mRNA_P-fluviatile_contig8.14610.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14610.1
Unique NamemRNA_P-fluviatile_contig8.14610.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig8.14610.1 vs. uniprot
Match: A0A6H5KYU3_9PHAE (DSBA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYU3_9PHAE)

HSP 1 Score: 340 bits (872), Expect = 1.160e-110
Identity = 161/219 (73.52%), Postives = 193/219 (88.13%), Query Frame = 1
Query:   64 MTKFVVKIFSDNVCPWCYVGKKNLEAAIKQYTAQKSPSGTPPVYDIRWKPFFLNIESPETSEERIVEHLEKKYGIGAGSRMAASLHRAGQVVGIQFNNDRKVHNTIRSHRLVRLADSQQKGNQMIEELFHGYFEEGKNIADVGVLLDLADKAGVEVTREFLEGSEGKQEVISEYEKGIRSHGISGVPYFVISREGSSATVPLSGGQPPAAFIEAFEALS 720
            M KF +KIFSDNVCPWC+VGK+NLE A+KQ+ A++  + +PPV+D+RWKPFFLNIE+PETSE  I E+LEKKYG GAGSRMAASL  AG+  GI+FNNDRKVHNTIRSHRLVR AD Q KG +MI++LFH YFE+G+NIADV VLL+LA+KAGVE T+++LEG EG++EVISEY+ GI +HGISGVPYF++SREGS ATVPLSGGQPPAAF+EAFEALS
Sbjct:    1 MAKFNIKIFSDNVCPWCFVGKRNLETAMKQFAAREPSTQSPPVFDVRWKPFFLNIEAPETSELPITEYLEKKYGKGAGSRMAASLAMAGEATGIRFNNDRKVHNTIRSHRLVRFADGQGKGGEMIDQLFHAYFEQGRNIADVDVLLELAEKAGVECTKDYLEGKEGQEEVISEYKHGIHNHGISGVPYFIVSREGSKATVPLSGGQPPAAFVEAFEALS 219          
BLAST of mRNA_P-fluviatile_contig8.14610.1 vs. uniprot
Match: B7ZGN0_9PHAE (DSBA oxidoreductase n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGN0_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 5.420e-106
Identity = 156/220 (70.91%), Postives = 187/220 (85.00%), Query Frame = 1
Query:   64 MTKFVVKIFSDNVCPWCYVGKKNLEAAIKQYTAQK--SPSGTPPVYDIRWKPFFLNIESPETSEERIVEHLEKKYGIGAGSRMAASLHRAGQVVGIQFNNDRKVHNTIRSHRLVRLADSQQKGNQMIEELFHGYFEEGKNIADVGVLLDLADKAGVEVTREFLEGSEGKQEVISEYEKGIRSHGISGVPYFVISREGSSATVPLSGGQPPAAFIEAFEAL 717
            M KF VK+ SDNVCPWCYVGK+NLE+A+KQ+   +       PPV+D+RWKPFFLN++SPETSEE I E+LEKKYG GAGSRMA +L RAG+  GI FNNDR+VHNTIRSHRLVRLAD Q+KG  MIE+LFHGYFEEGKNIAD  VLL++A KAGVE T+E+LEG EG+QEV++EY+KG+++ G+SGVPY++ISREGS ATVPLSG QPP AF+EAFEAL
Sbjct:    1 MPKFNVKVISDNVCPWCYVGKRNLESAMKQFATSQPTEKEQEPPVFDVRWKPFFLNVKSPETSEEPIQEYLEKKYGKGAGSRMAVALERAGKSTGINFNNDRRVHNTIRSHRLVRLADQQEKGGDMIEQLFHGYFEEGKNIADSDVLLEIAQKAGVECTKEYLEGKEGQQEVLNEYQKGVQTQGVSGVPYYIISREGSKATVPLSGAQPPEAFVEAFEAL 220          
BLAST of mRNA_P-fluviatile_contig8.14610.1 vs. uniprot
Match: A0A835YGU7_9STRA (Protein disulfide isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGU7_9STRA)

HSP 1 Score: 174 bits (441), Expect = 5.770e-47
Identity = 99/210 (47.14%), Postives = 129/210 (61.43%), Query Frame = 1
Query:   91 SDNVCPWCYVGKKNLEAAIKQYTAQKSPSGTPPVYDIRWKPFFLNIESPETSEERIVEHLEKKYGIGAGSRMAASLHRAGQVVGIQFNNDRKVHNTIRSHRLVRLADSQQKGNQMIEELFHGYFEEGKNIADVGVLLDLADKAGVEV-TREFLEGSEGKQEVISEYEKGIRSHGISGVPYFVISREGSSATVPLSGGQPPAAFIEAFEAL 717
            S  VCPWC++GK+ LEAAI++         T       WKPFFL+  SP+ S   I  HL +KYG  AG+RMAASL  AG+  GI+F  DR V NTI SHRLV LA  Q K + +IE LF GYFE+G  ++ V  L+ +A+ AG+    R +LE  E +  V+ E     R  GI+GVP+FVI+R+G+   + LSG QP   F EAF+AL
Sbjct:   17 SPPVCPWCFIGKRRLEAAIRERGLGPKDVQT------TWKPFFLDANSPKDSGIPIGVHLRQKYGAQAGARMAASLAAAGEENGIKFKEDRTVQNTIMSHRLVHLAGKQGKQDAVIEALFSGYFEQGAKLSSVDTLVRIAETAGISGDVRAYLESGEDEDVVMREAFDSARRLGITGVPFFVIARDGNKERLTLSGAQPVDVFDEAFDAL 220          
BLAST of mRNA_P-fluviatile_contig8.14610.1 vs. uniprot
Match: A0A7N0T8H1_KALFE (DSBA domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0T8H1_KALFE)

HSP 1 Score: 144 bits (363), Expect = 1.380e-35
Identity = 91/216 (42.13%), Postives = 129/216 (59.72%), Query Frame = 1
Query:   79 VKIFSDNVCPWCYVGKKNLEAAIKQYTAQKSPSGTPPVYDIRWKPFFLNIESPETSEERIVEHLEKKYGIGAGSRMAASLHRAGQV---VGIQFNNDRKVHNTIRSHRLVRLADSQ--QKGNQMIEELFHGYFEEGKNIADVGVLLDLADKAGVEVTREFL-EGSEGKQEVISEYEKGIRSHGISGVPYFVISREGSSATVPLSGGQPPAAFIEAF 708
            + + SD VCPWC+VGKKNLE AI ++T  +        +++RW PFFLN ++P+   E+      K Y    GSR    ++R  ++   +G+++N      NT+ SHRL+  A +Q  +K N++++ELF GYF +GK I D   L+D A+KAGVE   EFL + + G Q+V  E  K   S  ISGVPYFVI+ +     V +SGGQPP  FI AF
Sbjct:   49 IDVSSDTVCPWCFVGKKNLEKAI-EFTKDQYD------FEVRWHPFFLNPDAPKEGIEK-----RKFYEDKFGSRSQQIVNRMYEIFKGIGLEYNMSGLTGNTLDSHRLISFAGNQGLEKQNKLVDELFLGYFTQGKYIGDRNFLVDAANKAGVEGAAEFLADPNSGLQQVQDELRK--YSSDISGVPYFVINEK-----VRISGGQPPENFIRAF 245          
BLAST of mRNA_P-fluviatile_contig8.14610.1 vs. uniprot
Match: A0A5P1EN28_ASPOF (Uncharacterized protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1EN28_ASPOF)

HSP 1 Score: 149 bits (376), Expect = 3.790e-35
Identity = 98/226 (43.36%), Postives = 132/226 (58.41%), Query Frame = 1
Query:   58 TTMTKFVVKI--FSDNVCPWCYVGKKNLEAAIKQYTAQKSPSGTPPVYDIRWKPFFLNIESPETSEERIVEHLEKKYGIGAGSRMAASLHRAGQVVGIQFNNDRKVHNTIRSHRLVRLADSQ--QKGNQMIEELFHGYFEEGKNIADVGVLLDLADKAGVEVTREFLEG-SEGKQEVISEYEKGIRSHGISGVPYFVISREGSSATVPLSGGQPPAAFIEAFEALS 720
            T MTK  V+I   SD VCPWC+VGKKNLE AI     Q         +++RW PFFL   +P+   +++ E   KK+G G   RMA  +    + +G +++      +T+ SHRL+  A  Q   K N +++ELF  YF +GK I D  VLLD A+KAGVE   EFLE  + G +EV  E+EK   S  ISGVPYFVI+ +       LSGGQPP  F+ AF+A++
Sbjct:  280 TPMTKKHVQIDISSDTVCPWCFVGKKNLEKAIDISKDQFD-------FEVRWHPFFLEPSAPKEGIKKL-EFYYKKFGAGQFDRMALRMTEIFRSLGFEYDTSGLTGSTLDSHRLITFAAKQGYDKQNALVDELFLNYFCQGKYIGDRQVLLDAAEKAGVEGAAEFLEDPNRGLKEVNEEFEK--YSSRISGVPYFVINGKHG-----LSGGQPPEVFLRAFQAVA 490          
BLAST of mRNA_P-fluviatile_contig8.14610.1 vs. uniprot
Match: A0A0K2G672_NITMO (Putative thiol oxidoreductase, DsbA family, FrnE subfamily n=1 Tax=Nitrospira moscoviensis TaxID=42253 RepID=A0A0K2G672_NITMO)

HSP 1 Score: 140 bits (353), Expect = 1.500e-34
Identity = 88/224 (39.29%), Postives = 124/224 (55.36%), Query Frame = 1
Query:   61 TMTKFVVKIFSDNVCPWCYVGKKNLEAAIKQYTAQKSPSGTPPVYDIRWKPFFLNIESPETSEERIVEHLEKKYG-IGAGSRMAASLHRAGQVVGIQF--NNDRKVHNTIRSHRLVRLADSQQKGNQMIEELFHGYFEEGKNIADVGVLLDLADKAGVEVTREFLEGSEGKQEVISEYEKGIRSHGISGVPYFVISREGSSATVPLSGGQPPAAFIEAFEALSG 723
            T ++  ++++SD VCPWCYVGK+ LE A+ Q        G      I W+PF LN   P    +R   +LE K+G + A  R+ A +  AG+  GI F   N R+  NT  +HRL+  A +Q + + ++E LF GYFEEG ++    VL  LA++AG+E    FL+G  G +EV +E  +G+R  GI GVPYFV+S         LSG QP   F+ A     G
Sbjct:    2 TDSRLTIEVYSDVVCPWCYVGKRRLERALSQL-------GDAAQARIAWRPFELNPTLPREGMDRRA-YLEAKFGSLAAFQRLEAQVLAAGEAEGIAFAFENIRRTPNTFLAHRLIWYAATQHRQDAVVEALFRGYFEEGDDVGSPSVLTQLAERAGLEAAA-FLDGDGGTEEVRTEEAEGLRL-GIRGVPYFVLS-----GAYGLSGAQPVEVFLSAIRQAQG 210          
BLAST of mRNA_P-fluviatile_contig8.14610.1 vs. uniprot
Match: G2R7R5_THETT (DSBA domain-containing protein n=2 Tax=Thermothielavioides terrestris TaxID=2587410 RepID=G2R7R5_THETT)

HSP 1 Score: 140 bits (353), Expect = 2.030e-34
Identity = 85/219 (38.81%), Postives = 126/219 (57.53%), Query Frame = 1
Query:   64 MTKFVVKIFSDNVCPWCYVGKKNLEAAIKQYTAQKSPSGTPPVYDIRWKPFFLNIESPETSEERIVEHLEKKYGIGAGSRMAASLHRAGQVVGIQFNNDRKVHNTIRSHRLVRLADSQ--QKGNQMIEELFHGYFEEGKNIADVGVLLDLADKAGVEVTR--EFLEGSEGKQEVISEYEKGIRSHGISGVPYFVISREGSSATVPLSGGQPPAAFIEAF 708
            MT F +KI SD +CPWCYVGKK LE AI+ Y  +  P G    + I W PF+L+   P+   +R   HL +K+G    +   A L R G+  GI+F+   KV NT  +HRLV+LA ++  +  N+++  +F  +FEE  +I     L+++ +KAG++ T   ++L+  +G QEV  E E+  R  GI GVP F I+ +       +SG Q P  F+EAF
Sbjct:    1 MTNFNIKIVSDAICPWCYVGKKRLERAIEMYK-RDVPGGASDTFTISWHPFYLDPTLPKVGVDRNT-HLARKFGPERAALATAHLKRLGEAEGIRFSFQGKVGNTRDAHRLVQLAKTKSGETENRLVSTMFKSHFEEDADITSRDALVEIGEKAGMDRTEVTDWLDQGKGGQEVDREVEEAYR-RGIHGVPNFTINGQ-----YEVSGAQDPEVFLEAF 211          
BLAST of mRNA_P-fluviatile_contig8.14610.1 vs. uniprot
Match: A0A2T7C3Y8_9POAL (DSBA domain-containing protein n=5 Tax=Panicum TaxID=4539 RepID=A0A2T7C3Y8_9POAL)

HSP 1 Score: 139 bits (350), Expect = 3.610e-34
Identity = 86/214 (40.19%), Postives = 124/214 (57.94%), Query Frame = 1
Query:   79 VKIFSDNVCPWCYVGKKNLEAAIKQYTAQKSPSGTPPVYDIRWKPFFLNIESPETSEERIVEHLEKKYGIGAGSRMAASLHRAGQVVGIQFNNDRKVHNTIRSHRLVRLADSQ--QKGNQMIEELFHGYFEEGKNIADVGVLLDLADKAGVEVTREFLEG-SEGKQEVISEYEKGIRSHGISGVPYFVISREGSSATVPLSGGQPPAAFIEAFE 711
            + + SD VCPWC+VGKKNLE A++Q   + +       +++RW PFFLN ++P+    +  +  + K+G     R  + +    + +G++++      NT+ SHRL+ LA+ Q   K N ++EELF  YF +GK I D  VLLD+A K G+E   E LE  S G  EV  E  K   S  ISGVP+FVI+ +       LSGGQPP+ F+ AFE
Sbjct:   12 IDVSSDTVCPWCFVGKKNLERAMEQTKDKYN-------FEVRWHPFFLNPDAPKEGIRKS-DFYQMKFGPVQFERATSRMTEIFRGLGLEYDMSGLTGNTMDSHRLITLAEHQGYDKQNALVEELFQSYFCQGKYIGDKQVLLDVARKVGIEGAEELLEDPSRGVDEVQEELNK--YSSAISGVPHFVINGK-----YQLSGGQPPSVFMRAFE 210          
BLAST of mRNA_P-fluviatile_contig8.14610.1 vs. uniprot
Match: C5WT92_SORBI (DSBA domain-containing protein n=7 Tax=Andropogoneae TaxID=147429 RepID=C5WT92_SORBI)

HSP 1 Score: 140 bits (352), Expect = 3.670e-34
Identity = 92/234 (39.32%), Postives = 130/234 (55.56%), Query Frame = 1
Query:   22 LGSSSRQRIDQSTTMTKFV-VKIFSDNVCPWCYVGKKNLEAAIKQYTAQKSPSGTPPVYDIRWKPFFLNIESPETSEERIVEHLEKKYGIGAGSRMAASLHRAGQVVGIQFNNDRKVHNTIRSHRLVRLADSQ--QKGNQMIEELFHGYFEEGKNIADVGVLLDLADKAGVEVTREFLEG-SEGKQEVISEYEKGIRSHGISGVPYFVISREGSSATVPLSGGQPPAAFIEAFE 711
            LG+    +   S T  K + + + SD VCPWC+VGKKNLE A++Q   +         +++RW PFFLN ++P+    +  +    K+G     R  + +    + +G++++      NT+ SHRL+ LA  Q   K N ++EELF  YF +GK I D  VLLD A K G+E   E LE  S+G  EV  E +K   S GISGVP+FVI+ +       LSGGQPP  F+ AFE
Sbjct:   16 LGAPRCAKFMASDTGKKLIQIDVSSDTVCPWCFVGKKNLEKAMEQSKDKFD-------FEVRWHPFFLNPDAPKEGVRK-TDFFRAKFGPVQYERAISRMTEIFRGLGLEYDMSGLTGNTMDSHRLITLAGHQGYDKQNALVEELFLNYFCQGKYIGDKQVLLDAARKVGIEGAEELLEDPSKGVDEVQEELKK--YSSGISGVPHFVINNK-----YQLSGGQPPNVFMRAFE 234          
BLAST of mRNA_P-fluviatile_contig8.14610.1 vs. uniprot
Match: A0A2I0X9A3_9ASPA (DSBA domain-containing protein n=2 Tax=Epidendroideae TaxID=158332 RepID=A0A2I0X9A3_9ASPA)

HSP 1 Score: 139 bits (350), Expect = 3.710e-34
Identity = 87/225 (38.67%), Postives = 129/225 (57.33%), Query Frame = 1
Query:   58 TTMTKFV-VKIFSDNVCPWCYVGKKNLEAAIKQYTAQKSPSGTPPVYDIRWKPFFLNIESPETSEERIVEHLEKKYGIGAGSRMAASLHRAGQVVGIQFNNDRKVHNTIRSHRLVRLADSQ--QKGNQMIEELFHGYFEEGKNIADVGVLLDLADKAGVEVTREFL-EGSEGKQEVISEYEKGIRSHGISGVPYFVISREGSSATVPLSGGQPPAAFIEAFEALS 720
            +T  KF+ + + SD VCPWC+VGKKNLE A+     Q +       ++++W PFFLN  +P+    +  E  + K+G      + + +    + +G +++      NT+ SHRL+  A +Q  +K N ++EELF  YF +GK I D  VLLD A K G+E   E + + ++G +EV  E EK   S  ISGVPYFV +      +  LSGGQPP AF+ AF+A+S
Sbjct:    8 STSKKFIQIDVSSDTVCPWCFVGKKNLEKAMSLAKDQFN-------FEVKWHPFFLNPNAPKEGILKS-EFYKNKFGSTQYEHIISRMREVFRGLGFEYDTAGMTGNTLDSHRLISFAANQGYEKQNALVEELFQNYFIQGKFIGDKQVLLDAAQKVGIEGAAELINDPNKGLKEVNEELEK--YSSRISGVPYFVFN-----GSFQLSGGQPPEAFLHAFQAVS 217          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYU3_9PHAE1.160e-11073.52DSBA domain-containing protein n=2 Tax=Ectocarpus ... [more]
B7ZGN0_9PHAE5.420e-10670.91DSBA oxidoreductase n=1 Tax=Laminaria digitata Tax... [more]
A0A835YGU7_9STRA5.770e-4747.14Protein disulfide isomerase n=1 Tax=Tribonema minu... [more]
A0A7N0T8H1_KALFE1.380e-3542.13DSBA domain-containing protein n=2 Tax=Kalanchoe f... [more]
A0A5P1EN28_ASPOF3.790e-3543.36Uncharacterized protein n=2 Tax=Asparagus officina... [more]
A0A0K2G672_NITMO1.500e-3439.29Putative thiol oxidoreductase, DsbA family, FrnE s... [more]
G2R7R5_THETT2.030e-3438.81DSBA domain-containing protein n=2 Tax=Thermothiel... [more]
A0A2T7C3Y8_9POAL3.610e-3440.19DSBA domain-containing protein n=5 Tax=Panicum Tax... [more]
C5WT92_SORBI3.670e-3439.32DSBA domain-containing protein n=7 Tax=Andropogone... [more]
A0A2I0X9A3_9ASPA3.710e-3438.67DSBA domain-containing protein n=2 Tax=Epidendroid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3159846..3163621 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score339.7
Seed ortholog evalue1e-90
Seed eggNOG ortholog2880.D8LHI5
EggNOG free text desc.DSBA-like thioredoxin domain
EggNOG OGs2QTH7@2759,COG2761@1
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein disulfide isomerase
Ec32 orthologEc-11_003940.1
Exons4
Model size1876
Cds size663
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14610.1prot_P-fluviatile_contig8.14610.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 3159909..3162471 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817255.9060934-UTR-P-fluviatile_contig8:3159845..31599081622817255.9060934-UTR-P-fluviatile_contig8:3159845..3159908Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3159846..3159908 +
1693571755.1281059-UTR-P-fluviatile_contig8:3159845..31599081693571755.1281059-UTR-P-fluviatile_contig8:3159845..3159908Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3159846..3159908 +
1622817255.967667-UTR-P-fluviatile_contig8:3162471..31636211622817255.967667-UTR-P-fluviatile_contig8:3162471..3163621Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3162472..3163621 +
1693571755.6208491-UTR-P-fluviatile_contig8:3162471..31636211693571755.6208491-UTR-P-fluviatile_contig8:3162471..3163621Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3162472..3163621 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817255.917081-CDS-P-fluviatile_contig8:3159908..31599291622817255.917081-CDS-P-fluviatile_contig8:3159908..3159929Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3159909..3159929 +
1693571755.1437151-CDS-P-fluviatile_contig8:3159908..31599291693571755.1437151-CDS-P-fluviatile_contig8:3159908..3159929Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3159909..3159929 +
1622817255.9270017-CDS-P-fluviatile_contig8:3160599..31607761622817255.9270017-CDS-P-fluviatile_contig8:3160599..3160776Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3160600..3160776 +
1693571755.5710328-CDS-P-fluviatile_contig8:3160599..31607761693571755.5710328-CDS-P-fluviatile_contig8:3160599..3160776Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3160600..3160776 +
1622817255.940955-CDS-P-fluviatile_contig8:3161543..31617981622817255.940955-CDS-P-fluviatile_contig8:3161543..3161798Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3161544..3161798 +
1693571755.592629-CDS-P-fluviatile_contig8:3161543..31617981693571755.592629-CDS-P-fluviatile_contig8:3161543..3161798Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3161544..3161798 +
1622817255.9564564-CDS-P-fluviatile_contig8:3162261..31624711622817255.9564564-CDS-P-fluviatile_contig8:3162261..3162471Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3162262..3162471 +
1693571755.6088393-CDS-P-fluviatile_contig8:3162261..31624711693571755.6088393-CDS-P-fluviatile_contig8:3162261..3162471Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3162262..3162471 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14610.1

>prot_P-fluviatile_contig8.14610.1 ID=prot_P-fluviatile_contig8.14610.1|Name=mRNA_P-fluviatile_contig8.14610.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=221bp
MTKFVVKIFSDNVCPWCYVGKKNLEAAIKQYTAQKSPSGTPPVYDIRWKP
FFLNIESPETSEERIVEHLEKKYGIGAGSRMAASLHRAGQVVGIQFNNDR
KVHNTIRSHRLVRLADSQQKGNQMIEELFHGYFEEGKNIADVGVLLDLAD
KAGVEVTREFLEGSEGKQEVISEYEKGIRSHGISGVPYFVISREGSSATV
PLSGGQPPAAFIEAFEALSG*
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mRNA from alignment at P-fluviatile_contig8:3159846..3163621+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14610.1 ID=mRNA_P-fluviatile_contig8.14610.1|Name=mRNA_P-fluviatile_contig8.14610.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3776bp|location=Sequence derived from alignment at P-fluviatile_contig8:3159846..3163621+ (Porterinema fluviatile SAG_2381)
GACAAACTGCAACAGATTTTACTTGGATCATCCTCCCGGCAGCGCATTGA CCAAAGCACAACAATGACCAAGTTCGTTGTTAAGGTGGGGCTCCTCGGTC TTGTTTCTTCTTGCATTTGTCTGCACGGCGGTAGAGAATCTCATCCTCAA TGACCACCCAACGCCCCCGTAGCTGCAAGGATACGCTTGTCCCTCCCATC GTTTGATTCCTTCAGCACATGAAAAGCTAGAGGCGCAAGTGAACGTTCTC AAGCTTACCTCCGCATCCATAAACGAGGTCGCATCGCTGTTATTTCCAAT CTTCGCTGTCGGAAACATACTTGCCCGTGTGTTGTGTGAACGTCTTGTCC CCATCGCGCGCACACACAAGCTGCTCATCCAGATCTCTTCCACACGAGGT TTGTCCGTGATGTCAAACGTTGCCCTGCTGACAATCATCCCATCCCTCTC ATCCACATCCTCCTCCTTGGATTGCCTTGGTTTGCAAAAAGCCTTCAAGT TGCCGAAAGACCGTCCCATCCCATTTTCTTCTAGATCAGATCTCATCAGA TAAATGTTTGCCCGTGATGAAAATCCCATTTCGTCCGTTGCCCCACAACG CCCTTGCACTACGCTCGTTCAGATTAACTCAGATTACAGTTGCCCGCTAT CGAAAGCCTTCTGTCCCACGAAAACGCCGACGTAGAGGTCTTCTCACATA GTGTTTTACCAGTGGTGTCGAAACGTGCCGTCGCACACACCTTCTCTTCT CCAGATCTTCTCGGACAACGTTTGCCCGTGGTGTTACGTGGGGAAGAAGA ACCTCGAAGCCGCTATAAAGCAATACACCGCACAGAAGTCGCCCTCGGGA ACTCCCCCCGTGTACGACATCCGCTGGAAGCCGTTCTTCCTCAATATCGA GTCGCCGGAAACCTCCGAGGAGCGTATTGTGGTGAGTAGAAATGGGGGTC TGCATTTCCTTGTTTCAGAGCTACACATGCAGAACGGGCCTTAAGAACAT ACCACGTCAGATCATGAGTCTCAAAATACAAGCAGCTCATTGTTGGTGCC TGGAGAAGAACCTCCACACTGAATCCCTTATACTCCGTATAAGCTATTGA CAGCCCACGGAAGGAATAATAACCCGAGCCTGGCAGGCAAAAGGAGGTTC CGAAGTGCGGGCCCCATCTGCACCGCGCACTCCCGTCACGGATCGTGGCC CGCTACGAATTCGCTATCGGACAAGGATATTGAGTAGTGGAATTGTCGAC GCGGTTGAGTATCATTTGTTTCGGCAGCAGTGATCCTGTCTCTGTTGTCA GCCACACGCGTTCGTTGATGGCGGCTGCGTGAACTTCCCTTCACGCTTGC AAAGAATGCCAACTGAGTCTCAGGAGTACAGAGAAATTCAGCACCCTTGC GACCGGTGGGTAAACAAGACCGTTTTGCACGCACTGGTTCTCGAGAGAAT TTCGGACCTCACTTATATCTGATCCGAAAACCGGGATGTTTTACAAGCTC GAACTCCATGTTTCCTTCGTGAGACTCGCCGGCGGTGCAGGTCAACATGC GGGCATGCCGGAAGCGTATCGATTATTATCAATCTGCGGGGTCAGCCTGG ACACGCCGCTTGAAAGACATGGATTGATGAACAGGATGCTCATTGTACTA GTGCATCGTGTCGTGCATTCTGCCCTCCTTGCCCCCCCCCCTCCCCAGGA GCACCTGGAGAAAAAGTACGGCATAGGGGCCGGATCTCGGATGGCAGCGT CCCTGCACAGAGCGGGACAGGTCGTAGGTATCCAATTCAACAACGACCGG AAGGTGCACAACACCATCCGGTCCCACCGCCTGGTTCGCCTCGCAGATTC GCAGCAGAAGGGGAACCAAATGATCGAGGAGCTCTTCCACGGGTACTTTG AAGAGGGCAAGAATATCGCAGACGTCGGTGTTCTGCTCGACTTGGCCGAC AAGGTGTGCGTGTGCATTTTTTTTTCTCTTTAAGCTCGTCGAGTCTAGAA CGTCCTGCGCTTGAGTGCCTTGAAAAGCGAGAACGAGAGCAACACCGTTC CTCCTAAAGAAAGAGCTGTCCTCCCGAGGGGGTGGAGCTTTTTGTGTGCG ATAGCGAGTTTGTGTTTTGTTTGGGTGCGCGATTTGGTACGATGGAGTCT CAAAGTTGCTGAAGGAAGGCTTACCCCCGCCCGCGTTGCTCGTAAGTGTG TCTGAGATCGCCTCCGTCTCTTTCACCGAACACGCCAATAGTGGCGTCAT TGTGCGGCAACCACCCGATTACACAAAAAATGAAGTCGATACCCTTGTCG CCACTGTTAATGCCACACTCTCACTTTTTGTGGAAAGATCGCTCACTTCT TTGGCACCGTTGTTTATCCAACTGCCGATTAACCAGATCGTTTTTGTTTT CTTTTCTTGCTGTTAGGCCGGGGTCGAGGTCACAAGAGAGTTCCTCGAAG GAAGCGAGGGAAAGCAGGAAGTGATCAGCGAGTACGAGAAGGGTATCCGG TCTCACGGCATCTCGGGGGTGCCGTACTTCGTCATCTCGCGCGAGGGCAG TAGCGCCACCGTCCCGTTGTCCGGCGGGCAGCCGCCAGCGGCCTTCATCG AGGCATTCGAGGCCCTGTCTGGTTGAGTTGACGACGCTCACTGTTTCCGG CGATTTGTTGCCGTCCTCTCATCAAGTTCGTGGAAGAGTACTGGCCGGCT CTCAGTCTCGAGACCGTTTCGACAGGGTGAGGGGTGAGCAACGGCCCGGG AGGGAATTGGGTAGGGGTCGCGAGCAGGAGTGGGGGTACGGGGCGTCAGA AGTCGAGATCGGGGTCAACGACTGATCCTGTTGAACGGGTCACGTGTTGA AGGGTCGAATCGAGGGTCGAAGCAATTAAAATGTGGATATCAAGGTGATT ATTTCGGGATGTTGAGATTAACTGCGGCCGTTTGCAAGTTGGAGGCGAGA ATATTCATTTCAAGAATGCGTGTATGTTGCACGGGGTACATGTGTGGACA CCAGCACACGATATCGTCAAAGTTATGCCGAGACATGTTGCAGACGCGGT GAAGGTATTATCATGTATATTTCCCTGTGGCCAGGGCCCGTTTGAGGATG TAGAAAGAGTGAAGAGTAGCGCACGAGGACGGGGTATTCATTTCGCAGAC GGTGTCTGCGTACCGTGACCGATGATGCGTGAGATTTTGGAGTCATTTGC GAGGTGGGTCTATCTAGCAAAATGAGGCACGTCAGAGCAGCATGTTCCAC TATACAGTAGTTGGTCATCGCCACCTACTCATTCTCTCGATACTTGTTTG CAGCCGCACCGATTGAAGGGTGGCGGGGGAGTATCGAAAGGGAGACTGTG ACTGCCGGGGAATGTTAGATCGTCGCGGACAGGGGAAGCGCCGCGGGCAA GTGGAGAGAAAGCATGTTCCAACGACACCGATTTGGAGGCAGCCCCGTTA ACTCTCCGTGCCCCCCACGCCCGCCCCGGCGAGAAACGAAACACCATCGT CGTCGTCGTCGCCAACAAAAGAAAGTCATTAGGATTGGAAGTGGCCCTGT GTGGCTACACAGGACAATCTATGGAAAGAAAGCACAAATGGTCCACCTAC CATTGCAGAAAATGCGGTGTCTTCGTTGTTGGCATCGGGCCGCGAGAGAT CGTAAGCCGCCTGAGCGCCGAAAGTTAACGACGGCTACACTGGCGTGGTT TTCGCACGATGAGGACTAAGAAATATTGATCGGGAACAAGTATGTGGGTA GAATTCGCCCTCTTAACAACAAGCAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:3159846..3163621+

>mRNA_P-fluviatile_contig8.14610.1 ID=mRNA_P-fluviatile_contig8.14610.1|Name=mRNA_P-fluviatile_contig8.14610.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1326bp|location=Sequence derived from alignment at P-fluviatile_contig8:3159846..3163621+ (Porterinema fluviatile SAG_2381)
ATGACCAAGTTCGTTGTTAAGATGACCAAGTTCGTTGTTAAGATCTTCTC
GGACAACGTTTGCCCGTGGTGTTACGTGGGGAAGAAGAACCTCGAAGCCG
CTATAAAGCAATACACCGCACAGAAGTCGCCCTCGGGAACTCCCCCCGTG
TACGACATCCGCTGGAAGCCGTTCTTCCTCAATATCGAGTCGCCGGAAAC
CTCCGAGGAGCGTATTGTGATCTTCTCGGACAACGTTTGCCCGTGGTGTT
ACGTGGGGAAGAAGAACCTCGAAGCCGCTATAAAGCAATACACCGCACAG
AAGTCGCCCTCGGGAACTCCCCCCGTGTACGACATCCGCTGGAAGCCGTT
CTTCCTCAATATCGAGTCGCCGGAAACCTCCGAGGAGCGTATTGTGGAGC
ACCTGGAGAAAAAGTACGGCATAGGGGCCGGATCTCGGATGGCAGCGTCC
CTGCACAGAGCGGGACAGGTCGTAGGTATCCAATTCAACAACGACCGGAA
GGTGCACAACACCATCCGGTCCCACCGCCTGGTTCGCCTCGCAGATTCGC
AGCAGAAGGGGAACCAAATGATCGAGGAGCTCTTCCACGGGTACTTTGAA
GAGGGCAAGAATATCGCAGACGTCGGTGTTCTGCTCGACTTGGCCGACAA
GGAGCACCTGGAGAAAAAGTACGGCATAGGGGCCGGATCTCGGATGGCAG
CGTCCCTGCACAGAGCGGGACAGGTCGTAGGTATCCAATTCAACAACGAC
CGGAAGGTGCACAACACCATCCGGTCCCACCGCCTGGTTCGCCTCGCAGA
TTCGCAGCAGAAGGGGAACCAAATGATCGAGGAGCTCTTCCACGGGTACT
TTGAAGAGGGCAAGAATATCGCAGACGTCGGTGTTCTGCTCGACTTGGCC
GACAAGGCCGGGGTCGAGGTCACAAGAGAGTTCCTCGAAGGAAGCGAGGG
AAAGCAGGAAGTGATCAGCGAGTACGAGAAGGGTATCCGGTCTCACGGCA
TCTCGGGGGTGCCGTACTTCGTCATCTCGCGCGAGGGCAGTAGCGCCACC
GTCCCGTTGTCCGGCGGGCAGCCGCCAGCGGCCTTCATCGAGGCATTCGA
GGCCCTGTCTGGTTGAGCCGGGGTCGAGGTCACAAGAGAGTTCCTCGAAG
GAAGCGAGGGAAAGCAGGAAGTGATCAGCGAGTACGAGAAGGGTATCCGG
TCTCACGGCATCTCGGGGGTGCCGTACTTCGTCATCTCGCGCGAGGGCAG
TAGCGCCACCGTCCCGTTGTCCGGCGGGCAGCCGCCAGCGGCCTTCATCG
AGGCATTCGAGGCCCTGTCTGGTTGA
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