFGFVARNGGNSLPSGDELTLQASEVAEAWWVNTCWIDADRLEWRKVGLGTMVKGLSSWPVAARVLHVLGLDSFNFAAIALPLPVTMAPLPPLHPNH------------ETYQLWGLTLAFFSDVLRNSGGRPLVGAGAP 247          
BLAST of mRNA_P-fluviatile_contig8.14647.1 vs. uniprot
Match: F4P007_BATDJ (Nudix hydrolase domain-containing protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4P007_BATDJ)

HSP 1 Score: 107 bits (267), Expect = 4.020e-23
Identity = 57/133 (42.86%), Postives = 81/133 (60.90%), Query Frame = 1
Query:  196 STTARPRRASLSLVLREDVAEGKVEMLVIKRAMNLRDKWSGHIALPGGRQEAGETELQAAVRECKEEVGLSLISSRFELLGRLKDSRTS---TSKDALTVSCFVFVQTDGLDSPLTIQVSEVAFAWWIDTAIF 585
            ST   PRRA ++++LR       +E+L I+RA NLRD+WSGH+A PGG+ E+GE++ QA  RE  EE+GL L SS F+ LG L D       T    L ++C V++QT     P+ +   EVA  +W+D  +F
Sbjct:   24 STLLSPRRAGVAIILRIHPTTDALEILYIRRAWNLRDRWSGHMAFPGGKAESGESDQQATERETLEEIGLDLQSSAFKYLGVLDDREIRSPITRTRILVLTCRVYLQTVSETPPIVLSPKEVADIYWVDIKVF 156          
BLAST of mRNA_P-fluviatile_contig8.14647.1 vs. uniprot
Match: A0A024UMJ1_9STRA (Nudix hydrolase domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UMJ1_9STRA)

HSP 1 Score: 105 bits (262), Expect = 6.880e-23
Identity = 80/238 (33.61%), Postives = 122/238 (51.26%), Query Frame = 1
Query:  253 AEGKVEMLVIKRAMNLRDKWSGHIALPGGRQEAGETELQAAVRECKEEVGLSLISSRFELLGRLKDSRTSTSKDALTVSCFVFVQTDGLDSPLT--IQVSEVAFAWWIDTAIFYPNPAPQEAGFAVTSMVGAARKPHWKALMWLFGAETAFFPCFFLPPPPSSGHTPVHDSATASAIIAYPLGAETYVMWGLTLGVVSDL-AVAGGGRAFAYQGPP-----YFRFRRISADFLAISFY 942
            A   +E+L I+RA+N RD+WSGHIA PGGR EAGE+ L AA RE  EE+G++L  ++  +LG+L D R +T ++ L VS FVF     L  P T  +Q +EV+   W+  +I    P  +E  ++V + +G      ++A +      T  FPC +LP P            +A   +++   A  YV+WG+T  +  DL  +  G R       P     Y R   I    +A++ +
Sbjct:   41 ANDSLEVLFIRRAINPRDRWSGHIAFPGGRVEAGESPLDAARRETMEEIGVNL--NQAAVLGQL-DDRLAT-RNGLVVSTFVFFL---LAKPTTMALQPNEVSDVLWVPYSILVSTPR-RELRYSVGTYLGRFVPRIFRATLATIPLGTITFPCLYLPSP------------SAEFPMSHDREAHEYVLWGVTYSMFLDLQTIMSGDRDAVGSAKPSLAGLYHRIILILVSLIAVALH 258          
BLAST of mRNA_P-fluviatile_contig8.14647.1 vs. uniprot
Match: A0A485L640_9STRA (Aste57867_15462 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L640_9STRA)

HSP 1 Score: 103 bits (258), Expect = 2.450e-22
Identity = 80/217 (36.87%), Postives = 105/217 (48.39%), Query Frame = 1
Query:  256 EGKVEMLVIKRAMNLRDKWSGHIALPGGRQEAGETELQAAVRECKEEVGLSLISSRFELLGRLKDSRTSTSKDALTVSCFVFVQTDGLDSPLTIQVSEVAFAWWIDTAIFYPNPAPQEAGFAVTSMVGAA--RKPHWKALMWLFGAETAFFPCFFLPPPPSSGHTPVHDSATASAIIAYPLGAETYVMWGLTLGVVSDLA-VAGGGRAFAYQGPPYF 897
            +G  E+L I+RA+N RD+WSGHIA PGGR E GET L+AA RE  EEVGLSL  +    LG L D R +T  + L V  FVF+      +  T+Q SEV  A+W+  A     P    A +  T     +    P ++A++   G     FPC  LP P  S   P                A  +++WGLT  +V DL  + G  R       P F
Sbjct:   42 DGVAELLFIRRAVNPRDRWSGHIAFPGGRVEKGETPLEAAHRETMEEVGLSLADATC--LGHL-DDRFATG-NVLVVHTFVFLL-PVKPTAFTLQTSEVNDAFWVPYAHIATAPVHTLA-YPTTRFFPRSLQHSPTFQAIVSAVGLGHVQFPCVHLPHPSMSAMAP-------------RTSASDFILWGLTYSIVLDLLRIHGAARPIVGSATPRF 239          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKY4_ECTSI4.270e-13666.88Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A835YXA0_9STRA1.880e-3740.48Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A067CX04_SAPPC1.250e-3036.61Nudix hydrolase domain-containing protein n=1 Tax=... [more]
T0S3V0_SAPDV1.710e-3036.05Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7S2CMC3_9STRA2.380e-3038.25Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A1W0A9G9_9STRA8.940e-3038.36NUDIX family hydrolase n=1 Tax=Thraustotheca clava... [more]
A0A7S2H138_9EUKA3.300e-2535.74Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
F4P007_BATDJ4.020e-2342.86Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A024UMJ1_9STRA6.880e-2333.61Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A485L640_9STRA2.450e-2236.87Aste57867_15462 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3517208..3520261 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score130.2
Seed ortholog evalue1.8e-27
Seed eggNOG ortholog112098.XP_008607020.1
GOsGO:0003674,GO:0003824,GO:0016787
EggNOG free text desc.CoA pyrophosphatase activity
EggNOG OGsCOG0494@1,KOG3069@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNUDIX hydrolase domain-like
Ec32 orthologEc-11_006020.1
Exons7
Model size994
Cds size993
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817260.8014688-CDS-P-fluviatile_contig8:3517207..35175091622817260.8014688-CDS-P-fluviatile_contig8:3517207..3517509Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3517208..3517509 +
1693571786.7058353-CDS-P-fluviatile_contig8:3517207..35175091693571786.7058353-CDS-P-fluviatile_contig8:3517207..3517509Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3517208..3517509 +
1622817260.812596-CDS-P-fluviatile_contig8:3517785..35179021622817260.812596-CDS-P-fluviatile_contig8:3517785..3517902Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3517786..3517902 +
1693571786.7289877-CDS-P-fluviatile_contig8:3517785..35179021693571786.7289877-CDS-P-fluviatile_contig8:3517785..3517902Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3517786..3517902 +
1622817260.8228202-CDS-P-fluviatile_contig8:3518084..35181611622817260.8228202-CDS-P-fluviatile_contig8:3518084..3518161Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3518085..3518161 +
1693571786.7400923-CDS-P-fluviatile_contig8:3518084..35181611693571786.7400923-CDS-P-fluviatile_contig8:3518084..3518161Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3518085..3518161 +
1622817260.8360193-CDS-P-fluviatile_contig8:3518779..35188461622817260.8360193-CDS-P-fluviatile_contig8:3518779..3518846Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3518780..3518846 +
1693571786.7599554-CDS-P-fluviatile_contig8:3518779..35188461693571786.7599554-CDS-P-fluviatile_contig8:3518779..3518846Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3518780..3518846 +
1622817260.8472428-CDS-P-fluviatile_contig8:3519208..35193081622817260.8472428-CDS-P-fluviatile_contig8:3519208..3519308Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3519209..3519308 +
1693571786.7708056-CDS-P-fluviatile_contig8:3519208..35193081693571786.7708056-CDS-P-fluviatile_contig8:3519208..3519308Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3519209..3519308 +
1622817260.8568878-CDS-P-fluviatile_contig8:3519589..35198251622817260.8568878-CDS-P-fluviatile_contig8:3519589..3519825Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3519590..3519825 +
1693571786.7831442-CDS-P-fluviatile_contig8:3519589..35198251693571786.7831442-CDS-P-fluviatile_contig8:3519589..3519825Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3519590..3519825 +
1622817260.8673973-CDS-P-fluviatile_contig8:3520167..35202611622817260.8673973-CDS-P-fluviatile_contig8:3520167..3520261Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3520168..3520261 +
1693571786.795831-CDS-P-fluviatile_contig8:3520167..35202611693571786.795831-CDS-P-fluviatile_contig8:3520167..3520261Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3520168..3520261 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14647.1prot_P-fluviatile_contig8.14647.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 3517208..3520261 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14647.1

>prot_P-fluviatile_contig8.14647.1 ID=prot_P-fluviatile_contig8.14647.1|Name=mRNA_P-fluviatile_contig8.14647.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=331bp
TAAATTARRAESLFLSPSLCYGFYSAVHTMATGNFIDRLRCSSTLRPPSA
ADLAWLDDQARDQRGSTTARPRRASLSLVLREDVAEGKVEMLVIKRAMNL
RDKWSGHIALPGGRQEAGETELQAAVRECKEEVGLSLISSRFELLGRLKD
SRTSTSKDALTVSCFVFVQTDGLDSPLTIQVSEVAFAWWIDTAIFYPNPA
PQEAGFAVTSMVGAARKPHWKALMWLFGAETAFFPCFFLPPPPSSGHTPV
HDSATASAIIAYPLGAETYVMWGLTLGVVSDLAVAGGGRAFAYQGPPYFR
FRRISADFLAISFYRLRGWSSGLRGMIDSS*
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mRNA from alignment at P-fluviatile_contig8:3517208..3520261+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14647.1 ID=mRNA_P-fluviatile_contig8.14647.1|Name=mRNA_P-fluviatile_contig8.14647.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3054bp|location=Sequence derived from alignment at P-fluviatile_contig8:3517208..3520261+ (Porterinema fluviatile SAG_2381)
ACAGCGGCGGCAACAACAGCGCGACGTGCGGAATCGCTCTTCCTCTCTCC ATCCCTCTGCTACGGATTTTACAGTGCGGTCCATACTATGGCGACCGGCA ATTTCATCGATCGATTAAGGTGCTCGTCGACGTTGCGGCCGCCGAGCGCA GCAGACCTCGCGTGGCTTGATGATCAAGCCCGTGACCAACGAGGGTCAAC CACAGCAAGGCCTCGACGTGCGTCGCTGTCCCTCGTACTGCGGGAGGATG TCGCAGAGGGCAAGGTGGAGATGCTGGTCATCAAGAGGGCCATGAACCTG AGGTGCGTAATCTCAAAGAAGGTTGCTCATTGTGGGGATGTGTGTATTCG GCAATCCTTTTGACCTTTGCACACTGCGGAGAGATCCTTACTCTCTTGGA TGATGGGGGGCGTACTCATGTTTTGCATGCCTTAGTTGTTAGACCATTGA CCACGCGTCCTCGAGAGGACGGAGCATTGTTCCCGCAATGATGGGGAACC CAAAAATTTGCTTTCACATTTCCTATCTCCGACCACCTTCGAAACTGCTC ATGACCTTGTAATCATCGGCGATTTCAGAGATAAATGGAGTGGGCACATA GCTTTGCCAGGCGGGAGACAGGAGGCCGGAGAGACGGAGTTGCAAGCCGC CGTCAGAGAGTGCAAGGAGGAGGTCGGGCTTTCCTTGATTTCCAGGTGCG GCGTGCATGTATGATGTCGGGTCGAACCATTAGGCGGCTACTGCTAAACC CCGATGGTGTAGAACCGTCTTTGTGTCGTTTGTCTCTTGAATTCCCTGCC CCTGTGACGGTAAATTACCTTTGCGGTAGTTTTCCGGTTCCTCTCTCACG CGTCTCAATCGCATCTACACAATGCAGCCGCTTCGAGCTCTTGGGGAGGC TGAAGGACTCGAGAACAAGCACGAGCAAGGATGCACTGACAGTCTCATGT TTCGGTGAGCCCAGCCTTAACCGTGGTATGTAGCTACTTTGTCCCGAAGT TCTTCTCTAGTAATCCGTATTCCCCAGGTACCCTTCTGCCGTAGACTCTA CTTGTGGGGGGAGGCGACGAGAGCACAAGTATTGAACGCCACACCTTGTA CCGTTTCTCAAAAGGCTAATTTATTTTCCACCGTGAACGTAGTTCGGGGA TGGTCGTCACCGAAAGCATCAAGTGTTTGTCGTCGAGGCAAATGCTCAGA TCTGGCTATCAGCTGCAAGCGGCAGATTGCCAGGAGCGGCGCACTCTTTC CAAGGAAATCACGTCGTTCTCTCAAGGGAGTACGGGGGTCGGTGGACAGG AGGCTGTCTACTATTCCTTCGACCGGAAGTGTTTGATATATGGCCATTCA GTGCACCGTTTTTCGTGCGATTGGAGAGGCGACCTCTTTACTTTTTTTGA AGGGAGAGTGTTGTTTTGGAGCACTAACGGCTGGCCTTGTACACTCAAGT TTCAAAAGCAGTGGCTAACACAACGTAAAATCTGCCCAAATTTCTTAGCT ATACGATGTACCCGGCGCTCATGTCGATCTCTGATGGTGTGCCGCCTTCG CGTCTCTCTTCGCTCCGACCAGTGTTTGTTCAGACCGACGGCTTGGACTC GCCTTTGACTATTCAGGTTTCCGAGGTGGCGTTTGCTTGGTGAGCGAGGG TCGGAGAGAGAAAAAGGGGGAGGGAGACATAGAGAGCGCGAGGTTTGCAA GAGCAAATTGATGGGAAGTGGTTTGACACCATCGGGCGCCCGGCCTCGAA ACGGTACTGCCTTTTCTCGGATTCCTGCGACAGGGAAGACGTGGAGGGAA CACTTTTGCCGCCGTTTAATGATGAACGTTATTTGCGCACACGGTTTGCT GGTACTCTGCAAGCATCCACCTGTTGCCTTTGGAGACCTTGTGCTTGAGG TTTTTCAATCTCTTGTTCTGAGTGCTAGAGAAATGCACTCTTCAGCTTTC AGTCTTTCAGACGCCTCATGCCCACCTGGACGTCTTTGCGCGTCATTTCA GGTGGATAGACACCGCAATATTTTATCCCAACCCTGCCCCTCAAGAGGCC GGGTTTGCTGTCACCAGCATGGTTGGAGCTGCGAGGAAGCCGCATTGGAA GGTGAGACATGTTACCCACGTTCTCATAAAGGACCTCGCCAGGTCGGCAT AGCATTGAGCTCTGCACACTGATTTTACGAAATGGTCAGGCGGATATTGT GGGAGAACCGTGGCCAGGCGCCTCCAACTTCAGCAGCGCGGTGCGCTCTC CGCCTGCGGGCACCTTTTGACGCGGCACCCGCATGCATAATAACAATCAC CCGCCATGGTCCTGCTTCTGTCAATGGCCTGATTGAATTTGTCCGGATGT GCCGCTCTCCTTGTTGTTTCCGCGAATCGGAGGCGCTGATGTGGCTGTTC GGGGCAGAAACAGCCTTCTTCCCCTGCTTCTTCCTGCCTCCGCCCCCGTC GTCGGGGCACACCCCTGTCCATGACTCCGCGACGGCTTCAGCCATTATCG CGTACCCGCTCGGTGCGGAGACGTACGTGATGTGGGGGCTGACGTTAGGG GTGGTTTCTGACCTGGCCGTGGCGGGCGGTGGACGTGCCTTCGCGTACCA GGGTCCTCCGTACTTTCGGTAAGAGTGCGTCCAACACAGGTGCTCTGCGC TCCTCCTTGCGTTGTTTACTTCGTATAAAAAAGAGCTACGCAACCCTTGA CATTTGTGGCTCGCTTTTACGGCGCCTGGGTTATTGTGCCAAATCGTCCC GTGTTTGTGCGCTCACAGTCAGGATTCCGAACAGGGTTGGCGACGCAGCT CGATCGCGTCGCGTCGCCGCCTTTCGGCGAAGTGCCGCAGATCTCGCACA TGGGCATATATGTACACGTTGATGTGTCGTATGTCCAAGACGCCCCTGTT TTCGACCCTAAAGTCCTGCGTGTGTGCAATGGAATCTCGCGATACGTTGA TGGCGGCTAGGTTTCGCAGGATCTCGGCGGACTTCTTGGCGATTTCGTTC TACAGGCTAAGGGGGTGGAGCTCTGGCTTGAGAGGGATGATTGATTCCTC TTGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:3517208..3520261+

>mRNA_P-fluviatile_contig8.14647.1 ID=mRNA_P-fluviatile_contig8.14647.1|Name=mRNA_P-fluviatile_contig8.14647.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1986bp|location=Sequence derived from alignment at P-fluviatile_contig8:3517208..3520261+ (Porterinema fluviatile SAG_2381)
ACAGCGGCGGCAACAACAGCGCGACGTGCGGAATCGCTCTTCCTCTCTCC
ATCCCTCTGCTACGGATTTTACAGTGCGGTCCATACTATGGCGACCGGCA
ATTTCATCGATCGATTAAGGTGCTCGTCGACGTTGCGGCCGCCGAGCGCA
GCAGACCTCGCGTGGCTTGATGATCAAGCCCGTGACCAACGAGGGTCAAC
CACAGCAAGGCCTCGACGTGCGTCGCTGTCCCTCGTACTGCGGGAGGATG
TCGCAGAGGGCAAGGTGGAGATGCTGGTCATCAAGAGGGCCATGAACCTG
AGACAGCGGCGGCAACAACAGCGCGACGTGCGGAATCGCTCTTCCTCTCT
CCATCCCTCTGCTACGGATTTTACAGTGCGGTCCATACTATGGCGACCGG
CAATTTCATCGATCGATTAAGGTGCTCGTCGACGTTGCGGCCGCCGAGCG
CAGCAGACCTCGCGTGGCTTGATGATCAAGCCCGTGACCAACGAGGGTCA
ACCACAGCAAGGCCTCGACGTGCGTCGCTGTCCCTCGTACTGCGGGAGGA
TGTCGCAGAGGGCAAGGTGGAGATGCTGGTCATCAAGAGGGCCATGAACC
TGAGAGATAAATGGAGTGGGCACATAGCTTTGCCAGGCGGGAGACAGGAG
GCCGGAGAGACGGAGTTGCAAGCCGCCGTCAGAGAGTGCAAGGAGGAGGT
CGGGCTTTCCTTGATTTCCAGAGATAAATGGAGTGGGCACATAGCTTTGC
CAGGCGGGAGACAGGAGGCCGGAGAGACGGAGTTGCAAGCCGCCGTCAGA
GAGTGCAAGGAGGAGGTCGGGCTTTCCTTGATTTCCAGCCGCTTCGAGCT
CTTGGGGAGGCTGAAGGACTCGAGAACAAGCACGAGCAAGGATGCACTGA
CAGTCTCATGTTTCGCCGCTTCGAGCTCTTGGGGAGGCTGAAGGACTCGA
GAACAAGCACGAGCAAGGATGCACTGACAGTCTCATGTTTCGTGTTTGTT
CAGACCGACGGCTTGGACTCGCCTTTGACTATTCAGGTTTCCGAGGTGGC
GTTTGCTTGTGTTTGTTCAGACCGACGGCTTGGACTCGCCTTTGACTATT
CAGGTTTCCGAGGTGGCGTTTGCTTGGTGGATAGACACCGCAATATTTTA
TCCCAACCCTGCCCCTCAAGAGGCCGGGTTTGCTGTCACCAGCATGGTTG
GAGCTGCGAGGAAGCCGCATTGGAAGGTGGATAGACACCGCAATATTTTA
TCCCAACCCTGCCCCTCAAGAGGCCGGGTTTGCTGTCACCAGCATGGTTG
GAGCTGCGAGGAAGCCGCATTGGAAGGCGCTGATGTGGCTGTTCGGGGCA
GAAACAGCCTTCTTCCCCTGCTTCTTCCTGCCTCCGCCCCCGTCGTCGGG
GCACACCCCTGTCCATGACTCCGCGACGGCTTCAGCCATTATCGCGTACC
CGCTCGGTGCGGAGACGTACGTGATGTGGGGGCTGACGTTAGGGGTGGTT
TCTGACCTGGCCGTGGCGGGCGGTGGACGTGCCTTCGCGTACCAGGGTCC
TCCGTACTTTCGGCGCTGATGTGGCTGTTCGGGGCAGAAACAGCCTTCTT
CCCCTGCTTCTTCCTGCCTCCGCCCCCGTCGTCGGGGCACACCCCTGTCC
ATGACTCCGCGACGGCTTCAGCCATTATCGCGTACCCGCTCGGTGCGGAG
ACGTACGTGATGTGGGGGCTGACGTTAGGGGTGGTTTCTGACCTGGCCGT
GGCGGGCGGTGGACGTGCCTTCGCGTACCAGGGTCCTCCGTACTTTCGGT
TTCGCAGGATCTCGGCGGACTTCTTGGCGATTTCGTTCTACAGGCTAAGG
GGGTGGAGCTCTGGCTTGAGAGGGATGATTGATTCCTCTTGAGTTTCGCA
GGATCTCGGCGGACTTCTTGGCGATTTCGTTCTACAGGCTAAGGGGGTGG
AGCTCTGGCTTGAGAGGGATGATTGATTCCTCTTGA
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