mRNA_P-fluviatile_contig8.14622.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14622.1
Unique NamemRNA_P-fluviatile_contig8.14622.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig8.14622.1 vs. uniprot
Match: D7G2Q7_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Q7_ECTSI)

HSP 1 Score: 633 bits (1632), Expect = 2.090e-227
Identity = 317/356 (89.04%), Postives = 336/356 (94.38%), Query Frame = 1
Query:   97 MSDSADSAGALGTLFFYVFFVHPVCAWILAPKRFRKDRAIVYAILFLATIAFGKLALENAQRGPNYYQLLGLRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADKFSKMSAALEILMDSEKREIYDKLGPEAAASKHPFNENTMLLEMAVWYITWGVLAYVMTLGKSNGQARDWVFTGQIVMLAAEVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLGTHLYVDVDQQTRDMLLALRAGHQDVLVVLRDIQGSINSLASGGXXXARLANNSAGGSAGTRALPARASAVGKLNRELEEKLTRTRTGVDAVAAEIKDSGKSSGSMQWLLVGVWVVFYFFLNNGGS 1164
            MSD+A+SAGALGTLFFYV FVHPVCAWILAPKRF KDRAIVYAI FLATIA GK+ALENA+RGPN+YQLLG+RRGSSAIEIKRAYRQLSLELHPDKNPSQDAAD FSK+ AA EILMDSEKREIYDKLGPEAA SKHPFNENTML+EMA+WYITWGVLAYVMTLGK+N QARDWVFTGQIVMLA EVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLG+HL+VDVDQQTRDMLLALRAGHQDVLVVLRDIQGSINSL S G   ARL N+S+GGSAG RA+PA+ASAVGKL RELEEKLTR  TGVDAVAAEIKDSGKSSG+MQWLLVG+WVVFYFF+NNGGS
Sbjct:    1 MSDTAESAGALGTLFFYVMFVHPVCAWILAPKRFPKDRAIVYAIAFLATIAIGKMALENAERGPNFYQLLGVRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADMFSKIQAAQEILMDSEKREIYDKLGPEAATSKHPFNENTMLIEMAIWYITWGVLAYVMTLGKANRQARDWVFTGQIVMLAVEVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLGSHLFVDVDQQTRDMLLALRAGHQDVLVVLRDIQGSINSLGSSGGG-ARLTNSSSGGSAGPRAIPAKASAVGKL-RELEEKLTRNGTGVDAVAAEIKDSGKSSGNMQWLLVGIWVVFYFFVNNGGS 354          
BLAST of mRNA_P-fluviatile_contig8.14622.1 vs. uniprot
Match: A0A6H5K8B0_9PHAE (HSP40 like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8B0_9PHAE)

HSP 1 Score: 469 bits (1208), Expect = 1.380e-163
Identity = 232/280 (82.86%), Postives = 245/280 (87.50%), Query Frame = 1
Query:   97 MSDSADSAGALGTLFFYVFFVHPVCAWILAPKRFRKDRAIVYAILFLATIAFGKL-----------------------ALENAQRGPNYYQLLGLRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADKFSKMSAALEILMDSEKREIYDKLGPEAAASKHPFNENTMLLEMAVWYITWGVLAYVMTLGKSNGQARDWVFTGQIVMLAAEVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLGTHLYVDVDQQTRDMLLALRAGHQDVL 867
            MSD+A+SAGALGTLFFYV FVHPVCAWILAPKRF KDRAIVYAI FLATIA GK+                       ALENA+RGPN+YQLLG+RRGSSAIEIKRAYRQLSLELHPDKNPSQDAAD FSK+ AA E+LMDSEKREIYDKLGPEAA SKHPFNENTML+EMA+WYITWGVLAYVMTLGK+N QARDWVFTGQIVMLA EVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLG HL+VDVDQQTRDMLLALRAGHQ V+
Sbjct:    1 MSDTAESAGALGTLFFYVMFVHPVCAWILAPKRFPKDRAIVYAIAFLATIAIGKMVRDGQRSQTNKKTIGWYRPVAKMALENAERGPNFYQLLGVRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADMFSKIQAAQEVLMDSEKREIYDKLGPEAATSKHPFNENTMLIEMAIWYITWGVLAYVMTLGKANRQARDWVFTGQIVMLAVEVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLGNHLFVDVDQQTRDMLLALRAGHQPVV 280          
BLAST of mRNA_P-fluviatile_contig8.14622.1 vs. uniprot
Match: A0A6U1ZV61_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1ZV61_TRICV)

HSP 1 Score: 327 bits (837), Expect = 1.580e-106
Identity = 167/359 (46.52%), Postives = 235/359 (65.46%), Query Frame = 1
Query:  106 SADSAGALGTLFFYVFFVHPVCAWILAPKRFRKDRAIVYAILFLATIAFGKLALENAQRGPNYYQLLGLRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADKFSKMSAALEILMDSEKREIYDKLGPEAAASKHPFNENTMLLEMAVWYITWGVLAYVMTLGKSNGQARDWVFTGQIVMLAAEVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLGTHLYVDVDQQTRDMLLALRAGHQDVLVVLRDIQGSINSLASGGXXXARLANNSAGGSAGTRALPA-------RASAVGKLNRELEEKLTRTRTGVDAVAAEIKDSGKSSGSMQW--LLVGVWVVFYFFLNN 1155
            +AD    L   FFYVF VHP  AWIL P RF K ++I+YAI FLA +A  K  LE   RGPN+YQLLG+ R S+ +EIKRAY++LSL+LHPDKN + DA+++F ++  + ++LMD E RE+Y+K GPE  AS   F+E    +E+ V+YITWG++ +V+TLGK +G AR W FTG IVML  E+AI+T       LP  LFP   E+EVVW++HS+FPA+MNGCRSLG  L++D+D Q R +LLAL+  ++D+L+VLRD+Q  + ++ + G  X      +  G+A T  LPA       RA+  GK+ +EL+E+L  + T V     ++K  G+ S S  +  +++G     Y F NN
Sbjct:    7 AADDLSGLSGFFFYVFIVHPATAWILRPGRFEKKKSIMYAIGFLAALASIKTGLEMQARGPNHYQLLGVTRASNPLEIKRAYKKLSLQLHPDKNTAPDASERFDEVKKSYDVLMDMELREVYNKFGPEGIASNKRFDETQFFIELGVFYITWGMMVFVLTLGKKSGDARQWCFTGMIVMLVCEIAIMTARNNP--LPKELFPTSTEHEVVWLMHSLFPAFMNGCRSLGAFLFIDLDAQARQLLLALQEQNKDILLVLRDVQIGVQTIQAHGGGXXXAGRLAGSGAATTAGLPAQGAAPITRATPTGKI-KELQERLQNSNTSVVKAVDDLKSEGQKSSSFGFYAMIMGYIAFSYLFSNN 362          
BLAST of mRNA_P-fluviatile_contig8.14622.1 vs. uniprot
Match: A0A6U0IH11_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0IH11_9STRA)

HSP 1 Score: 326 bits (835), Expect = 2.870e-106
Identity = 170/366 (46.45%), Postives = 239/366 (65.30%), Query Frame = 1
Query:  100 SDSADSAGALGTLFFYVFFVHPVCAWILAPKRFRKDRAIVYAILFLATIAFGKLALENAQRGPNYYQLLGLRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADKFSKMSAALEILMDSEKREIYDKLGPEAAASKHPFNENTMLLEMAVWYITWGVLAYVMTLGKSNGQARDWVFTGQIVMLAAEVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLGTHLYVDVDQQTRDMLLALRAGHQDVLVVLRDIQGSINSLASGGXXXARLANNSAGG--SAGTRALPA-----------RASAVGKLNRELEEKLTRTRTGVDAVAAEIKDSGKSSGSMQ-WLLVGVWVVFYFFLNN 1155
            ++++D    +G   F+VF VHP  AWIL P RF + ++I+YAI FLA +A  K  +E   +GPNYY  LG+ R S+ +EIKRAY++LSL+LHPDKNPS +A+D+F  +  A +ILMD E R +Y+K G    AS   F+E    +E+AV+Y+TWG++ +V+TLGK +G AR WVFTG IVML  E++I+T+   +  LPSWLFP   EYE VW++HS+FPA+MNGCRSLG  LYVD++ QTR +LLAL+  ++DVL+VLRD+Q  + S+         LAN S GG  S GTR+ P+           RA+  GK+ RE++E+L  +   V    +E+   GKSS S   +  +  +V+F F  N 
Sbjct:    6 AEASDDLSGIGGFLFFVFIVHPATAWILRPGRFERRKSIMYAIAFLAGLAAIKTGIEYNSKGPNYYVRLGVSRDSNPLEIKRAYKKLSLQLHPDKNPSPNASDQFDSVKQAYDILMDLELRGVYNKFGSPGIASNKRFDETQFFVELAVFYLTWGMMVFVLTLGKKSGDARQWVFTGMIVMLVLEISIMTSQ--ENPLPSWLFPQTTEYEAVWLMHSLFPAFMNGCRSLGAFLYVDLEAQTRHLLLALQEQNKDVLLVLRDVQIGVQSI---------LANGSGGGNTSVGTRSSPSMASGNVSAPLLRATPTGKI-REIQERLQSSNAHVVKAVSELNADGKSSSSFGFYAFILAYVLFSFLFNR 359          
BLAST of mRNA_P-fluviatile_contig8.14622.1 vs. uniprot
Match: A0A7S2V6D8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6D8_9STRA)

HSP 1 Score: 320 bits (821), Expect = 2.010e-104
Identity = 159/347 (45.82%), Postives = 237/347 (68.30%), Query Frame = 1
Query:  121 GALGTLFFYVFFVHPVCAWILAPKRFRKDRAIVYAILFLATIAFGKLALENAQRGPNYYQLLGLRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADKFSKMSAALEILMDSEKREIYDKLGPEAAASKHPFNENTMLLEMAVWYITWGVLAYVMTLGKSNGQARDWVFTGQIVMLAAEVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLGTHLYVDVDQQTRDMLLALRAGHQDVLVVLRDIQGSINSLASGGXXXARLANNSAGGSA-GTRALPARASAVGKLNRELEEKLTRTRTGV--DAVAAEIKDSGKSSGSMQWLLVGVWVVFYFFLN 1152
            G LG  FFYV FV+PV  WIL P RF+K + I+YAI FL  IA  K+ ++   RGPNYYQ+LG+ R S+ +EIKRAY+++++ELHPDKNPS +A ++F+++ +A ++LMD E RE+Y+K G +   S   F+E  MLLE+A++Y+TWG+LAYV+TLGKS+  AR W+FTG+IVML AEV  +      G +P+W  P + E+E++ +LH++FP +MNGCR +G+ LYVD+DQQTR++L  L   +  +L+VLRDIQ ++            +A +  GG   G  +   +A+  GKL +ELEE++     G+   AVA E+++SGK+  S  W ++G+++VFY+   
Sbjct:    5 GGLGDFFFYVMFVYPVTNWILKPGRFQKKKGIMYAIAFLVVIASIKIGVDVMDRGPNYYQVLGVNRASNPLEIKRAYKKMAVELHPDKNPSPNAEEEFNRLKSAYDVLMDMELREVYNKFGEDGIKSNKRFDEYQMLLEIAIFYVTWGMLAYVLTLGKSSVTARTWIFTGEIVMLVAEVTFMLN---QGEMPTWFLPFVTEHELILLLHALFPPFMNGCRCIGSALYVDIDQQTRNLLQELHNQNNTILLVLRDIQVNLQQ-------GVAVAGSGGGGKVVGGASSAIKATPTGKL-KELEERMKANALGLKTSAVAKELENSGKTGVSSFWWMLGLYIVFYYIFG 340          
BLAST of mRNA_P-fluviatile_contig8.14622.1 vs. uniprot
Match: A0A1Z5JP57_FISSO (DnaJ homolog subfamily C member 10 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JP57_FISSO)

HSP 1 Score: 320 bits (819), Expect = 5.770e-104
Identity = 171/364 (46.98%), Postives = 243/364 (66.76%), Query Frame = 1
Query:   67 QQPDARPHAKMSDSADSAGALGTLFFYVFFVHPVCAWILAPKRFRKDRAIVYAILFLATIAFGKLALENAQRGPNYYQLLGLRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADKFSKMSAALEILMDSEKREIYDKLGPEAAASKHPFNENTMLLEMAVWYITWGVLAYVMTLGKSNGQARDWVFTGQIVMLAAEVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLGTHLYVDVDQQTRDMLLALRAGHQDVLVVLRDIQGSINSLASGGXXXARLANNSAGGSAGTRALPARASAVGKLNRELEEKLTRTRTGVDAVAAEIK-DSGKSSG-SMQWLLVGVWVVFYFFLN 1152
            QQ DA      S   D +G  G  FFY+F VHP+ AWIL P RF + ++I+YAILFLA +A  K  LE  QRGPNYYQ LG+ R SS +EIKRAY++LSL+LHPDKNPS DA  +F  +  A ++LMD E RE+Y+K G E       ++E   LLE+AV+Y+++GV+A+++T+GK +G+AR+W FTG + ML  EVA++++ G    LP +LFP + E E+VW+LHS+FPA+MNGCRSLG +L+VD+D QTR +LLAL+  ++D+L+VLR++Q  + ++ + G        NS  G+  T  +P RA+  GK+ REL+E+L  + + V      +K D G SS      L++G  V+ Y F N
Sbjct:    4 QQNDA------SGGDDMSGLTG-FFFYMFIVHPITAWILRPGRFERKKSIMYAILFLAGLAAIKTGLEVQQRGPNYYQKLGITRSSSPLEIKRAYKKLSLQLHPDKNPSPDAPAQFDAVKQAYDVLMDMELREVYNKFGHEGIQQNKRYSETQFLLEIAVFYVSYGVMAFLLTMGKKSGEARNWTFTGLLAMLVLEVAVMSSQGNP--LPEYLFPTLTECEIVWLLHSLFPAFMNGCRSLGAYLFVDLDAQTRQLLLALQEQNKDILLVLREVQIGVQTIQTHG-----AGRNSTSGAVVTTDMP-RATPTGKI-RELQERLQASNSSVAQAVQNLKADKGSSSNLGFYGLILGYIVISYVFNN 351          
BLAST of mRNA_P-fluviatile_contig8.14622.1 vs. uniprot
Match: A0A448Z810_9STRA (J domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448Z810_9STRA)

HSP 1 Score: 317 bits (813), Expect = 5.650e-103
Identity = 164/359 (45.68%), Postives = 241/359 (67.13%), Query Frame = 1
Query:   97 MSDSADSAG----ALGTLFFYVFFVHPVCAWILAPKRFRKDRAIVYAILFLATIAFGKLALENAQRGPNYYQLLGLRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADKFSKMSAALEILMDSEKREIYDKLGPEAAASKHPFNENTMLLEMAVWYITWGVLAYVMTLGKSNGQARDWVFTGQIVMLAAEVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLGTHLYVDVDQQTRDMLLALRAGHQDVLVVLRDIQ-GSINSLASGGXXXARLANNSAGG---SAGTRALPARASAVGKLNRELEEKLTRTRTGVDAVAAEIKDSGKSSG-SMQWLLVGVWVVFYFF 1146
            MS+ A + G     LG  FFY+F VHP+ AWIL P RF + ++I+YAI FLA +A  K  LE  Q+GPNYYQ+L + R S+ +EIKR+Y++LSL+LHPDKN S +AAD+F ++  A +++MD E R++Y+K G E  A+   ++E   L+E+A++Y++W V+ +++T+GK +GQARDWVFTG IVML  EV ++T+      LP+WLFP + EY++V  +HS+FPA+MNGCRSLG++L+VDVD Q R  LLAL+  ++D+L+VLRD+Q G  N  A GG    RLA  S G    +A    + ++A+  GK+ +EL+E+L  +   V      +K   KSS      +++G  V+ Y F
Sbjct:    1 MSEDASAGGDDFSGLGGFFFYMFIVHPITAWILKPGRFERKKSIMYAIAFLAALAAIKTGLEMQQQGPNYYQILDVTRESNPLEIKRSYKKLSLKLHPDKNKSPNAADEFDRVKQAYDVIMDLELRDVYNKFGKEGVANNKRYSETQFLIEVAIFYVSWAVMTFLLTMGKKSGQARDWVFTGMIVMLVVEVVVMTSQTNP--LPTWLFPTLTEYDLVKTMHSLFPAFMNGCRSLGSYLFVDVDAQLRQFLLALQEQNKDILLVLRDVQIGVQNIQAHGGGGGHRLAGPSTGNIPVTADGADVASKATPTGKI-KELQERLQYSNANVAQAVQSLKTENKSSNFGFYGMILGYIVISYLF 356          
BLAST of mRNA_P-fluviatile_contig8.14622.1 vs. uniprot
Match: A0A7S0GF48_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GF48_9STRA)

HSP 1 Score: 317 bits (812), Expect = 6.800e-103
Identity = 157/353 (44.48%), Postives = 236/353 (66.86%), Query Frame = 1
Query:  109 ADSAGALGTLFFYVFFVHPVCAWILAPKRFRKDRAIVYAILFLATIAFGKLALENAQRGPNYYQLLGLRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADKFSKMSAALEILMDSEKREIYDKLGPEAAASKHPFNENTMLLEMAVWYITWGVLAYVMTLGKSNGQARDWVFTGQIVMLAAEVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLGTHLYVDVDQQTRDMLLALRAGHQDVLVVLRDIQGSINSLASGGXXXA-RLANN----SAGGSAGTRALPARASAVGKLNRELEEKLTRTRTGVDAVA--AEIKDSGKSSGSMQWLLVGVWVVFYFF 1146
            AD  GA+G+ FFYVF VHP  AWIL P RF + ++I+YAI FLA +A  K  +E  ++GPN+Y LL + R SS ++IKRAY++LSL LHPDKN + DA ++F  +  + ++L+D E RE+Y+K G     S   F+E+T  +E+ V+Y+TWG++ Y++TLGK +G+AR W FTG I+ML  E+AI+T+   +  LP WLFP   EYE++W+LH++FPA+MNGCRS+G++LYVD+D++ R +L AL+  +QD+L+VLRD+Q  I +L + G     RL N+    S  G +    + ARA+  GK+ +EL+ +L   +  +   A  A+ K++G SS     ++V    + Y F
Sbjct:    2 ADDLGAIGSFFFYVFIVHPATAWILRPGRFERSKSIMYAIAFLAALAAVKTGIEMNEKGPNHYSLLNVDRASSPLDIKRAYKKLSLVLHPDKNDAPDAEEQFDNLKKSYDVLIDMEYREVYNKFGAAGIESNKRFDESTFFMELGVFYVTWGIMVYMLTLGKKSGEARQWTFTGLILMLVIEIAIMTST--ENPLPEWLFPTTTEYEMIWLLHTLFPAFMNGCRSMGSYLYVDLDEKQRALLKALQEQNQDILLVLRDVQIGIQNLQTSGVSSGPRLGNSTLTPSTAGLSAASDVTARATPTGKI-KELQNRLQPNKPNIAPTANQAQAKNTGSSSLGFYGMIVAYVAISYMF 351          
BLAST of mRNA_P-fluviatile_contig8.14622.1 vs. uniprot
Match: A0A7S4K575_9STRA (Hypothetical protein n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A7S4K575_9STRA)

HSP 1 Score: 315 bits (808), Expect = 3.210e-102
Identity = 170/361 (47.09%), Postives = 234/361 (64.82%), Query Frame = 1
Query:   97 MSDSA---DSAGALGTLFFYVFFVHPVCAWILAPKRFRKDRAIVYAILFLATIAFGKLALENAQRGPNYYQLLGLRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADKFSKMSAALEILMDSEKREIYDKLGPEAAASKHPFNENTMLLEMAVWYITWGVLAYVMTLGKSNGQARDWVFTGQIVMLAAEVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLGTHLYVDVDQQTRDMLLALRAGHQDVLVVLRDIQGSINSL-ASGGXXXARLANNSAGGSAGTRA-----LPARASAVGKLNRELEEKLTRTRTGVDAVAAEIKDSGKSSGSMQW--LLVGVWVVFYFF 1146
            MSD A   D    L   FFYVF VHP  AWIL P RF + ++I+YAI FLA +A  K  LE   +GPN+Y  L + R S+ + IKRAY++LSL+LHPDKNPS  A+D+F ++  A ++LMD E RE+Y+K G E   S   F+E    +E+AV+Y+TWG++ +V+TLGK +G AR W FTG IVML  E+AI+T+      LP+ LFP   EYEVVW++HS+FPA+MNGCRSLG  LYVD+D Q R +LLAL+  ++D+L+VLRD+Q  + S+ A+GG    RLA   AGG +   A     +P RA+  GKL +EL+++L  + T V     E+K  G  + S  +  +++G     Y F
Sbjct:    1 MSDDASGGDDLAGLSGFFFYVFIVHPATAWILRPGRFERKKSIMYAIAFLALLASVKTGLELNAKGPNHYVKLSVTRSSNPLAIKRAYKKLSLQLHPDKNPSPTASDEFDEVKQAYDVLMDMEFREVYNKFGQEGINSNKRFDETQFFIELAVFYLTWGMMVFVLTLGKKSGDARQWCFTGMIVMLVVEIAIMTSQSNP--LPTSLFPQSTEYEVVWLMHSLFPAFMNGCRSLGAFLYVDLDAQARQLLLALQEQNKDILLVLRDVQIGVQSVQANGGGSGGRLA---AGGLSTVGAPMQVGVPMRATPTGKL-KELQDRLQSSNTSVVKAVDELKSEGSKNSSFGFYAMIMGYIAFSYLF 355          
BLAST of mRNA_P-fluviatile_contig8.14622.1 vs. uniprot
Match: A0A1E7FEZ0_9STRA (DnaJ-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEZ0_9STRA)

HSP 1 Score: 315 bits (807), Expect = 4.700e-102
Identity = 159/352 (45.17%), Postives = 231/352 (65.62%), Query Frame = 1
Query:  109 ADSAGALGTLFFYVFFVHPVCAWILAPKRFRKDRAIVYAILFLATIAFGKLALENAQRGPNYYQLLGLRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADKFSKMSAALEILMDSEKREIYDKLGPEAAASKHPFNENTMLLEMAVWYITWGVLAYVMTLGKSNGQARDWVFTGQIVMLAAEVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHSIFPAYMNGCRSLGTHLYVDVDQQTRDMLLALRAGHQDVLVVLRDIQGSI-----NSLASGGXXXARLANNSAGGSAGTRALPARASAVGKLNRELEEKLTRTRTGVDAVAAEIKDSGKSSG-SMQWLLVGVWVVFYFF 1146
            +D    LG  FFYVF VHP+ AWIL P RF + ++I+YAI FLA +A  K  LE  Q+GPNYYQ+L + R S+ +EIKRAY++L L+LHPDKNPS DAAD+F ++  A +ILMD E R++Y+K G E       ++E   L+E+A++Y++W V+A+++T+GK +GQARDWVFTG IVML  EV ++T+   D  +P+WL P + E ++V I+HS+FPA+MNGCRSLG+ L+VDVD Q R  LLAL+  ++D+L+VLRD+Q  +     N ++ GG     L +           +P +A+  GK+ REL+++L  +   V      +K   KSS      +++G  V+ Y F
Sbjct:    9 SDDFSGLGGFFFYVFLVHPITAWILRPGRFERKKSIMYAIAFLAALAAVKTGLEIQQQGPNYYQILDVTRESNPLEIKRAYKKLGLKLHPDKNPSPDAADEFDRVKQAYDILMDLELRDVYNKFGKEGVRDNKRYSETQFLIEVAIFYVSWAVMAFLLTMGKKSGQARDWVFTGLIVMLVVEVVVMTSQ--DNPIPTWLLPTVTERDIVRIMHSLFPAFMNGCRSLGSFLFVDVDAQLRQFLLALQEQNKDILLVLRDVQIGVQNIQANGISGGGFGGGPLQSTGNIPVTTEGGIPTKATPTGKI-RELQDRLQYSNATVAQAVQSLKTENKSSNLGFYGMIIGYIVISYLF 357          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14622.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Q7_ECTSI2.090e-22789.04Heat shock protein 40 like protein/ DnaJ domain co... [more]
A0A6H5K8B0_9PHAE1.380e-16382.86HSP40 like protein n=1 Tax=Ectocarpus sp. CCAP 131... [more]
A0A6U1ZV61_TRICV1.580e-10646.52Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6U0IH11_9STRA2.870e-10646.45Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2V6D8_9STRA2.010e-10445.82Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1Z5JP57_FISSO5.770e-10446.98DnaJ homolog subfamily C member 10 n=2 Tax=Fistuli... [more]
A0A448Z810_9STRA5.650e-10345.68J domain-containing protein n=2 Tax=Pseudo-nitzsch... [more]
A0A7S0GF48_9STRA6.800e-10344.48Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S4K575_9STRA3.210e-10247.09Hypothetical protein n=2 Tax=Odontellaceae TaxID=2... [more]
A0A1E7FEZ0_9STRA4.700e-10245.17DnaJ-domain-containing protein n=1 Tax=Fragilariop... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3290268..3297694 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score635.2
Seed ortholog evalue2e-179
Seed eggNOG ortholog2880.D7G2Q7
EggNOG free text desc.heat shock protein binding
EggNOG OGsCOG0484@1,KOG0712@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionDnaJ domain protein
Ec32 orthologEc-11_003130.1
Exons7
Model size1168
Cds size1167
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817257.6111515-CDS-P-fluviatile_contig8:3290267..32904241622817257.6111515-CDS-P-fluviatile_contig8:3290267..3290424Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3290268..3290424 -
1693571765.8604546-CDS-P-fluviatile_contig8:3290267..32904241693571765.8604546-CDS-P-fluviatile_contig8:3290267..3290424Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3290268..3290424 -
1622817257.622177-CDS-P-fluviatile_contig8:3291143..32912951622817257.622177-CDS-P-fluviatile_contig8:3291143..3291295Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3291144..3291295 -
1693571765.8725822-CDS-P-fluviatile_contig8:3291143..32912951693571765.8725822-CDS-P-fluviatile_contig8:3291143..3291295Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3291144..3291295 -
1622817257.6319714-CDS-P-fluviatile_contig8:3293170..32932991622817257.6319714-CDS-P-fluviatile_contig8:3293170..3293299Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3293171..3293299 -
1693571765.8818567-CDS-P-fluviatile_contig8:3293170..32932991693571765.8818567-CDS-P-fluviatile_contig8:3293170..3293299Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3293171..3293299 -
1622817257.6424427-CDS-P-fluviatile_contig8:3293845..32940371622817257.6424427-CDS-P-fluviatile_contig8:3293845..3294037Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3293846..3294037 -
1693571765.894537-CDS-P-fluviatile_contig8:3293845..32940371693571765.894537-CDS-P-fluviatile_contig8:3293845..3294037Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3293846..3294037 -
1622817257.652177-CDS-P-fluviatile_contig8:3294690..32947891622817257.652177-CDS-P-fluviatile_contig8:3294690..3294789Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3294691..3294789 -
1693571765.9044993-CDS-P-fluviatile_contig8:3294690..32947891693571765.9044993-CDS-P-fluviatile_contig8:3294690..3294789Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3294691..3294789 -
1622817257.6645043-CDS-P-fluviatile_contig8:3295369..32955461622817257.6645043-CDS-P-fluviatile_contig8:3295369..3295546Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3295370..3295546 -
1693571765.9135127-CDS-P-fluviatile_contig8:3295369..32955461693571765.9135127-CDS-P-fluviatile_contig8:3295369..3295546Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3295370..3295546 -
1622817257.6748068-CDS-P-fluviatile_contig8:3297433..32976941622817257.6748068-CDS-P-fluviatile_contig8:3297433..3297694Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3297434..3297694 -
1693571765.9289124-CDS-P-fluviatile_contig8:3297433..32976941693571765.9289124-CDS-P-fluviatile_contig8:3297433..3297694Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3297434..3297694 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14622.1prot_P-fluviatile_contig8.14622.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 3290268..3297694 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14622.1

>prot_P-fluviatile_contig8.14622.1 ID=prot_P-fluviatile_contig8.14622.1|Name=mRNA_P-fluviatile_contig8.14622.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=389bp
ARSASSTFLHRPHIQLEDRVFLQQPDARPHAKMSDSADSAGALGTLFFYV
FFVHPVCAWILAPKRFRKDRAIVYAILFLATIAFGKLALENAQRGPNYYQ
LLGLRRGSSAIEIKRAYRQLSLELHPDKNPSQDAADKFSKMSAALEILMD
SEKREIYDKLGPEAAASKHPFNENTMLLEMAVWYITWGVLAYVMTLGKSN
GQARDWVFTGQIVMLAAEVAIVTTPGGDGVLPSWLFPHMAEYEVVWILHS
IFPAYMNGCRSLGTHLYVDVDQQTRDMLLALRAGHQDVLVVLRDIQGSIN
SLASGGGGGARLANNSAGGSAGTRALPARASAVGKLNRELEEKLTRTRTG
VDAVAAEIKDSGKSSGSMQWLLVGVWVVFYFFLNNGGS*
back to top

mRNA from alignment at P-fluviatile_contig8:3290268..3297694-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14622.1 ID=mRNA_P-fluviatile_contig8.14622.1|Name=mRNA_P-fluviatile_contig8.14622.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7427bp|location=Sequence derived from alignment at P-fluviatile_contig8:3290268..3297694- (Porterinema fluviatile SAG_2381)
GCCCGCTCTGCATCAAGCACCTTTCTCCATCGCCCACACATACAATTGGA GGACAGGGTCTTCCTCCAGCAGCCGGACGCTAGACCGCACGCAAAGATGT CGGATTCGGCGGATTCGGCTGGGGCGCTGGGCACCCTCTTCTTCTATGTG TTTTTCGTGCACCCGGTTTGTGCGTGGATTCTGGCGCCCAAGCGCTTCCG CAAGGACCGAGCCATCGTCTATGCCATCCTCTTCCTGGCCACGATAGCTT TCGGCAAACTGGTGCGTGCCATCACACACCCTGGGGAAGACGGGAGAGAG GGGGGTTGATGAAGTAGTCAGGAGTTGATGCAGCGGTCTGTGGAGCAAAA GGCCGATGTAGTAGGCAGGATAGTGGTCAAGAGCGAAGCGGGTATTTTTG CCCTTCGTGGCAGTCCTGAGTTCTGGTTTCTGTTCGACTCTGTAGGGGTG AAAGATGTTATGAGGGCGTCGTTCATGAAACACGAAACATTTGCGCATGG ACCCTGTTGCTGCCCACATTCCTCAGCCCAGACCACAAACGCGTACAGCA CACCACGCCCTGGTGTGGAGCAGAAAGTAGCGGGAACTTCCCCTGATGAT CGCCCGTGAGGCTTGGCCTCACACTTTTTCTTCGTTTGGCTACAGTTATT TGTGAGACGCAGATCGCCAATGCCCTTCAACAACCCAACGTTTCAAAGTG TGTGTTGTATGTCGTGGTGCTCTCTACCCCAACAACCCCGAGGAATCACA ACCTGGATGTTTGTCGGAGCCCTGAGTTACCCAAATGGTAACAGGGCAAC CCGGCTCTACTTTCTGCGGGTAGGGAGCGCTAGAGCAAGTGTTTGCAGCA GGCAATTCTCGAGTATCGCTACTTTGTGCAGCCTTGATCAGCATTTCAGT ACTGAGGGCCAGTTTTCACGTGGGAATGTTATGAGGTTTTCCCTCCTGTT GGGGCTGCGTGGATCTGGTCCGAACGCAGACACACGAATCCGGCGTTGCT GCTGTGCGTAGAATCATCACCACTATATTTAGCTTTTGCCGGACCAAAGC CGGCGATCTTTGTCTCTAGCCCGCGCCTAAACCAAAACGGCCAGCGCTCG CATTTCCCAGGCACACATGAAGGTTCATCCGCGTTTTCCGTTCACAGCAC GAGGAGGGTAGTGGAATCAATCCTTGAACTCAACACGGCTGTCCTTCCAT TTCATCGTTCCATTAAATTGGCCAAAAACTCGGCATTCGTCGGGATCCTC CGAATGTCTTTCGACGCACTGAATGAAATGAAAAAATGGCGTAGTAAAAC CGCCGCCAAAGAAGCATGGTGCTGCATTGACGAGGCTTGAATCCACCGCA CACACACTCAGGTACGGGTGTGTGCCCGAGGGTGCGCCGTGTGACTACTT GCGCCTGTGCGTGCGTGTGGAGCTGTGGGTGTGTGTCCTATGCGTAGAAG CTGACCAATCAATGAGTCCTTCCGGCGGACCAATCCCTTGGTCCTTCCGG CCGAGTAAATCGTCGCGAAACCCTTCTTTTTTCACTTCGTGTGATCCTTC CCAGGATCCACTTCTTTTTCTTCTGGTTGTCGTTTGACCTCAATGGAGTT ACATTTGATAGCCTGTGACCACGGAATCGATTCGCTTGGATAGGGTACGG ACACTTTAAGGAACTGGAGGTGGTCCGAAAAAAATTTGGGATGAGACCCA CAAAATCAAAACATCAACTACAACTACAACTACAACTACAACTACAACTA CAACTACAACAGCTCTGACCAGCGTCTGACTCAGTCTCAGCGACAAGTGT TTAGAGCTTCGTCTGGGACGTGGGACCATTTTGCCTCTGGGAGGGGGGGT TGTGAGCGCGAGAAGGAAAACCGTCCCCCGTACTGTTGAACAATGACTTG CTGGTGCCGCTCGGTGTTCTGGAGTAAATCGGGCATCGGCTGTCAAAATG CAGACCGGCGATTTTCTTCAGGCGGTGATGAACGTTATTTTTCAAAACCA GGTTCCAGTACCCGGCGCATATGGCCATGAATGACATGAGTTTCCCGGGA AACTCGAAACTCTGTTTTTTCTCTTGACTGCCAGCCACCGTCGCTGTTAA GGCCTTTGCTGCCGCTGCTCCTGCTGCTGCTGGTGTCGCTATCCCCAGGC GTTGGAAAACGCCCAGAGAGGGCCAAACTACTACCAGCTCTTGGGCTTGC GGCGAGGGAGCAGCGCGATCGAGATCAAGAGAGCGTATCGGCAGCTGTCG CTCGAGCTGCACCCGGACAAAAATCCTTCCCAGGACGCCGCGGACAAGTT TTCCAAGATGAGCGCCGCGCTGGAGGTGACTCGAATGAGGGCTTGGACGA AGACTAGACGATATGTTTCACTACGGAGATGCAGAACTGACATCCAATTC TGTTGTTATTTTCTCCCGCGGCCCACAGTTGTCGCCCCACCGCACCATCC CCCGCCGTTTTAGACCCGTTGGCCGCACCCCTACGGTCCACAGCTCTAGG CAGAGCGATTTGTATGAACAGCAAGACGGCGAGCACCGTCCCTCCGAGTA GATTAAACTTTTAAGCAAACAACCTGTGGCCGTATGGGGGCGCCGCAGAT ACGTTCATAGTTCATGCGGCGGTGCTGTTCTGGCCTGATCCCGACGTACT CGCAACAAGAGTGAGATAAGCTAAGCATCATGTTTTACCTTGACGTTCTT GCCGGATCCTCTTGCAGAAAGTGCGAGATTCGCCAGTTGTTCTTCACTAT GCTGTGCCATGCCTGTCAGATCCTGATGGACTCGGACAAGAGATATGCCG AATAAACATACTTTTTTTTTCGCCGTGTCAAACAGATCCGATGGACTCGC AGGAAGAGGGCGACGCACTTACCACTCTTTTGCTTTTTCTTTTCGTGCGT ATCAGATCCTGATGGACTCTGAGAAGAGGGAGATTTACGACAAGCTCGGG CCGGAAGCGGCGGCGTCCAAGCACCCGTTCAATGAGAACACCATGCTCCT CGAGGTGAAGTGCGTGTATTTACTAACAATACAATAGAGCGGAAAATAGC GAGGACTCCGCTTGTTGCCTTCCATCTGTGTGACAACAGCTTGTATGCCT ATGTTTTTTCAAAAGGTGACCCTCGGCGCCAGCTGGATGCAGCTAGTAAT AGAACACAAACACCAGTGACAAAATATGCAATACAGCAGGAGCTGGGACA GCAGAGAATTCCGGTTGGCATTAAAGGTAGCACTAGCATTCGCAGAAGGA GCAGCAGCAGCAGTACAGTTAGCAAAAGAAGGCGACTGCAGCGGAAGGTA GACGTCGTGGTGGTGATGCTGTGCACACACGCACGGCCAGGGGATAGAAT CCCTACTTTCGGCGACATGCCGCAGTGAATCTGTGCGTACGAAATGACTC TCCATCGCCGTTCAGCAGGTGCATAGCGCCGCACTCTGGTTGTTGCTTTT CTGGCCCAGCTGGGAGTGTCGCACCCCGCCCAGTCGAACGCCGAGCGACC AGCGAGTGACGCGCGTTTGCGGGAACGACCGATCATCGCTTCAAGAGCAA GGTGCTGCATACAAACCACGACCTCAAAAACTACTCCAACCCGCTCGCTC ACCACGAAACCCCCCCTCCCCCTTCCCCGCCCCCTCCCACCCCGTGATTT GTATTAGATGGCCGTGTGGTACATCACGTGGGGGGTGCTCGCGTATGTGA TGACGCTGGGCAAGTCTAACGGGCAGGCTCGGGACTGGGTGTTCACGGGG CAGATAGTCATGCTTGCCGCGGAGGTTGCCATCGTCACCACCCCCGGGGG CGACGGTGTGCTCCCGTCGTGGCTCTTCCCTCACATGGCGGAATACGAGG TACAGGGGTTTCGTTGTTGTTGCTGTTTTTGTTGTTGCGGTCGTCGTTGT TGTAGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTATCTTTACATCAG AAACCTTTCCGATCGCTTCCCCGCACCCTCAAGTATCCGCCCCGGTCTAT CTTGCCGAATTGACTGCCATGGTTACAGCGTCAAGACTTCCTCGTTGGGA ATAAAGGAAGAAGAAAATGCAAGTGGACCCCAAAGAAGCGTGGGATGGCC CTGCTTTCGGATCGGGCATGGGTGGTGGTTGCTGGTTGGACATCCTTTCC CTTACTGTAGCCATGTGTTCCGTCTGCATAAGGTTCGGCCTTAACAAATT AGAGTTGTGGTAGGAGAGAATCGCAATTGCAGCTCCCGGTTCACAGGGAC GCTGCCCCGGCGCTTTAGAAGGATTCTGGTCGCTGCGGTGATGCGCTCTC CTTCGTTATTGTGGAGCACGACTGAGCATAGTTTGCAACTCCCCGCCCAA ATTTTATCATGATTCATGCCGCGCGTGTTCACGTCTCTATCTTAGGTGGT TTGGATCTTGCATTCCATCTTCCCCGCCTACATGAACGGCTGCCGATCTC TCGGGACTCACCTTTACGTCGACGTCGACCAGCAGACGAGGGATATGCTG CTGGCTCTCAGGGCGGGGCACCAGGTGAAGTGAAACGTGGCGTTGTTGTC GAATGCTTCCATAATGTTGGAATCCCAGTGTATTTTGTATTTATGTTATC AATTCGGTGTCCAGGTGAGGCACAGATCGATGGCTTCCTTGAAGTTTGTG GACTGACTCTCTTGGCTGTGTTTTGCATGCTCTCGCTTGGTCTTCTAGCA TTTATTTTGTTTCCGTGATAGTCATGCGGGGCCTTACAGGTCATCAGGCG GTTCCCTCTTCACGTTGCGTTGCGTGGAGTGCACACCGGGATCTTCTCTC ACCATGAGAGAGGGAGACATGAGCGCTGGAAAGGGCAACGCTCTTGGGCT GCTCTTTCTTGCTCAGAGAAGGTTTTGCGACCGTTCCCTGGAATGTGCTG AACCAACTCTCTGGCTCTGCAATCTGTGAAACATCCGTTGTAGATACGAG TGACGGGTCATCTATGACGTCACCATTTACAGGCACTATCTGGTGGCCTT AATTCCATCATTCCTTGTTTTTAACTCTTCAGGTTAATACGGCGAGGTAC ACAGGGTGAGAGCCCGATCACTGACTTCGCATGAAGTTATCGAACTCTCG TGTTTGTAATGTTCATTGCAATCATTATCTTCAATGAAGCAAAATTCCAG CCTCTGGGATGCACGCGTGTCAACGGGTATGTCTCCATTCCGCACCATTC CTGGGAACATGCCGTACCATTCCTTGAAACGATGCCATTCCGATATTCGT TGTACAGGCGCCCCGCTCCATGTCACAATGCTTTCCCCTCTCGTCCGAGA CATTCTGTCTCGCCCCACATCTGCCTCTGATCAATCCGGTCCTGCGTATT CAACAGCCTAACGACACCCTTACTCTTGTAGTACTCTCTCACACCCGTTG TGAGCGCCGAGAGAGATGAAGCCTTCCTGCCGCGGAGCAAGAGCGACTAC CCCTGTCTAGCGTGGACCAAGGGTCGTCAGAGAGACCTGTCGCCATTACT GCTCTGGAGCATCTGTTCCAGCGCGCTGATCCACGCTTCACCGTGGCTGA TCAGTTCCCGTTAAATTGGAAAGCGTACTACCAACAGCAAACGCCAACGG GCGGTTGAAGTCGCTCTTGGTGTTGCGCTTTCCAATTTTGGTAGCCATGA TGACGTCGAGTCGGCGCGCTTGAGCAACGACTCCCTGCTGAGGATATAGC AACAGGCTCTCTGACAACACTTCCGTGTGCCTGCGTGTTGACACCGGGCA GAGGTTGCTCTGCTCTCTTCGCGGCAGGAAGATTTATTATCTCGGATCTC ACTCGGGTGCGAGGGTCCTACGAGAATCACCGCTGCCGTAGATGGTCAGT GGGTGACGCAGGATACGAGAGTGGCAATTGACAGGTCTCGGAAGAGCCAG CCGAAGCAAGCAGTACTGGCAGCGCATGCGCTCACCTTTTGAATTGTGAA AGAAAGACGCGCAGAGCTTCCTAGGGAGGGGATATCTTCCCGTTCGATAT TTTTGTGGGCTCCCGACATGCTCTACAAACAGCACCATACACACGGAATA TACGCGCATACACTTGGAATACACGCATGCTTACACGTGTACCTGTTTAC CGTGGAGGGAGGGCTTGGTACCAGCAATCCTCAGCCGCGAAGTTTCGGGT AAGATCCCTCCGGTCATGTGTTGTTCTTTCCGCGTGCAGAGATGAACATT TTCCCCCTCACACCCCTCTCACACCCATGCGGCGCCCCCGTTTCCGTCTC TTCTCCAAGCGCGCTTGCCTCCGCCTCCGCCTCCGCCAGTCTCCATCTTC TCCGACTGAATGCCATTGCGGCGTCCCCCTTCCTCACCTTCGCTCACCTC CGCGCGCGCTCCGACCGTCTGGCGGAAACCTCCTTCTCCGTTGGCACAGG ACGTCCTCGTAGTACTGCGCGATATTCAGGGCAGCATCAACTCGCTCGCC TCGGGCGGCGGCGGGGGCGCCCGGTTGGCGAACAACTCGGCCGGGGGCTC CGCAGGAACGAGGGCACTCCCCGCGAGGGCGTCGGCCGTGGGCAAGCTCA AGTATGCGCCGGTCGGGGAGAGTCGTTCGGCTCGAGAAACAGTAATTTGG AGTTTTGTGGAGGCGTACCGTGTCTCATCCACCGCGCACGTCCCTTTGGC ACCGACTTGCGTCGACTGGATGATTCTCTAACAAATCATAGACCGACTCC ATCGATGGGTGCTTCAAGAACACAGGACAAACTTGAATCTATTAATGTGC TGCTTCCCGAGCCATCTCGTCCATAGTTTCTTCTCGGTCTACCGTGAATC GATCGGTGTTCTCACCTTTTTCATGGTCGTCGAGGGGTCGAGCGGTGGAA GTGGTTCGAGGTTGGGCGAAAACTCGCGTTTTTGCTACCGGCATCAATCG AACTTGGTCGGCAGAAAGTTAGATACTCCGGAGTAGATAGGTAGATGGAT AGGGGGATACGTATGAACTAAATAGAGAAGGTAAATAGAGATAGAACGAT GGATGGAAAGATAGCCAAGGGGCCCTTTTCTCTGCCTGCTCGTAATTCAG TGGTGTGGTGTGGTGTGGTGTGTCCGGCAGTGACGATATCCCCCGCTCTG CTTCATTTTCGAAGAGCGTCATCGTTTCCTCGTTGAGTTTTGTCTTTTTA TACGTTTGAGAGTTAGCCACAACAGTTGCACTTTCTCCCTCTCATTCTCT CGTTCTCTCTATCTGTACCTTTCGCTCCTTGGCCCACTTTTGTCATCGAT TTTTTTTGTCCCTCCTTAAGCAGGGAGTTGGAAGAGAAACTGACCCGAAC CCGCACAGGGGTCGACGCGGTGGCGGCGGAGATTAAGGACTCGGGCAAGT CCAGCGGGAGCATGCAGTGGCTGCTCGTGGGAGTTTGGGTTGTGTTCTAC TTCTTTCTCAACAACGGCGGGTCGTAG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig8:3290268..3297694-

>mRNA_P-fluviatile_contig8.14622.1 ID=mRNA_P-fluviatile_contig8.14622.1|Name=mRNA_P-fluviatile_contig8.14622.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2334bp|location=Sequence derived from alignment at P-fluviatile_contig8:3290268..3297694- (Porterinema fluviatile SAG_2381)
GCCCGCTCTGCATCAAGCACCTTTCTCCATCGCCCACACATACAATTGGA
GGACAGGGTCTTCCTCCAGCAGCCGGACGCTAGACCGCACGCAAAGATGT
CGGATTCGGCGGATTCGGCTGGGGCGCTGGGCACCCTCTTCTTCTATGTG
TTTTTCGTGCACCCGGTTTGTGCGTGGATTCTGGCGCCCAAGCGCTTCCG
CAAGGACCGAGCCATCGTCTATGCCATCCTCTTCCTGGCCACGATAGCTT
TCGGCAAACTGGCCCGCTCTGCATCAAGCACCTTTCTCCATCGCCCACAC
ATACAATTGGAGGACAGGGTCTTCCTCCAGCAGCCGGACGCTAGACCGCA
CGCAAAGATGTCGGATTCGGCGGATTCGGCTGGGGCGCTGGGCACCCTCT
TCTTCTATGTGTTTTTCGTGCACCCGGTTTGTGCGTGGATTCTGGCGCCC
AAGCGCTTCCGCAAGGACCGAGCCATCGTCTATGCCATCCTCTTCCTGGC
CACGATAGCTTTCGGCAAACTGGCGTTGGAAAACGCCCAGAGAGGGCCAA
ACTACTACCAGCTCTTGGGCTTGCGGCGAGGGAGCAGCGCGATCGAGATC
AAGAGAGCGTATCGGCAGCTGTCGCTCGAGCTGCACCCGGACAAAAATCC
TTCCCAGGACGCCGCGGACAAGTTTTCCAAGATGAGCGCCGCGCTGGAGG
CGTTGGAAAACGCCCAGAGAGGGCCAAACTACTACCAGCTCTTGGGCTTG
CGGCGAGGGAGCAGCGCGATCGAGATCAAGAGAGCGTATCGGCAGCTGTC
GCTCGAGCTGCACCCGGACAAAAATCCTTCCCAGGACGCCGCGGACAAGT
TTTCCAAGATGAGCGCCGCGCTGGAGATCCTGATGGACTCTGAGAAGAGG
GAGATTTACGACAAGCTCGGGCCGGAAGCGGCGGCGTCCAAGCACCCGTT
CAATGAGAACACCATGCTCCTCGAGATCCTGATGGACTCTGAGAAGAGGG
AGATTTACGACAAGCTCGGGCCGGAAGCGGCGGCGTCCAAGCACCCGTTC
AATGAGAACACCATGCTCCTCGAGATGGCCGTGTGGTACATCACGTGGGG
GGTGCTCGCGTATGTGATGACGCTGGGCAAGTCTAACGGGCAGGCTCGGG
ACTGGGTGTTCACGGGGCAGATAGTCATGCTTGCCGCGGAGGTTGCCATC
GTCACCACCCCCGGGGGCGACGGTGTGCTCCCGTCGTGGCTCTTCCCTCA
CATGGCGGAATACGAGATGGCCGTGTGGTACATCACGTGGGGGGTGCTCG
CGTATGTGATGACGCTGGGCAAGTCTAACGGGCAGGCTCGGGACTGGGTG
TTCACGGGGCAGATAGTCATGCTTGCCGCGGAGGTTGCCATCGTCACCAC
CCCCGGGGGCGACGGTGTGCTCCCGTCGTGGCTCTTCCCTCACATGGCGG
AATACGAGGTGGTTTGGATCTTGCATTCCATCTTCCCCGCCTACATGAAC
GGCTGCCGATCTCTCGGGACTCACCTTTACGTCGACGTCGACCAGCAGAC
GAGGGATATGCTGCTGGCTCTCAGGGCGGGGCACCAGGTGGTTTGGATCT
TGCATTCCATCTTCCCCGCCTACATGAACGGCTGCCGATCTCTCGGGACT
CACCTTTACGTCGACGTCGACCAGCAGACGAGGGATATGCTGCTGGCTCT
CAGGGCGGGGCACCAGGACGTCCTCGTAGTACTGCGCGATATTCAGGGCA
GCATCAACTCGCTCGCCTCGGGCGGCGGCGGGGGCGCCCGGTTGGCGAAC
AACTCGGCCGGGGGCTCCGCAGGAACGAGGGCACTCCCCGCGAGGGCGTC
GGCCGTGGGCAAGCTCAAGACGTCCTCGTAGTACTGCGCGATATTCAGGG
CAGCATCAACTCGCTCGCCTCGGGCGGCGGCGGGGGCGCCCGGTTGGCGA
ACAACTCGGCCGGGGGCTCCGCAGGAACGAGGGCACTCCCCGCGAGGGCG
TCGGCCGTGGGCAAGCTCAACAGGGAGTTGGAAGAGAAACTGACCCGAAC
CCGCACAGGGGTCGACGCGGTGGCGGCGGAGATTAAGGACTCGGGCAAGT
CCAGCGGGAGCATGCAGTGGCTGCTCGTGGGAGTTTGGGTTGTGTTCTAC
TTCTTTCTCAACAACGGCGGGTCGTAGCAGGGAGTTGGAAGAGAAACTGA
CCCGAACCCGCACAGGGGTCGACGCGGTGGCGGCGGAGATTAAGGACTCG
GGCAAGTCCAGCGGGAGCATGCAGTGGCTGCTCGTGGGAGTTTGGGTTGT
GTTCTACTTCTTTCTCAACAACGGCGGGTCGTAG
back to top