mRNA_P-fluviatile_contig8.14619.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14619.1 vs. uniprot
Match: D7G2R1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R1_ECTSI) HSP 1 Score: 154 bits (388), Expect = 4.090e-39 Identity = 107/208 (51.44%), Postives = 129/208 (62.02%), Query Frame = 3
Query: 3 AALLLVAGAIQADAFAVAPVTAGRPTPSPSQVSARSDVFKLNLSPYEEYMAKRGQTVNAP-PAPSAPXXXXXXXXXXXXRPSSGSKWSPRPDWKTSKAPSAKTSYAKVSDPRGSRASAPSKPAA----PSYSPPAPAPRDSVVPESP-------------RAAEPGGKHVGTGGMADTRDPAPLKHEDPRKSIAAAPTFEEYLKSKRN 572
A +LL+A AIQADAF VAP AG+ + ++V AR DVFKLNLSPYEEYMA RG +AP PAP+AP XX GSKW P+ DWK++KA S+K SYA A++P P A P+Y+PPA A P +P A+ G KH+GTGGMADTRDP L HEDPRKSI+AAP+F EYLKSK+N
Sbjct: 12 AVILLLAAAIQADAFMVAPAAAGKVSAG-NKVEARGDVFKLNLSPYEEYMASRGGGSSAPAPAPAAPSSPARSAVSSXXSSGGGSKWQPKADWKSAKA-SSKPSYAPA-------AASPRPPTARXXXPAYAPPA-AXXXXYTPPAPYXXXXXXXXXXXXXXAQAGEKHIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSKQN 209
BLAST of mRNA_P-fluviatile_contig8.14619.1 vs. uniprot
Match: D7G2R0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R0_ECTSI) HSP 1 Score: 79.7 bits (195), Expect = 4.980e-12 Identity = 59/143 (41.26%), Postives = 73/143 (51.05%), Query Frame = 3
Query: 249 GSKWSPRPDWKTSKAPSA------------------------KTSYAKVSDPRGSRASAPSKPAAPSYSPPAPAPRDSVVPES-----------PRAAEPGGKHVGTGGMADTRDPAPLKHEDPRKSIAAAPTFEEYLKSKRN 572
G KW PRPDWK+S +A K ++ +D +AS PAAP+Y+PPA P+AA+ KH+GTGGMADTRDP L HEDPRKSI+AAP+F EYLKSK+N
Sbjct: 275 GKKWEPRPDWKSSAGSAAPSRXXXXXXXXXXXXXXXXXXXXXKATFNPKADAPW-KASGGGAPAAPAYAPPAAXXXXXXXXXXXXXXXXXXXXXPKAADE--KHIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSKQN 414
BLAST of mRNA_P-fluviatile_contig8.14619.1 vs. uniprot
Match: A0A6H5JPP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP9_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 2.410e-11 Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 3
Query: 453 HVGTGGMADTRDPAPLKHEDPRKSIAAAPTFEEYLKSKRN 572
H GTGGMADTRDPAP+KHEDPRKSI AAP+F EYLKSKRN
Sbjct: 318 HKGTGGMADTRDPAPVKHEDPRKSIPAAPSFAEYLKSKRN 357
BLAST of mRNA_P-fluviatile_contig8.14619.1 vs. uniprot
Match: A0A835YLE0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLE0_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 7.450e-11 Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 3
Query: 450 KHVGTGGMADTRDPAPLKHEDPRKSIAAAPTFEEYLKSKR 569
KH G GGMADTRDP P+ HEDPRKSI+ APTFEEY+K K+
Sbjct: 34 KHRGVGGMADTRDPEPVDHEDPRKSISKAPTFEEYMKQKQ 73
BLAST of mRNA_P-fluviatile_contig8.14619.1 vs. uniprot
Match: A0A835YTB4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTB4_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 7.450e-11 Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 3
Query: 450 KHVGTGGMADTRDPAPLKHEDPRKSIAAAPTFEEYLKSKR 569
KH G GGMADTRDP P+ HEDPRKSI+ APTFEEY+K K+
Sbjct: 36 KHRGVGGMADTRDPEPVDHEDPRKSISKAPTFEEYMKQKQ 75
BLAST of mRNA_P-fluviatile_contig8.14619.1 vs. uniprot
Match: A0A7S1Z902_9STRA (Hypothetical protein (Fragment) n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z902_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 2.470e-10 Identity = 30/40 (75.00%), Postives = 36/40 (90.00%), Query Frame = 3
Query: 447 GKHVGTGGMADTRDPAPLKHEDPRKSIAAAPTFEEYLKSK 566
G H+G+GGMADTR+P L HEDPRKSI+AAP+FEEYLKS+
Sbjct: 32 GGHIGSGGMADTRNPDALNHEDPRKSISAAPSFEEYLKSR 71
BLAST of mRNA_P-fluviatile_contig8.14619.1 vs. uniprot
Match: A0A7S2MQH4_9STRA (Hypothetical protein (Fragment) n=3 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MQH4_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 2.710e-10 Identity = 29/38 (76.32%), Postives = 36/38 (94.74%), Query Frame = 3
Query: 453 HVGTGGMADTRDPAPLKHEDPRKSIAAAPTFEEYLKSK 566
H+G+GGMADTRDP ++HEDPRKSI+AAP+FEEYLKS+
Sbjct: 33 HIGSGGMADTRDPDAMEHEDPRKSISAAPSFEEYLKSR 70
BLAST of mRNA_P-fluviatile_contig8.14619.1 vs. uniprot
Match: D8LKW1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKW1_ECTSI) HSP 1 Score: 72.4 bits (176), Expect = 9.090e-10 Identity = 32/40 (80.00%), Postives = 36/40 (90.00%), Query Frame = 3
Query: 453 HVGTGGMADTRDPAPLKHEDPRKSIAAAPTFEEYLKSKRN 572
H GTGGMADTRDPAP+ H DPRKSI+AAP+F EYLKSK+N
Sbjct: 339 HKGTGGMADTRDPAPVNHADPRKSISAAPSFAEYLKSKKN 378
BLAST of mRNA_P-fluviatile_contig8.14619.1 vs. uniprot
Match: A0A7S2L5C2_9STRA (Pyruvate kinase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L5C2_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 3.150e-9 Identity = 30/43 (69.77%), Postives = 38/43 (88.37%), Query Frame = 3
Query: 444 GGKHVGTGGMADTRDPAPLKHEDPRKSIAAAPTFEEYLKSKRN 572
GG H+G+GGMADTR+P ++HEDPRKSI+AAP+FEEYLK + N
Sbjct: 35 GGGHIGSGGMADTRNPDTIQHEDPRKSISAAPSFEEYLKQRAN 77
BLAST of mRNA_P-fluviatile_contig8.14619.1 vs. uniprot
Match: A0A835YPW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPW3_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 5.050e-9 Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 3
Query: 453 HVGTGGMADTRDPAPLKHEDPRKSIAAAPTFEEYLKSK 566
H+GTGGMADTR+P P HEDPRKSI+ APTFEEYLK +
Sbjct: 147 HIGTGGMADTRNPDPKDHEDPRKSISRAPTFEEYLKQR 184 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14619.1 >prot_P-fluviatile_contig8.14619.1 ID=prot_P-fluviatile_contig8.14619.1|Name=mRNA_P-fluviatile_contig8.14619.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=142bp MAKRGQTVNAPPAPSAPAPAPASAPARASRPSSGSKWSPRPDWKTSKAPSback to top mRNA from alignment at P-fluviatile_contig8:3254156..3259530- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14619.1 ID=mRNA_P-fluviatile_contig8.14619.1|Name=mRNA_P-fluviatile_contig8.14619.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5375bp|location=Sequence derived from alignment at P-fluviatile_contig8:3254156..3259530- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:3254156..3259530- >mRNA_P-fluviatile_contig8.14619.1 ID=mRNA_P-fluviatile_contig8.14619.1|Name=mRNA_P-fluviatile_contig8.14619.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=852bp|location=Sequence derived from alignment at P-fluviatile_contig8:3254156..3259530- (Porterinema fluviatile SAG_2381)back to top |