mRNA_P-fluviatile_contig8.14623.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14623.1
Unique NamemRNA_P-fluviatile_contig8.14623.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig8.14623.1 vs. uniprot
Match: D8LKW5_ECTSI (Chorismate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKW5_ECTSI)

HSP 1 Score: 343 bits (880), Expect = 1.010e-107
Identity = 172/182 (94.51%), Postives = 180/182 (98.90%), Query Frame = 3 
Query:  738 GDSIGGVVECVARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEIGSGFSGTLLSGKTHNDEFYVDDDGRTRTRTNRSGGVQGGISNGETIVVRVAFKPTSTIGQLQNTVTRDGEETTIRGKGRHDPCVLPRAAPMVEAMVALVLADALMQQKAQCELFPAEALETLETNPLGKKLTGAGV 1283
            GDSIGGVVECVARNVP+GLGSPVFDKLEAELAKACMSLPASKGFEIGSGF+GTLLSGKTHNDEFYVD++G+TRTRTNRSGGVQGGISNGETIVVRVAFKPTSTIGQLQNTVTR GEETT+RGKGRHDPCVLPRAAPMVEAMVALVLAD LMQQKAQCELFPA+ALETLETNPLGKKL+GAGV
Sbjct:  248 GDSIGGVVECVARNVPSGLGSPVFDKLEAELAKACMSLPASKGFEIGSGFAGTLLSGKTHNDEFYVDEEGQTRTRTNRSGGVQGGISNGETIVVRVAFKPTSTIGQLQNTVTRGGEETTMRGKGRHDPCVLPRAAPMVEAMVALVLADVLMQQKAQCELFPADALETLETNPLGKKLSGAGV 429
[Close]
BLAST of mRNA_P-fluviatile_contig8.14623.1 vs. uniprot
Match: A0A835Z9B0_9STRA (Chorismate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9B0_9STRA)

HSP 1 Score: 306 bits (784), Expect = 4.050e-94
Identity = 148/181 (81.77%), Postives = 168/181 (92.82%), Query Frame = 3 
Query:  738 GDSIGGVVECVARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEIGSGFSGTLLSGKTHNDEFYVDDDGRTRTRTNRSGGVQGGISNGETIVVRVAFKPTSTIGQLQNTVTRDGEETTIRGKGRHDPCVLPRAAPMVEAMVALVLADALMQQKAQCELFPAEALETLETNPLGKKLTGAG 1280
            G+SIGGVVECVARNVP+GLGSPVFDKLEA+LAKACMSLPASKGFE+GSGF+GTLL+G+ HNDEFY+D+DGRTRTRTNRSGG+QGGISNGETI++RVAFKPTSTIGQ Q TVTR+G ET +RGKGRHDPCVLPRA PMVEAM+ALVLADALM   AQC+LFPA AL++++ NPLGKKL G G
Sbjct:  207 GNSIGGVVECVARNVPSGLGSPVFDKLEADLAKACMSLPASKGFEVGSGFAGTLLTGRQHNDEFYIDEDGRTRTRTNRSGGIQGGISNGETIIIRVAFKPTSTIGQEQETVTREGVETKMRGKGRHDPCVLPRAVPMVEAMMALVLADALMAHAAQCQLFPAGALDSVDANPLGKKLEGLG 387
[Close]
BLAST of mRNA_P-fluviatile_contig8.14623.1 vs. uniprot
Match: F0YC54_AURAN (Chorismate synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC54_AURAN)

HSP 1 Score: 290 bits (741), Expect = 9.960e-88
Identity = 149/176 (84.66%), Postives = 157/176 (89.20%), Query Frame = 3 
Query:  738 GDSIGGVVECVARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEIGSGFSGTLLSGKTHNDEFYVDDDGRTRTRTNRSGGVQGGISNGETIVVRVAFKPTSTIGQLQNTVTRDGEETTIRGKGRHDPCVLPRAAPMVEAMVALVLADALMQQKAQCELFPAEALETLETNPLGKK 1265
            G+SIGGVV CVA+NVPAGLGSPVFDKLEAELAKACMSLPASKGFE+GSGF GTLL+GK HNDEFYVD DGRTRTR+NRSGG+QGGISNGETIVVRVAFKPTSTIGQLQ TVTRDGEE  +RGKGRHDPCVLPRAAPMVE+MVAL L DALMQQKAQCEL   EA      NPLG K
Sbjct:  208 GNSIGGVVTCVAQNVPAGLGSPVFDKLEAELAKACMSLPASKGFEVGSGFDGTLLAGKDHNDEFYVDADGRTRTRSNRSGGIQGGISNGETIVVRVAFKPTSTIGQLQATVTRDGEEVELRGKGRHDPCVLPRAAPMVESMVALTLMDALMQQKAQCELLDFEADGGF--NPLGSK 381
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BLAST of mRNA_P-fluviatile_contig8.14623.1 vs. uniprot
Match: A0A8J2SL65_9STRA (Chorismate synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SL65_9STRA)

HSP 1 Score: 287 bits (735), Expect = 1.890e-86
Identity = 144/160 (90.00%), Postives = 153/160 (95.62%), Query Frame = 3 
Query:  738 GDSIGGVVECVARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEIGSGFSGTLLSGKTHNDEFYVDDDGRTRTRTNRSGGVQGGISNGETIVVRVAFKPTSTIGQLQNTVTRDGEETTIRGKGRHDPCVLPRAAPMVEAMVALVLADALMQQKAQCELF 1217
            G+SIGGVVECVA NVPAGLG+PVFDKLEAELAKACMSLPASKGFEIGSGF GTLL+GK HNDEFYVD +GRTRTR+NRSGGVQGGISNGETI VRVAFKPTSTIGQLQNTVTRDG+ET +RGKGRHDPCVLPRAAPMVE+MVALVLADALMQQKAQC+L 
Sbjct:  239 GNSIGGVVECVAYNVPAGLGAPVFDKLEAELAKACMSLPASKGFEIGSGFGGTLLAGKDHNDEFYVDANGRTRTRSNRSGGVQGGISNGETIWVRVAFKPTSTIGQLQNTVTRDGQETELRGKGRHDPCVLPRAAPMVESMVALVLADALMQQKAQCDLL 398
[Close]
BLAST of mRNA_P-fluviatile_contig8.14623.1 vs. uniprot
Match: A0A7S2KWI8_9STRA (Chorismate synthase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KWI8_9STRA)

HSP 1 Score: 278 bits (710), Expect = 1.670e-84
Identity = 143/187 (76.47%), Postives = 154/187 (82.35%), Query Frame = 3 
Query:  738 GDSIGGVVECVARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEIGSGFSGTLLSGKTHNDEFYVDD-DGRTRTRTNRSGGVQGGISNGETIVVRVAFKPTSTIGQLQNTVTRDGEETTIRGKGRHDPCVLPRAAPMVEAMVALVLADALMQQKAQCELFPAEALETLETNPLGKKLTGAGVPSPA 1295
            G+SIGGVV CVARNVPAGLGSPVFDKLEA+LAKACMS+PA+KGFE GSGF GTLLSGK HNDEFYVD   G TRT+TNRSGG+QGGISNGE IV+RVAFKPTSTIGQLQ TVTRDG+E  +RGKGRHDPCVLPRA PMVEAMVAL L D LM Q+AQCELFP EA      NP+G      G P  A
Sbjct:  108 GNSIGGVVTCVARNVPAGLGSPVFDKLEADLAKACMSIPAAKGFESGSGFDGTLLSGKEHNDEFYVDPVTGATRTKTNRSGGIQGGISNGENIVIRVAFKPTSTIGQLQKTVTRDGQEVELRGKGRHDPCVLPRAIPMVEAMVALTLVDHLMMQQAQCELFPNEAAVEDLPNPMGTTAHREGGPKKA 294
[Close]
BLAST of mRNA_P-fluviatile_contig8.14623.1 vs. uniprot
Match: A0A7S2XR93_9STRA (Chorismate synthase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XR93_9STRA)

HSP 1 Score: 277 bits (708), Expect = 1.890e-84
Identity = 139/184 (75.54%), Postives = 154/184 (83.70%), Query Frame = 3 
Query:  738 GDSIGGVVECVARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEIGSGFSGTLLSGKTHNDEFYVDDD-GRTRTRTNRSGGVQGGISNGETIVVRVAFKPTSTIGQLQNTVTRDGEETTIRGKGRHDPCVLPRAAPMVEAMVALVLADALMQQKAQCELFPAEALETLETNPLGKKLTGAGVP 1286
            G+SIGGVV CVARNVPAGLGSPVFDKLEA+LAKACMS+PA+KGFE G GF+GTLLSGK HNDEFYVD + G TRT TNRSGG+QGGISNGE +V+ VAFKPTSTIGQ+Q TVTRDG E  +RGKGRHDPCVLPRA PMVEAM+ALVL DALM Q+AQCELFP EA    + NP+G      G P
Sbjct:   74 GNSIGGVVTCVARNVPAGLGSPVFDKLEADLAKACMSIPAAKGFESGDGFAGTLLSGKDHNDEFYVDPETGATRTSTNRSGGIQGGISNGENVVIHVAFKPTSTIGQVQKTVTRDGREVELRGKGRHDPCVLPRAVPMVEAMMALVLVDALMMQQAQCELFPNEASSEEKPNPMGTTARYEGEP 257
[Close]
BLAST of mRNA_P-fluviatile_contig8.14623.1 vs. uniprot
Match: A0A7S0FMT2_9STRA (Chorismate synthase n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FMT2_9STRA)

HSP 1 Score: 274 bits (701), Expect = 2.660e-84
Identity = 139/185 (75.14%), Postives = 154/185 (83.24%), Query Frame = 3 
Query:  738 GDSIGGVVECVARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEIGSGFSGTLLSGKTHNDEFYVDDD-GRTRTRTNRSGGVQGGISNGETIVVRVAFKPTSTIGQLQNTVTRDGEETTIRGKGRHDPCVLPRAAPMVEAMVALVLADALMQQKAQCELFPAEALETLETNPLGKKLTGAGVPS 1289
            G+SIGGVV CVARNVPAGLG+PVFDKLEA+LAKACMS+PA+KGFE G GF+GTLL+GK HNDEFY+D + G TRTRTNRSGG+QGGISNGE IVV VAFKPTSTIGQ QNTVTRDG+E  +RGKGRHDPCVLPRA PMVEAMVAL L D LM Q+AQCELFP EA      NP+G      G P+
Sbjct:   14 GNSIGGVVTCVARNVPAGLGAPVFDKLEADLAKACMSIPAAKGFESGDGFAGTLLTGKDHNDEFYIDPETGATRTRTNRSGGIQGGISNGEDIVVHVAFKPTSTIGQAQNTVTRDGQEVELRGKGRHDPCVLPRAVPMVEAMVALTLVDHLMMQQAQCELFPNEAAVEDLPNPMGTTAHREGGPA 198
[Close]
BLAST of mRNA_P-fluviatile_contig8.14623.1 vs. uniprot
Match: A0A6V1QKG4_HETAK (Chorismate synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QKG4_HETAK)

HSP 1 Score: 281 bits (718), Expect = 5.950e-84
Identity = 146/192 (76.04%), Postives = 159/192 (82.81%), Query Frame = 3 
Query:  726 VFTDGDSIGGVVECVARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEIGSGFSGTLLSGKTHNDEFYVDDDGRTRTRTNRSGGVQGGISNGETIVVRVAFKPTSTIGQLQNTVTRDGEETTIRGKGRHDPCVLPRAAPMVEAMVALVLADALMQQKAQCELFPAEALETLETNPLGKKLTGAGVPSPAHS 1301
            V   G+SIGGVVE  ARNVPAGLG+PVFDKLEAELAKACMSLPA+KGFE+GSGF GTLL+GK HNDEF++D  GRTRTRTNRSGG+QGGISNGETIVV+VAFKPTSTIGQLQNTVTRDG E   RGKGRHDPCVLPRA PMVEAMVAL LADALMQ  AQ      E  + +  NPLGKKL GAG    A++
Sbjct:  233 VRKSGNSIGGVVEVAARNVPAGLGAPVFDKLEAELAKACMSLPAAKGFEVGSGFGGTLLTGKEHNDEFHLDASGRTRTRTNRSGGIQGGISNGETIVVKVAFKPTSTIGQLQNTVTRDGTEVEHRGKGRHDPCVLPRAVPMVEAMVALTLADALMQHSAQVNTLVLEQ-DGVPINPLGKKLEGAGFQVVANN 423
[Close]
BLAST of mRNA_P-fluviatile_contig8.14623.1 vs. uniprot
Match: A0A7S3NPD4_9STRA (Chorismate synthase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPD4_9STRA)

HSP 1 Score: 278 bits (712), Expect = 4.260e-83
Identity = 141/178 (79.21%), Postives = 158/178 (88.76%), Query Frame = 3 
Query:  738 GDSIGGVVECVARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEIGSGFSGTLLSGKTHNDEFYVDDD-GRTRTRTNRSGGVQGGISNGETIVVRVAFKPTSTIGQLQNTVTRDGEETTIRGKGRHDPCVLPRAAPMVEAMVALVLADALMQQKAQCELFPAEALETLETNPLGKKL 1268
            G+SIGGVVEC+ARNVPAGLGSPVFDKLEA+LAKACMSLPA+KGFEIGSGFSG LL+GK HNDEFY+D   GRTRT++NRSGG+QGGISNGETI++RVAFKPTSTIGQLQNTVTRDG+ETT+RGKGRHDPCVLPRA PMV+ MVALVLADAL    AQC+L P E  +    NPLG +L
Sbjct:  237 GNSIGGVVECIARNVPAGLGSPVFDKLEADLAKACMSLPAAKGFEIGSGFSGVLLTGKEHNDEFYIDSHTGRTRTKSNRSGGIQGGISNGETIILRVAFKPTSTIGQLQNTVTRDGKETTLRGKGRHDPCVLPRACPMVDNMVALVLADALACHLAQCQLLPTEHADF---NPLGVQL 411
[Close]
BLAST of mRNA_P-fluviatile_contig8.14623.1 vs. uniprot
Match: A0A7S2B041_9STRA (Chorismate synthase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B041_9STRA)

HSP 1 Score: 277 bits (709), Expect = 1.770e-82
Identity = 133/177 (75.14%), Postives = 153/177 (86.44%), Query Frame = 3 
Query:  738 GDSIGGVVECVARNVPAGLGSPVFDKLEAELAKACMSLPASKGFEIGSGFSGTLLSGKTHNDEFYVDDDGRTRTRTNRSGGVQGGISNGETIVVRVAFKPTSTIGQLQNTVTRDGEETTIRGKGRHDPCVLPRAAPMVEAMVALVLADALMQQKAQCELFPAEALETLETNPLGKKL 1268
            G+S+GGVVEC+ RNVP+GLG+P FDKLEA+LAKACMSLPASKGFE+GSGF GT+L+GK HNDEFY+D++G+TRTR+NRSGG+QGGISNGETI++RVAFKPTSTIGQLQ TVTR GEETT+RGKGRHDPCVLPRA PMVE+MVAL L D LM   AQC+L P         NPLGK L
Sbjct:  254 GNSVGGVVECIVRNVPSGLGAPCFDKLEADLAKACMSLPASKGFEVGSGFGGTMLTGKEHNDEFYIDENGQTRTRSNRSGGIQGGISNGETIILRVAFKPTSTIGQLQETVTRGGEETTMRGKGRHDPCVLPRAVPMVESMVALTLVDHLMMHHAQCQLLPLPMENEEAPNPLGKAL 430
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKW5_ECTSI1.010e-10794.51Chorismate synthase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835Z9B0_9STRA4.050e-9481.77Chorismate synthase n=1 Tax=Tribonema minus TaxID=... [more]
F0YC54_AURAN9.960e-8884.66Chorismate synthase n=1 Tax=Aureococcus anophageff... [more]
A0A8J2SL65_9STRA1.890e-8690.00Chorismate synthase n=1 Tax=Pelagomonas calceolata... [more]
A0A7S2KWI8_9STRA1.670e-8476.47Chorismate synthase (Fragment) n=1 Tax=Leptocylind... [more]
A0A7S2XR93_9STRA1.890e-8475.54Chorismate synthase n=1 Tax=Attheya septentrionali... [more]
A0A7S0FMT2_9STRA2.660e-8475.14Chorismate synthase n=1 Tax=Minutocellus polymorph... [more]
A0A6V1QKG4_HETAK5.950e-8476.04Chorismate synthase n=1 Tax=Heterosigma akashiwo T... [more]
A0A7S3NPD4_9STRA4.260e-8379.21Chorismate synthase n=1 Tax=Aureoumbra lagunensis ... [more]
A0A7S2B041_9STRA1.770e-8275.14Chorismate synthase n=2 Tax=Dictyocha speculum Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3297965..3302815 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score347.1
Seed ortholog evalue5.8e-93
Seed eggNOG ortholog2880.D8LKW5
KEGG rclassRC00586
KEGG koko:K01736
KEGG ReactionR01714
KEGG Pathwayko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230
KEGG ModuleM00022
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009507,GO:0009536,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.chorismate synthase activity
EggNOG OGsCOG0082@1,KOG4492@2759
EC4.2.3.5
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionChorismate Synthase
Ec32 orthologEc-11_005820.1
Exons8
Model size2120
Cds size609
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14623.1prot_P-fluviatile_contig8.14623.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 3299906..3302002 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817257.7069592-UTR-P-fluviatile_contig8:3297964..32982241622817257.7069592-UTR-P-fluviatile_contig8:3297964..3298224Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3297965..3298224 +
1693571765.9422467-UTR-P-fluviatile_contig8:3297964..32982241693571765.9422467-UTR-P-fluviatile_contig8:3297964..3298224Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3297965..3298224 +
1622817257.719069-UTR-P-fluviatile_contig8:3298932..32991251622817257.719069-UTR-P-fluviatile_contig8:3298932..3299125Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3298933..3299125 +
1693571765.9563923-UTR-P-fluviatile_contig8:3298932..32991251693571765.9563923-UTR-P-fluviatile_contig8:3298932..3299125Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3298933..3299125 +
1622817257.7302263-UTR-P-fluviatile_contig8:3299204..32992651622817257.7302263-UTR-P-fluviatile_contig8:3299204..3299265Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3299205..3299265 +
1693571765.9673977-UTR-P-fluviatile_contig8:3299204..32992651693571765.9673977-UTR-P-fluviatile_contig8:3299204..3299265Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3299205..3299265 +
1622817257.7402997-UTR-P-fluviatile_contig8:3299569..32996811622817257.7402997-UTR-P-fluviatile_contig8:3299569..3299681Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3299570..3299681 +
1693571765.9777584-UTR-P-fluviatile_contig8:3299569..32996811693571765.9777584-UTR-P-fluviatile_contig8:3299569..3299681Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3299570..3299681 +
1622817257.750122-UTR-P-fluviatile_contig8:3299833..32999051622817257.750122-UTR-P-fluviatile_contig8:3299833..3299905Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3299834..3299905 +
1693571765.992365-UTR-P-fluviatile_contig8:3299833..32999051693571765.992365-UTR-P-fluviatile_contig8:3299833..3299905Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3299834..3299905 +
1622817257.8112605-UTR-P-fluviatile_contig8:3302002..33028151622817257.8112605-UTR-P-fluviatile_contig8:3302002..3302815Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3302003..3302815 +
1693571766.1844864-UTR-P-fluviatile_contig8:3302002..33028151693571766.1844864-UTR-P-fluviatile_contig8:3302002..3302815Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3302003..3302815 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817257.7607338-CDS-P-fluviatile_contig8:3299905..33000791622817257.7607338-CDS-P-fluviatile_contig8:3299905..3300079Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3299906..3300079 +
1693571766.005654-CDS-P-fluviatile_contig8:3299905..33000791693571766.005654-CDS-P-fluviatile_contig8:3299905..3300079Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3299906..3300079 +
1622817257.773998-CDS-P-fluviatile_contig8:3300642..33007951622817257.773998-CDS-P-fluviatile_contig8:3300642..3300795Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3300643..3300795 +
1693571766.0149522-CDS-P-fluviatile_contig8:3300642..33007951693571766.0149522-CDS-P-fluviatile_contig8:3300642..3300795Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3300643..3300795 +
1622817257.7848759-CDS-P-fluviatile_contig8:3301177..33013061622817257.7848759-CDS-P-fluviatile_contig8:3301177..3301306Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3301178..3301306 +
1693571766.1601813-CDS-P-fluviatile_contig8:3301177..33013061693571766.1601813-CDS-P-fluviatile_contig8:3301177..3301306Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3301178..3301306 +
1622817257.7998111-CDS-P-fluviatile_contig8:3301849..33020021622817257.7998111-CDS-P-fluviatile_contig8:3301849..3302002Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3301850..3302002 +
1693571766.1752403-CDS-P-fluviatile_contig8:3301849..33020021693571766.1752403-CDS-P-fluviatile_contig8:3301849..3302002Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3301850..3302002 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14623.1

>prot_P-fluviatile_contig8.14623.1 ID=prot_P-fluviatile_contig8.14623.1|Name=mRNA_P-fluviatile_contig8.14623.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=203bp
MVMDLFHWYVFTDGDSIGGVVECVARNVPAGLGSPVFDKLEAELAKACMS
LPASKGFEIGSGFSGTLLSGKTHNDEFYVDDDGRTRTRTNRSGGVQGGIS
NGETIVVRVAFKPTSTIGQLQNTVTRDGEETTIRGKGRHDPCVLPRAAPM
VEAMVALVLADALMQQKAQCELFPAEALETLETNPLGKKLTGAGVPSPAH
SA*
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mRNA from alignment at P-fluviatile_contig8:3297965..3302815+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14623.1 ID=mRNA_P-fluviatile_contig8.14623.1|Name=mRNA_P-fluviatile_contig8.14623.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4851bp|location=Sequence derived from alignment at P-fluviatile_contig8:3297965..3302815+ (Porterinema fluviatile SAG_2381)
ATGACACGGCGATGTGACGCCAGGAAGGCTCCTGCCCTGGCATTACTAGC
CACTCTGGCGCTGTGGAGCAGCAAAGCCGATGCTTTCGTGGTTGGCATGA
CAGGCGCTTCCAGCAGCTCGACGATAACCATGGGCATGGGTAACAGCTTC
GGCCGCCTCTTCCGCATCAGCACCTGGGGGGAGAGCCACGGGGGAGGGGT
AGGCGTGAACGTGGACGGCTGCCCCCAAGATACCGCTGACAGCCGAAGAT
GTCCAAGTCGGTGCGTGGATTTGTTCATCTATATGTGGGTCACGTGCCGC
GCGGTGCTGCAACTGCAGTCTGTGCAGTCCCTTTGGTTGCCGCGTTGCAT
TGTGCGCCACATCAGTCTGCGTGGACATTTGATGCGGACTCTGCCAGGCC
ACCACCCTTCCTTCGGCGCGTAAGTAGGGGAGCTGATTCAAATTGAAATA
CCTGGCTGCATCTGTACATTGCGGTGCCCTGATTTGTGGTGAACGCTCTA
CCGCACCCTGTGGTGCGAAGTTGTGGCTCAACACCGTGGATCGTTCATAC
ACCACTACGCACGCCGGCCTCGAAGATCAATGCCTCATCCCAACGAAGAT
TCTTGCTCCGTGAAGCAAACAATGACCGACGCTTTGACACGAATGACCAG
GTATTGCTCGAAGATTAAAGTTAATCCGCTGGCTCAAGCTAGGCAGCTGC
AGCCCATGATTCAACTTCCGCGCACCGGTCGCGAACACACAGAAGCCATC
CACGCACTGCCCGTTACACACCCGGCGGTGGTGAAGCATACGACATGCTC
GACGGCAGGTTATGCGTCATTTTCTCCCGCGACTGACCGCCGTACTCTCT
CTCTTTTCTCCATCTCTCTCTCTCTCTTTCACCCGCTCTCATTTACAACC
TGGCTTTTGCCCTTCTGGGTTGGTGCGCTCTCTCTCTCCGCTTCCGCACA
CTTGCTGCAATGCCGCAGAGCTGGACCGACGGAAACCGGGGCAGTCGCGC
ATCACGACACCCAGAAATGAGGACGACCAAGTGGAGATCCTGTCGGGACT
CTCCCCCGAGGGCTTGACGTTGGGGACGCCAATCGCGATGCTGGTTCGCA
ACAAGGTGAGAGCGCCCGCCCGCCCACCCGCCCTCCCACGCACCCACCCA
CCGATCCTGCAGTTTCGGTTCCGCCCGGCCGCGCCTCTCCTCGTGTGTCG
GTTGTGTAGTTGAAGTTTGTTGTAGTGTGGCATGATGTAGTGATGTGCGG
TACGGTGCGGTTTGGTGTGGGGTACGGTGTGGTGTAGTGCGCTGCGGTGC
GGTGTGGTGTGTTAACGTGGGGTGAGTTGGGGTGGGGTTGGGCTGGTTGG
TGGCTTTGTGTGTGCAGTGTTTGTGTCGTGCCTGCTTGCTGATGGCCAGT
GAACGACCTTGTCGCGAGCTTGTGACGATTGCTGTATTTTTGCGATCCCG
TCACTGCAGGTGTCGGTCTGGTGGTATATGAAGCCGAGATCTTGGAGGGT
GGTTTGTGGACCAATGCGGCCTCTGCGATGAAGGCGTAGATTGATCAGCG
CGCCTTAACAAGCTGGATGGTTTGGTGATGAATCACCTTTTTGTTTTCAT
GGGAGAGAAACTCCGTGCGAAGAATACAGTTGGGGGTGTGGAATACACGC
GTAGCTGCCCGCATTTCGGTCGTGACACATGTGGCGGGAATGACAAACCC
CACATCAAGCGCCCCAAGTTTTGACTTAGCTCGATAACCTCGCAAACTAC
TACTTTTTGATCTTCATCATAACGTAATTCAAAAAAACCACTTAAAGGAA
AATCTTTTCTAAGCGGATAACCTTCAAAACCATAATCTGTTAAAATACGA
CGTAAATCAGGATGATTAGAAAAAAAAATACCAAATAAATCCCAAATCTC
ACGCTCCCACCAATTAGCTGATGGAAAAAGACTAACCACGGATGGTAATG
GATTTATTTCATTGGTATGTGTTTACGGACGGGGACTCGATCGGGGGGGT
CGTCGAGTGCGTGGCGAGGAACGTTCCGGCCGGCCTGGGGTCGCCGGTGT
TCGACAAGCTCGAGGCGGAGCTGGCGAAGGCGTGCATGTCGCTCCCGGCC
AGCAAGGGGTTCGAGGTTCGTTTCGTGTGTGCGGCCAATTTGTGGCCCCC
TTTTGCGTCGTGCGCAGGTATCAAACCGTGTGATCAAGATGGGGGTTCCA
TGCATAGTCATGGTATCGGGGCCACTTGAGAAGAGTGTGGAGGTGGAGAG
AGGGTGGCGGCGCGGCGATGTAACAATGGGCCGGAGAGACCCCTTCGGCC
CAGGCTATTCAGTGCAATTCTCGGTTTAGATACTGCGTTGCCGGAGTAAG
GACACGTGGACGGCGCGACGAATACTTGCCTTGTAGGTGATTGGGAACCC
GCGCGGTCAGAGTGAAACGCCGTTCGTGTCTGCCCATTAGCCTTGGGGAG
GAGAGGTCGGCGAACATGATAGTTCTTCAAAAAGCGGTAGCGCGTGCGTC
ATCACGTACTGTGGGAAGACATGTAGCTGCCCTGCTGTACGCGTTTGGCA
CCACCGTCGAATCATTGTTGTAAAAGCCGAACGACCACCACGCCGTCTAG
CAGTTGGTAGATGAGCGACGACCACACCAACCCCTCTGTTTCCTAACGAA
CGGACTCCGCCCATCGTTCTGCGGCCAGATCGGGTCGGGGTTCTCGGGCA
CTCTACTATCCGGTAAGACTCACAACGACGAGTTCTACGTCGACGACGAC
GGCCGAACGCGCACGCGCACCAACCGCAGCGGGGGCGTGCAAGGGGGCAT
CAGTAACGGGGAGACAATCGTTGTCAGAGTGGTGAGAGCGTTGTCAGAGT
GGTGGGAGAGAGGGAGGAGGGGGAGGGAGCGCGGGAGATAAGATGGCAAA
AGAGAAGAGAGGCGGAGAGAGCAAGGAAGGGAGAGGGAGGACAAAGCGCG
AGAGATCACGCTAGAGAAGGAGCGAGGGCGAGAGAGAGAGGAAGCGAGAA
AGAGCGAAAGGGTGACAGAGCGAGGGAGTCTCAGAAATGAAATGAGAAAG
GGCCAACGACTACGTGTGTCCCGTCGACGAAGGCAAGTCTCCGCAGGAGC
AGCTGCATGTGTAATGTCTGTGTGTGAGTGTGGACTCGAACTGCTGCTCT
TGCTCGCTTCTTTCTCGCCCACTTGCATTCCACTCCACGAACCTTTCGCG
GTGTTGTCGACAGGCTTTCAAGCCGACGTCCACCATCGGGCAGCTCCAAA
ACACGGTCACGAGAGATGGCGAGGAGACGACCATACGGGGGAAGGGTCGC
CATGACCCCTGCGTGCTGCCGCGAGCGGCTCCCATGGTTGAGGTGAGGTA
CCCCACGCGCCTCGCCGTTCCGTGGATAGCGTGCGCGTCCGCTGCTGCTG
GCGTCGTCGTGCGGCACCAGCACTACGGCTCTAGGGCGTGTGGCAGTAGA
GTCTCTGCGGAGAAAGGTGTCAGCGGCGTCCGGCCCGTTGTACATCGTTG
AGGATCCGTCGCTCACTCGTGGATCATTTGTACCCGTTTCCGTAACTACG
GATGAGGCATGCCGTGAAGGCGAGAGATGCTCCGGCCCGCAAGTATCCCT
TCCGCGGGGCATAGCGACATTCCCAACGCATTTCGACCCGCAACTTTTAC
ACTCGTAGTGACTAACCTCGAAATTGCTGTTTTTCCCGCGAGTAGTGCAG
AGCGGTACGCGTTTTGTCGTGGCGGATGACCCGACGCACACCTCCACAAG
CCCACCTTGCCCCACCCCCCCCGTCTTCAGGCGAATCAACAACCCTGATG
CACCACTCCGGAAGAGGCCAGGCCTGACTTGTTGTGACTCGGCTTCCCTT
CTGCGCTCGCCCCTTGCGCGTTTCGTTTTTGCCAGGCTATGGTTGCCTTG
GTGCTCGCAGACGCCTTGATGCAGCAGAAGGCGCAGTGCGAGTTGTTCCC
GGCTGAGGCCCTGGAGACATTAGAGACGAACCCGTTGGGGAAGAAGTTGA
CGGGGGCGGGGGTGCCTTCGCCGGCACACTCGGCGTGAGGGTGCCTCCAG
AGCGTAAATGCGCAGCTCATGAGCTCGTGTTCAGGCGTCGAGTGACGGGA
CCAATTAAATGGTTTTCATGAGCTCGCGGAAGCCCCATGCTGCCCTCGAA
ACCGTGCATGGCAGCTTCGGGGCTCACGGGCATGCCCGGTGCGGTAACCC
TAGCTTGACGGCCTTGGGATCGGCATGTTTGGCGGTACAAATTCAAACCG
TGAGTGAGTGCCGTGCCGGGCATGGTATGCGTGACTGGGCGGCGGTGAGA
GGCGTGTACGGGGCAGGGTGTTCGTGACTTTTTAAGGGCCTGTTTCATGA
AATGGAGCGCGCAACTCGGGGGGGCAGGCAAGCGGGGTATGTTGTGGCCG
GTTGCTTCTTGGGTCCCTGGGAAACTTTGGTTTGGAGAGTGAGATTGGCT
TGTGTGCGACTCTGCCTGTGGGGCGAAGATGATATCCAGAACATGATTTG
TTTGCTTTTCCAGGAGGAAACTCTGCGAATTCAAGAAGTTGATTCAATCA
ATCGGTCTTCTCGTGTGCCCTTGTCTTCAGGGCAAAGCAGCCGACCGCCT
TACCTCGTGTTTGTAGAGCTGTCCCACGCTTTCTGTGTCTATCCACCCCT
CTCGCCCTGTCAAAAATGCCATGGTGGAAGATGGATCAGAGAGATGGGGA
GAAGATCTGTAAACTGCACGGCGGGTGAAGGACCGAGCGGGGGGACGGGT
TTGAGTAAAGTGCTGCTGCAGCCGCAAGCTGCCGACGTACAGCAGTATTC
AGCCTCCGTACCGCCGGAAGAACGGCGTGTGGCGAAAAAAAACACCACGG
C
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:3297965..3302815+

>mRNA_P-fluviatile_contig8.14623.1 ID=mRNA_P-fluviatile_contig8.14623.1|Name=mRNA_P-fluviatile_contig8.14623.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1218bp|location=Sequence derived from alignment at P-fluviatile_contig8:3297965..3302815+ (Porterinema fluviatile SAG_2381)
ATGGTAATGGATTTATTTCATTGGTATGTGTTTACGGACGGGGACTCGAT
CGGGGGGGTCGTCGAGTGCGTGGCGAGGAACGTTCCGGCCGGCCTGGGGT
CGCCGGTGTTCGACAAGCTCGAGGCGGAGCTGGCGAAGGCGTGCATGTCG
CTCCCGGCCAGCAAGGGGTTCGAGATGGTAATGGATTTATTTCATTGGTA
TGTGTTTACGGACGGGGACTCGATCGGGGGGGTCGTCGAGTGCGTGGCGA
GGAACGTTCCGGCCGGCCTGGGGTCGCCGGTGTTCGACAAGCTCGAGGCG
GAGCTGGCGAAGGCGTGCATGTCGCTCCCGGCCAGCAAGGGGTTCGAGAT
CGGGTCGGGGTTCTCGGGCACTCTACTATCCGGTAAGACTCACAACGACG
AGTTCTACGTCGACGACGACGGCCGAACGCGCACGCGCACCAACCGCAGC
GGGGGCGTGCAAGGGGGCATCAGTAACGGGGAGACAATCGTTGTCAGAGT
GATCGGGTCGGGGTTCTCGGGCACTCTACTATCCGGTAAGACTCACAACG
ACGAGTTCTACGTCGACGACGACGGCCGAACGCGCACGCGCACCAACCGC
AGCGGGGGCGTGCAAGGGGGCATCAGTAACGGGGAGACAATCGTTGTCAG
AGTGGCTTTCAAGCCGACGTCCACCATCGGGCAGCTCCAAAACACGGTCA
CGAGAGATGGCGAGGAGACGACCATACGGGGGAAGGGTCGCCATGACCCC
TGCGTGCTGCCGCGAGCGGCTCCCATGGTTGAGGCTTTCAAGCCGACGTC
CACCATCGGGCAGCTCCAAAACACGGTCACGAGAGATGGCGAGGAGACGA
CCATACGGGGGAAGGGTCGCCATGACCCCTGCGTGCTGCCGCGAGCGGCT
CCCATGGTTGAGGCTATGGTTGCCTTGGTGCTCGCAGACGCCTTGATGCA
GCAGAAGGCGCAGTGCGAGTTGTTCCCGGCTGAGGCCCTGGAGACATTAG
AGACGAACCCGTTGGGGAAGAAGTTGACGGGGGCGGGGGTGCCTTCGCCG
GCACACTCGGCGTGAGCTATGGTTGCCTTGGTGCTCGCAGACGCCTTGAT
GCAGCAGAAGGCGCAGTGCGAGTTGTTCCCGGCTGAGGCCCTGGAGACAT
TAGAGACGAACCCGTTGGGGAAGAAGTTGACGGGGGCGGGGGTGCCTTCG
CCGGCACACTCGGCGTGA
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