mRNA_P-fluviatile_contig8.14564.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14564.1
Unique NamemRNA_P-fluviatile_contig8.14564.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig8.14564.1 vs. uniprot
Match: D8LIM5_ECTSI (Radial spoke protein 7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIM5_ECTSI)

HSP 1 Score: 1167 bits (3019), Expect = 0.000e+0
Identity = 732/1144 (63.99%), Postives = 832/1144 (72.73%), Query Frame = 2
Query:   59 MAASVCSLGPPSVGPGNSAPTIGFAVSARPCSRHP-NKEPLSGNTLCHKINVERKQAIHEKRLATVKPSLSLSTPRRMEFMDKRLSKNFHTRRHHEQVVHENLKLLRALEEIHSRSNTNAAAGALSSAXXXXXXXXXXXXXXXGRGGVITAPAGLKRRKGQQPGSAVNSRQSSSR-KKLSSLLARQRNVKAALVARENQKMIERMTRSKSLYSRETMRQHRIRHKRVLRLRKTDYTAGHLLAAATAKRHWGGGNACDEGFSYSFEGEEHSRRRNPERSRAPGKHSHGSRDTSCPTGAASSCSSSAARGTSHSPPRSLNSRSIFIGGGGVKIGGQGSRSAPRLPSLLHDDDMYGGGSILESPSLEQCLLATA----------ECDGGWDGGNXXXXXXXXXSRTHDSGNHHKDDGSRLRNPTDVGVGSRGGSLQHRKPSSRQRGGKD-ASSSVDSTGGMRGTEASVDSLFQSSGSV-----PTSGGHR----GSQQHKEEGGGRDERSTGSLAND-MMVRDADLDRIFNPLAFMDETQGVRVLIQATKPLEVRSHVGETWICFIRILVKDPFDGQLDIRVIHDREEVCRRLLSLEEANAICEHAQMLL---GGKTVRDWPFPFAPLPPLLPGAPS-NVPAGGHATVDSTSTAAEPLSESLRAAADSAAAADTGAAAVKKVGGGAS--------------------PGLRPRSSVMALEQFATSDGNLSDLLSTLFNEADTEKKGFLTPEQLTSIMKTAELGLTGPELHLVIAEADDNADGNIDYYEFIPLAYNLVNAFRARRRACEQMDEANLDLDQQAIHELYDAEFDRLVRQLKAICKAQDANGTGVLPRAEFKQCISADRCFGGLTKLEAKLLLNLLPKDSHGNVIYRKIGAGLEQVRFTTLRNTMAEARASDTQKYLMSLCREEEAKCDPLGGKGQAKADGDTMAVGSKQCSGMLRARQLTKLLLSAPLLSLSRLHVTALMSQAHIVDGMVNYVDLVPIIAKTIEGMFHPRSLKMRHDIFKSRGSGGTGXXXXXXXXXXXXXXGSQPQATATVLGKSRDDVQRIFVDVLREDNQGAGIEQLKDPATFARCMASLGLNLEPDTISALWVAADLDSREGATFVDVVDFCFNCVLFMEREKEVK 3349
            MAAS+ SLGPP  GPG++AP IGF V+A    R   NKEPLSGNTLCHK NVERKQAIHE RLA+VK SLSLSTP RMEFMDKRLSKNFH RRHHE VV +N K+LRALEEIHSRS+T AA GA + A                R G  +AP   K+ K     SA N+ +SSS  KKL+SLLAR+RNVKAALVARENQKM+ER+TRSKSLYS+E M QHR+ HKR+LRLRKTDYTAGHLLAAATA RHW GG++ DE      EG    RRRN    R P + S GS++ +  T    S     ARGTS+SP R  +SRS+  G GG  +G +G++SAPRLPSLL  +D+YGGGSIL SP+LEQCL A                      XXXXXXXXX     SGNH  DDGSR R  TD GVGSR GS  HRK S RQRGGKD A     STGGMRGT+AS+D+LF  S S+      +SGG R    G+Q+ +  GG R ++S+GSLA+      D +LD+I+NPLAF+DETQGVRVLIQATKPLEV SH GETWICFIRI+V+DPFD QLD+R+IHDREE+C+RLLSLEEANAICEHAQ      GG T  D P  FAP       AP  ++P  G A                                                             P  RP +    L++++  DGNLS+LLS LF EAD E+KGFLTPEQLTSIM+ AELGLTGPELHLVIAEADDNADG IDYYEFIPLAYNLV+AFRARRRACE+MDEANLDLDQQAIH LYDAEFDRLVRQLK +CK+ D NGTGVLPRAEFKQCISADRC GGLTK+E+KLLLNLLPKDSHGNV+YRK+GAGLEQVRFTTLRNT+AEA ASDTQKYLM+LCREEEAK DPLG KG  K++GD +A+G K  SG+LRARQLTKLLL+APLLSLSRLHVTALMSQA+I+DGMVNY++LVP+IAKTIEGMFHP SLKMRH+IF +   G   XXXXXXXXXXXXXX      TATV GKSRDD+QR  V++LRED QGA IE+L+DPATFARCMASLGL+LEPDTI+ALWVAADLD+REG TFVDVVDFCFNCVLFMEREKE +
Sbjct:    1 MAASLSSLGPPHAGPGSTAPNIGFTVAATHNRRGVINKEPLSGNTLCHKNNVERKQAIHENRLASVKASLSLSTPLRMEFMDKRLSKNFHARRHHELVVLQNRKILRALEEIHSRSSTVAAVGATNPAAEGGSMVVPASSDGE-RLGSSSAPVSWKKSKDLPSASATNAGESSSSGKKLNSLLARRRNVKAALVARENQKMMERITRSKSLYSKEKMHQHRVCHKRILRLRKTDYTAGHLLAAATASRHWRGGDSRDE------EGRHRHRRRNRHSQRNP-RVSGGSKEYANAT----SAPPPVARGTSYSPTRGKHSRSVHRGDGGG-LGDRGTKSAPRLPSLLDVEDIYGGGSILGSPNLEQCLQAAKMSARSGXXXXXXXXXXXXXXXXXXXXXXXXXXAGSGNH-DDDGSRPRPFTDGGVGSRVGSRHHRK-SFRQRGGKDTAGVGGSSTGGMRGTDASLDALFHHSESLGSSVEDSSGGVRRGRYGNQRGRGGGGSRGDKSSGSLASSGKSADDTELDKIYNPLAFLDETQGVRVLIQATKPLEVSSHPGETWICFIRIMVQDPFDDQLDVRIIHDREEICQRLLSLEEANAICEHAQATSSGGGGMTPGDRPSLFAPR--AAAAAPKRSLPLPGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQTRPSA---GLKRYSARDGNLSELLSALFKEADVEEKGFLTPEQLTSIMQNAELGLTGPELHLVIAEADDNADGTIDYYEFIPLAYNLVDAFRARRRACEEMDEANLDLDQQAIHALYDAEFDRLVRQLKTLCKSHDPNGTGVLPRAEFKQCISADRC-GGLTKIESKLLLNLLPKDSHGNVVYRKLGAGLEQVRFTTLRNTVAEASASDTQKYLMALCREEEAKSDPLGNKGHMKSNGDAVAIGGKHYSGVLRARQLTKLLLNAPLLSLSRLHVTALMSQANILDGMVNYIELVPMIAKTIEGMFHPWSLKMRHEIFNNN-RGPXXXXXXXXXXXXXXXXXXXXXGTATVRGKSRDDIQRKIVEILREDKQGAAIERLRDPATFARCMASLGLDLEPDTINALWVAADLDTREGTTFVDVVDFCFNCVLFMEREKEAR 1122          
BLAST of mRNA_P-fluviatile_contig8.14564.1 vs. uniprot
Match: A0A6H5K287_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K287_9PHAE)

HSP 1 Score: 976 bits (2524), Expect = 0.000e+0
Identity = 669/1207 (55.43%), Postives = 767/1207 (63.55%), Query Frame = 2
Query:   59 MAASVCSLGPPSVGPGNSAPTIGFAVSARPCSRHP-NKEPLSGNTLCHKINVERKQAIHEKRLATVKPSLSLSTPRRMEFMDKRLSKNFHTRRHHEQVVHENLKLLRALEEIHSRSNTNAAAGALSSAXXXXXXXXXXXXXXXGRGGVITAPAGLKRRKGQQPGSAVNSRQSS-SRKKLSSLLARQRNVKAALVARENQKMIERMTRSKSLYSRETMRQHRIRHKRVLRLRKTDYTAGHLLAAATAKRHWGGGNACDEGFSYSFEGEEHSRRRNPERSRAPGKHSHGSRD----TSCPTGAASSCSSSAARGTSHSPPRSLNSRSIF-IGGGGVKIGGQGSRSAPRLPSLLHDDDMYGGGSILESPSLEQCLLATAECDG----------GWDGGNXXXXXXXXXSRTHDSGNHHKDDGSRLRNPTDVGVGSRGGSLQHRKPSSRQRGGKD-ASSSVDSTGGMRGTEASVDSLFQSSGSVPTS-----GGHR----GSQQHKEEGGGRDERSTGSLAND-MMVRDADLDRIFNPLAFMDETQGVRVLIQATKPLEV----------------------------------------------------RSHVGETWICFIRILVKDPFDGQLDIRVIHDREEVCRRLLSLEEANAICEHAQMLL---GGKTVRDWPFPFAP----------LPPLLPGAPSNVPAGGHATVDSTSTAAEPLSESLRAAADSAAAADTGAAAVKKVGGGASPGLRPRSSVMALEQFATSDGNLSDLLSTLFNEADTEKKGFLTPEQLTSIMKTAELGLTGPELHLVIAEADDNADGNIDYYEFIPLAYNLVNAFRARRRACEQMDEANLDLDQQ---------------------------------------------------------------------------------------AIHELYDAEFDRLVRQLKAICKAQDANGTGVLPRAEFKQCISADRCFGGLTKLEAKLLLNLLPKDSHGNVIYRKIGAGLEQVRFTTLRNTMAEARASDTQKYLMSLCREEEAKCDPLGGKGQAKADGDTMAVGSKQCSGMLRARQLTKLLLSAPLLSLSRLHVTALMSQAHIVDGMVNYVDLVPIIAKTIEGMFHPRSLKMRHDIFKSRGSGGTGXXXXXXXXXXXXXXGSQPQATATVLGKSRDDVQRIFVDVLRE 3139
            MAAS+ SLGPP  GPG++AP IGF V+A    R   NKEPLSGNTLCHK NVERKQAIHE RLA+VK SLSLSTPRRMEFMDKRLSKNFH RRHHE VV +N K+LRALEEIHSRS+T AA GA + A                R G  +APA  K+ KG    SA N+ +SS S KKL+SLLAR+RNVKAALVARENQKM+ER+TRSKSLYS+E MRQHR+ HKR+LRLRKTDYTAGHLLAAATA RHW GG++ DE      EG  H  RR    S+   + S GS++    TS P           ARGTS+SP R  +SRS+  + GGG  +GG+G++SAPRLPSLL  +D+YGGGSIL SP+LEQCL A AE                   XXXXXXXX + T  SGNH +DDG R R  TD GVGSRGGS  HRK +SRQRGGKD A     STGG RGT+AS+D+L     S+ +S     GG R    G+Q+ +  GG   ++S+GSLA+      DA+LD+I+NPLAF+DETQGVRVLIQATKPLEV                                                     S  GETWICFIRI+V+DPFD QLD+R+IHDREE+C+RLLSLEEA  ICEHA+      GG    D P  FAP          LP  LPG+                                                      RP      L+Q++ SD NLS+LLS LF +AD E+KGFLTPEQLTSIM+ AELGLTGPELHLVIAEAD+NADG IDYYEFIPLAYNLV+AFRAR RACE+MDEANLDLDQQ                                                                                       AIH LYDAEFDRLVRQLKA+CK+QDANGTGVLPRAEFKQCISADRC GGLTK+E+KLLLNLLPKDSHGNV+YRK+GAGLEQVRFTTLRNT+AEA ASDTQKYLM+LCREEEAK DPLG KG  K++GD +A+G K  SG+LRARQLTKLLL+APLLSLSRLHVTALMSQA+I+DGMVNYV+LVP+IAKTIEGMFHP S+KMRH+IF +       XXXXXXXXXXXXXX      TATV GKSRDD+QR  V++LRE
Sbjct:    1 MAASLSSLGPPHAGPGSTAPNIGFTVAATHNRRGVINKEPLSGNTLCHKNNVERKQAIHENRLASVKASLSLSTPRRMEFMDKRLSKNFHARRHHELVVLQNRKILRALEEIHSRSSTVAAVGATNPAEGGSMVVPASSDGE--RLGSSSAPASWKKSKGLPSASATNAGESSCSSKKLNSLLARRRNVKAALVARENQKMMERITRSKSLYSKENMRQHRVCHKRILRLRKTDYTAGHLLAAATASRHWRGGDSRDE------EGR-HRHRRRXXXSQRNRRVSGGSKEYVNATSTPP--------PVARGTSYSPTRGEHSRSVHRVDGGG--LGGRGTKSAPRLPSLLDVEDIYGGGSILGSPNLEQCLQA-AEMSARSGXXXXXXXXXXXXXXXXXXXXXRNSTAVSGNH-EDDGCRPRPFTDGGVGSRGGSRHHRK-TSRQRGGKDTAGVGGSSTGGRRGTDASLDALSHHRESLESSVEDSSGGIRRGRYGNQRGRGGGGSSGDKSSGSLASSGKSADDAELDKIYNPLAFLDETQGVRVLIQATKPLEVDGALLADWDRALKGWWLVVYRLRQLNHLSRGSFVTDDRKDVFLPPPWLPPKVSSRAGETWICFIRIMVQDPFDNQLDVRIIHDREEICQRLLSLEEATVICEHAKATSSGGGGMAPGDRPSLFAPRAAAAAPKRSLP--LPGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQTRP---FAGLKQYSASDENLSELLSALFKQADVEEKGFLTPEQLTSIMQNAELGLTGPELHLVIAEADENADGTIDYYEFIPLAYNLVDAFRARHRACEEMDEANLDLDQQLSAYNGDSLPKGNSRRVGYLKPLPLVLDLPPLPALRPIEDVWSMVQPLRHTKHKSTLRCSHPTHGILASRRDDRTTIHLVHFSFPRKAIHALYDAEFDRLVRQLKALCKSQDANGTGVLPRAEFKQCISADRC-GGLTKIESKLLLNLLPKDSHGNVVYRKLGAGLEQVRFTTLRNTVAEASASDTQKYLMALCREEEAKSDPLGNKGHMKSNGDAVAIGGKHYSGVLRARQLTKLLLNAPLLSLSRLHVTALMSQANILDGMVNYVELVPMIAKTIEGMFHPWSIKMRHEIFNNNRGPXXXXXXXXXXXXXXXXXXXXXXXTATVRGKSRDDIQRKIVEILRE 1179          
BLAST of mRNA_P-fluviatile_contig8.14564.1 vs. uniprot
Match: A0A7S3NKP0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKP0_9STRA)

HSP 1 Score: 140 bits (353), Expect = 5.400e-30
Identity = 116/446 (26.01%), Postives = 208/446 (46.64%), Query Frame = 2
Query: 2090 NLSDLLSTLFNEADTEKKGFLTPEQLTSIMKTAELGLTGPELHLVIAEADDNADGNIDYYEFIPLAYNLVNAFRARRRACEQMDEANLDLDQQAIHELYDAEFDR---LVRQLKAICKAQDANGTGVLPRAEFKQCISADRCFGGLTKLEAKLLLNLLPKDSHGNVIYRKIGAGLEQVRFTTLRNTMAEARASDTQKYLMSLCREEEAKCDPLGGKGQAKADGDTMAVGSKQCSGMLRARQLTKLLLSAPLLSLSRLHVTALMSQAHIVDGMVNYVDLVPIIAKTIEGMFHPRSLKMRHDIFKSRGSGGTGXXXXXXXXXXXXXXGSQPQATATVLGKSRDDVQ-RIFVDVLRE---------DNQGAGIEQLKDPATFARCMASLGLNLEPDTISALWVAADLDSREGATFVDVVDFCFNCVLFMEREKEVKSLQRGKESLVARG 3388
            +L + L  +F EAD +  G L+ ++  ++++  +LGLT  E+ +++ E D+N D ++ Y EF+P+A +L+ +F+ARR A          ++Q  +  L +A       L +    +    D  G G L + EFK+C+  +     L+K E  ++L  +P D+ G +I+++    +  V+ TT++  + E +AS+ ++ L  LCREEE         G   +      +      G +  +Q+  +L + P + LSRL +T+++S+A   D MVNY   +P+ A  I+        K+R   F                        ++ Q  A  L    D V  ++  D+ RE          +  AG++Q +    F  CM SL L L    I AL V AD D        + ++F    ++ + +E+ +  L++  E+ +ARG
Sbjct:  292 DLQETLLNMFQEADDDGNGTLSKDEFQNLLQDTDLGLTEAEMLILLDEVDENDDEHVCYEEFMPVAIDLLQSFKARRFAKRAQAVTEQQIEQVVMATLEEAPEHNPKNLAQAAMQVFMEADQRGQGTLAKHEFKRCLKHESL--NLSKTEQYMVLKQMPVDAFGKIIFKQYKDIVHGVKHTTVKREILENQASEMEEILFGLCREEERNNIHHETPGDQDSISTPAVIVDFIYDGHITMKQIQSVLAN-PKIGLSRLQITSVLSEAESYDNMVNYYQFIPLAATIID--------KLRDSAFIE----------------------AKTQVLAKNLRGVGDKVNTKLEADLARELHELFDQHDTDNSAGLDQTE----FGLCMESLELGLTKVNIDALMVQADTDHNGVVDRSEFMEFTLKNLVGLIKERRLALLRKDVEA-IARG 699          
BLAST of mRNA_P-fluviatile_contig8.14564.1 vs. uniprot
Match: A0A7S0SSP5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SSP5_9STRA)

HSP 1 Score: 113 bits (282), Expect = 6.390e-24
Identity = 87/286 (30.42%), Postives = 135/286 (47.20%), Query Frame = 2
Query: 2516 LTKLEAKLLLNLLPKDSHGNVIYRKIGAGLEQVRFTTLRNTMAEARASDTQKYLMSLCREEEAKCDPL-GGKGQAKADGDTMAVGSKQCSGMLRARQLTKLLLSAPLLSLSRLHVTALMSQAHIV-DGMVNYVDLVPIIAKTIEGMFHPRSLKMRHDIFKSRGSGGTGXXXXXXXXXXXXXXGSQPQATATVLGKSRDDVQRIFVDVLRE---DNQGAGIEQLKDPATFARCMASLGLNLEPDTISALWVAADLDSREGATFVDVVDFCFNCVLFMEREKEVKSLQ 3358
            ++ +E  ++  LLPKDS G +IY  +   L +V+F TL+N++ E++ SD Q+YL  LC+ EE K   L GG+    A             G L  R L  +L +AP LSL+RL V  ++S+A I  DG++NY   VPII+KTIE MF P +LK R ++ ++                      S   +   + G ++D+ ++  + + +    D  G       D   F  C+ SL LNL    I                    + F  N ++ +E+EK +K LQ
Sbjct:    4 VSDIEINMICQLLPKDSFGRIIYNNLEDILLKVKFITLKNSIIESQGSDLQRYLFDLCKIEEDKMKQLKGGEDNISA-------------GFLPLRTLINILYNAPRLSLTRLQVLVILSEATISNDGLINYYSFVPIISKTIELMFSPLALKQRAELIETV---------------------SFSPSEILLSGLNKDEFEKKLMTLFKSYDIDKNG-----YLDEYEFIACIESLELNLTRSEIMVXXXXXXXXXXXXXXXXXXIGFFVNNLIHLEKEKHLKILQ 250          
BLAST of mRNA_P-fluviatile_contig8.14564.1 vs. uniprot
Match: A0A8J4CQW5_9CHLO (Uncharacterized protein n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4CQW5_9CHLO)

HSP 1 Score: 116 bits (290), Expect = 3.880e-23
Identity = 118/460 (25.65%), Postives = 200/460 (43.48%), Query Frame = 2
Query: 2033 GLRPRSSVMALEQFATSDGNLSDLLSTLFNEADTEKKGFLTPEQLTSIMKTAELGLTGPELHLVIAEADDNADGNIDYYEFIPLAYNLVNAFRARRRACEQMDEANL----DLDQQAIHELYDAEFDRLVRQLKAICKAQDANGTGVLPRAEFKQCISADRCFGGLTKLEAKLLLNLLPKDSHGNVIYRKIGAGLEQVRFTTLRNTMAE----ARASDTQKYLMSLCREEEAKCDPLGGKGQAKADGDTMAVGSKQCSGMLRARQLTKLL--LSAPLLSLSRLHVTALMSQAHIV-DGMVNYVDLVPIIAKTIEGMFHPRSLKMRHDIFKSRGSGGTGXXXXXXXXXXXXXXGSQPQATATVLGKSRDDVQRIFVDVL-REDNQGAGIEQLKDPATFARCMASLG----LNLEPDTISALWVAADLDSREGATFVDVVDFCFNCVLFMEREKEVKSLQRG 3364
            GL    + + ++    S  +L  +L  LF EAD +  GFL  ++ TS+++ A L L+  ++  ++AEAD+N D  I Y EF+P+  +++ + +A+ +A   M         +++   +H L   E   L+  LK   KA DA+G+G L R EFK+ + A     GLT+ +  L+L+ +  D  G V Y +      QV     ++ +          + Q+ L++  +E               AD D         +G+L  RQ+  +   LS   L L+ L   +L+SQA    DGMV Y+  VP+ A  I  M    ++K R    K+  + G                G Q      +     D ++ +  D   R D +G G   L         + SL     L L    + A++ A D+D      + ++V+F  + +  +ERE  + S+  G
Sbjct:   76 GLDVEEAAVMIDIATASSADLEPVLMKLFIEADKDHSGFLDRQEFTSVLRNANLRLSDRQIRQILAEADENDDDVIQYKEFLPIMVDILQSIKAKEQAKAMMHGVETMVRTEVETMLLHGLPQEELQALM--LKVFKKA-DADGSGQLNRHEFKEALKAAEL--GLTRKDINLILSHIDIDKDGLVSYEEFIPVCFQVLVERFKDEIVVNDILGNTDELQQMLLTAFQE---------------ADPDN--------TGLLTQRQVKAIFKELSYRALGLTTLQTVSLISQAPTTPDGMVQYIQFVPLAASIIRSMNDVETMKSRMSAIKAVAAAG----------------GIQALGALDL-----DTLRAVLSDAFQRVDEEGTGQLALPQVMEVIESLNSLAPDANLELSDQHMKAMFAAIDVDESGTVDWTELVNFLCDALEHVEREAYIASMGVG 486          
BLAST of mRNA_P-fluviatile_contig8.14564.1 vs. uniprot
Match: D8TZ99_VOLCA (Radial spoke protein 7 n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TZ99_VOLCA)

HSP 1 Score: 114 bits (284), Expect = 5.590e-22
Identity = 114/434 (26.27%), Postives = 189/434 (43.55%), Query Frame = 2
Query: 2114 LFNEADTEKKGFLTPEQLTSIMKTAELGLTGPELHLVIAEADDNADGNIDYYEFIPLAYNLVNAFRARRRACEQM----DEANLDLDQQAIHELYDAEFDRLVRQLKAICKAQDANGTGVLPRAEFKQCISADRCFGGLTKLEAKLLLNLLPKDSHGNVIYRKIGAGLEQVRFTTLRNTMAE----ARASDTQKYLMSLCREEEAKCDPLGGKGQAKADGDTMAVGSKQCSGMLRARQLTKLL--LSAPLLSLSRLHVTALMSQAHIV-DGMVNYVDLVPIIAKTIEGMFHPRSLKMRHDIFKSRGSGGTGXXXXXXXXXXXXXXGSQPQATATVLGKSRDDVQRIFVDVLREDNQGAGIEQLKDPATFARCMASLG----LNLEPDTISALWVAADLDSREGATFVDVVDFCFNCVLFMEREKEVKSLQRGKE 3370
            LF EAD ++ GFL  ++LTS+++ A L L+  ++  ++AEAD+N D  I Y EF+P+  +++ + +A+ +A   M         +++   +H L   E   L+  LK   KA DA+G+G L R EFK+ + A     GLT+ +  L+L+ +  D  G V Y +      QV     ++ +      +   + Q+ L++  R+               AD +         +G+L  RQ+  +   LS   L L+ L   +L+SQA    DGMV Y+  VP+ A  I  M    S+K R    K+    G                    +    VL    D  QR+       D +G G   L         + SL     L L    + A++ A D D      + ++V+F  + +  +ERE  + ++  G E
Sbjct:  196 LFIEADRDRSGFLDRQELTSVLRNANLRLSDRQIRQILAEADENDDDVIQYKEFLPIMVDVMQSIKAKEQAKAMMHGVESMVRTEVESMLLHGLPQEELQALM--LKVFRKA-DADGSGTLNRHEFKEALKAAEL--GLTRKDINLILSHIDVDKDGLVSYEEFIPVCFQVLVERFKDEIVVNDILSNTDELQQMLLTAFRD---------------ADSEN--------TGLLTQRQVKAIFKELSYQALGLTTLQTVSLLSQAPTTPDGMVQYIQFVPLAASIIRSMNDVESMKSRMSAIKAVAEAG----------GIQALGALDLEQLRAVLS---DSFQRV-------DEEGTGQLTLPQVTEVIESLNSLAPEANLALSEQHMKAMFAAIDADESGTVDWTELVNFICDALEHVEREAYIANMGVGAE 581          
BLAST of mRNA_P-fluviatile_contig8.14564.1 vs. uniprot
Match: A0A1Y1HXM2_KLENI (Troponin C n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HXM2_KLENI)

HSP 1 Score: 111 bits (277), Expect = 1.160e-21
Identity = 119/438 (27.17%), Postives = 191/438 (43.61%), Query Frame = 2
Query: 2081 SDGNLSDLLSTLFNEADTEKKGFLTPEQLTSIMKTAELGLTGPELHLVIAEADDNADGNIDYYEFIPLAYNLVNAFRARR--RACEQMDEANL--DLDQQAIHELYDAEFDRLVRQLKAICKAQDANGTGVLPRAEFKQCIS-ADRCFGGLTKLEAKLLLNLLPKDSHGNVIYRKIGAGLEQVRFTTLRNTMAEARASDTQKYLMSLCREEEAKCDPLGGKGQAKADG------DTMAVGSKQCSGMLRARQLTKLL--LSAPLLSLSRLHVTALMSQAHI-VDGMVNYVDLVPIIAKTIEGMFHPRSLKMRHDIFKSRGSGGTGXXXXXXXXXXXXXXGSQPQATATVLGKSRDDVQRIFVDVLRE-DNQGAGIEQLKDPATFARCMASLGLNLEPDTISALWVAADLDSREGATFVDVVDFCFNCVLFMEREKEVK 3349
            S   L DL+ + F +AD+++ G+L P +  + M+ + L  +  EL  V+AE D+N DGNI Y EF+P+   +++  RA+    A    DEA     +  Q +H +  AE + ++R    + +A D NG   L R EFK C+  AD    GLT+ E  LLL    ++  G++ Y +         F  L   +   R SD       L RE++A+           AD          A   ++ +G+L  RQ+  +L  LS   L L+R+ V  LMS+A    +G VNY       A  I  +        R    +S                      S+      +   SRD V+ I  +  R  D QGAG  +  +     + +AS  L L P  ++ L  A + +S     +  ++ F F+ +  ++RE+ V+
Sbjct:   74 SASELEDLILSHFLKADSDRNGYLDPREFAAAMEQSGLFRSEAELLNVLAECDENEDGNIQYREFLPIMVQVIHGMRAKALLAASRNADEAQARSTVQTQLLHGMPRAELEAMMR---GVFRAADVNGDRRLDRKEFKNCLRHADV---GLTRQEINLLLAKADRNGDGSISYEE---------FLPLCFNILVERFSD------ELVREKQAR----------SADDIEVLLVQAFAAEDRERTGLLLQRQIKGVLTDLSREGLGLTRMQVLTLMSEAEPDEEGYVNYRRFASGAAHMIHSLVDVSHQADRAAAIESL---------------------SRSAGVQQLRNLSRDAVRGILEEAFRAADEQGAGALERSEVIEVLQELASSQLGLTPRDVNCLMAALEENSEGAIEYEQLISFTFDVLQHLDREEYVQ 459          
BLAST of mRNA_P-fluviatile_contig8.14564.1 vs. uniprot
Match: C1MX73_MICPC (Flagellar radial spoke protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MX73_MICPC)

HSP 1 Score: 107 bits (266), Expect = 3.750e-20
Identity = 101/432 (23.38%), Postives = 181/432 (41.90%), Query Frame = 2
Query: 2084 DGNLSDLLSTLFNEADTEKKGFLTPEQLTSIMKTAELGLTGPELHLVIAEADDNADGNIDYYEFIPLAYNLVNAFRARRRACEQMDEANLDLDQQA-IHELYDAEFDRLVRQLKAICKAQDANGTGVLPRAEFKQCISADRCFGGLTKLEAKLLLNLLPKDSHGNVIYRKIGAGLEQVRFTTLRN-TMAEARASDTQKYLMSLCREEEAKCDPLGGKGQAKADGDTMAVGSKQCSGMLRARQLTKLLLSAPLLSLSRLHVTALMSQAHIVDG-MVNYVDLVPIIAKTIEGMFHPRSLKMRHDIFKSRGSGGTGXXXXXXXXXXXXXXGSQPQATATVLGKSRDDVQRIFVDVLRE-DNQGAGIEQLKDPATFARCMASLGLNLEPDTISALWVAADLDSREGATFVDVVDFCFNCVLFMEREKEVKSLQRGK 3367
            D  LS+ +   F + DT+  G+L  ++  +++   E+GL+  +   +++EAD+N DG ++Y EF+P+   +V+                 D  +Q   H L+    + L   ++ I    DA+G G L R EF +C+ +     GLT+ E  LLL+ +  D  G V Y +       +     ++  +AEA         M+L  E + K   +GGK +            K    +++   +    LSA  L LS+L +TA+MS+A  ++   V+Y    P  A+ I  M    S   R +                          S  +    +    RDDV+ +     ++ D +G G             + +  L+L+P  I+AL  A D +     T+ ++ DF    +  + RE+ ++ +  G+
Sbjct:   79 DDELSEFIMDQFMKYDTDGSGYLDRKEFKALLTGTEMGLSKKDARRLLSEADENDDGVLEYTEFVPIMTEIVSNXXXXXXXXXXXXXXXDDAREQVQYHLLHGMPREELEEMMERIFSDADADGNGTLDRKEFSKCLHSAEL--GLTRKEINLLLSDVDVDDDGLVSYSEFAPLCFDILVERFKDDVLAEAALESADALTMALIEEFQRKETTIGGKDEPLG---------KMHRNLVKQALVD---LSAEFLGLSKLQITAIMSEATTIENDEVDYEIFAPSAARMIYSMVDTASQAQRVNAIAKL---------------------SNTEGAHVLHQSDRDDVRELIALAFQDADVEGRGALDRDQVYDILSDLGANSLDLKPGEINALVSAVDENEDGEVTYAELTDFLCKVLEHLSRERWIQEVAFGE 475          
BLAST of mRNA_P-fluviatile_contig8.14564.1 vs. uniprot
Match: A0A8J6CC86_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CC86_DIALT)

HSP 1 Score: 104 bits (259), Expect = 1.590e-19
Identity = 86/293 (29.35%), Postives = 135/293 (46.08%), Query Frame = 2
Query: 2093 LSDLLSTLFNEADTEKKGFLTPEQLTSIMKTAELGLTGPELHLVIAEADDNADGNIDYYEFIPLAYNLVNAFRARRR-ACEQMDEANLDLDQQAIHELYDAEFDRLVRQLKAICKAQDANGTGVLPRAEFKQCI-SADRCFGGLTKLEAKLLLNLLPKDSHGNVIYRKIGAGLEQVRFTTLRNTMAEARASDTQKYLMSLCREEEAKCDPLGGKGQAKADGDTMAVGSKQCSGMLRARQLTKLLLSAPLLSLSRLHVTALMSQA-HIVDGMVNYVDLVPIIAKTIEGMFHPRS 2962
            L  LL  LF E D +  G L  ++  +++ +A LGL+  E+  V+AEAD+N DG I+Y EFIP+A  LV A  A+     E+ ++AN        H L+    + L   +  I +  D +G+G L R EF  C+  AD    GL + E  L++  +  D  G + Y +      Q+    L++ M  A+ + TQ   + L                     D M+      +G+L A  +  L+ SA    L+RL +  ++++A    DG V YV   PI A  I  +  P +
Sbjct:   66 LEQLLRQLFAEHDVDGNGHLDHKEFRALLNSANLGLSPREVKRVLAEADENEDGRIEYTEFIPVAIELVQAMYAKMDLVAEKQEQANAARQAAEAHMLHGMPREALEAIMSDIFRKADLDGSGTLSRKEFNTCLREADL---GLKRKEINLIMAEVDTDEDGTITYAEFVPLCYQILVEILKDEMVAAQQTPTQLEELLL---------------------DLMSSSDAAETGLLPAATVKDLIRSADF-GLTRLQIHTVLAEADEDGDGRVQYVAFAPIAADLIYRLLDPEA 333          
BLAST of mRNA_P-fluviatile_contig8.14564.1 vs. uniprot
Match: A0A482S1E4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1E4_9ARCH)

HSP 1 Score: 102 bits (254), Expect = 3.590e-19
Identity = 56/158 (35.44%), Postives = 89/158 (56.33%), Query Frame = 2
Query: 2528 EAKLLLNLLPKDSHGNVIYRKIGAG----LEQVRFTTLRNTMAEARASDTQKYLMSLCREEEAKCDPLGGKGQAKADGDTMAVGSKQCSGMLRARQLTKLLLSAPLLSLSRLHVTALMSQAHIVDGMVNYVDLVPIIAKTIEGMFHPRSLKMRHDIFK 2989
            E  +L  +LP+D  G + Y          L +VRF  ++N + EA+ S  QKYL+ LCREEEA+ +   G  +               +G++  R L  +L ++  LSLSRL V  +MS+A ++DGM+NY   +P++AK IE MF P++L+ R ++ +
Sbjct:   17 EVNMLCQMLPRDQFGRIKYNTTPTAFFETLSKVRFMAMKNALIEAQGSGLQKYLLDLCREEEARLEHFEGNMEKFVP-----------TGIVPCRSLINILSNSSRLSLSRLQVLVIMSEASVLDGMINYFQFIPVVAKAIEIMFEPKALRQRAELIE 163          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIM5_ECTSI0.000e+063.99Radial spoke protein 7 n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5K287_9PHAE0.000e+055.43EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S3NKP0_9STRA5.400e-3026.01Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S0SSP5_9STRA6.390e-2430.42Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A8J4CQW5_9CHLO3.880e-2325.65Uncharacterized protein n=3 Tax=Volvox TaxID=3066 ... [more]
D8TZ99_VOLCA5.590e-2226.27Radial spoke protein 7 n=1 Tax=Volvox carteri f. n... [more]
A0A1Y1HXM2_KLENI1.160e-2127.17Troponin C n=1 Tax=Klebsormidium nitens TaxID=1052... [more]
C1MX73_MICPC3.750e-2023.38Flagellar radial spoke protein n=2 Tax=Micromonas ... [more]
A0A8J6CC86_DIALT1.590e-1929.35Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A482S1E4_9ARCH3.590e-1935.44Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:2710720..2722252 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score115.2
Seed ortholog evalue2.7e-22
Seed eggNOG ortholog3067.XP_002951788.1
KEGG koko:K09338
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRadial spoke protein 7
Ec32 orthologEc-11_004410.1
Exons15
Model size4757
Cds size4506
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817249.8009863-UTR-P-fluviatile_contig8:2710719..27107771622817249.8009863-UTR-P-fluviatile_contig8:2710719..2710777Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 2710720..2710777 +
1693571707.1322632-UTR-P-fluviatile_contig8:2710719..27107771693571707.1322632-UTR-P-fluviatile_contig8:2710719..2710777Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 2710720..2710777 +
1622817249.9952953-UTR-P-fluviatile_contig8:2722059..27222521622817249.9952953-UTR-P-fluviatile_contig8:2722059..2722252Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 2722060..2722252 +
1693571724.5652237-UTR-P-fluviatile_contig8:2722059..27222521693571724.5652237-UTR-P-fluviatile_contig8:2722059..2722252Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 2722060..2722252 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817249.8123803-CDS-P-fluviatile_contig8:2710777..27109211622817249.8123803-CDS-P-fluviatile_contig8:2710777..2710921Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2710778..2710921 +
1693571707.14231-CDS-P-fluviatile_contig8:2710777..27109211693571707.14231-CDS-P-fluviatile_contig8:2710777..2710921Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2710778..2710921 +
1622817249.8228316-CDS-P-fluviatile_contig8:2711383..27118421622817249.8228316-CDS-P-fluviatile_contig8:2711383..2711842Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2711384..2711842 +
1693571707.1512203-CDS-P-fluviatile_contig8:2711383..27118421693571707.1512203-CDS-P-fluviatile_contig8:2711383..2711842Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2711384..2711842 +
1622817249.8354058-CDS-P-fluviatile_contig8:2712221..27132081622817249.8354058-CDS-P-fluviatile_contig8:2712221..2713208Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2712222..2713208 +
1693571707.1604116-CDS-P-fluviatile_contig8:2712221..27132081693571707.1604116-CDS-P-fluviatile_contig8:2712221..2713208Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2712222..2713208 +
1622817249.8472269-CDS-P-fluviatile_contig8:2713487..27135831622817249.8472269-CDS-P-fluviatile_contig8:2713487..2713583Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2713488..2713583 +
1693571707.172266-CDS-P-fluviatile_contig8:2713487..27135831693571707.172266-CDS-P-fluviatile_contig8:2713487..2713583Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2713488..2713583 +
1622817249.8592792-CDS-P-fluviatile_contig8:2714069..27144681622817249.8592792-CDS-P-fluviatile_contig8:2714069..2714468Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2714070..2714468 +
1693571707.1816092-CDS-P-fluviatile_contig8:2714069..27144681693571707.1816092-CDS-P-fluviatile_contig8:2714069..2714468Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2714070..2714468 +
1622817249.8715754-CDS-P-fluviatile_contig8:2714733..27148531622817249.8715754-CDS-P-fluviatile_contig8:2714733..2714853Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2714734..2714853 +
1693571707.1903691-CDS-P-fluviatile_contig8:2714733..27148531693571707.1903691-CDS-P-fluviatile_contig8:2714733..2714853Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2714734..2714853 +
1622817249.883412-CDS-P-fluviatile_contig8:2715091..27151961622817249.883412-CDS-P-fluviatile_contig8:2715091..2715196Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2715092..2715196 +
1693571707.2000065-CDS-P-fluviatile_contig8:2715091..27151961693571707.2000065-CDS-P-fluviatile_contig8:2715091..2715196Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2715092..2715196 +
1622817249.896397-CDS-P-fluviatile_contig8:2715677..27159201622817249.896397-CDS-P-fluviatile_contig8:2715677..2715920Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2715678..2715920 +
1693571707.2120156-CDS-P-fluviatile_contig8:2715677..27159201693571707.2120156-CDS-P-fluviatile_contig8:2715677..2715920Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2715678..2715920 +
1622817249.90864-CDS-P-fluviatile_contig8:2716472..27166451622817249.90864-CDS-P-fluviatile_contig8:2716472..2716645Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2716473..2716645 +
1693571707.234694-CDS-P-fluviatile_contig8:2716472..27166451693571707.234694-CDS-P-fluviatile_contig8:2716472..2716645Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2716473..2716645 +
1622817249.919859-CDS-P-fluviatile_contig8:2717181..27173111622817249.919859-CDS-P-fluviatile_contig8:2717181..2717311Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2717182..2717311 +
1693571707.2473538-CDS-P-fluviatile_contig8:2717181..27173111693571707.2473538-CDS-P-fluviatile_contig8:2717181..2717311Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2717182..2717311 +
1622817249.9319956-CDS-P-fluviatile_contig8:2717921..27181461622817249.9319956-CDS-P-fluviatile_contig8:2717921..2718146Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2717922..2718146 +
1693571707.2583628-CDS-P-fluviatile_contig8:2717921..27181461693571707.2583628-CDS-P-fluviatile_contig8:2717921..2718146Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2717922..2718146 +
1622817249.9438434-CDS-P-fluviatile_contig8:2718635..27187191622817249.9438434-CDS-P-fluviatile_contig8:2718635..2718719Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2718636..2718719 +
1693571716.7551615-CDS-P-fluviatile_contig8:2718635..27187191693571716.7551615-CDS-P-fluviatile_contig8:2718635..2718719Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2718636..2718719 +
1622817249.9541862-CDS-P-fluviatile_contig8:2719427..27195471622817249.9541862-CDS-P-fluviatile_contig8:2719427..2719547Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2719428..2719547 +
1693571722.2985077-CDS-P-fluviatile_contig8:2719427..27195471693571722.2985077-CDS-P-fluviatile_contig8:2719427..2719547Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2719428..2719547 +
1622817249.9670906-CDS-P-fluviatile_contig8:2720156..27203151622817249.9670906-CDS-P-fluviatile_contig8:2720156..2720315Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2720157..2720315 +
1693571724.5348382-CDS-P-fluviatile_contig8:2720156..27203151693571724.5348382-CDS-P-fluviatile_contig8:2720156..2720315Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2720157..2720315 +
1622817249.9812303-CDS-P-fluviatile_contig8:2720997..27220591622817249.9812303-CDS-P-fluviatile_contig8:2720997..2722059Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2720998..2722059 +
1693571724.5550914-CDS-P-fluviatile_contig8:2720997..27220591693571724.5550914-CDS-P-fluviatile_contig8:2720997..2722059Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2720998..2722059 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14564.1prot_P-fluviatile_contig8.14564.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 2710778..2722059 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14564.1

>prot_P-fluviatile_contig8.14564.1 ID=prot_P-fluviatile_contig8.14564.1|Name=mRNA_P-fluviatile_contig8.14564.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1502bp
MAASVCSLGPPSVGPGNSAPTIGFAVSARPCSRHPNKEPLSGNTLCHKIN
VERKQAIHEKRLATVKPSLSLSTPRRMEFMDKRLSKNFHTRRHHEQVVHE
NLKLLRALEEIHSRSNTNAAAGALSSARGGGDDNATFLIGNNGRGGVITA
PAGLKRRKGQQPGSAVNSRQSSSRKKLSSLLARQRNVKAALVARENQKMI
ERMTRSKSLYSRETMRQHRIRHKRVLRLRKTDYTAGHLLAAATAKRHWGG
GNACDEGFSYSFEGEEHSRRRNPERSRAPGKHSHGSRDTSCPTGAASSCS
SSAARGTSHSPPRSLNSRSIFIGGGGVKIGGQGSRSAPRLPSLLHDDDMY
GGGSILESPSLEQCLLATAECDGGWDGGNGGGDGGGGGSRTHDSGNHHKD
DGSRLRNPTDVGVGSRGGSLQHRKPSSRQRGGKDASSSVDSTGGMRGTEA
SVDSLFQSSGSVPTSGGHRGSQQHKEEGGGRDERSTGSLANDMMVRDADL
DRIFNPLAFMDETQGVRVLIQATKPLEVRSHVGETWICFIRILVKDPFDG
QLDIRVIHDREEVCRRLLSLEEANAICEHAQMLLGGKTVRDWPFPFAPLP
PLLPGAPSNVPAGGHATVDSTSTAAEPLSESLRAAADSAAAADTGAAAVK
KVGGGASPGLRPRSSVMALEQFATSDGNLSDLLSTLFNEADTEKKGFLTP
EQLTSIMKTAELGLTGPELHLVIAEADDNADGNIDYYEFIPLAYNLVNAF
RARRRACEQMDEANLDLDQQAIHELYDAEFDRLVRQLKAICKAQDANGTG
VLPRAEFKQCISADRCFGGLTKLEAKLLLNLLPKDSHGNVIYRKIGAGLE
QVRFTTLRNTMAEARASDTQKYLMSLCREEEAKCDPLGGKGQAKADGDTM
AVGSKQCSGMLRARQLTKLLLSAPLLSLSRLHVTALMSQAHIVDGMVNYV
DLVPIIAKTIEGMFHPRSLKMRHDIFKSRGSGGTGGGGVSGGGGGMGEGG
SQPQATATVLGKSRDDVQRIFVDVLREDNQGAGIEQLKDPATFARCMASL
GLNLEPDTISALWVAADLDSREGATFVDVVDFCFNCVLFMEREKEVKSLQ
RGKESLVARGTPGAAVVARHGAAAVGEPPAGKVDPLLSLARALVRHAKVT
APSEGKVGLEFLLDRQVSSSEDGGSTTPGDAASSSAEEARHGQQKSVDGR
GGLPLVCSDAAKMTLSASAGACQGVPDSNGSGGGGGGGGGGRSSSAGGRE
GVTVGLDLRSEVPGATIRYRDRRKLPVIGAAGQSKIVAPSTLAFASPSSS
SSSSSPTTTTTAADAAAWKAAPSGGGARPAIQGGGGATMPSESKTKKKSG
GRAESISSSSSSSGRRSNGSSIEVAEEAAQGETLDMVVHVFWNGAARDRA
YIEAFLPENGRGGAGSCDESCGGKPLILRLSVRVPTLAIVDAQAASKFAE
RMVEQIAILVVENETVGLAGRKVAVGQPQRHRGYKLWLAGVGPKSVVSGI
P*
back to top

mRNA from alignment at P-fluviatile_contig8:2710720..2722252+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14564.1 ID=mRNA_P-fluviatile_contig8.14564.1|Name=mRNA_P-fluviatile_contig8.14564.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11533bp|location=Sequence derived from alignment at P-fluviatile_contig8:2710720..2722252+ (Porterinema fluviatile SAG_2381)
GCGCGAGTGAGTGCTGCTGCTTGCTTCCCGCGTAGGCGCTGCTCCTTGAA TCTTTAGGATGGCTGCAAGCGTGTGCAGCCTTGGACCTCCAAGCGTAGGT CCGGGGAACTCGGCTCCGACGATCGGGTTTGCCGTGTCGGCTCGACCATG TTCACGCCACCCCAACAAAGAACCGCTATCGGGGAACACGCTGTGCCACA AGGTTTGCATTTTTCGTGAATAGCGCAGTTATCTATCATCTCGCTGTGAT TTTGCGAGCGTGAGAGCTGTGTGGGACACCAGCGATCAGCTGATTTGTAC AATTACTTGTTGCATGTTGTGCAAATGTGAATATTTTGGACGTCTACAGT ATCTCGGGTCATCTTTTTTCGTTAGCGCAAATGATGCGCTTTTTGTGTTG CATCATGTCGTAAATTCGCCCGGAAGGTGTCTCACGTGCACTCTTGCGAA AACACGATGGCTCGCCACAGCACTGTCAGACTTGCGACAGGATGCATGTA ATGTGTTATCACCACAGAAGTATCGGTGCAAGAGGAAACATGCTCAACAT GTGCAAACGAACAATGTTCGTATGCGTGCCAGCGAGAACGTCAAAATTCT TGATTTCGTCTGTTGCACTACGGCGCTTGTGTTCATTCCCCAATCATTCG GCGTGGTCGACCAGATCAATGTGGAGCGGAAACAAGCCATTCACGAGAAG AGGTTGGCAACTGTCAAGCCATCCCTGTCCTTGAGCACGCCGCGTCGTAT GGAGTTCATGGACAAGCGATTGTCGAAAAACTTTCACACGCGGCGTCACC ACGAGCAAGTCGTCCACGAAAACCTTAAGCTTCTCCGAGCCCTTGAAGAA ATTCATTCTCGGAGCAACACCAACGCTGCCGCGGGTGCATTGAGCTCGGC CCGCGGAGGTGGGGATGATAATGCGACTTTTCTAATTGGCAACAATGGAA GAGGAGGAGTGATAACTGCACCAGCAGGCCTTAAGAGAAGGAAAGGACAA CAGCCGGGTTCGGCTGTCAACAGCCGTCAATCGTCCTCCAGAAAAAAGCT CAGCTCGCTTCTCGCGAGACAACGGAACGTGAAAGCAGCCTTGGTCGCAC GAGAGAACCAGAAGATGATCGAAGTGAGTTCTTAAGGCTTTCGGGTAAAC ACCTGGCTGGTACTCTTCTCGAATGGCTATTTTCAATATCGTACGTGCCG TGGCTGTGGACGGGCTACACCTAACATGAGCGATGGACATCAATGTCGTG GTATTGGTTTCGGAATTTGCCGTGGATTTGTCCTTCCCCAGGATTGGCAA TGTTGTGGCAATCTAGGACCTCGCATATTGTCCTACTTCAATCCTTTGTG CGTCTTTTGCAGGCGGCTTCACCTCTTCCCCACCAGAGCGCCATACCTCA TTTTCTATACCTAAATAGTCAATGCTCCAAAAACAGCCGGGACACAACAC GAAACGCCTCCACGAACAAACGCGCGCGCCCCTTTCCCGCACTCAACCAT AGCGCATGACCAGGTCGAAATCTCTTTACTCGCGAGAAACGATGCGCCAG CACAGAATACGCCACAAGCGAGTCTTACGCCTCAGGAAGACGGACTACAC CGCGGGTCACCTCCTGGCCGCAGCGACAGCCAAACGACACTGGGGCGGCG GCAATGCTTGCGACGAAGGCTTCTCGTACAGCTTCGAGGGAGAAGAACAC AGTCGCCGGCGCAACCCCGAACGATCCCGTGCGCCGGGAAAGCACAGTCA TGGATCGAGAGACACGTCTTGTCCAACTGGCGCCGCGAGTAGCTGTTCCT CCTCTGCCGCCAGAGGTACCTCTCACTCCCCCCCACGGAGTCTTAACAGT CGTTCCATCTTCATCGGGGGCGGCGGCGTAAAAATTGGCGGTCAGGGGTC AAGGAGCGCCCCTCGCCTTCCGTCATTGTTGCATGATGACGACATGTATG GCGGGGGCAGCATCCTCGAATCGCCGAGCCTGGAACAGTGTCTTCTAGCC ACCGCCGAATGTGATGGAGGTTGGGATGGCGGGAACGGGGGCGGGGACGG GGGTGGGGGAGGGAGTAGAACCCACGACTCCGGCAACCATCACAAAGACG ATGGCTCCAGACTCCGAAACCCCACTGATGTCGGCGTAGGCAGCAGAGGG GGGTCTCTCCAGCACCGCAAGCCTTCTTCCAGGCAGCGCGGCGGCAAGGA CGCGTCCAGTAGCGTCGACAGCACCGGTGGCATGCGCGGGACAGAGGCTA GCGTCGACTCTCTCTTTCAGTCCAGCGGAAGCGTTCCGACCTCGGGGGGG CACCGCGGTAGTCAGCAGCACAAAGAGGAGGGGGGTGGTCGTGACGAAAG GAGCACGGGCTCCTTAGCAAACGACATGATGGTCCGCGATGCCGATTTGG ACAGGATTTTCAATCCACTCGCGTTCATGGACGAAACCCAGGGGGTGCGA GTGCTCATTCAGGCCACCAAGCCGCTGGAGGTGCGCTCGGTACATCGGGC GCGTGGCTTGAGGGTCAGAGCAGTTAGTGGGAAATACACGCTAGATGGCT TATAGGTTCTTGCTGGAGTCTCGAATCGGTACCGCGGTGGCCGTTGCTGC TTGTTCCCTCGCCGAACGCAAATCGACTTTTCTGATATACGGGCTAGAAC GCGTACCGCATTGCGGTTATTTCACACGTCTCTCTCACCTCACCATCACC TCCCTGAGCCCGTGCTCCCGACCTTTCCCGGCCCCTCAATCCCCCCTCCC CTCGCACAGGTCATGAAGCACGTTGGAGAAACTTGGATTTGTTTCATCCG CATTTTGGTCAAGGATCCCTTCGACGGCCAGCTGGACATAAGGGTCATTC ACGATCGGGAGGAGGTAGGGAGGGCTCGAGCGAGTTTCTTTTCGACTTTG CCGAAGCGTCCGCGGCTTGCAGCCAAGACCCTTCGATCTTTTGATTGCTG CTTTGCTGCCGTTTGCATCGCAGAATTTGCGGGAGACGGGATAGCGGAAA TTTATTCTACGCTACCTACCAGCACCGAATCGACCATATTGTTGTTGAGG CGTGGTGTGAGGCACGCACATTGATCTCACCCCGGCCGGACCTAAACAAC AAAAAAAGAGCCGAGTTCATCATGTTCAAGCAGAGTTGTATGGGAAAAAG TCGAACTGGAAGAGTTCGGTAGGCGCACACGCATCCCGTAGTCTCTAATC TGCCAAATTTGGTTTTCTGCCTGCCCAATCGAATGGAGTGCGTGCCGCCC GGAGCCAAGCCCCTACAGAAGAAAAAACGTCCAAGCGATAAACGGCATCT TCCTTCAGACTGTCCCTTACATCCCTGAGCCCGCGTGTGCGGGAAAACAG GTTTGCAGGCGATTGCTGTCCCTGGAGGAGGCCAACGCCATCTGCGAGCA CGCGCAGATGCTGTTAGGCGGAAAAACCGTTCGCGATTGGCCTTTCCCCT TTGCACCCCTTCCACCGCTGTTACCGGGTGCGCCATCGAACGTCCCGGCC GGTGGCCACGCCACCGTCGACTCCACCAGCACTGCGGCCGAGCCGCTTTC AGAATCGCTAAGGGCAGCGGCAGACTCCGCCGCTGCAGCCGATACTGGTG CGGCGGCAGTCAAGAAGGTCGGGGGAGGGGCTAGCCCCGGCCTGCGCCCG AGGAGCTCCGTGATGGCGCTGGAGCAGTTCGCGACCAGCGACGGGAACCT GAGCGACTTGCTGTCGACTCTGTTTAATGAGGCAGACACGGAGAAGAAGG TTGTCGGCTGTAGGGGTCGCCATTGCTGCGCAAACGAACAAACGAACGGG AGAAAGAACGAACGGAGAATCTGAAAGAAAGCGGACCTCTCCTATTCACC TCCTTGTTTTCGTTTTGGTGCTCTCACTCATTCTTTGAATGTGCGCTTTG TGTCGCTCTTCACGCAACCCGGTTATTCATTTGTGTGTAGACGGGGGGGG GGCACCAGTTTATCGCTCCTACGGCATCAACTGTTTCATCGTTGCGTGAT GTCTTCCCCCACAGGGATTCCTGACACCCGAGCAGCTGACGTCGATTATG AAAACCGCCGAGCTAGGCCTGACAGGGCCAGAGCTGCACCTGGTCATCGC CGAAGCTGATGACAACGCGGACGGGAACATCGACGTGAGAGTACCACAAC GACTTTCTGCTTGTGTTCTACTCCCCTTTTTGACGCCAAGCTGCAAGTGT CTCTTGATCGAAACAATCGTGTTGGCTTGCCCCCTCCCTTACGCGTAGAG ACTGACTGCTTCACGGAAGGATTGGCTCTCATTTTGCTGGCCTCCCCTCC CCTCCCTTCCCCTCCCTCCCTTCCCCTCCCCTGCGCCCCTCCTGACACTC CTCCCGCCTACCTCCTCCGTAGTACTACGAGTTCATTCCGTTGGCCTACA ACTTGGTGAACGCTTTCCGGGCGCGGCGGCGTGCTTGCGAGCAAATGGAT GAAGCCAACCTCGACCTCGACCAACAGGTGACTTGAAACGGACTTGTGTT GCCAGCGTGGGCTCCAGGCACGGGCGGACCCGGACCCAATTCCCCCGCGA AACACCGGCTGCACTCGCTCCCTGTAGTTGAAGCGCTCCAGCGCTGCCGC CTCCTAAAGATGGCTCGGCCTAGAGCTTCCCCTAAAACGCCTAGGTTCAT CGTGGCGGCACAGAACGACCCCGCTCATGCGCTCCTAACGAGCCATCAGC TTCACCGTTTTCCACGCTCTTTGTTCCCGGCTCCCTCACATATTTCACCC GGACCACGTTGTGTGACCGGGGAACTATGCTACGGCAGAGAGAGAAGTGA GAACACGTATCTGAACGCAACATTCAAGCAAATACGGGACAACGTGTGGG AACCTGCTGTCTATTCAGCTTATCGTGGAACACGACGATGGCAAAGACGA ATACCTCCTTTGGCTCGAAATTTCTCCTCCCCCTTCACCGATTTCCTCAC TGAAAAAGGCCATACACGAACTCTACGACGCCGAGTTCGACCGTCTCGTG CGGCAGCTGAAGGCTATCTGCAAAGCCCAGGACGCGAATGGCACGGGCGT CCTCCCCCGCGCGGAGTTCAAGCAGTGCATCTCCGCAGACCGCTGCTTTG GCGGGCTTACCAAGCTCGAGGCCAAGCTCCTCCTCAACCTCCTGCCTAAG GACTCACACGGGAACGTTATCTACCGGAAGATCGGGGCCGGTTTAGAACA GGTGGAGGACGGGGCACTTCGTGTGTGTGGTGTCAATACGTGGGTAGTAC AACTGCACGTACAAAACACATTTGTCACGTACAGAACGACTTCAGCGCTT GTCACTGCCCTCAAGGTTTCGCCTCTGGAAAGCTACACCACACGCGTGGA GAAATTCGCTTGGACGCACGCGACAAACGCCGAGCCCACGTGTTGAGACC CTGTGTGACCTCGTACAGCCCAGATATTTGTCGAAGATTTCCTCGCCCAT GCTTGTAAAGGAAATACAACGTCTCCACACCCGAAACGTTCTCCAGGGCA CTATTATTTGGTTGGCGAGTAAGTCTGGCCAGACGCGTACAAGAATTCAC GATATTACAATTCGTGGTGAAAATAACACTTGTAGGGGAAGCCTCTCACT CGCCCAAACCCCTCATCCGCACACCACGGCGCCCTCCAAGAATGTCGAAT GGCAATGTTGATATTTCTTGTCGACGACCTATTTCTGTTAAACACGTTTC GTGTTTTCCCCCCCTCGTCCTCCCTCCCGCCACCGGCCGAAACTGTACCA CAGGTACGATTTACCACCCTGCGGAACACGATGGCGGAGGCCAGGGCGAG CGACACGCAGAAGTACCTCATGAGCCTTTGCCGAGAAGAAGAGGCCAAGT GCGACCCCCTCGGGGGTAAGGGGCAGGCGAAGGCCGACGGTGACACCATG GCTGTGGGCAGCAAGCAATGCTCCGGGTACGAACGCCGGGGGCCCGAGCA GCACTGTTACGAGGGGAGGGGGCAAGGGGAGGGGGCACAGGAGATGAGGG TACAACACATGCAGGTCTCTGTCTTCTTTAAAACACAAGGGTCCATTCGG CAGAAGTCCTAACACTGCTCAAGGCATGGGTTTTGCGGATTTATATCCCT GGATTCTGCAGGACGGCTTCCGTTGATGGCTTGATCCGATGCCTCGTTTC CCCCCCGGCGTCTCCGCGATCACTTTTACCCGTCTCCCTCTTTCCTCCGT TTATCGCCAGATCCCGAGTATTCGTGCAAGTAAAGAGGCCAGACATTTCC TTTGCTCTCGACGGCCCCTGTTTTGAATCGCCTTTTGTTTTCTCTTCGCA TGTTCGTGCTCGTACTTTGTTCGTGCATGCACATACATGTGTGCAAATAC ACGCATTTTTTTCTTTTAATTTTTTACAATCCGCTCTGCACAACGCAACA TACCGTGTGGTGGCAACGACCACAACGGCGGCGGCAATAACGTCGGGCCA TGGCGGCGGTAGGATGTTGCGGGCGCGCCAGCTGACGAAGCTCCTGCTCA GCGCGCCATTGCTCAGCCTAAGCCGGTTGCACGTGACGGCGCTGATGAGC CAAGCGCACATTGTGGACGGCATGGTCAACTACGTCGACCTGGTAAAACG CAGCTCGGTTTCTCTTTGCTTTGACGATGCGACCGTTGCACCCGACAGTT GCGCTCTTGGTTCGACCCCCCCCTATTCAACACAGTAGGCGCCTGTTTGA GCTGATAAATCGACGCAAGTGTTTCATCTCGTCACCTTTCACTGCTGGTG TCAGCTTTCTCATTGTCAACAGAACTTGCTCGTAAAAAAGGAAAAGGTGT GAGCTGAACCGCACTAACTGACGCCCATGACCTCGGAGACAGCGTCGACA TGATGCGACATCGATGGCAATCGTAGATCAACAATGATATTCTCCGTTAC GACGAAGCGGATTGCACGAGGCAAAAGAGAATACCGACGCGGAAGCAGAG CGAGGGCGGGGAGGAACGAAGGAAGGACGGAAAGGAGTTGGGGAGAGGAT AGGGGAGAGAATGAAAAACCCGGTTGCACACCCATGAAACAATCTGCAGA AACCTTCAACCCTCGCACGCGCTGCCGAGCAAAAGATTCAACAGATTTGT CTGGCATGACGCCTTCCGCAAAAAACAAACCAGTGAAAATCCCGTCGTTT CGAGCAACGGTGATCCGCAAAACATCCATACTGTAACAAAACACATGCTC AGGTGCCCATTATAGCGAAGACGATAGAAGGGATGTTCCACCCGCGTTCG CTCAAGATGAGGCACGATATTTTCAAGAGCCGAGGGAGCGGCGGGACAGG AGGCGGAGGCGTCAGCGGTGGAGGTGGGGGCATGGGGGAGGGCGGCTCCC AGCCTCAAGCCACGGCTACCGTTCTCGGCAAAAGCCGCGATGACGTTCAA AGGATCTTTGTTGATGTGCTGCGAGAGGTGGGTCGAGAAAAGGATTTTAT TAAGACATAACACCCGGGGACAAGGGATCGGGGGCGAGGTTTCAGGGCTG AGACTCGTGGAATACCGCCACAAAGTAGTACGCGAAAGTTGTCGACGCGC TATCGTTTCGGGGGATAAAGGGAACGTTTTTTCCCGTTTAACAGGAACGC GATGGGAGACGGTGAGGGGAGGGAGGGGACAAGGGGCAGACTATTGATGT CGTGCAGGCGCCGTTCCTGAAGGCGCTATTTAGCAAAATCAAAGTCTACG CCGTCACGTTCACATCAGCAAGCGCCTTCAACGGAAGGATTAGACTGCAG CGCCTGGTAAGATCTTGTGCGGATGCCAACTTCTCTGCACGTAACTAGCT CCCCCTCCCCCCCCCCCTCCCCCTCCTCTCCCCGTACCCCCCCCTTTCGG CACTGTTTTGACGGCCGACCGACTGTTCTCGTTCGACCGGCCGGCCGCCG ATGAGAATGGCGGCAGGACAACCAAGGCGCCGGCATCGAGCAGCTCAAGG ACCCCGCGACGTTTGCCAGGTGTATGGCGTCGCTGGGTCTCAACCTGGAG GTGTGGTGACGGATCAGGCCGTTTGTTGATGCACAGACCCCCCCACCTCA GTTCCCCCCAAACCCCGCCGGACCCCCACCCTGGCTAAATCGACTCGATT CGAGTCGGGGGTTGAGAGCCTTGAACACGCTACGTCTGCTCGGCTCTGGT ATCATGGTTGGGAGTTTTTCGACATCTCGCGCTTTCCGAGGTACCGCCCG CCGTTCCAAGCTGTTCGTCATACATTCTGGTGCTCGCGCATCTTAAATAG CAACAAGAGGTCACAGTGCTTTTCACCCTCACTCCCCGGTCGACATCGCC GCGCGTGTTGATTCGACGCCGTAGCGATCGCATCCGAAAATCGAGAGCCG ACCTTAATTTCTCCCATCAACACACCCCAGTTGAGTTACTTTGCCTTATT CCCAGTAACTGCCGATCAGATCTTCTCACGCTTTTCCCGTTGCCCCACGA TTTGGACCGCAAAGTATGAGCCAGTTGCTGTTTTTTTCATCGAAGTCTAC GGTCGGGTCCTCCGCGTACTTTGGCTCTCCTTCCCTCTGGCCCATCCTTC ATTTCCACTACCCCCCCTTCGCGGTTTCTGTCTCCTCTCGCTCATCTCTT GGTGTCTCTCCCCCCCCCTTCCCTTCTCGCTTTTCCTCTCCCTGTGTCCC CTTTTCCTCTGTCATCTCTTCCTCGGCGTGTGCGGTGCTCGATCTATGTC CGACCCAGCCCGACACGATCAGCGCCCTGTGGGTCGCGGCTGACCTGGAC AGCCGCGAGGGCGCAACCTTTGTGGACGTGGTGGACTTCTGCTTCAACTG CGTACTGTTCATGGAGCGGGAGAAGGAGGCGAGAGGGTCATCGCGGTCTT TTTCGATGTAGACTTTTCCGCAAGAATTGGCGGCGTTGTTCGGACATGCC GTCAACCTCCTCGCAAACGCTATGGCGGAAAATGACGACATCCGCGCCGA AAGCGCACGAAAAGTGCAGACGTGCGTGCTGACTGATGCCCGCGCGATGT ACACAATTACTGGGTGCGTCTATAGTTCATACTATCATCTTTCCGGTGAT TGAGAGGAGTTGCCCTCAAAAAACAATGGAATCAAGGAATGACACAGGGA GCGCACAAAGGATCAGAACGCGCGAAAAAAACAACACCCGTTACCCAAGA AGTTCGGGGTTGGCGAAGCGTCTCTTCTTCTGCTTGTACAGGGATCTAAA ACGTTGTCTCCGGAGCAGCAATCGATGTGCAACTTCATTGAACACTCCAT CTCGTCGCCGAACACAAAACAGCAGCACGCATAAGATTCGTCAACCTCTA GGGTATGATTCGGCGAACGTGGCACACCTACAGGATTACCTGCAGTAGGC GATCGTGACAAACATGGACAGCAAAAAAATGTGTTTATAGGTACCTTTTA TCTCCCTTTGCTGGTGCTCCCGACTGGCTTCGTCCAGGTGAAGTCCTTGC AGCGGGGGAAAGAATCGCTGGTGGCCAGGGGAACGCCCGGGGCGGCCGTG GTAGCGAGGCATGGGGCTGCGGCGGTGGGAGAGCCCCCGGCCGGAAAGGT GGACCCGTTGCTGAGCCTGGCACGGGCGCTTGTGAGGCACGCCAAGGTGA TGGGAACAAAGACCTGCCTGCCTCGTTATTTGGAATGTCCCGGCACCATG TCCAAAGGGGGCTTAGAGAGAGCGCCGGGAATAAATGGAGCTGGAGATTG GGGTCATGTATTCTTCTGCTAGTCCGCTAGTCCTCTGTGAGTTCCGCGTT ATGTAGGGGTGTGTTTTACGCGTTCTTTGCCTTCAACCGGCTGCTTTTCT CGATCCCTTCCACCGTGGTCACCTATGCAACTTCATCCCCACCTTGCTTG CTGTCACGTGGGACTCGCCTTCTTTGAGGACCGGTGTTTTGTGATGCCGC ATAAGCCTTGCTGGGAGTTTTTGGGGCAACCTACCTGAGCGGTCGGGTTG TATTGATCGATAGAGCGACACGTACGTAGTGATGGCACTCGTGGGCATTT CCTGCTTGTATTTGTTGGTTCGGGTTGCCTTTCGAGGTCGCCGACGCTCG TGGTTCTCATTTTATTGGTCAGCTTTTGTCGCTTGCGGCGCTTCGGTTTT TGAGCACAAGAAAGGAGACTCTGTTCCAGAAGGCCCAAGTTCTTGTTCAT CAAAAATGAGCAACGACCACCTGCAGTCGACCCTCCCCGTGTCGTTGTTC TTTCGCACTTCTCGACCGCCTATGGGCACGGAACTCCCGGGGCGAACGCT CCTCCCTCTCGAATCCACCAAAAAAAAGGTGACCGCTCCATCGGAAGGTA AGGTTGGTCTTGAGTTCCTGCTCGACAGGCAAGTCAGCAGCTCCGAGGAC GGCGGCAGCACGACCCCCGGCGACGCCGCGTCATCATCAGCCGAGGAAGC AAGGCATGGACAGCAGAAGTCTGTCGACGGAAGAGGAGGGCTACCGCTCG TTTGTTCGGACGCGGCGAAAATGACATTATCAGCGTCTGCCGGAGCGTGC CAGGGCGTCCCGGACAGCAACGGCAGTGGCGGCGGCGGCGGCGGCGGCGG CGGCGGAAGAAGCAGCTCGGCCGGAGGGAGGGAAGGGGTGACGGTAGGCC TGGACCTGCGGTCAGAGGTCCCCGGTGCTACGATCCGTTATCGAGATCGA CGGAAACTACCAGTCATCGGCGCAGCTGGCCAATCAAAAATAGTTGCGCC ATCTACCCTCGCCTTCGCTTCGCCGTCGTCGTCGTCGTCCTCCTCCTCCC CGACTACCACCACCACCGCCGCCGACGCCGCCGCGTGGAAAGCGGCACCG AGCGGCGGCGGCGCTCGACCCGCGATCCAAGGAGGGGGCGGTGCGACGAT GCCGTCAGAAAGCAAGACCAAGAAGAAGTCTGGTGGACGGGCCGAGTCGA TCAGTAGCAGCAGTAGCAGCAGCGGTAGGAGGAGCAACGGCAGCAGCATT GAGGTAGCCGAAGAGGCCGCCCAGGGGGAGACGCTGGATATGGTCGTCCA CGTGTTCTGGAACGGCGCCGCAAGGGATCGCGCCTACATCGAGGCGTTCC TGCCCGAAAACGGCCGGGGAGGGGCAGGTTCTTGTGACGAGAGCTGTGGC GGCAAGCCTTTGATCCTTCGCTTGAGTGTGAGAGTGCCAACGCTTGCGAT CGTCGACGCGCAGGCAGCGTCGAAATTCGCGGAGCGCATGGTGGAGCAAA TCGCCATTCTTGTCGTCGAAAACGAAACGGTCGGACTCGCTGGGAGAAAA GTAGCGGTAGGCCAACCGCAGCGGCACCGCGGATACAAGCTGTGGTTGGC CGGGGTCGGTCCGAAATCGGTGGTTTCAGGGATCCCCTAGTCGATGTTCT CCTTCAAACGGTCGTTCGTGTGGCCGATTATCAATCGCCACCACCGGGAA ATGGAGCAACACTTCAACAGAGAATAATATGTATCCATCGTTTGGTGTCA TGCCGGCTGTCAGCTTTGACTCTATAAGCATTGATTCACGAACGTTCGTG CGACGTGGGCGGCGTTAGCATTGCGCGAAGGGG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig8:2710720..2722252+

>mRNA_P-fluviatile_contig8.14564.1 ID=mRNA_P-fluviatile_contig8.14564.1|Name=mRNA_P-fluviatile_contig8.14564.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=9012bp|location=Sequence derived from alignment at P-fluviatile_contig8:2710720..2722252+ (Porterinema fluviatile SAG_2381)
ATGGCTGCAAGCGTGTGCAGCCTTGGACCTCCAAGCGTAGGTCCGGGGAA
CTCGGCTCCGACGATCGGGTTTGCCGTGTCGGCTCGACCATGTTCACGCC
ACCCCAACAAAGAACCGCTATCGGGGAACACGCTGTGCCACAAGATGGCT
GCAAGCGTGTGCAGCCTTGGACCTCCAAGCGTAGGTCCGGGGAACTCGGC
TCCGACGATCGGGTTTGCCGTGTCGGCTCGACCATGTTCACGCCACCCCA
ACAAAGAACCGCTATCGGGGAACACGCTGTGCCACAAGATCAATGTGGAG
CGGAAACAAGCCATTCACGAGAAGAGGTTGGCAACTGTCAAGCCATCCCT
GTCCTTGAGCACGCCGCGTCGTATGGAGTTCATGGACAAGCGATTGTCGA
AAAACTTTCACACGCGGCGTCACCACGAGCAAGTCGTCCACGAAAACCTT
AAGCTTCTCCGAGCCCTTGAAGAAATTCATTCTCGGAGCAACACCAACGC
TGCCGCGGGTGCATTGAGCTCGGCCCGCGGAGGTGGGGATGATAATGCGA
CTTTTCTAATTGGCAACAATGGAAGAGGAGGAGTGATAACTGCACCAGCA
GGCCTTAAGAGAAGGAAAGGACAACAGCCGGGTTCGGCTGTCAACAGCCG
TCAATCGTCCTCCAGAAAAAAGCTCAGCTCGCTTCTCGCGAGACAACGGA
ACGTGAAAGCAGCCTTGGTCGCACGAGAGAACCAGAAGATGATCGAAATC
AATGTGGAGCGGAAACAAGCCATTCACGAGAAGAGGTTGGCAACTGTCAA
GCCATCCCTGTCCTTGAGCACGCCGCGTCGTATGGAGTTCATGGACAAGC
GATTGTCGAAAAACTTTCACACGCGGCGTCACCACGAGCAAGTCGTCCAC
GAAAACCTTAAGCTTCTCCGAGCCCTTGAAGAAATTCATTCTCGGAGCAA
CACCAACGCTGCCGCGGGTGCATTGAGCTCGGCCCGCGGAGGTGGGGATG
ATAATGCGACTTTTCTAATTGGCAACAATGGAAGAGGAGGAGTGATAACT
GCACCAGCAGGCCTTAAGAGAAGGAAAGGACAACAGCCGGGTTCGGCTGT
CAACAGCCGTCAATCGTCCTCCAGAAAAAAGCTCAGCTCGCTTCTCGCGA
GACAACGGAACGTGAAAGCAGCCTTGGTCGCACGAGAGAACCAGAAGATG
ATCGAACGCATGACCAGGTCGAAATCTCTTTACTCGCGAGAAACGATGCG
CCAGCACAGAATACGCCACAAGCGAGTCTTACGCCTCAGGAAGACGGACT
ACACCGCGGGTCACCTCCTGGCCGCAGCGACAGCCAAACGACACTGGGGC
GGCGGCAATGCTTGCGACGAAGGCTTCTCGTACAGCTTCGAGGGAGAAGA
ACACAGTCGCCGGCGCAACCCCGAACGATCCCGTGCGCCGGGAAAGCACA
GTCATGGATCGAGAGACACGTCTTGTCCAACTGGCGCCGCGAGTAGCTGT
TCCTCCTCTGCCGCCAGAGGTACCTCTCACTCCCCCCCACGGAGTCTTAA
CAGTCGTTCCATCTTCATCGGGGGCGGCGGCGTAAAAATTGGCGGTCAGG
GGTCAAGGAGCGCCCCTCGCCTTCCGTCATTGTTGCATGATGACGACATG
TATGGCGGGGGCAGCATCCTCGAATCGCCGAGCCTGGAACAGTGTCTTCT
AGCCACCGCCGAATGTGATGGAGGTTGGGATGGCGGGAACGGGGGCGGGG
ACGGGGGTGGGGGAGGGAGTAGAACCCACGACTCCGGCAACCATCACAAA
GACGATGGCTCCAGACTCCGAAACCCCACTGATGTCGGCGTAGGCAGCAG
AGGGGGGTCTCTCCAGCACCGCAAGCCTTCTTCCAGGCAGCGCGGCGGCA
AGGACGCGTCCAGTAGCGTCGACAGCACCGGTGGCATGCGCGGGACAGAG
GCTAGCGTCGACTCTCTCTTTCAGTCCAGCGGAAGCGTTCCGACCTCGGG
GGGGCACCGCGGTAGTCAGCAGCACAAAGAGGAGGGGGGTGGTCGTGACG
AAAGGAGCACGGGCTCCTTAGCAAACGACATGATGGTCCGCGATGCCGAT
TTGGACAGGATTTTCAATCCACTCGCGTTCATGGACGAAACCCAGGGGGT
GCGAGTGCTCATTCAGGCCACCAAGCCGCTGGAGGTGCGCTCGCGCATGA
CCAGGTCGAAATCTCTTTACTCGCGAGAAACGATGCGCCAGCACAGAATA
CGCCACAAGCGAGTCTTACGCCTCAGGAAGACGGACTACACCGCGGGTCA
CCTCCTGGCCGCAGCGACAGCCAAACGACACTGGGGCGGCGGCAATGCTT
GCGACGAAGGCTTCTCGTACAGCTTCGAGGGAGAAGAACACAGTCGCCGG
CGCAACCCCGAACGATCCCGTGCGCCGGGAAAGCACAGTCATGGATCGAG
AGACACGTCTTGTCCAACTGGCGCCGCGAGTAGCTGTTCCTCCTCTGCCG
CCAGAGGTACCTCTCACTCCCCCCCACGGAGTCTTAACAGTCGTTCCATC
TTCATCGGGGGCGGCGGCGTAAAAATTGGCGGTCAGGGGTCAAGGAGCGC
CCCTCGCCTTCCGTCATTGTTGCATGATGACGACATGTATGGCGGGGGCA
GCATCCTCGAATCGCCGAGCCTGGAACAGTGTCTTCTAGCCACCGCCGAA
TGTGATGGAGGTTGGGATGGCGGGAACGGGGGCGGGGACGGGGGTGGGGG
AGGGAGTAGAACCCACGACTCCGGCAACCATCACAAAGACGATGGCTCCA
GACTCCGAAACCCCACTGATGTCGGCGTAGGCAGCAGAGGGGGGTCTCTC
CAGCACCGCAAGCCTTCTTCCAGGCAGCGCGGCGGCAAGGACGCGTCCAG
TAGCGTCGACAGCACCGGTGGCATGCGCGGGACAGAGGCTAGCGTCGACT
CTCTCTTTCAGTCCAGCGGAAGCGTTCCGACCTCGGGGGGGCACCGCGGT
AGTCAGCAGCACAAAGAGGAGGGGGGTGGTCGTGACGAAAGGAGCACGGG
CTCCTTAGCAAACGACATGATGGTCCGCGATGCCGATTTGGACAGGATTT
TCAATCCACTCGCGTTCATGGACGAAACCCAGGGGGTGCGAGTGCTCATT
CAGGCCACCAAGCCGCTGGAGGTGCGCTCGCACGTTGGAGAAACTTGGAT
TTGTTTCATCCGCATTTTGGTCAAGGATCCCTTCGACGGCCAGCTGGACA
TAAGGGTCATTCACGATCGGGAGGAGCACGTTGGAGAAACTTGGATTTGT
TTCATCCGCATTTTGGTCAAGGATCCCTTCGACGGCCAGCTGGACATAAG
GGTCATTCACGATCGGGAGGAGGTTTGCAGGCGATTGCTGTCCCTGGAGG
AGGCCAACGCCATCTGCGAGCACGCGCAGATGCTGTTAGGCGGAAAAACC
GTTCGCGATTGGCCTTTCCCCTTTGCACCCCTTCCACCGCTGTTACCGGG
TGCGCCATCGAACGTCCCGGCCGGTGGCCACGCCACCGTCGACTCCACCA
GCACTGCGGCCGAGCCGCTTTCAGAATCGCTAAGGGCAGCGGCAGACTCC
GCCGCTGCAGCCGATACTGGTGCGGCGGCAGTCAAGAAGGTCGGGGGAGG
GGCTAGCCCCGGCCTGCGCCCGAGGAGCTCCGTGATGGCGCTGGAGCAGT
TCGCGACCAGCGACGGGAACCTGAGCGACTTGCTGTCGACTCTGTTTAAT
GAGGCAGACACGGAGAAGAAGGTTTGCAGGCGATTGCTGTCCCTGGAGGA
GGCCAACGCCATCTGCGAGCACGCGCAGATGCTGTTAGGCGGAAAAACCG
TTCGCGATTGGCCTTTCCCCTTTGCACCCCTTCCACCGCTGTTACCGGGT
GCGCCATCGAACGTCCCGGCCGGTGGCCACGCCACCGTCGACTCCACCAG
CACTGCGGCCGAGCCGCTTTCAGAATCGCTAAGGGCAGCGGCAGACTCCG
CCGCTGCAGCCGATACTGGTGCGGCGGCAGTCAAGAAGGTCGGGGGAGGG
GCTAGCCCCGGCCTGCGCCCGAGGAGCTCCGTGATGGCGCTGGAGCAGTT
CGCGACCAGCGACGGGAACCTGAGCGACTTGCTGTCGACTCTGTTTAATG
AGGCAGACACGGAGAAGAAGGGATTCCTGACACCCGAGCAGCTGACGTCG
ATTATGAAAACCGCCGAGCTAGGCCTGACAGGGCCAGAGCTGCACCTGGT
CATCGCCGAAGCTGATGACAACGCGGACGGGAACATCGACGGATTCCTGA
CACCCGAGCAGCTGACGTCGATTATGAAAACCGCCGAGCTAGGCCTGACA
GGGCCAGAGCTGCACCTGGTCATCGCCGAAGCTGATGACAACGCGGACGG
GAACATCGACTACTACGAGTTCATTCCGTTGGCCTACAACTTGGTGAACG
CTTTCCGGGCGCGGCGGCGTGCTTGCGAGCAAATGGATGAAGCCAACCTC
GACCTCGACCAACAGTACTACGAGTTCATTCCGTTGGCCTACAACTTGGT
GAACGCTTTCCGGGCGCGGCGGCGTGCTTGCGAGCAAATGGATGAAGCCA
ACCTCGACCTCGACCAACAGGCCATACACGAACTCTACGACGCCGAGTTC
GACCGTCTCGTGCGGCAGCTGAAGGCTATCTGCAAAGCCCAGGACGCGAA
TGGCACGGGCGTCCTCCCCCGCGCGGAGTTCAAGCAGTGCATCTCCGCAG
ACCGCTGCTTTGGCGGGCTTACCAAGCTCGAGGCCAAGCTCCTCCTCAAC
CTCCTGCCTAAGGACTCACACGGGAACGTTATCTACCGGAAGATCGGGGC
CGGTTTAGAACAGGCCATACACGAACTCTACGACGCCGAGTTCGACCGTC
TCGTGCGGCAGCTGAAGGCTATCTGCAAAGCCCAGGACGCGAATGGCACG
GGCGTCCTCCCCCGCGCGGAGTTCAAGCAGTGCATCTCCGCAGACCGCTG
CTTTGGCGGGCTTACCAAGCTCGAGGCCAAGCTCCTCCTCAACCTCCTGC
CTAAGGACTCACACGGGAACGTTATCTACCGGAAGATCGGGGCCGGTTTA
GAACAGGTACGATTTACCACCCTGCGGAACACGATGGCGGAGGCCAGGGC
GAGCGACACGCAGAAGTACCTCATGAGCCTTTGCCGAGAAGAAGAGGCCA
AGTGCGACCCCCTCGGGGGTAAGGGGCAGGCGAAGGCCGACGGTGACACC
ATGGCTGTGGGCAGCAAGCAATGCTCCGGGTACGATTTACCACCCTGCGG
AACACGATGGCGGAGGCCAGGGCGAGCGACACGCAGAAGTACCTCATGAG
CCTTTGCCGAGAAGAAGAGGCCAAGTGCGACCCCCTCGGGGGTAAGGGGC
AGGCGAAGGCCGACGGTGACACCATGGCTGTGGGCAGCAAGCAATGCTCC
GGGATGTTGCGGGCGCGCCAGCTGACGAAGCTCCTGCTCAGCGCGCCATT
GCTCAGCCTAAGCCGGTTGCACGTGACGGCGCTGATGAGCCAAGCGCACA
TTGTGGACGGCATGGTCAACTACGTCGACCTGGATGTTGCGGGCGCGCCA
GCTGACGAAGCTCCTGCTCAGCGCGCCATTGCTCAGCCTAAGCCGGTTGC
ACGTGACGGCGCTGATGAGCCAAGCGCACATTGTGGACGGCATGGTCAAC
TACGTCGACCTGGTGCCCATTATAGCGAAGACGATAGAAGGGATGTTCCA
CCCGCGTTCGCTCAAGATGAGGCACGATATTTTCAAGAGCCGAGGGAGCG
GCGGGACAGGAGGCGGAGGCGTCAGCGGTGGAGGTGGGGGCATGGGGGAG
GGCGGCTCCCAGCCTCAAGCCACGGCTACCGTTCTCGGCAAAAGCCGCGA
TGACGTTCAAAGGATCTTTGTTGATGTGCTGCGAGAGGTGCCCATTATAG
CGAAGACGATAGAAGGGATGTTCCACCCGCGTTCGCTCAAGATGAGGCAC
GATATTTTCAAGAGCCGAGGGAGCGGCGGGACAGGAGGCGGAGGCGTCAG
CGGTGGAGGTGGGGGCATGGGGGAGGGCGGCTCCCAGCCTCAAGCCACGG
CTACCGTTCTCGGCAAAAGCCGCGATGACGTTCAAAGGATCTTTGTTGAT
GTGCTGCGAGAGGACAACCAAGGCGCCGGCATCGAGCAGCTCAAGGACCC
CGCGACGTTTGCCAGGTGTATGGCGTCGCTGGGTCTCAACCTGGAGGACA
ACCAAGGCGCCGGCATCGAGCAGCTCAAGGACCCCGCGACGTTTGCCAGG
TGTATGGCGTCGCTGGGTCTCAACCTGGAGCCCGACACGATCAGCGCCCT
GTGGGTCGCGGCTGACCTGGACAGCCGCGAGGGCGCAACCTTTGTGGACG
TGGTGGACTTCTGCTTCAACTGCGTACTGTTCATGGAGCGGGAGAAGGAG
CCCGACACGATCAGCGCCCTGTGGGTCGCGGCTGACCTGGACAGCCGCGA
GGGCGCAACCTTTGTGGACGTGGTGGACTTCTGCTTCAACTGCGTACTGT
TCATGGAGCGGGAGAAGGAGGTGAAGTCCTTGCAGCGGGGGAAAGAATCG
CTGGTGGCCAGGGGAACGCCCGGGGCGGCCGTGGTAGCGAGGCATGGGGC
TGCGGCGGTGGGAGAGCCCCCGGCCGGAAAGGTGGACCCGTTGCTGAGCC
TGGCACGGGCGCTTGTGAGGCACGCCAAGGTGAAGTCCTTGCAGCGGGGG
AAAGAATCGCTGGTGGCCAGGGGAACGCCCGGGGCGGCCGTGGTAGCGAG
GCATGGGGCTGCGGCGGTGGGAGAGCCCCCGGCCGGAAAGGTGGACCCGT
TGCTGAGCCTGGCACGGGCGCTTGTGAGGCACGCCAAGGTGACCGCTCCA
TCGGAAGGTAAGGTTGGTCTTGAGTTCCTGCTCGACAGGCAAGTCAGCAG
CTCCGAGGACGGCGGCAGCACGACCCCCGGCGACGCCGCGTCATCATCAG
CCGAGGAAGCAAGGCATGGACAGCAGAAGTCTGTCGACGGAAGAGGAGGG
CTACCGCTCGTTTGTTCGGACGCGGCGAAAATGACATTATCAGCGTCTGC
CGGAGCGTGCCAGGGCGTCCCGGACAGCAACGGCAGTGGCGGCGGCGGCG
GCGGCGGCGGCGGCGGAAGAAGCAGCTCGGCCGGAGGGAGGGAAGGGGTG
ACGGTAGGCCTGGACCTGCGGTCAGAGGTCCCCGGTGCTACGATCCGTTA
TCGAGATCGACGGAAACTACCAGTCATCGGCGCAGCTGGCCAATCAAAAA
TAGTTGCGCCATCTACCCTCGCCTTCGCTTCGCCGTCGTCGTCGTCGTCC
TCCTCCTCCCCGACTACCACCACCACCGCCGCCGACGCCGCCGCGTGGAA
AGCGGCACCGAGCGGCGGCGGCGCTCGACCCGCGATCCAAGGAGGGGGCG
GTGCGACGATGCCGTCAGAAAGCAAGACCAAGAAGAAGTCTGGTGGACGG
GCCGAGTCGATCAGTAGCAGCAGTAGCAGCAGCGGTAGGAGGAGCAACGG
CAGCAGCATTGAGGTAGCCGAAGAGGCCGCCCAGGGGGAGACGCTGGATA
TGGTCGTCCACGTGTTCTGGAACGGCGCCGCAAGGGATCGCGCCTACATC
GAGGCGTTCCTGCCCGAAAACGGCCGGGGAGGGGCAGGTTCTTGTGACGA
GAGCTGTGGCGGCAAGCCTTTGATCCTTCGCTTGAGTGTGAGAGTGCCAA
CGCTTGCGATCGTCGACGCGCAGGCAGCGTCGAAATTCGCGGAGCGCATG
GTGGAGCAAATCGCCATTCTTGTCGTCGAAAACGAAACGGTCGGACTCGC
TGGGAGAAAAGTAGCGGTAGGCCAACCGCAGCGGCACCGCGGATACAAGC
TGTGGTTGGCCGGGGTCGGTCCGAAATCGGTGGTTTCAGGGATCCCCTAG
GTGACCGCTCCATCGGAAGGTAAGGTTGGTCTTGAGTTCCTGCTCGACAG
GCAAGTCAGCAGCTCCGAGGACGGCGGCAGCACGACCCCCGGCGACGCCG
CGTCATCATCAGCCGAGGAAGCAAGGCATGGACAGCAGAAGTCTGTCGAC
GGAAGAGGAGGGCTACCGCTCGTTTGTTCGGACGCGGCGAAAATGACATT
ATCAGCGTCTGCCGGAGCGTGCCAGGGCGTCCCGGACAGCAACGGCAGTG
GCGGCGGCGGCGGCGGCGGCGGCGGCGGAAGAAGCAGCTCGGCCGGAGGG
AGGGAAGGGGTGACGGTAGGCCTGGACCTGCGGTCAGAGGTCCCCGGTGC
TACGATCCGTTATCGAGATCGACGGAAACTACCAGTCATCGGCGCAGCTG
GCCAATCAAAAATAGTTGCGCCATCTACCCTCGCCTTCGCTTCGCCGTCG
TCGTCGTCGTCCTCCTCCTCCCCGACTACCACCACCACCGCCGCCGACGC
CGCCGCGTGGAAAGCGGCACCGAGCGGCGGCGGCGCTCGACCCGCGATCC
AAGGAGGGGGCGGTGCGACGATGCCGTCAGAAAGCAAGACCAAGAAGAAG
TCTGGTGGACGGGCCGAGTCGATCAGTAGCAGCAGTAGCAGCAGCGGTAG
GAGGAGCAACGGCAGCAGCATTGAGGTAGCCGAAGAGGCCGCCCAGGGGG
AGACGCTGGATATGGTCGTCCACGTGTTCTGGAACGGCGCCGCAAGGGAT
CGCGCCTACATCGAGGCGTTCCTGCCCGAAAACGGCCGGGGAGGGGCAGG
TTCTTGTGACGAGAGCTGTGGCGGCAAGCCTTTGATCCTTCGCTTGAGTG
TGAGAGTGCCAACGCTTGCGATCGTCGACGCGCAGGCAGCGTCGAAATTC
GCGGAGCGCATGGTGGAGCAAATCGCCATTCTTGTCGTCGAAAACGAAAC
GGTCGGACTCGCTGGGAGAAAAGTAGCGGTAGGCCAACCGCAGCGGCACC
GCGGATACAAGCTGTGGTTGGCCGGGGTCGGTCCGAAATCGGTGGTTTCA
GGGATCCCCTAG
back to top