mRNA_P-fluviatile_contig8.14614.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14614.1
Unique NamemRNA_P-fluviatile_contig8.14614.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14614.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3200829..3201425 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size545
Cds size543
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817216.959112-CDS-P-fluviatile_contig8:3200828..32010701622817216.959112-CDS-P-fluviatile_contig8:3200828..3201070Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3200829..3201070 +
1693571542.1975236-CDS-P-fluviatile_contig8:3200828..32010701693571542.1975236-CDS-P-fluviatile_contig8:3200828..3201070Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3200829..3201070 +
1622817216.9705122-CDS-P-fluviatile_contig8:3201124..32014251622817216.9705122-CDS-P-fluviatile_contig8:3201124..3201425Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3201125..3201425 +
1693571542.2073672-CDS-P-fluviatile_contig8:3201124..32014251693571542.2073672-CDS-P-fluviatile_contig8:3201124..3201425Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3201125..3201425 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14614.1prot_P-fluviatile_contig8.14614.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 3200829..3201425 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14614.1

>prot_P-fluviatile_contig8.14614.1 ID=prot_P-fluviatile_contig8.14614.1|Name=mRNA_P-fluviatile_contig8.14614.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=181bp
MEVRREGIQGAHAETTRRHLRSALFCRTCVIFRTRFRRTRSVLRSASHGA
AGGWCRSIPFLMSMTVMKTQSKSKHGATSSMGMMWFVRLRMGCERMHTHR
WVGTLRPGFENGSKNWKRDDCGSDRSWPIAVKLDLIFLKRSECPVVRNRS
HFVYVLSIASRHVRDGSDGDGTDAENFKMPK
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mRNA from alignment at P-fluviatile_contig8:3200829..3201425+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14614.1 ID=mRNA_P-fluviatile_contig8.14614.1|Name=mRNA_P-fluviatile_contig8.14614.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=597bp|location=Sequence derived from alignment at P-fluviatile_contig8:3200829..3201425+ (Porterinema fluviatile SAG_2381)
ATGGAGGTGAGGAGGGAGGGCATTCAGGGCGCACACGCAGAGACAACGCG
TAGGCATTTGCGCTCAGCGCTATTTTGTCGAACTTGTGTAATTTTTCGGA
CGCGCTTCCGACGGACCAGGTCGGTCCTTCGCAGTGCTTCGCACGGAGCG
GCGGGGGGATGGTGCCGATCGATTCCGTTCTTGATGTCGATGACAGTGAT
GAAGACTCAGTCCAAGTCAAAGCACGGGGCAACTTCAAGCATGCAATGGA
GAGTTGGTGCGGATTGGAAGATTTGGCACAATGTATCGTCATGTAGGGGG
ATGATGTGGTTTGTTCGGCTCCGTATGGGATGTGAGAGGATGCACACCCA
TCGGTGGGTTGGAACCCTTCGACCAGGCTTCGAAAATGGAAGCAAAAATT
GGAAAAGGGACGATTGTGGGAGTGACAGATCTTGGCCGATCGCGGTCAAA
CTAGACTTGATATTTCTGAAGCGATCGGAATGTCCGGTAGTGAGAAACCG
CTCCCATTTTGTGTATGTATTATCGATCGCATCACGACATGTGCGAGACG
GTTCAGATGGGGACGGGACTGATGCTGAGAACTTCAAAATGCCAAAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:3200829..3201425+

>mRNA_P-fluviatile_contig8.14614.1 ID=mRNA_P-fluviatile_contig8.14614.1|Name=mRNA_P-fluviatile_contig8.14614.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1086bp|location=Sequence derived from alignment at P-fluviatile_contig8:3200829..3201425+ (Porterinema fluviatile SAG_2381)
ATGGAGGTGAGGAGGGAGGGCATTCAGGGCGCACACGCAGAGACAACGCG
TAGGCATTTGCGCTCAGCGCTATTTTGTCGAACTTGTGTAATTTTTCGGA
CGCGCTTCCGACGGACCAGGTCGGTCCTTCGCAGTGCTTCGCACGGAGCG
GCGGGGGGATGGTGCCGATCGATTCCGTTCTTGATGTCGATGACAGTGAT
GAAGACTCAGTCCAAGTCAAAGCACGGGGCAACTTCAAGCATATGGAGGT
GAGGAGGGAGGGCATTCAGGGCGCACACGCAGAGACAACGCGTAGGCATT
TGCGCTCAGCGCTATTTTGTCGAACTTGTGTAATTTTTCGGACGCGCTTC
CGACGGACCAGGTCGGTCCTTCGCAGTGCTTCGCACGGAGCGGCGGGGGG
ATGGTGCCGATCGATTCCGTTCTTGATGTCGATGACAGTGATGAAGACTC
AGTCCAAGTCAAAGCACGGGGCAACTTCAAGCATGGGGATGATGTGGTTT
GTTCGGCTCCGTATGGGATGTGAGAGGATGCACACCCATCGGTGGGTTGG
AACCCTTCGACCAGGCTTCGAAAATGGAAGCAAAAATTGGAAAAGGGACG
ATTGTGGGAGTGACAGATCTTGGCCGATCGCGGTCAAACTAGACTTGATA
TTTCTGAAGCGATCGGAATGTCCGGTAGTGAGAAACCGCTCCCATTTTGT
GTATGTATTATCGATCGCATCACGACATGTGCGAGACGGTTCAGATGGGG
ACGGGACTGATGCTGAGAACTTCAAAATGCCAAAGGGGGATGATGTGGTT
TGTTCGGCTCCGTATGGGATGTGAGAGGATGCACACCCATCGGTGGGTTG
GAACCCTTCGACCAGGCTTCGAAAATGGAAGCAAAAATTGGAAAAGGGAC
GATTGTGGGAGTGACAGATCTTGGCCGATCGCGGTCAAACTAGACTTGAT
ATTTCTGAAGCGATCGGAATGTCCGGTAGTGAGAAACCGCTCCCATTTTG
TGTATGTATTATCGATCGCATCACGACATGTGCGAGACGGTTCAGATGGG
GACGGGACTGATGCTGAGAACTTCAAAATGCCAAAG
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