mRNA_P-fluviatile_contig8.14635.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14635.1
Unique NamemRNA_P-fluviatile_contig8.14635.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig8.14635.1 vs. uniprot
Match: D8LKX6_ECTSI (Similar to ubiquitin specific protease 48 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKX6_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 2.040e-83
Identity = 146/197 (74.11%), Postives = 158/197 (80.20%), Query Frame = 3 
Query:  972 PPPLRTLVQDTFCGEVAYVTRCLTCKGGPRHQRTFNDLVLQINKHRTVEAILDGHLEHEILDGSNQYNCENCGKKQDAVTMTELVRLPPVLSLQLVRYDYDSKTMEKKKIKAAVSLPPTLDMGPRLGPQGDKEAAGXXXXXXXXXXAADVSPKGSGGAHGGSSKRGDEFVYDLRCVLYHKGSNVHSGHIVAEVHDPD 1562
            P PLRTLVQDTFCGEVAY+TRCL CK GPR QRTFNDLVLQIN HR++E ILDGHLEHEIL G+NQYNCE CGKKQDA TMTELVRLPPVLSLQLVRY+YD KTM KKKIKAA+SLPPTLDMGPRLGP+GD    G             VSPKG  G++G      +E+VY+LRCVLYHKGSNVHSGHIVAE  D D
Sbjct:  262 PTPLRTLVQDTFCGEVAYITRCLKCKAGPRQQRTFNDLVLQINHHRSIETILDGHLEHEILVGANQYNCEKCGKKQDAETMTELVRLPPVLSLQLVRYEYDLKTMAKKKIKAAISLPPTLDMGPRLGPRGDGSKVGGGERGKG------VSPKGGKGSNGDDD---EEYVYELRCVLYHKGSNVHSGHIVAEADDSD 449
[Close]
BLAST of mRNA_P-fluviatile_contig8.14635.1 vs. uniprot
Match: A0A511KGW2_RHOTO (Ubiquitin carboxyl-terminal hydrolase 48 n=1 Tax=Rhodosporidium toruloides TaxID=5286 RepID=A0A511KGW2_RHOTO)

HSP 1 Score: 144 bits (364), Expect = 9.220e-33
Identity = 82/210 (39.05%), Postives = 110/210 (52.38%), Query Frame = 3 
Query:  990 LVQDTFCGEVAYVTRCLTCKGGPRHQRTFNDLVLQINKHRTVEAILDGHLEHEILDGSNQYNCENCGKKQDAVTMTELVRLPPVLSLQLVRYDYDSKTMEKKKIKAAVSLPPTLDMGPRLGPQGDKEAAGXXXXXXXXXXAADVSPKGSGGAHGGSSKRGDEFVYDLRCVLYHKGSNVHSGHIVAEVHDPDRDTWTLFDDETVRDIPGVN 1619
            LV + F G + Y T+CL+CK    H  TF +L + + K+  +E  +   LE E L+G NQY CE CGKK+DA+  TEL  LPPVL + L+R+ +D  T E+ K + A++ P  +DMG  L                        SP   G  H        E  YDL+ VL HKG + H GH VA+V+D  +  W LFDDETV  I  +N
Sbjct:  288 LVAEQFGGRITYGTQCLSCKSKSAHPSTFFELEVNLTKNCKLEDRIKASLESEKLEGDNQYFCETCGKKRDAMRYTELAELPPVLHVSLLRFVWDMVTGERSKSQHAMTYPLQIDMGQFL------------------------SPDAYGNKH--------ELWYDLKGVLMHKGVSAHHGHYVAQVYDESQSKWFLFDDETVTPIDDLN 465
[Close]
BLAST of mRNA_P-fluviatile_contig8.14635.1 vs. uniprot
Match: A0A0K3CHG9_RHOTO (Ubiquitinyl hydrolase 1 n=3 Tax=Rhodosporidium toruloides TaxID=5286 RepID=A0A0K3CHG9_RHOTO)

HSP 1 Score: 141 bits (355), Expect = 1.280e-31
Identity = 81/210 (38.57%), Postives = 113/210 (53.81%), Query Frame = 3 
Query:  990 LVQDTFCGEVAYVTRCLTCKGGPRHQRTFNDLVLQINKHRTVEAILDGHLEHEILDGSNQYNCENCGKKQDAVTMTELVRLPPVLSLQLVRYDYDSKTMEKKKIKAAVSLPPTLDMGPRLGPQGDKEAAGXXXXXXXXXXAADVSPKGSGGAHGGSSKRGDEFVYDLRCVLYHKGSNVHSGHIVAEVHDPDRDTWTLFDDETVRDIPGVN 1619
            LV + F G + Y T+CL+CK    H  TF +L + + K+  +E  +   L  E L+G NQY CENCGKK+DA+  TEL  LPPVL + L+R+ +D +T E+ K + A++ P  +DMG  L     ++A G                          +KR  E  YDL+ VL HKG + H GH VA+V+D  +  W LFDDE V  I  +N
Sbjct:  288 LVDEQFGGRITYGTQCLSCKNKSAHPSTFFELEVNLTKNCKLEDRIAASLASEKLEGDNQYFCENCGKKRDALRYTELAELPPVLHVSLLRFVWDMETGERSKSQHAMTYPLQIDMGQYL----PRDAQG--------------------------NKR--EVWYDLKGVLMHKGVSAHHGHYVAQVYDESQSKWFLFDDEAVSPIDDLN 465
[Close]
BLAST of mRNA_P-fluviatile_contig8.14635.1 vs. uniprot
Match: A0A5E4NJ67_9HEMI (Ubiquitinyl hydrolase 1 n=1 Tax=Cinara cedri TaxID=506608 RepID=A0A5E4NJ67_9HEMI)

HSP 1 Score: 135 bits (340), Expect = 9.840e-30
Identity = 78/211 (36.97%), Postives = 106/211 (50.24%), Query Frame = 3 
Query:  981 LRTLVQDTFCGEVAYVTRCLTCKGGPRHQRTFNDLVLQINKHRTVEAILDGHLEHEILDGSNQYNCENCGKKQDAVTMTELVRLPPVLSLQLVRYDYDSKTMEKKKIKAAVSLPPTLDMGPRLGPQGDKEAAGXXXXXXXXXXAADVSPKGSGGAHGGSSKRGDEFVYDLRCVLYHKGSNVHSGHIVAEVHDPDRDTWTLFDDETVRDIPG 1613
            +R +V+D F GE  YVT C  CK       TF +L L I  H+T+   L   L+ E L G +QY C++CG KQDAV    L  LPPVL++QL+R+ YD +TM+KKK+   +    TLDM   L      +                            SSK  D ++Y+L  VL HKGS+ +SGH VA + D   + W   +DE V  + G
Sbjct:  207 VRDMVKDNFLGEYKYVTTCSKCKTKSTRPSTFYELDLNIKGHKTLNDSLQEFLKEEHLTGDDQYYCDHCGSKQDAVRKICLTALPPVLNIQLMRFVYDRQTMQKKKLNTYLQFSQTLDMAQYLNLSNQLDE---------------------------SSK--DSYMYNLCAVLIHKGSSAYSGHYVAHIKDIAAEEWYKINDENVEKLKG 388
[Close]
BLAST of mRNA_P-fluviatile_contig8.14635.1 vs. uniprot
Match: UPI001B8883EE (ubiquitin carboxyl-terminal hydrolase 48-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B8883EE)

HSP 1 Score: 135 bits (339), Expect = 1.230e-29
Identity = 73/213 (34.27%), Postives = 105/213 (49.30%), Query Frame = 3 
Query:  975 PPLRTLVQDTFCGEVAYVTRCLTCKGGPRHQRTFNDLVLQINKHRTVEAILDGHLEHEILDGSNQYNCENCGKKQDAVTMTELVRLPPVLSLQLVRYDYDSKTMEKKKIKAAVSLPPTLDMGPRLGPQGDKEAAGXXXXXXXXXXAADVSPKGSGGAHGGSSKRGDEFVYDLRCVLYHKGSNVHSGHIVAEVHDPDRDTWTLFDDETVRDIPG 1613
            P +  +VQ  FCG+  YVT C  C    R    F +L L I  H+T++A L+  L+ E L+G NQY C  C  KQ+A  + +L  LPPVLSLQL+R+ +D K+  KKK+ + +  P  LDM   LG                                    K  +  ++DL  VL H+G + +SGH VA + D  ++TW  F+DE +  + G
Sbjct:  196 PDVPNIVQKQFCGQYCYVTSCKHCGNQSRTASKFYELDLSIKGHKTLKASLEDFLQEEKLEGENQYMCSMCNSKQNASRVIQLDYLPPVLSLQLLRFVFDKKSGHKKKLNSFIQFPQVLDMSKYLG------------------------------------KPENSVLFDLTAVLIHRGPSAYSGHYVAHIQDTQQETWYKFNDEEIEQMKG 372
[Close]
BLAST of mRNA_P-fluviatile_contig8.14635.1 vs. uniprot
Match: J9KA43_ACYPI (Ubiquitinyl hydrolase 1 n=12 Tax=Aphidinae TaxID=133076 RepID=J9KA43_ACYPI)

HSP 1 Score: 133 bits (334), Expect = 5.780e-29
Identity = 77/211 (36.49%), Postives = 104/211 (49.29%), Query Frame = 3 
Query:  981 LRTLVQDTFCGEVAYVTRCLTCKGGPRHQRTFNDLVLQINKHRTVEAILDGHLEHEILDGSNQYNCENCGKKQDAVTMTELVRLPPVLSLQLVRYDYDSKTMEKKKIKAAVSLPPTLDMGPRLGPQGDKEAAGXXXXXXXXXXAADVSPKGSGGAHGGSSKRGDEFVYDLRCVLYHKGSNVHSGHIVAEVHDPDRDTWTLFDDETVRDIPG 1613
            +R +V+D F GE  YVT CL CK       TF +L L I  H+T+   L   L+ E L G +QY C++C  KQDAV    L  LPPVL++QL+R+ YD +TM+KKK+   +    TLDM   L                      D S K             +  +Y+L  VL HKGS+ +SGH VA + D   + W   +DE V  + G
Sbjct:  207 VRDMVRDNFLGEYKYVTTCLKCKTKSTRPSTFYELDLNIKGHKTLNESLQEFLKEEHLTGDDQYYCDHCNCKQDAVRKICLTTLPPVLNIQLMRFVYDRQTMQKKKLNTYIQFSQTLDMAQYLN----------------LPVELDESSK-------------ENHIYNLCAVLIHKGSSAYSGHYVAHIKDIAAEEWYKMNDENVEKLKG 388
[Close]
BLAST of mRNA_P-fluviatile_contig8.14635.1 vs. uniprot
Match: UPI0003F06BA1 (ubiquitin carboxyl-terminal hydrolase 48-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F06BA1)

HSP 1 Score: 131 bits (329), Expect = 2.160e-28
Identity = 76/214 (35.51%), Postives = 107/214 (50.00%), Query Frame = 3 
Query:  981 LRTLVQDTFCGEVAYVTRCLTCKGGPRHQRTFNDLVLQINKHRTVEAILDGHLEHEILDGSNQYNCENCG-KKQDAVTMTELVRLPPVLSLQLVRYDYDSKTMEKKKIKAAVSLPPTLDMGPRLGPQGDKEAAGXXXXXXXXXXAADVSPKGSGGAHGGSSKRGDEFVYDLRCVLYHKGSNVHSGHIVAEVHDPDRDTWTLFDDETVRDIPGVN 1619
            +R ++Q  FCGE AYVTRC TC G  +    F +L L I  H+ +   L   L+ E L+GSNQY CE C   KQ+A    +L  LPPVL+LQL+R+ +D  T  KKK+ + +  P  LDM P L  Q                                  +R  + +YDL  VL H G + +SGH +A + D +  +W  F+DE ++ + G N
Sbjct:  296 VRNVIQQQFCGEYAYVTRCNTCGGISQRPSRFYELDLNIQGHKELSECLQEFLQVEKLEGSNQYLCERCHFTKQNASRRIQLHTLPPVLNLQLLRFIFDRNTGHKKKLNSYIQFPEVLDMTPYLVTQ----------------------------------ER--QVIYDLSAVLIHTGPSAYSGHYIAHIKDKNTGSWYKFNDEEIKKMEGKN 473
[Close]
BLAST of mRNA_P-fluviatile_contig8.14635.1 vs. uniprot
Match: UPI000854FCBF (ubiquitin carboxyl-terminal hydrolase 48 n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854FCBF)

HSP 1 Score: 130 bits (327), Expect = 3.710e-28
Identity = 72/213 (33.80%), Postives = 104/213 (48.83%), Query Frame = 3 
Query:  975 PPLRTLVQDTFCGEVAYVTRCLTCKGGPRHQRTFNDLVLQINKHRTVEAILDGHLEHEILDGSNQYNCENCGKKQDAVTMTELVRLPPVLSLQLVRYDYDSKTMEKKKIKAAVSLPPTLDMGPRLGPQGDKEAAGXXXXXXXXXXAADVSPKGSGGAHGGSSKRGDEFVYDLRCVLYHKGSNVHSGHIVAEVHDPDRDTWTLFDDETVRDIPG 1613
            P +R ++ D FCG+ AYVT C  C    +    F +L L I  H+ +   +   L+ E L+G N+Y CE C  KQ+A     LV+LPP L+LQL+R+ +D +T  KKK+   ++   TLDMGP +      E AG                                +VY+L  VL H+G + +SGH +A V DP    W  F+DE +  + G
Sbjct:  203 PDVRNIIHDQFCGQYAYVTICSHCGRESKLVSKFYELELNIQGHKQLTDCVTEFLKEEKLEGDNRYFCETCQSKQNATRKIRLVKLPPTLNLQLMRFVFDRQTGHKKKLNTYIAFSETLDMGPFV------ELAGG------------------------------NYVYELTAVLIHRGVSAYSGHYIAHVRDPQTSEWYKFNDEEIEKMEG 379
[Close]
BLAST of mRNA_P-fluviatile_contig8.14635.1 vs. uniprot
Match: UPI001AAC98C6 (ubiquitin carboxyl-terminal hydrolase 48 n=1 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAC98C6)

HSP 1 Score: 130 bits (327), Expect = 3.930e-28
Identity = 70/213 (32.86%), Postives = 103/213 (48.36%), Query Frame = 3 
Query:  975 PPLRTLVQDTFCGEVAYVTRCLTCKGGPRHQRTFNDLVLQINKHRTVEAILDGHLEHEILDGSNQYNCENCGKKQDAVTMTELVRLPPVLSLQLVRYDYDSKTMEKKKIKAAVSLPPTLDMGPRLGPQGDKEAAGXXXXXXXXXXAADVSPKGSGGAHGGSSKRGDEFVYDLRCVLYHKGSNVHSGHIVAEVHDPDRDTWTLFDDETVRDIPG 1613
            P +R ++QD FCG+ AYVT C  C    +    F +L L I  H+ +   +   L+ E L+G N+Y CE C  KQ+A     LV+LPP L+LQL+R+ +D +T  KKK+   ++   TLDMGP +                                     + G  + Y+L  VL H+G + +SGH +A V DP    W  F+DE +  + G
Sbjct:  203 PDVRNIIQDQFCGQYAYVTICSHCGRESKLVSKFYELELNIQGHKQLTDCVTEFLKEEKLEGDNRYFCETCQTKQNATRKIRLVKLPPTLNLQLMRFVFDRQTGHKKKLNTYIAFSETLDMGPFV------------------------------------EQPGSNYSYELTAVLIHRGVSAYSGHYIAHVRDPHTSEWYKFNDEEIEKMEG 379
[Close]
BLAST of mRNA_P-fluviatile_contig8.14635.1 vs. uniprot
Match: UPI0018D7620B (ubiquitin carboxyl-terminal hydrolase 48-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D7620B)

HSP 1 Score: 130 bits (327), Expect = 3.940e-28
Identity = 75/215 (34.88%), Postives = 104/215 (48.37%), Query Frame = 3 
Query:  975 PPLRTLVQDTFCGEVAYVTRCLTCKGGPRHQRTFNDLVLQINKHRTVEAILDGHLEHEILDGSNQYNCENCGKKQDAVTMTELVRLPPVLSLQLVRYDYDSKTMEKKKIKAAVSLPPTLDMGPRLGPQGDKEAAGXXXXXXXXXXAADVSPKGSGGAHGGSSKRGDEFVYDLRCVLYHKGSNVHSGHIVAEVHDPDRDTWTLFDDETVRDIPGVN 1619
            P +R ++Q  FCG+ AYVTRC  C         F +L L I  HR +   L   L+ E L+G+NQY C+ CG KQ+A    +L++LPPVL++QL+R+ +D ++  KKK+ + +  P  LDM   L P  D E                                    VYD+  VL H+G   +SGH VA V     + W  F+DE V  I G N
Sbjct:  207 PDVRNIIQHQFCGQYAYVTRCNNCGHSSERPSKFYELDLNIKGHRELSESLGEFLQDEHLEGANQYFCDTCGSKQNATRRIQLLQLPPVLNIQLLRFVFDRQSGTKKKLNSFIQFPEVLDMTQYL-PMNDVET-----------------------------------VYDMTAVLIHRGPTAYSGHYVAHVRQ--EEAWHKFNDEEVERIEGRN 383
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKX6_ECTSI2.040e-8374.11Similar to ubiquitin specific protease 48 n=1 Tax=... [more]
A0A511KGW2_RHOTO9.220e-3339.05Ubiquitin carboxyl-terminal hydrolase 48 n=1 Tax=R... [more]
A0A0K3CHG9_RHOTO1.280e-3138.57Ubiquitinyl hydrolase 1 n=3 Tax=Rhodosporidium tor... [more]
A0A5E4NJ67_9HEMI9.840e-3036.97Ubiquitinyl hydrolase 1 n=1 Tax=Cinara cedri TaxID... [more]
UPI001B8883EE1.230e-2934.27ubiquitin carboxyl-terminal hydrolase 48-like isof... [more]
J9KA43_ACYPI5.780e-2936.49Ubiquitinyl hydrolase 1 n=12 Tax=Aphidinae TaxID=1... [more]
UPI0003F06BA12.160e-2835.51ubiquitin carboxyl-terminal hydrolase 48-like n=1 ... [more]
UPI000854FCBF3.710e-2833.80ubiquitin carboxyl-terminal hydrolase 48 n=1 Tax=N... [more]
UPI001AAC98C63.930e-2832.86ubiquitin carboxyl-terminal hydrolase 48 n=1 Tax=R... [more]
UPI0018D7620B3.940e-2834.88ubiquitin carboxyl-terminal hydrolase 48-like n=1 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3397286..3407885 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score266.5
Seed ortholog evalue1.9e-68
Seed eggNOG ortholog2880.D8LKX6
Preferred nameUSP48
KEGG koko:K02911,ko:K06255,ko:K11858
KEGG Pathwayko03010,ko04512,ko05161,ko05205,map03010,map04512,map05161,map05205
KEGG ModuleM00178
GOsGO:0000003,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0007275,GO:0008150,GO:0009791,GO:0010154,GO:0016020,GO:0022414,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044464,GO:0045121,GO:0045202,GO:0045211,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0061458,GO:0070013,GO:0071944,GO:0097060,GO:0098589,GO:0098590,GO:0098794,GO:0098805,GO:0098857
EggNOG free text desc.ubiquitinyl hydrolase activity
EggNOG OGsCOG5077@1,KOG1863@2759
EC3.4.19.12
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko00535,ko01000,ko01002,ko03011,ko03029,ko04121,ko04147,ko04516
Hectar predicted targeting categoryother localisation
Exons11
Model size1648
Cds size1200
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817259.1307764-UTR-P-fluviatile_contig8:3397285..33973861622817259.1307764-UTR-P-fluviatile_contig8:3397285..3397386Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3397286..3397386 -
1693571771.528298-UTR-P-fluviatile_contig8:3397285..33973861693571771.528298-UTR-P-fluviatile_contig8:3397285..3397386Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3397286..3397386 -
1622817259.141959-UTR-P-fluviatile_contig8:3398966..33991621622817259.141959-UTR-P-fluviatile_contig8:3398966..3399162Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3398967..3399162 -
1693571771.543719-UTR-P-fluviatile_contig8:3398966..33991621693571771.543719-UTR-P-fluviatile_contig8:3398966..3399162Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3398967..3399162 -
1622817259.151639-UTR-P-fluviatile_contig8:3399429..33995711622817259.151639-UTR-P-fluviatile_contig8:3399429..3399571Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3399430..3399571 -
1693571771.8310173-UTR-P-fluviatile_contig8:3399429..33995711693571771.8310173-UTR-P-fluviatile_contig8:3399429..3399571Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3399430..3399571 -
1622817259.2780347-UTR-P-fluviatile_contig8:3407876..34078851622817259.2780347-UTR-P-fluviatile_contig8:3407876..3407885Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3407877..3407885 -
1693571771.938451-UTR-P-fluviatile_contig8:3407876..34078851693571771.938451-UTR-P-fluviatile_contig8:3407876..3407885Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3407877..3407885 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817259.1638892-CDS-P-fluviatile_contig8:3399571..33996111622817259.1638892-CDS-P-fluviatile_contig8:3399571..3399611Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3399572..3399611 -
1693571771.84448-CDS-P-fluviatile_contig8:3399571..33996111693571771.84448-CDS-P-fluviatile_contig8:3399571..3399611Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3399572..3399611 -
1622817259.1783671-CDS-P-fluviatile_contig8:3400507..34005761622817259.1783671-CDS-P-fluviatile_contig8:3400507..3400576Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3400508..3400576 -
1693571771.8544056-CDS-P-fluviatile_contig8:3400507..34005761693571771.8544056-CDS-P-fluviatile_contig8:3400507..3400576Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3400508..3400576 -
1622817259.1887639-CDS-P-fluviatile_contig8:3401052..34012311622817259.1887639-CDS-P-fluviatile_contig8:3401052..3401231Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3401053..3401231 -
1693571771.8644552-CDS-P-fluviatile_contig8:3401052..34012311693571771.8644552-CDS-P-fluviatile_contig8:3401052..3401231Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3401053..3401231 -
1622817259.1989803-CDS-P-fluviatile_contig8:3401693..34018041622817259.1989803-CDS-P-fluviatile_contig8:3401693..3401804Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3401694..3401804 -
1693571771.875074-CDS-P-fluviatile_contig8:3401693..34018041693571771.875074-CDS-P-fluviatile_contig8:3401693..3401804Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3401694..3401804 -
1622817259.2125595-CDS-P-fluviatile_contig8:3402491..34026221622817259.2125595-CDS-P-fluviatile_contig8:3402491..3402622Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3402492..3402622 -
1693571771.887159-CDS-P-fluviatile_contig8:3402491..34026221693571771.887159-CDS-P-fluviatile_contig8:3402491..3402622Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3402492..3402622 -
1622817259.22655-CDS-P-fluviatile_contig8:3403013..34033861622817259.22655-CDS-P-fluviatile_contig8:3403013..3403386Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3403014..3403386 -
1693571771.898531-CDS-P-fluviatile_contig8:3403013..34033861693571771.898531-CDS-P-fluviatile_contig8:3403013..3403386Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3403014..3403386 -
1622817259.2393312-CDS-P-fluviatile_contig8:3404813..34048811622817259.2393312-CDS-P-fluviatile_contig8:3404813..3404881Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3404814..3404881 -
1693571771.9086425-CDS-P-fluviatile_contig8:3404813..34048811693571771.9086425-CDS-P-fluviatile_contig8:3404813..3404881Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3404814..3404881 -
1622817259.2540667-CDS-P-fluviatile_contig8:3406040..34061101622817259.2540667-CDS-P-fluviatile_contig8:3406040..3406110Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3406041..3406110 -
1693571771.919974-CDS-P-fluviatile_contig8:3406040..34061101693571771.919974-CDS-P-fluviatile_contig8:3406040..3406110Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3406041..3406110 -
1622817259.2667372-CDS-P-fluviatile_contig8:3407717..34078761622817259.2667372-CDS-P-fluviatile_contig8:3407717..3407876Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3407718..3407876 -
1693571771.9287608-CDS-P-fluviatile_contig8:3407717..34078761693571771.9287608-CDS-P-fluviatile_contig8:3407717..3407876Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3407718..3407876 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14635.1prot_P-fluviatile_contig8.14635.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 3399572..3407876 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14635.1

>prot_P-fluviatile_contig8.14635.1 ID=prot_P-fluviatile_contig8.14635.1|Name=mRNA_P-fluviatile_contig8.14635.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=400bp
MHGRRGTRRSSRVESPGDDGQGLVEVVSIQRKRPRQQQTKSTVADRHAAL
EEHMRREASDPYHVCAPDLYPRCTRQDHLRKKNCSKNPRCLYGLGEGKEG
IWSARPALITQLGEDMSGVLKDGLSPHFEAGEATTGGAKSATSATGDAAA
TSTRHPRRLLPTGLRNLGATCYLNSQLQALFANKVFRDGVFSWRPSTGST
AAAAAEAAAATAAGARRLFNRGGGGGMGGAGSAGVGSGAAANGGDGGAAC
EAIEAAMNEQVDDAIMRELQLVFAHMQEGAAKVYDPSGFPALLRMDTGSQ
QDPQEFSNFFRILLERCFQRSPPPSGLWCRTRSAVRLRTSPAASRARVGL
GISEPSTTSSSRSTNTGRLKRSSTATWNTKSWTAPISTTARTAARNRTP*
back to top

mRNA from alignment at P-fluviatile_contig8:3397286..3407885-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14635.1 ID=mRNA_P-fluviatile_contig8.14635.1|Name=mRNA_P-fluviatile_contig8.14635.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10600bp|location=Sequence derived from alignment at P-fluviatile_contig8:3397286..3407885- (Porterinema fluviatile SAG_2381)
GCTAGAGGGATGCATGGCAGGAGAGGAACGCGTCGTTCCTCCAGGGTTGA
ATCTCCAGGGGATGATGGGCAGGGCTTGGTCGAGGTTGTATCGATCCAGA
GAAAACGTCCCAGGCAGCAGCAGACAAAGAGCACGGTTGCTGATCGACAT
GCCGCCCTCGAAGAACATGTGAGCACTAGAGACAAAGAGGGAGGAGATGT
GAGGCCGAAATCGAGCGAGAAAGAAGGCGTGGGAAGCACGCAAGATATGC
CACCCTTTGCAAATGAAGTCACACATCCATCTGCCTCGTGTTGGTGCTTG
CTGTGCACCTTTTCGCTGGATCTCTTTCGCAACCAAGACACCCACAGCCT
GCCTCCACTCTCAGCGCTGTTGCACACGCACGCGCACACGCCACCATCAC
CATCCGCGGAACGAAAACACCGGCCACCAGAAGACAAAGGAAGGTTTATG
ACCACACAGAGAGGAGGCCGCTTGTGCCGGCATTCTCCATGTCTCGTCAA
CCTTGTTGCCCCTCATCTACTTGCTTCATTTCAACCACTTTTTTATTTGA
TTTCTGAGTGCGGTGCCGTCGGATCCATTCCGCGGCCAGTCTACAGTCGA
CACTTCTCCATTCGTGCGCGGGTGTTTTCTGTGTGGCACCGTGTTGCGCT
CAAGTGTTATGGACACGACCGGCTGGCCGAACAAGGACGCAGTTCGCAGG
TGTATCACTCACACAAGGTATCCACGGGGCCGCCGCAGAGAGGGGCGGGT
GAGGGCGGCTAAGAATGACCGGGAGGGATCCACCTCACCGTTGCACACGC
TCCCTGTGCAACCCGCGACATCCATATCGATTGTTTCCGAACGCTGTGAA
TACAAGCCCCCTCTGAGTGCTTCCTGCTGATTCATTGGGATGTTGTTTCC
AGAACGACCACTCTGCTGAGGGCGGAGATTGCTCGGATCTGTAGTCATTC
TCGCCCTGTCGCACGTTTGAATCTCTGCTTTCTCGCCCCTCCCCTCCTCC
TCCTCTACAAGGGTGGAGTTCTGGGTAGGTATGTCGCACTATGAAGTCCT
CCGCACTAGAGGGATTGTGAGTACGCTGTCGCGATATCTGTACACCTACC
TTCCGGCTGAGCAATGAACAGATATTCGTGCGCGGAAGCAATGGCGTCAT
CCCTCTCCAAAGAACCCGCTAGAATGCGCTGGAAACAGATGTTCCAGCCT
CAGGCATGACAGCTGGCTTTCCTCTTGGGAAAGATTTTGCACTCCTTGCA
CTCCTGAGAAGTGCTCCTGTATAGCTTCGGTCCAATGGTGTTTTCGCCAA
CTTGCTCGCAGACTCTCGTCCGGCCCGTTTTCGTGTTGATGGTCACGGCG
TCGCCATTTCACAGCCCTGTTTTCATTGTGTCACGATAGTTGTAGACTAC
ACTTTTCCTGCCGCTGACCTTTGCAAGTGCCATTTCCCTACCACGAGTCC
GGCGAGGGTGCGGAAAATATGTGCCAGGTTTACACCCTTTGACGCTATCA
TGCACCCCCTTAACCTCCTACTTGTTCTGTCTCGAGCCCGGCGAATTCGC
GGGAAATCTCTCAAGTGGACGCCCTCCACACTTTGCTGCACCCCTCCCGC
CTCCTCAACCTCTGTTGTATTTGTCGCATTGGCATCTTGCTCTTCGCCCT
CCCCTCGCTCCCGTCTATCCCTCTCTCGCAAGTTGGCCCCCTGCCCCGCT
TTCTCTCCTGCGCTGACTGATGTGGACACTGCCGTATGCATGATGCGACC
ACGCCTCACCTTCTTCCTTCTGCAGATGAGAAGGGAGGCGAGCGACCCTT
ATCATGTCTGCGCCCCGGACCTCTACCCTCGCTGCACCCGGCAAGGTGAG
TACTGCCGGGGGACACGTATCTGACCCCCGCCCCCCTCAGAAGCTGCTCT
CGACCTGTAGAGAGCACGGATGAAGGTGGTGGGTATGTCATCCCAAATTG
TTGCTAGGAGTCGTGCTTTCTGCCTCACATGGGTGCACATTGAGAGAGTG
AGCAACCCCAGCGCCCTCTCTGGTAGCTAGAATCGAGGGCATCATGTGGT
GGCGTAGAGGATTATCGTGTTTTCTCGCAGCGAACCGGGCCTCCCCATTC
GCTCAAAGAAATACACTCTCGCGGTGTTGCACAAGAACCGAAGGGTCTCA
GCGGCCAGAACTGAGTTGGACTCGCAGCCGTGCAGGGTTTGGTTGTGTGC
TACAGATGCGAGGGCGGAGTAGTAGGGGCCAAAGAAGCCGAGTGCTGCGG
CAGCCCAGCTTCGGCGTGTGCGGGAGGGCGCGTTCGTGTCTGAGCGAAGT
CTTCGTCGAGATGTGCACGCATCACTCCTCCGGTTTTCGCAACGAGGAGA
TGATTGCGTCAACATTTACCACCATTGCATGGCGAATAGGTGTCTGGCAG
AAGGTCGTGGACCCCGAGTCGTGATGGTCGCATGACGGCATGTTTTTTTG
GGCCTCCTGGCTTCGTGTAATCACCGAAGAATAGAGCCCCTCTAGTCATT
TTTTTCCTTGTTACGGTGGGCTCCAGGACTCTTGCCATCGTCTACTCCTC
GCAAGGAAAGTTCCGCCCTCGTTGTCGGGTTTATCATTGGTCGGCGGGCT
ACTGTCGCGACTTTCTGTCATCCTCGCCTCCTTATCGAGTGGAAGAATTG
AGCCCCAGGTTGTCAGGTTTATCAAGATTTGGTGGACTTCAGGCCTGGAT
TTCAAAACCATCATCTCCTTGTCAACTGGTGCCAAAGCCCCATGGCGTCA
AATCCTGTATTCGGCAGGCACAAATGTAACATTTTAAGCACCTTCCTGCT
CCCCGCAAGCAACAGTCTTTTTGGGAGTGTGGTCCTCCAAATGATGGGTT
GTGGTGATCTCTCTGAGCGGTAGAAACAGTACTCCATCTCAAAAGGGATT
AGATTTTAATGATCATCCAATCCGAAGAACCAACGAGCAAGCGCCTTTCC
CCGCCGTGATTCGATCTCCGGAACCCCGTCATTTTCCGCCGTGTCTTCCT
TCAGATCACCTGAGGAAGAAGAATTGCAGCAAAAATCCGCGCTGCCTATA
TGGTCTTGGAGAAGGCAAAGAGGTGGGAGGACAGGTTTCGCTGGTTCTTC
CATCCTATTGATTTGGCGAGGGTAGAGTGCAGCAACAACGTCCAGTGATC
GACCTCGCACCTTATTGCACATGTAAGAATAGGTTCTCGAAAGGGCCGCA
TAGGCTTCTTCATTTTTACACAATGCAGGTCAAGATCCTTCCGCCGATTT
CAAGATGCACTCAAGCGCAGTGAAATACCGTAAATGTAAGTAGAAATGCT
TGTACGAACCCCTTTCAGATCGAAGCTTGATACCAGGCCAATGCAAGACA
AAAGTTTTGCCAGCTTTTAAAACATCGTTCTCTCGGAAGCATTGACATCT
TAAAAGGAAACATTCCCTGCGGGAAACTACGGCAGAACCTGAAGTCCGCT
CCTCTACATACATCAGTTTCATGCCCGCCGGGTCGACAGCGACGAAACCC
TCCCATCTGTTGCTTCGCCTTGCCTCTCCGCCGTTGCAACTGAGTGACGT
CAGCTGTTCGATGAACATAAAACAGTACGCACGCATCTGTACCATCAGCG
TGTTCCGTCTTGGCTTGCAGGCGGACAATTTTGCATTTTTTTCTTTTGAA
CTTTCAGCAGTTCTTCATGCGCCAAACGATGTAGATTTGAAACAAAAATG
GAGGCAGAAGGCAATCCGAAACAGCTCGTTGCCCTCTAGGTACTTGCAGA
ACGGGTATTACTCCATCCGCCATTCAAACTTTTGAGGTACCCTTCCTTAA
GTTGGACAAAAACAATGATATTTTAGCATCGTTTACTTTTGCTTGGCAGG
CTCAAGGAGGAGAACATGTTATTTTCTGTCCAAGGTTCCGACCTCCTGTC
TTTTTGCATCTCATAGTCCTGTTTGGGCTGTTCTGACACCGCGTGGTCAG
CACAACAATTGACCGCTTCCAGCGGCATCGAACAGCACAAAAGAGGAGGG
GGGTGAAACGGGGGGGGCAAGACAAAGGGAGAACATTACAACAGAAAATA
TGCGCGAAGTTCGAGTTCGAATCCAGGGGCCAGAAGAAAATATTGCTCTT
CGTCGCCTACACTACCAGGGGTCTTTACCCTTCAGAGGTTCGATGACGCC
GAAGGCTCCAGTTCGCCAAGGGCAGCAGCAAATAGATAGGGAAATAGAAG
GATACAATCCCGTTCCTATAATCCCTCTCCACAACAAACTACCACTATTC
AACAAAGGGATCTCCATGTACCTGTTTATTTTTTGATTCAGAGATTTGGG
AAATATTTCTTGCAAGCTTACGCGGTTTTTCAGGCGCGGAAACATTCTTG
TCGCGCAAGTCCGTCGACACGGTCGTTGACCACAAGCGCCGGCTCCTGTG
AAGCCGGCACCGCTTACAGAGCCCACCAAACTATCTGCACAAACACCATT
ACGTATCCCCTTCTTGTTTGCACACACGCCCGCCCCCGCCCCCCCCCAGG
GAATCTGGAGCGCACGGCCGGCTCTCATCACTCAGCTAGGGGAGGACATG
TCCGGAGTGCTCAAGGATGGGCTTAGCCCACATTTCGAGGCAGGCGAGGC
CACGACGGGCGGGGCCAAGTCGGCGACATCCGCTACCGGCGACGCTGCGG
CGACTTCCACACGCCACCCCCGGCGCCTCCTCCCGACGGGGCTGAGAAAC
CTGGGTGCGACCTGCTACCTTAACTCTCAGCTCCAGGCACTCTTCGCGAA
CAAGGTCTTCAGGGACGGGGTCTTCTCTTGGAGGCCTTCGACGGGGTCGA
CCGCGGCGGCGGCGGCGGAGGCGGCGGCGGCCACTGCAGCAGGTGCGCGC
AGGTTGTTCAATCGGGGCGGCGGTGAAGCGCGCGGGTGGGTTGTAGGTGC
ATGAATTGCCGCAGAGGAGGGTCTGGGGGCGTCCTTGGACGTTTTTTGCA
GGGCGATTCAGCTTGGTCACGTGCCATTGTTTGGGGAGCGTGGAAGGCAG
ACGACCAACGCACGCGCTCGAGGTCCAAGTCGAGTCAAGCGAGACTTTGC
CCAAGATCGTATTAGCTTGTGTTTTAGTGTCAGGTTGTACCACAGTGCGC
GAGATCCTGCGTCACTTTGCGACTCATGCTTTGACAATTTAGCGCACATT
TCCCACCTCGACCATGTGTGCTATTCTTTTTGATTTTTGCACCGGGAGCC
TATTCGCTGCCTCCATCATTGCTACAACCCGTACTCGCGTCGTCCTTCTT
TCTCCGTCGTCAGGTGGCGGCATGGGCGGGGCTGGCTCAGCGGGAGTTGG
TAGTGGCGCGGCGGCGAACGGTGGAGACGGGGGGGCGGCCTGCGAGGCAA
TCGAGGCGGCGATGAACGAGCAGGTGGACGACGCTATCATGCGGGTGAGC
AGGAGAGGGGGGGAGCGGGGGTGCGGAGGAGGGCACAGGTGGCTTCTGAA
GCTAGCCTATTGATCCTTGGTCATTCATATCGGCGACGTTTGATGGTATG
ATCGTTCTCGCTGATGCCGCTGACCTTTCTGACCTCGCTGTTGTTGTCAT
CCTTGTTGTTGTTGTTGTTGTTGCTGTTGTAAACTTCTTGTTTCCCATGC
TGTGCGAGTCTGTCTCAGCAGCACCAACCAGGTTGTTGTCACCGAAGACC
TGAGCACTTTGCCTTCGTTATTGTCCCCGATGTTTCTTCAAAGTCTTCGG
CCCGTGTCGCCTTCGTGGCCGTCGCGGATGTGTACTTCATGGGCTTCAAC
CCGTGTGCATTTGTGGCCGTTTCCGACGTGCTTTCGTTTCCTACAGACGT
TCCTTCGTTGCCGTCCATGGTTGGTCCGAGTTGCTGTCTGCAATCTGTGT
GCGTTATTTGCCGCCCCCGATGTGCGTTCATTATCTTCACCCGTATGCCT
TTGTTGCCGTTCCCTGATGCACTTTCGTGACTCACCGAAGCGCTATCGCT
GTCTTCAAGCTATGAGCCTCCTTCACCTTGACTGATGTGCCTTCGTAGCC
TTAACCTGGTCTGCCTTTGTGACCTTTAGGCCGTTCTCACCGCCCCCCCA
AAAAAACATATATAAAAAAAAACGAGCTCAGGAGCTCCAGCTAGTGTTCG
CGCACATGCAGGAGGGAGCAGCTAAGGTTTACGACCCCTCCGGCTTCCCC
GCGCTGCTGCGCATGGACACCGGATCGCAGCAGGACCCGCAGGTGTGAGG
AGGTTTCTCCCCCGGCCCCCTCGTTGCCACCTCTTTTGATGCCCCCACCC
CCAAATGCTTATGTCTTGCGGCGCCGTGGGATTGACTGCCGTCGACGCCG
GCGGGAGTTGTAATTTTGTTTTCTCCGTCTTGAGGCGAAGCTCGCATTTC
CCTTGCTGGTCTCTGTCGTCCTTGTGTACGTTGGTCTCGTCCAGGCCTGG
CGGGTGAACTTCGTTTTTCGTTTTTGTCTGTTCTTTGCTTCTGCCTTCCT
TCGTTCCTGTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC
CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCGCCCGCCCTCCT
TTCCCTCCTTACCTCACCATACCTGTATTTTACTTCGTCTCTTCCATTTA
CTCGTTTTGTCGTGACACCGCGTGGCGTTCACGTCTCACTTTGCCCTCGC
GCAGGAATTCAGCAACTTCTTCCGGATCCTTTTGGAGCGGTGCTTCCAGC
GGAGCCCCCCCCCCTCCGGACTCTGGTGCAGGACACGTTCTGCGGTGAGG
TTGCGTACGTCACCCGCTGCCTCACGTGCAAGGGTGGGCCTCGGCATCAG
CGAACCTTCAACGACCTCGTCCTCCAGATCAACGTGAGGGGCGGAGGAGT
AGAGGAAGAGGGAGAAAGGACGGGGACGGGGGTATACTCAAGTCACGCAT
ACCGTAGCCGATAAGAAAGAGGGGGCTGGGGTGCGTCGGATTGGAGGGGG
GGAGGGAGAGAAGACGGAGGGATGGGGGGGGAGGGCGGGAGGACAAGAGA
ATGAAGGAACGGAAGGAGCAGGGGACAGCGTGAAGGAGGGACGTCGTTGT
TGCCCCGGTTGGTTTCTCGAGCAAGACCAACCTTGTTGTGCTTGTGATCC
TTAATACCGTTGTTGTATTGCCGACGCAGGGGTAGAAGTTCGTGCTTGAT
ACTGTGCCGTGGCTGGTGCTTTCATCCCGACGCTATCGGGCTTTGCCTAA
ATGTCGACTGCGATTTCCATCAAATGAATCAAGGTTGGCTGTCGTTGTTG
TGCTTCCTCAATCTCTGTATTTTATTCATTCTGTGCACCAAACTATACAC
TTTCTCCAGAAACACCGGACGGTTGAAGCGATCCTCGACGGCCACCTGGA
ACACGAAATCCTGGACGGCTCCAATCAGGTGATCGGGTGCTTCGTAAAGG
TCGCATTATGTGCAGTATTTTTTCGACTAATGCGGAAAGATGTTCTGCGC
GATTTGATGGGTTTTGACGTGCTGATGAACTCTTATTCCTATTATGGGCA
CCTCAGGCCACGACTGCTGTACACACGGTTTCTTTCGGCCAAACCATGTC
CTAAGAGGGGGCTCCTTGATTCGTCTTTGCAGAAGGTTAGCGGACGATCA
CTCCTCCCGGGAATGCCCTGGATCTTCGACGTAAGACGAGCAATTGTCGC
GAAGTTGCGTAAAACGCTCTTGTCGAGAACGCCCGTTTCCTGTGTCCCTA
TTCATGTTGTCGCTTGCTTCCGCGGTTCTTCGGAAGAAGCGGTCTTAAAT
GTCGCTCTCGCCGAAGCCGCACGTGTGCTGTCTCCGGCGGCGATCCTGTA
TCGCGGCATGTTCCCGTCCTCGTGACGGTGATGAGTCGGTTCGCGTGTCG
AAGACTCTGAGACTCCCGATTACTGTCCTCCCTCTGCCTTCATTCGCCGA
CCCCAGCTGCGAGTCGACCGACTGCGTTCACGTTGTGCGTGTCCGGTTTT
CTTGCGTGAGCCCTGGCGAGAAGGACGAGCTCATGGCCATGGCCGTCACC
AGGCTGGTTCGGCGGCTTTCTCCCCCGAACCGGCACCTAACCTTCCCTTC
CTCCGCCCTACCGCTAGGCTTGTACTCCGTCGGCGATTAACTGATGAACG
GAGGGGGTGAGATATTGTGCTAAAATTTTCTTGGAATCAAACTCATTGTA
TCTTAATCGAAACAAGAAGCGCCCGCGAAGTACTATTAGCCTAAATTACC
TACCGTATGTGTTGTTCCGCCGCCTCCCTCGGCTTCGCGCGTGCCTTTCC
GTGCGTTCCGTGCTGCCTGCACAGTACAACTGCGAGAACTGCGGCAAGAA
ACAGGACGCCGTGACCATGACCGAGCTCGTCAGACTGCCCCCCGTGCTGT
CGTTACAGCTCGTGCGCTACGACTACGACTCTAAGACGATGGAGAAGAAA
AAAATCAAGGCGGCCGTCTCCCTGCCGCCGACCCTCGACATGGGCCCCCG
CCTAGGGTGAACCTTGTATTGCTTTGAACGGTTCGACGACGCACGATTTT
GGATTGTTTTGTTTTGCGGTGGCTGGCCAGCGCTATAGGCTCGTCTATTC
GATCGTGGAGCGTGCGCTGTGTATTTTTTGGGCCGCAAAGAGCACGAAAA
CCAAGTGCCAACAGCATCGCTGGGCGACCTCGACCGCAAAGAGTAACGGC
TCGAAGAGAGCTAGGGGGGTTGGCTGTTGGATCCTGGAATAAAATCTGCC
AACATTTTTTCGCCTGCTGGCAGGCCTCAAGGCGACAAGGAGGCGGCAGG
GGCAGGGGCAGGGGCAGGGGCAGGGGCGGTTGCGGCAGACGTGTCGCCGA
AGGGGTCGGGGGGCGCACACGGCGGCTCTTCCAAGCGGGGAGACGAGTTC
GTGTACGACCTGCGCTGCGTGCTCTATCACAAGGGCAGCAACGTCCACTC
CGGGCACATCGTTGCGGAGGTGAGGAAGGACAATCTGATTTGGTGAAAGC
TCAGCTCAGAGGGTTTTGTCGGCGGCGGTGGTGCTGACTGACGTTGTTGT
CGGTATTGTTTTTTTATTCACTGGTTTCTACGCTTCAGCCTTTCTCTCCT
TGGCATTTACGGCCGAAAAGATTGCAGATAAGAGCGTATGAAGGAAGGGG
GCGACGCCAACCGACACCGTGCACGCTCGTTCAAAGGTTTCCCCTGCCTT
CTTGTTTTCGAGGTGGGCATTCACTGTCTCTTTGATTCCCAGGCGTGCGG
ACTTTTTTCTTTCGTCTCCACCGCGTGTTTCGGCGGACGCAATAAACCTG
CTTCGGACCCTCGTGCTCGGCGTCCCTGAGACGGAGGTCAACCTAGCAAT
AGCCATTTGCACCCCGGGTCCCCCTACGTGCGCGGCGGGATCTCCTTCCC
AGGAAACGGGGGGGAAAACAATGAAGGAGTGTGAACCGCACAACAAAAAT
GCCTGTCACGAAACGCCAAATACCGTGGGGATCGCGCACGGTAGCCCAGG
AATCACGTTTGAATTTTTCAACAAGGGAGCTCCCTCGTCCCACAAGCCCT
TGATGCGTGTACATGTGGGTGAGACATCGAACGCATAGTGATCATGGCCA
TCATTCAGCACTTTCCTCGTGTTGTTCATGGAGTTTTTTCGGCCGCGACA
AAGAAGCGCAAAACAACGCCCGTGAAGAACGAAAGAAAAGTGTTGAACGA
TGGCCATGATCGTCACGGAGTCGATGTCGAGCACCCACATAAACATACAC
ATTCGATGCCAGCGGCGTGAGATGGTCGCAGTATCGACCGTGATTCCTGG
GCTGCTAAGTGCGATCTGCTGGATGTCCGCTTTTGGGTGGGTACCCGGGT
GCTCGACAACCAGATGGTGACGACGACCTTCACCTTCAGCACTATCTTGA
TGTTCTTAGCGTTTTTTTCGTAGCGGTAAAAAAAAAGTCCACTAAAGGAG
ACCGGGTTAGTGCTGAAGATGCGGGTCATCGTTAATGTTTCGATGTTGAG
CACTTATGAACACGCCCGCATGCGGCGCGCTGAATGAGGGGGCTTGTCGA
TGCCAGCGGCGTCACCCGGTCATGGAATTCGGCGCCGTTCCCGGGCCGTG
GAGAGCGATCTCACAGATAGCTTTTTCCTCCGTTCGAAAATGCTCTCACG
TTCGAGATTTTGAACGTTCGCTTCAAAGGGAGCGCGGTAGAGCGAACGGC
CGATCACCGAAAACATCCTGGCTGAGGAGGAAAGAGCAATCCCATTTCGT
TTTGTGACGTACGGTGCCCCTGCCGGCAAAGCAAGAAGTTGGATCGTCAA
CACTCCCATGATGCGACCCCTCTTGCTTGTTTTTCTACTTGACGCGAAGC
CGCGCGGCGATCCTAGTCGCGATTCTTTCTTGCGACCATTTCGAGCGGGA
CACCTGGCCCTCTTTTTTGAAGCATTCCGAACTAGACAGCAGCACCAGGG
ATGATGAAAACGAAACGGCGAATCGCCACCGAAACGAACCAACCCCCCCC
TGAAAACCCACTCTTTCCTTCTTTTTTTTTCTGGAAAAACTCCGCGAAGG
TGCACGATCCCGACCGCGACACGTGGACGCTCTTCGACGACGAGACGGTC
AGAGATATCCCGGGTGTCAACTGCCACGGTCCAAATGGAAGCGGCGATGT
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig8:3397286..3407885-

>mRNA_P-fluviatile_contig8.14635.1 ID=mRNA_P-fluviatile_contig8.14635.1|Name=mRNA_P-fluviatile_contig8.14635.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2400bp|location=Sequence derived from alignment at P-fluviatile_contig8:3397286..3407885- (Porterinema fluviatile SAG_2381)
ATGCATGGCAGGAGAGGAACGCGTCGTTCCTCCAGGGTTGAATCTCCAGG
GGATGATGGGCAGGGCTTGGTCGAGGTTGTATCGATCCAGAGAAAACGTC
CCAGGCAGCAGCAGACAAAGAGCACGGTTGCTGATCGACATGCCGCCCTC
GAAGAACATATGCATGGCAGGAGAGGAACGCGTCGTTCCTCCAGGGTTGA
ATCTCCAGGGGATGATGGGCAGGGCTTGGTCGAGGTTGTATCGATCCAGA
GAAAACGTCCCAGGCAGCAGCAGACAAAGAGCACGGTTGCTGATCGACAT
GCCGCCCTCGAAGAACATATGAGAAGGGAGGCGAGCGACCCTTATCATGT
CTGCGCCCCGGACCTCTACCCTCGCTGCACCCGGCAAGATGAGAAGGGAG
GCGAGCGACCCTTATCATGTCTGCGCCCCGGACCTCTACCCTCGCTGCAC
CCGGCAAGATCACCTGAGGAAGAAGAATTGCAGCAAAAATCCGCGCTGCC
TATATGGTCTTGGAGAAGGCAAAGAGATCACCTGAGGAAGAAGAATTGCA
GCAAAAATCCGCGCTGCCTATATGGTCTTGGAGAAGGCAAAGAGGGAATC
TGGAGCGCACGGCCGGCTCTCATCACTCAGCTAGGGGAGGACATGTCCGG
AGTGCTCAAGGATGGGCTTAGCCCACATTTCGAGGCAGGCGAGGCCACGA
CGGGCGGGGCCAAGTCGGCGACATCCGCTACCGGCGACGCTGCGGCGACT
TCCACACGCCACCCCCGGCGCCTCCTCCCGACGGGGCTGAGAAACCTGGG
TGCGACCTGCTACCTTAACTCTCAGCTCCAGGCACTCTTCGCGAACAAGG
TCTTCAGGGACGGGGTCTTCTCTTGGAGGCCTTCGACGGGGTCGACCGCG
GCGGCGGCGGCGGAGGCGGCGGCGGCCACTGCAGCAGGTGCGCGCAGGTT
GTTCAATCGGGGCGGCGGGAATCTGGAGCGCACGGCCGGCTCTCATCACT
CAGCTAGGGGAGGACATGTCCGGAGTGCTCAAGGATGGGCTTAGCCCACA
TTTCGAGGCAGGCGAGGCCACGACGGGCGGGGCCAAGTCGGCGACATCCG
CTACCGGCGACGCTGCGGCGACTTCCACACGCCACCCCCGGCGCCTCCTC
CCGACGGGGCTGAGAAACCTGGGTGCGACCTGCTACCTTAACTCTCAGCT
CCAGGCACTCTTCGCGAACAAGGTCTTCAGGGACGGGGTCTTCTCTTGGA
GGCCTTCGACGGGGTCGACCGCGGCGGCGGCGGCGGAGGCGGCGGCGGCC
ACTGCAGCAGGTGCGCGCAGGTTGTTCAATCGGGGCGGCGGTGGCGGCAT
GGGCGGGGCTGGCTCAGCGGGAGTTGGTAGTGGCGCGGCGGCGAACGGTG
GAGACGGGGGGGCGGCCTGCGAGGCAATCGAGGCGGCGATGAACGAGCAG
GTGGACGACGCTATCATGCGGGTGGCGGCATGGGCGGGGCTGGCTCAGCG
GGAGTTGGTAGTGGCGCGGCGGCGAACGGTGGAGACGGGGGGGCGGCCTG
CGAGGCAATCGAGGCGGCGATGAACGAGCAGGTGGACGACGCTATCATGC
GGGAGCTCCAGCTAGTGTTCGCGCACATGCAGGAGGGAGCAGCTAAGGTT
TACGACCCCTCCGGCTTCCCCGCGCTGCTGCGCATGGACACCGGATCGCA
GCAGGACCCGCAGGAGCTCCAGCTAGTGTTCGCGCACATGCAGGAGGGAG
CAGCTAAGGTTTACGACCCCTCCGGCTTCCCCGCGCTGCTGCGCATGGAC
ACCGGATCGCAGCAGGACCCGCAGGAATTCAGCAACTTCTTCCGGATCCT
TTTGGAGCGGTGCTTCCAGCGGAGCCCCCCCCCCTCCGGACTCTGGTGCA
GGACACGTTCTGCGGTGAGGTTGCGTACGTCACCCGCTGCCTCACGTGCA
AGGGTGGGCCTCGGCATCAGCGAACCTTCAACGACCTCGTCCTCCAGATC
AACGAATTCAGCAACTTCTTCCGGATCCTTTTGGAGCGGTGCTTCCAGCG
GAGCCCCCCCCCCTCCGGACTCTGGTGCAGGACACGTTCTGCGGTGAGGT
TGCGTACGTCACCCGCTGCCTCACGTGCAAGGGTGGGCCTCGGCATCAGC
GAACCTTCAACGACCTCGTCCTCCAGATCAACAAACACCGGACGGTTGAA
GCGATCCTCGACGGCCACCTGGAACACGAAATCCTGGACGGCTCCAATCA
GAAACACCGGACGGTTGAAGCGATCCTCGACGGCCACCTGGAACACGAAA
TCCTGGACGGCTCCAATCAGTACAACTGCGAGAACTGCGGCAAGAAACAG
GACGCCGTGATACAACTGCGAGAACTGCGGCAAGAAACAGGACGCCGTGA
back to top