mRNA_P-fluviatile_contig8.14643.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14643.1
Unique NamemRNA_P-fluviatile_contig8.14643.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig8.14643.1 vs. uniprot
Match: D8LKY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKY0_ECTSI)

HSP 1 Score: 362 bits (930), Expect = 2.870e-113
Identity = 187/193 (96.89%), Postives = 190/193 (98.45%), Query Frame = 3 
Query:  837 PSMSSQSTAPARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQNQGPKNVCVLGTRHCSYLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSPASRELIQKVRNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSLNMIVTELYLD 1415
            PS+SSQS APARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQNQGPKNVCVLGTRHCS+LHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQS ASRELIQKV NVVTNP+NDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSLNMIVTELYLD
Sbjct:  124 PSLSSQSAAPARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQNQGPKNVCVLGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSAASRELIQKVTNVVTNPVNDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSLNMIVTELYLD 316
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BLAST of mRNA_P-fluviatile_contig8.14643.1 vs. uniprot
Match: A0A835ZAP1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAP1_9STRA)

HSP 1 Score: 286 bits (733), Expect = 1.820e-86
Identity = 149/193 (77.20%), Postives = 165/193 (85.49%), Query Frame = 3 
Query:  837 PSMSSQSTAPARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQNQGPKNVCVLGTRHCSYLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSPASRELIQKVRNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSLNMIVTELYLD 1415
            P +SS    P   +IPT VAVVG PQ  VEKEYSI+ ILKELAEIQ QGPKN C+LGTRHCS+LHQQIIELLAYALVLSGNHVFTSGA GTNAATIRGALRAER +LLTVVLPQSL KQS  S+EL+ +V+NV+  P NDHLPLD ASRLCNSDLLSR +QLICFAFHDS TIIET +EAR+L+MIVTEL+LD
Sbjct:    6 PELSSPQ--PTTVKIPTKVAVVGRPQIRVEKEYSIDTILKELAEIQRQGPKNYCILGTRHCSFLHQQIIELLAYALVLSGNHVFTSGAGGTNAATIRGALRAERPDLLTVVLPQSLAKQSDESQELLTQVQNVIDAPQNDHLPLDVASRLCNSDLLSRADQLICFAFHDSHTIIETAREARALDMIVTELFLD 196
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BLAST of mRNA_P-fluviatile_contig8.14643.1 vs. uniprot
Match: A0A7R9YDI6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDI6_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.440e-68
Identity = 126/180 (70.00%), Postives = 146/180 (81.11%), Query Frame = 3 
Query:  879 IPTDVAVVGAPQQVVE-KEYSIEAILKELAEIQNQGPKNVCVLGTRHCSYLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSPASRELIQKVRNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSLNMIVTELYLD 1415
            IP  V +VG PQ V   K Y+I++ILKELA IQ QGPK+ C+LGTRHCS+LHQQIIELLAYALVLSGNHV+TSGA GTNAA IRGALRA   +LLTVVLPQS+ KQ   S++L+ KV+NVV    ND L LD ASRLCNSDLLSR EQLI FAFH+S+T+IE TKEA+S +M+VT LYLD
Sbjct:   62 IPDVVPIVGEPQAVFTGKNYTIDSILKELAAIQQQGPKSYCILGTRHCSFLHQQIIELLAYALVLSGNHVYTSGAGGTNAAAIRGALRAGAPDLLTVVLPQSISKQPAESQKLLAKVKNVVEMSQNDGLGLDMASRLCNSDLLSRAEQLIAFAFHNSRTVIEATKEAQSRDMVVTVLYLD 241
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BLAST of mRNA_P-fluviatile_contig8.14643.1 vs. uniprot
Match: A0A7R9WLF4_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WLF4_9STRA)

HSP 1 Score: 241 bits (615), Expect = 3.880e-68
Identity = 125/183 (68.31%), Postives = 152/183 (83.06%), Query Frame = 3 
Query:  870 RTEIPTDVAVVGAPQ-QVVEKEYSIEAILKELAEIQNQGPKNVCVLGTRHCSYLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSPASRELIQKVRNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSLNMIVTELYLD 1415
            R E+  + A VG PQ +V EKE S+  ILKELA IQ QGP+  C+LGTRHCSYLHQQIIELLAYALVLSGNHV+TSGA GT+AATIRGALRAER++LLTVVLPQSLEKQ   S+EL++KV +++  P ND + LD ASR+CNS LLS+T+QLI FAFH+S T+IE TKEA++L+M+VT L+LD
Sbjct:  141 RLELQRETANVGKPQLRVKEKEQSVTDILKELAAIQQQGPQKYCILGTRHCSYLHQQIIELLAYALVLSGNHVYTSGAGGTHAATIRGALRAEREDLLTVVLPQSLEKQPKESQELLEKVDDLIEMPQNDGMSLDVASRICNSYLLSQTDQLISFAFHESTTVIEATKEAKTLDMLVTTLFLD 323
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BLAST of mRNA_P-fluviatile_contig8.14643.1 vs. uniprot
Match: A0A6V2EYW5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EYW5_9STRA)

HSP 1 Score: 237 bits (605), Expect = 2.190e-67
Identity = 121/173 (69.94%), Postives = 147/173 (84.97%), Query Frame = 3 
Query:  900 VGAPQQ-VVEKEYSIEAILKELAEIQNQGPKNVCVLGTRHCSYLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSPASRELIQKVRNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSLNMIVTELYLD 1415
            VG PQ+ V+EKE S+ +ILKELA IQ QGP+  CVLGTRHCS+LHQQIIELLAYALVLSGNHV+TSGA GTNAA IRGA+RAER +LLTVVLPQSL KQ+  S+EL++ V ++VT P ND + LD ASR+CNS LLS+T+QLI FAFH+S+T+IE +KEA+ L+M+VT LYLD
Sbjct:  104 VGDPQKLVIEKEMSVTSILKELAAIQAQGPQKYCVLGTRHCSFLHQQIIELLAYALVLSGNHVYTSGASGTNAAAIRGAIRAERPDLLTVVLPQSLNKQTKESQELLKDVTDLVTMPQNDDMSLDVASRICNSYLLSQTDQLISFAFHESQTVIEASKEAQKLDMLVTTLYLD 276
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BLAST of mRNA_P-fluviatile_contig8.14643.1 vs. uniprot
Match: A0A7S2XNC9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNC9_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.370e-66
Identity = 121/175 (69.14%), Postives = 148/175 (84.57%), Query Frame = 3 
Query:  897 VVGAPQQ--VVEKEYSIEAILKELAEIQNQGPKNVCVLGTRHCSYLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSPASRELIQKVRNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSLNMIVTELYLD 1415
            +VG PQ+  V EKE+S+ AILKELA IQ QGP+  CVLGTRHCS+LHQQIIELLAYALVLSGNHV+TSGA GT+AATIRGALRAER +LLTVV+PQSL KQ+  S+EL++ V +++T P ND + LD ASR+CNS LLS+++QLI FAFH+S T+IE TKEA+ L+M+VT LYLD
Sbjct:  130 LVGDPQRKMVKEKEWSVSAILKELAAIQQQGPQKYCVLGTRHCSFLHQQIIELLAYALVLSGNHVYTSGAGGTHAATIRGALRAERPDLLTVVVPQSLGKQAKESQELLKDVTDLITMPQNDDMSLDVASRICNSYLLSQSDQLISFAFHESTTVIEATKEAKELDMLVTTLYLD 304
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BLAST of mRNA_P-fluviatile_contig8.14643.1 vs. uniprot
Match: A0A1E7FA35_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FA35_9STRA)

HSP 1 Score: 228 bits (582), Expect = 8.700e-66
Identity = 112/164 (68.29%), Postives = 139/164 (84.76%), Query Frame = 3 
Query:  924 EKEYSIEAILKELAEIQNQGPKNVCVLGTRHCSYLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSPASRELIQKVRNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSLNMIVTELYLD 1415
            E++YS+  ILKELA IQ QGP+   +LGTRHCSYLHQQIIELLAYALVLSGNHVFTSGA GT+AA +RGALRAER++LLTVVLPQS+ KQ+  S+EL+ KV +V+T P ND + LD ASR+CNS +LS T+QLI FAFH+S T++E +KEA++L+M+VT LYLD
Sbjct:    1 ERDYSVTNILKELAAIQQQGPQKYSILGTRHCSYLHQQIIELLAYALVLSGNHVFTSGAGGTHAAAVRGALRAEREDLLTVVLPQSMSKQTKESQELLDKVDDVITMPQNDDMSLDVASRICNSYILSLTDQLISFAFHESNTVVEASKEAKALDMLVTTLYLD 164
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BLAST of mRNA_P-fluviatile_contig8.14643.1 vs. uniprot
Match: A0A448ZCS9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCS9_9STRA)

HSP 1 Score: 235 bits (600), Expect = 9.220e-66
Identity = 120/173 (69.36%), Postives = 145/173 (83.82%), Query Frame = 3 
Query:  900 VGAPQ-QVVEKEYSIEAILKELAEIQNQGPKNVCVLGTRHCSYLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSPASRELIQKVRNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSLNMIVTELYLD 1415
            VG PQ +V  K+ S+  ILKELA IQ QGP+  C+LGTRHCSYLHQQIIELLAYALVLSGNHV+TSGA GTNAAT+RGALRAER++LLTVVLPQSL KQ+  S+EL++KV +++T P ND L LD ASR+CNS LLS T+QL+ FAFH+S T+IE +KEA+ L+M+VT LYLD
Sbjct:  174 VGDPQLRVKVKDKSVTDILKELAAIQQQGPQKYCILGTRHCSYLHQQIIELLAYALVLSGNHVYTSGAPGTNAATVRGALRAEREDLLTVVLPQSLSKQTSESQELLKKVDDLITMPQNDELSLDVASRICNSYLLSLTDQLVSFAFHESTTVIEASKEAKKLDMLVTTLYLD 346
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BLAST of mRNA_P-fluviatile_contig8.14643.1 vs. uniprot
Match: A0A7S2SV08_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV08_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.010e-65
Identity = 119/195 (61.03%), Postives = 151/195 (77.44%), Query Frame = 3 
Query:  831 GAPSMSSQSTAPARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQNQGPKNVCVLGTRHCSYLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSPASRELIQKVRNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSLNMIVTELYLD 1415
            G   + SQ T+ +R  +P    +VG PQ+ +++ YS+E ILKELA IQ  GP+  C+LGTRHCS+LHQQIIELL+YALVL+GNH++TSG+ GTNAA IRGALR ER ELLTV+LPQSL KQ   S+EL+++V+NVV N  ND L LD ASRLCNS LL   +QLI FAFHDS T+IE ++EA+ L+++VT LYLD
Sbjct:   87 GGNPLQSQPTS-SRPPVP----IVGEPQRKLDQSYSLEQILKELAAIQQTGPRKYCILGTRHCSFLHQQIIELLSYALVLTGNHIYTSGSQGTNAAAIRGALRGERPELLTVILPQSLTKQPLESQELLKQVKNVVENSKNDDLSLDVASRLCNSKLLVSADQLIAFAFHDSYTVIEASREAQDLDIVVTTLYLD 276
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BLAST of mRNA_P-fluviatile_contig8.14643.1 vs. uniprot
Match: A0A7S2I159_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I159_9STRA)

HSP 1 Score: 234 bits (596), Expect = 1.460e-65
Identity = 119/173 (68.79%), Postives = 147/173 (84.97%), Query Frame = 3 
Query:  900 VGAPQQVVEKE-YSIEAILKELAEIQNQGPKNVCVLGTRHCSYLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKELLTVVLPQSLEKQSPASRELIQKVRNVVTNPINDHLPLDAASRLCNSDLLSRTEQLICFAFHDSKTIIETTKEARSLNMIVTELYLD 1415
            VG PQ+++EK+  S+ +ILKELA IQ QGP+  CVLGTRHCS+LHQQIIELLAYALVLSGNHV+TSGA GTNAA IRGA+RAER +LLTVVLPQSL KQ+  S+EL++ V ++VT P ND + LD ASR+CNS LLS+T+QLI FAFH+S+T+IE +KEA+ L+M+VT LYLD
Sbjct:  147 VGDPQKLLEKKSMSVTSILKELAAIQAQGPQKYCVLGTRHCSFLHQQIIELLAYALVLSGNHVYTSGASGTNAAAIRGAIRAERPDLLTVVLPQSLHKQTKESQELLKDVTDLVTMPQNDDMSLDVASRICNSYLLSQTDQLISFAFHESQTVIEASKEAQKLDMLVTTLYLD 319
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14643.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKY0_ECTSI2.870e-11396.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAP1_9STRA1.820e-8677.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9YDI6_9STRA1.440e-6870.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9WLF4_9STRA3.880e-6868.31Hypothetical protein n=2 Tax=Craspedostauros austr... [more]
A0A6V2EYW5_9STRA2.190e-6769.94Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2XNC9_9STRA1.370e-6669.14Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A1E7FA35_9STRA8.700e-6668.29Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
A0A448ZCS9_9STRA9.220e-6669.36Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2SV08_9STRA1.010e-6561.03Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2I159_9STRA1.460e-6568.79Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3475876..3483353 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score364.4
Seed ortholog evalue5.8e-98
Seed eggNOG ortholog2880.D8LKY0
EggNOG OGs28KAM@1,2QSRD@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-11_005970.1
Exons5
Model size3211
Cds size1011
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817260.1915607-UTR-P-fluviatile_contig8:3475875..34762821622817260.1915607-UTR-P-fluviatile_contig8:3475875..3476282Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3475876..3476282 +
1693571785.8571315-UTR-P-fluviatile_contig8:3475875..34762821693571785.8571315-UTR-P-fluviatile_contig8:3475875..3476282Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3475876..3476282 +
1622817260.2563717-UTR-P-fluviatile_contig8:3481560..34833531622817260.2563717-UTR-P-fluviatile_contig8:3481560..3483353Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3481561..3483353 +
1693571785.9223907-UTR-P-fluviatile_contig8:3481560..34833531693571785.9223907-UTR-P-fluviatile_contig8:3481560..3483353Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3481561..3483353 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817260.2044008-CDS-P-fluviatile_contig8:3476282..34767921622817260.2044008-CDS-P-fluviatile_contig8:3476282..3476792Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3476283..3476792 +
1693571785.8726983-CDS-P-fluviatile_contig8:3476282..34767921693571785.8726983-CDS-P-fluviatile_contig8:3476282..3476792Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3476283..3476792 +
1622817260.2144148-CDS-P-fluviatile_contig8:3478391..34785111622817260.2144148-CDS-P-fluviatile_contig8:3478391..3478511Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3478392..3478511 +
1693571785.8833284-CDS-P-fluviatile_contig8:3478391..34785111693571785.8833284-CDS-P-fluviatile_contig8:3478391..3478511Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3478392..3478511 +
1622817260.2245626-CDS-P-fluviatile_contig8:3478939..34790281622817260.2245626-CDS-P-fluviatile_contig8:3478939..3479028Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3478940..3479028 +
1693571785.8959105-CDS-P-fluviatile_contig8:3478939..34790281693571785.8959105-CDS-P-fluviatile_contig8:3478939..3479028Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3478940..3479028 +
1622817260.2346542-CDS-P-fluviatile_contig8:3480004..34801011622817260.2346542-CDS-P-fluviatile_contig8:3480004..3480101Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3480005..3480101 +
1693571785.9040763-CDS-P-fluviatile_contig8:3480004..34801011693571785.9040763-CDS-P-fluviatile_contig8:3480004..3480101Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3480005..3480101 +
1622817260.2464843-CDS-P-fluviatile_contig8:3481365..34815601622817260.2464843-CDS-P-fluviatile_contig8:3481365..3481560Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3481366..3481560 +
1693571785.9118578-CDS-P-fluviatile_contig8:3481365..34815601693571785.9118578-CDS-P-fluviatile_contig8:3481365..3481560Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3481366..3481560 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14643.1prot_P-fluviatile_contig8.14643.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 3476283..3481560 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14643.1

>prot_P-fluviatile_contig8.14643.1 ID=prot_P-fluviatile_contig8.14643.1|Name=mRNA_P-fluviatile_contig8.14643.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=337bp
MSRRRRSSAAGGMQRVASLLALAVVAGMCSVASCFVISSAAVGRRRHHTD
MMNTHTSTNSARRSINRLEEGGAPGGGGTVRRQRSSSLHAAAAGAQQAGD
GDVSSAATGRSRSEGNAAAGAAAAAAAAVATAWDAEAAAAEGAPSMSSQS
TAPARTEIPTDVAVVGAPQQVVEKEYSIEAILKELAEIQNQGPKNVCVLG
TRHCSYLHQQIIELLAYALVLSGNHVFTSGAMGTNAATIRGALRAERKEL
LTVVLPQSLEKQSPASRELIQKVRNVVTNPINDHLPLDAASRLCNSDLLS
RTEQLICFAFHDSKTIIETTKEARSLNMIVTELYLD*
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mRNA from alignment at P-fluviatile_contig8:3475876..3483353+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14643.1 ID=mRNA_P-fluviatile_contig8.14643.1|Name=mRNA_P-fluviatile_contig8.14643.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7478bp|location=Sequence derived from alignment at P-fluviatile_contig8:3475876..3483353+ (Porterinema fluviatile SAG_2381)
GTTGCACAATCTGTGGCGGGATTCGATCAATCCAAACGCTTGCATACTGC
GAAGCCGGGCGGGTTGAACGGAGGCTTTTAGCAGGTGCGCAGCGGCGAAG
AAAATTGAACGCGGTTTTGCAGACCCCTTCGGTTGTAGTAGAGCCCACAC
CGCCGAACTCCGTTGGAGGCTGAAGGGATGAGCCATGGATCGTGCGCCAG
GCCAAGCGGCACAGATCCTACCGATATCTTCTAGTGGCCGTTGCCATGTC
ATCACATAATCACCACATCAAATTCGACCCCGTTTGCGTATCTCTCGCGC
TCGCTCTCGCCCCCCCTCTTCACATGTTTCCATGATTTGTGTCTGCCTCT
CCAATCAGTAAGAGCAGCAGGGCCAGACGGTCAGAAAGAGAGAGCATTAC
TCCGATCATGAGCCGGCGCAGGAGATCGTCAGCTGCAGGAGGAATGCAGC
GCGTGGCTTCTCTTCTCGCGTTGGCCGTCGTGGCGGGGATGTGCTCGGTA
GCGTCCTGTTTCGTCATTTCGTCCGCGGCGGTCGGCCGGCGGAGACACCA
CACCGATATGATGAACACCCACACCAGCACCAACAGCGCAAGGAGAAGTA
TCAACAGGCTGGAGGAGGGCGGGGCGCCCGGGGGGGGGGGCACGGTAAGG
CGACAGCGATCTTCCAGCCTGCACGCGGCGGCGGCCGGGGCGCAGCAGGC
GGGAGACGGGGACGTTTCTTCGGCGGCTACGGGTAGAAGCCGGTCGGAGG
GAAATGCGGCGGCGGGCGCGGCGGCGGCGGCGGCCGCGGCGGTTGCCACG
GCATGGGATGCAGAAGCAGCAGCAGCAGAAGGAGCGCCATCGATGTCGTC
GCAGTCGACGGCGCCCGCGAGGACCGAGATTCCGACAGACGTTGCTGTCG
TGGGAGCGCCCCAGCAGGTGAGGGGGGTTGGGGCAGCCCAGGCGCTTGTT
TTTCACCCATTCGTGCGGAACTCTTGAAAGTGTTCGGTCAGCCGTCTTGG
TGCCTGCATCTGAGACGAGGCAGCCTACATGGCAGTTTGCGTGCTACTGT
ATCTGGAGCCGGGCATGCGTAGGATGGGTTGGAAAAGGCGTTGCAAGATA
TCATCGGTCGGAAATTGCGGTGCATTCCATCCAAGAATTCAGGAATTCTG
CGCAGTGAAGGGCACTGCCTCACCCACGCACGCTGGTAAATGCCTACATT
TGGGGTGAGCGGCGAGAGTCCAAATAACACAGAGGAAAATGTCTCAGGAA
TGACATCCCGGGCCGAGTGAAAGATTAAAGCTATTGCGGCTTCATTTGGT
TTCGCTTTTCGCGTGTGCCAAGTCTCTTTATCCCGGTTCCTCGCTGGCAT
CTGTTGGACTGACCTTCCGAACACAGTCTTCTTGGAATCTCTCGTTGGCT
CGGCTACGAAAGGCGAGCATCTAGGCTTGTCGTCCACAGGCGGTTGTCTA
TATTTGTTGGGGGAGTGGACTGTTGCTATCCTGAAATTACTGCGAAAGCA
AAGTTCGCGTACACTTGAATCAAAAATAAAGTCGCCGGCGGAGGACAAGC
CTACGAGCATCTCGTTTCCGTCGGACCAGAAGAGGCAAACGGGTTCCATA
ACTGCATAGTACTGGCCCGCTTGGGAGAAGCTGTAAGTTGGGCCGAGCAC
GCGTTTCTGATGTTGAAGCGTTTGACTCTTGCTTTGAATCTAGCATAAAC
GCAACGACTTTTCTAATTTGCTCGGAGAAATCGAGCTTCCGCTTCTCGTA
GCCATGTCTCTCACGAGCGGGCCGGCACTGTACGAAGCGATGGGCACTGT
ACTGAATGTAGGGGCAACACCACATCCATCACCACCCCACCATCATTGCC
ACCAACGACAGCAACGAAGATGTTGACGGCTACCACGACAACGACGACGA
AGACAGTTGTTCGTAACACCCAGGAAACACGCAAAATACTTCCACTGGTT
GAACACCGCGAAGAGCAGACGACGCACCGGAGATGTTAGAAACGTTTTTT
TTTCACCCTCGGGGAGAAAACGAAGAAAATACCACTCCCGCTCGCAACCC
GTGCTCGAGGAAGGCTCGTCTTTTTCGGCAGATACTTTAAGATCGTACTC
CGTAGGCGATTGCCTTATTTTTAAAGGGGGATGGGGGAGATCATACTATC
ATAGGTATATAGTCAAAGTGTACTTAATCGGAAAATTAGTCGCCCAAGGA
GTGTAAGCGTTCATATTTCAGTCACTCTCTGCCGACGACCCATGCTTGCT
CCGTGGTAAGGCGGGTATCGGTCATGGCACGTACGCCAAGACCGCGTTCA
TTGTAAACGGGACGGATTCGGCACTTCTCGACACCTGGAGGTGACCCCTC
GTGAGGCTGTTACTATTCCGCACGTTGCTCCTCAGAGCTAGCACGCTTGT
TTTTGATGCGCAAGCCGGCACGTAGCGCAAACGCCGTGATACCGTTCTTA
CGTTTGGCTTGTCATTTGCCGCTGCTGCTGATGCTGCTGCTGATACGTTT
TGATGCATGCGGACAGGTGGTGGAAAAGGAGTACTCGATCGAGGCGATCC
TTAAGGAGCTCGCCGAGATCCAGAATCAGGGGCCGAAGAACGTCTGTGTC
TTGGGGACTCGACACTGCAGCTACTTGCACCAGCAGGTGACGAATTTCGC
GGCACAGGGCGTGGGTGCTACTGCAGAAAACCGAATATTCCCCGTCACAC
GCGTTGACAGAAATATGCCTGTGTCGGTTACCAGCTGGTGTGGATGGGCC
CGATGCGTATCGAGTTTTCTGTACACAACGGGATACTGCCTCCGGAAGTC
GGCAGTCATTTTGCGCTGCTAATTGCTTTTGCATGCCGGACCACGCTGGC
CTTCCGGAAGGGCAGCAAGCCTCGCGCCGTTGCGCGTTGTGAGGAGGCCC
GACGAGGAAACGCATCTCGGAAAACGTCATATCGGGCCTTCCCTGCATTC
GTCCCGCCAATCTGATACATCGATTCCTGTGTCCGTTCGCGTCGGCGGGG
GAAAGTCAACAGCGTCTTTTGCCCCTTGCACGCACATTGCTCGTCGTCTC
CGTCGTCGCGAAAGATCATCGAGCTGCTGGCTTACGCGTTGGTGTTGAGT
GGAAACCACGTTTTCACCTCGGGGGCCATGGGGACGAATGCCGCCACCAT
AAGGTGCGCTGCTGCGTGTGCTGCGTGCTAGTGTGCTGCGTGCTGCGTGT
GCTGCTTGCTCCCTGTGTCCCACCGCCAGTCGTGTGTTGGACGGTTGAGC
GCTTAAATTTCTGTCGGTTTTTCAGGATGGACCTCCCAAAACCCTGTCCG
CAGCACGACGTACACCTCCTCGTTTTCGTTGAGAGAGCTTCCACCGGGCA
GCTGGGTTCTGGACGAAAGCTTGTGCGTACTTCACGGGTCATACGTCTCC
ACATACGCGCCAAGCGCTACCCCTTTGCAACTGTTTACAGCGCTCTCGTG
ATTTCAAAAGTGCTCTCCTCATTGTTTTGAGTGTTGTTCGAGGCGTCGCT
CACCTTTTTCGGTACATCACGGCGAAAACATCGACGAAAAATCGCCGCTT
GTTTGATGATTGGTCGAAGGCCGTGTGCCGCGTTTTCATGGGAACCCATT
TTTTCTGCCGTCGTATGCCCTTCCGAGTCTTGTCGAACGTCCTTTGCTGC
TTCGTCTAGGGCACTCTTTCGCGTCTGGACGACCGCCCTGTGTTGTCTAG
TCGAAGGCCGCCGTCCGCCCTGGATGGCTTCATGTGGATTTGCTTAAGCG
CTTGCGCCCCCCTCGCTCTCTCGCAGCCTAATGGCCTTGTCATTTGGTTA
ATCGCCCACCCCAATCTGGGTGGTCAGCCACGGCAGTGGCGCTGCGGCAG
CAAACGGGTATGCCAAGGGCACGATGGCGAACTCGCCGCCTTGACTCCAG
CTGTGTCGGAGTGAGCGTGGACAATGCCGAATATTATGGCGTTTTCTCAG
TTTTCTAATTTCCATTCAGCATCCCCGGCAGTCCTGTCCTTGACCACGAA
TTCACGGCGGGTTTCTCTTCTATGATGCGCGTGCGCTATGCCATCGCGGG
AGCCAACAATTTGCGCTTATCTTTCACGATAAATTGAGGATTCTGTTTTC
TCACTTGCTTGACTCGTTGACGGTCCTAGGGGCGCGCTGCGAGCAGAGCG
GAAGGAGCTGTTGACGGTGGTGCTTCCACAAAGCTTGGAAAAGCAAAGCC
CAGCGTCGAGAGAGCTCATACAGAAGGTACGATTCGTCTGGCGATGCTGT
GTGCCAGACGGTACGGCGTTTTTGCTGTGGACCTTGTGCGATATAGCTTC
GACATCGAAGCAGGAAAACTATGTGACGGGATTCAGGGACTCCCACGACG
GACACCTTGCGAAGGTGTTTTTATTTGGCCCGTGTACACGAATACCTAGA
TTATGAATGAATCCATATACGTCACCATTTTGCGTACGTCTTTCGAGTGG
GGAATGGCCGTTCTCTACCTTTGTACAGCATTGGGGAGGGCACTCGGAAC
TGCCGCTTTGTGCTAGACGAGATTGCCGGCATAATTCGCCAGGCTTCTTC
GGCACTTGAGCGAGTTCGGAATCACACAGTTGATGAGACTATTATAGCTC
AAGCCGAACGACTTCGAAGCCTGAAAACTGATTGAACTAGCTCAACATTC
GCGGAAGCGCTACACGGGCGGAGACGCTTTCCAAGCTGCACCACGGACCC
CCCCGAAGTATCTGGCGTCATCCTTCCATCACTGTCCTGCCACGACTCCA
GTCGCTATCGACCACGTTTCTCGGCCGCCACCCCACCCGCCTGAGACTGC
CATGTCAGCTGCCAGTCACCGTGCGCCCCTTCTTCCGTTTCCCTTCCGTC
CTCACGATTCCAGAAGATACCACGGCAAGCTGTGCGGATGCCGTTACTTT
CCCATGCATTTCGCCCCGCTGTACCTTTCGCCGCTTCTCCCCGCCGTTTT
GGAATCTCGTCGATGGAGCAGAACCAACCAATCGATGAATAACGAACTTC
CAACTGCCCATTCCCGCGAGGCGCCGCGCCCGCCATCAGCTCAATAATGT
CGACATCTCGTCCCTCAATCTTTCTGCTCCTGCCAAAAGCCGCTCGCTAT
CTCTTCCCCTCTCGTTCCACCCACTCGCCCACCCTTTTCCGATCCGGACA
GTTACTGCCTCCACGCCTTGTGGTCACTCACTTGTCTCCTTCAGTCATGC
CGTTGCCTTCATCCCACCGTCGTGCCCGTCGTGCCGTCGCCTAACGTTTA
TCGTGGTCCCCCACGCCTAGTCCTTTCATCGTGTGCAGGGTGAACGGATA
ATTATGATGATGTTGTCTGCTGCGAGCTCATTTGCGTCCTTCTGTCTGAT
GGTTGCGTTTGACTTGCGGTCGTGCCTGTAGTGATGTCGCCTATCTTCAT
CGTGGTCCCCCGCGTCTTGTCCTCGAACCGCATGCGGGGTGGACGGATAA
TCACGATTATGTCGTGTGGTAATTCGTTTGCCCTCTTCAGGTGCGGAACG
TGGTGACAAACCCGATCAACGACCACCTCCCCCTGGATGCGGCGTCCCGG
CTATGCAACTCGGACCTGCTGTCGCGAACGGAGCAGCTCATCTGCTTCGC
CTTCCACGACTCCAAGACCATCATCGAGACCACCAAGGAGGCGAGGTCCC
TCAACATGATCGTCACCGAGTTGTACCTCGACTGACCAGCCGACACACGT
TGTTTGATTTCTCCTCTTCTACGCTCTGCAATATCCGCGAGCGTGGGGAT
GCATGACCCTGGACAACGTTGCTGGCGTGACGGCACTTGCCCTGAATTGG
AGCTGCTTCGGTTTTATGTTCGAGGTCGTTGGCCGTTTTCTGTAGGCCGT
TTTTTGCGTTGCCTGACTGACCACAAAACGCGTTAGTTTTTCAGACATGT
TTTGTTCGTGTTGCGCTCGCTGAGGTAGATTAGGCTAGGCTAGGCTAGGC
ACGGCTATATATAGGCTGGGCCAGGCCAGGTCAGGCTAGGCCAGGCTGGG
CCAGATTAGGCAGGTCAGGTTAGGCTTGGCCTGTTTGGGACATTCTTGCG
ACGTTGGTTTGCGAAGACCTCATACAGGCAGGAAAATGGAAGCCGTTGAT
GATATCGAGCCGTTACGTGTCCACTCCTTGCCTGCTCCCGCTTCATGTGT
AGAGCCCACATCATTATGGCTCGTGTTCAGCCGGTTTCTGCGCGAATCTG
GTCGGGTCGAGGCTTCTGTTGATCACCCATAGGTTTCGTTCTGAATGAAA
AAGGCCGTATCGGTTGGGTTCTCAGGAAGCTACCGCCCCCACCATCCTTT
GCGGACACTGTACGAACGAGCTCGGGATTCTTAGGAGCTGTTACTCGTGT
ACATGACGCTGGTCACCGGATTGGCTCGGCTTCGCTGCAATGCCAAGAGC
AGTTGTGAATGTATAAGGCCGTCGACTGTCCAGTCATGTGTGATACCCGC
GCCACCGCCTCGCAGCTCTGATCGACCAGGTTCTCTTGTTTCAGGGCTCC
CAACGGGTGTGGGGGCATGGTATATCTACTTGGAGATTATTTTGTAACAA
CGGAGTGTTGTTGCGGCCGGTGGGCTGGCTCCAGCCGGGCAGGGCGCACT
AAGTTGGGGCACTGGAACGTCATCCTGCCTTCCTTGGCCTTGAATGCAGG
AACTCTACTTTTCGCAACCTTGAATGTTGCAGGCCGTAGTTCTTGGGGGG
GGAAGGTTGCGCGCACTCTGAGTTGGCGGCTGGTGTTCGTATTTGTGGGT
GATCTGTCCTGATGCGGATGCTGCTGCGAATGCCGCGACTTGTTTTTCTC
CTTTCTTTTGGCTAACAACAGAGGACTTCGGTCTCCGAAACGGGTCTGCT
GCTGCGTGCTTATTTGCCTTGGTGTCGATGTAGTGCACGGGATGGCGTGA
GCGATGGTGCATGCACAAGGGAGCTTTCCGTGGATCGGAACAGTGGGGAA
AAATGATGAGGCAGAAAGAGCAGGAGCAATTTTACACCAGGTTGACCTAC
TGGTATTGGGTCTTTTTTTTTAAGAAGAGCCCTGTAGATAAACAAGATTG
CCAGCTCTTGGTGATGGTTCGGTTCCCGCTCAGCCACTCCTCTCAGGAGG
AAGGTTCGTGATCCACAACGTCGGAGGGAGGGGGTAGTATATCAGGGCGA
CAGGGTCAGGGAAGTTGAAAGACAATTGGCCCCGGTCTTTATTTAATGGG
GGAAAGAAGGGGATACAGGCAGAACCCAACGGTCTTCATACAAGGACAAC
CTTGTGGCTCTCCTTCCTACCTGCAGCCGCTTTCTTCCTGGATTGCCCTT
CCTCAGCGCGGGCGCCGGCGTTGTGGTGTGTACCGTATTCAAGCAGCCGG
CCGGCTACCCAGTCAAGTCATGATGGTTGGTTTGCTTCGTGGAGCAGTAC
TTAGCGGGTCATTGCAGGGAAAGAGGGGAAACTAGACGGCGCGAGAGACT
AATAGAGAAGAGACAGGTGTCCTCGGCC
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:3475876..3483353+

>mRNA_P-fluviatile_contig8.14643.1 ID=mRNA_P-fluviatile_contig8.14643.1|Name=mRNA_P-fluviatile_contig8.14643.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2022bp|location=Sequence derived from alignment at P-fluviatile_contig8:3475876..3483353+ (Porterinema fluviatile SAG_2381)
ATGAGCCGGCGCAGGAGATCGTCAGCTGCAGGAGGAATGCAGCGCGTGGC
TTCTCTTCTCGCGTTGGCCGTCGTGGCGGGGATGTGCTCGGTAGCGTCCT
GTTTCGTCATTTCGTCCGCGGCGGTCGGCCGGCGGAGACACCACACCGAT
ATGATGAACACCCACACCAGCACCAACAGCGCAAGGAGAAGTATCAACAG
GCTGGAGGAGGGCGGGGCGCCCGGGGGGGGGGGCACGGTAAGGCGACAGC
GATCTTCCAGCCTGCACGCGGCGGCGGCCGGGGCGCAGCAGGCGGGAGAC
GGGGACGTTTCTTCGGCGGCTACGGGTAGAAGCCGGTCGGAGGGAAATGC
GGCGGCGGGCGCGGCGGCGGCGGCGGCCGCGGCGGTTGCCACGGCATGGG
ATGCAGAAGCAGCAGCAGCAGAAGGAGCGCCATCGATGTCGTCGCAGTCG
ACGGCGCCCGCGAGGACCGAGATTCCGACAGACGTTGCTGTCGTGGGAGC
GCCCCAGCAGATGAGCCGGCGCAGGAGATCGTCAGCTGCAGGAGGAATGC
AGCGCGTGGCTTCTCTTCTCGCGTTGGCCGTCGTGGCGGGGATGTGCTCG
GTAGCGTCCTGTTTCGTCATTTCGTCCGCGGCGGTCGGCCGGCGGAGACA
CCACACCGATATGATGAACACCCACACCAGCACCAACAGCGCAAGGAGAA
GTATCAACAGGCTGGAGGAGGGCGGGGCGCCCGGGGGGGGGGGCACGGTA
AGGCGACAGCGATCTTCCAGCCTGCACGCGGCGGCGGCCGGGGCGCAGCA
GGCGGGAGACGGGGACGTTTCTTCGGCGGCTACGGGTAGAAGCCGGTCGG
AGGGAAATGCGGCGGCGGGCGCGGCGGCGGCGGCGGCCGCGGCGGTTGCC
ACGGCATGGGATGCAGAAGCAGCAGCAGCAGAAGGAGCGCCATCGATGTC
GTCGCAGTCGACGGCGCCCGCGAGGACCGAGATTCCGACAGACGTTGCTG
TCGTGGGAGCGCCCCAGCAGGTGGTGGAAAAGGAGTACTCGATCGAGGCG
ATCCTTAAGGAGCTCGCCGAGATCCAGAATCAGGGGCCGAAGAACGTCTG
TGTCTTGGGGACTCGACACTGCAGCTACTTGCACCAGCAGGTGGTGGAAA
AGGAGTACTCGATCGAGGCGATCCTTAAGGAGCTCGCCGAGATCCAGAAT
CAGGGGCCGAAGAACGTCTGTGTCTTGGGGACTCGACACTGCAGCTACTT
GCACCAGCAGATCATCGAGCTGCTGGCTTACGCGTTGGTGTTGAGTGGAA
ACCACGTTTTCACCTCGGGGGCCATGGGGACGAATGCCGCCACCATAAGA
TCATCGAGCTGCTGGCTTACGCGTTGGTGTTGAGTGGAAACCACGTTTTC
ACCTCGGGGGCCATGGGGACGAATGCCGCCACCATAAGGGGCGCGCTGCG
AGCAGAGCGGAAGGAGCTGTTGACGGTGGTGCTTCCACAAAGCTTGGAAA
AGCAAAGCCCAGCGTCGAGAGAGCTCATACAGAAGGGGCGCGCTGCGAGC
AGAGCGGAAGGAGCTGTTGACGGTGGTGCTTCCACAAAGCTTGGAAAAGC
AAAGCCCAGCGTCGAGAGAGCTCATACAGAAGGTGCGGAACGTGGTGACA
AACCCGATCAACGACCACCTCCCCCTGGATGCGGCGTCCCGGCTATGCAA
CTCGGACCTGCTGTCGCGAACGGAGCAGCTCATCTGCTTCGCCTTCCACG
ACTCCAAGACCATCATCGAGACCACCAAGGAGGCGAGGTCCCTCAACATG
ATCGTCACCGAGTTGTACCTCGACTGAGTGCGGAACGTGGTGACAAACCC
GATCAACGACCACCTCCCCCTGGATGCGGCGTCCCGGCTATGCAACTCGG
ACCTGCTGTCGCGAACGGAGCAGCTCATCTGCTTCGCCTTCCACGACTCC
AAGACCATCATCGAGACCACCAAGGAGGCGAGGTCCCTCAACATGATCGT
CACCGAGTTGTACCTCGACTGA
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