mRNA_P-fluviatile_contig8.14563.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14563.1
Unique NamemRNA_P-fluviatile_contig8.14563.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:2708085..2710311 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-11_004420.1
Exons4
Model size1365
Cds size1365
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14563.1prot_P-fluviatile_contig8.14563.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 2708085..2710311 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817249.7280982-CDS-P-fluviatile_contig8:2708084..27085881622817249.7280982-CDS-P-fluviatile_contig8:2708084..2708588Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2708085..2708588 -
1693571707.0836196-CDS-P-fluviatile_contig8:2708084..27085881693571707.0836196-CDS-P-fluviatile_contig8:2708084..2708588Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2708085..2708588 -
1622817249.7391257-CDS-P-fluviatile_contig8:2709210..27098721622817249.7391257-CDS-P-fluviatile_contig8:2709210..2709872Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2709211..2709872 -
1693571707.0984492-CDS-P-fluviatile_contig8:2709210..27098721693571707.0984492-CDS-P-fluviatile_contig8:2709210..2709872Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2709211..2709872 -
1622817249.748573-CDS-P-fluviatile_contig8:2709920..27100501622817249.748573-CDS-P-fluviatile_contig8:2709920..2710050Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2709921..2710050 -
1693571707.1097827-CDS-P-fluviatile_contig8:2709920..27100501693571707.1097827-CDS-P-fluviatile_contig8:2709920..2710050Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2709921..2710050 -
1622817249.7626848-CDS-P-fluviatile_contig8:2710242..27103111622817249.7626848-CDS-P-fluviatile_contig8:2710242..2710311Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2710243..2710311 -
1693571707.1232383-CDS-P-fluviatile_contig8:2710242..27103111693571707.1232383-CDS-P-fluviatile_contig8:2710242..2710311Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2710243..2710311 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14563.1

>prot_P-fluviatile_contig8.14563.1 ID=prot_P-fluviatile_contig8.14563.1|Name=mRNA_P-fluviatile_contig8.14563.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=455bp
MSLIEVLCWLREALPLPARAAPKRVLLEHQLLQEHALLRQPWLETSSSAN
PPGYGRTSHTTRRLARPRYYRSSSPGSGDGYTSMSSAPLHMVEELFRKAR
LRRCFVGICQQRGGSENGGQSSVAPKSPPGLVVNRAGIATAQAGDTNEEM
EQGSAPDNEAVFQPEGEFCPRLAVEASLEPRSQHLSDSPRHRDAGEAEDE
RARRQFLLRGFSYTASRQNVLRRDDHLDLGQGGAPVTGGAPCFTVGESRW
AQTGPGDHDGVGLSNAPEGVRLRRANLLRRILHAMRHSARERVREAEDTS
PAPTFPISRGHVSQPTLLPISKGQTRIQNPPVSEPAATEPTGALSNSTPT
SERDFIARTVGTSGDLPVHPREAASKGEAYQAVFKALLRLIPQSPTGEAR
VEDGGGGGVAAAGGGAGRMQAAAVRCGIQCQGYIRALQKGMEVRAPAEKV
IARG*
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mRNA from alignment at P-fluviatile_contig8:2708085..2710311-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14563.1 ID=mRNA_P-fluviatile_contig8.14563.1|Name=mRNA_P-fluviatile_contig8.14563.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2227bp|location=Sequence derived from alignment at P-fluviatile_contig8:2708085..2710311- (Porterinema fluviatile SAG_2381)
ATGTCGCTTATCGAGGTCCTCTGTTGGCTGCGAGAAGCGCTTCCGCTGCC
TGCAAGGGCAGCACCTAAGGTCCGTGGAGCGTACGTATGTAATGATTTGA
GGCACCAGAGATATCTCGTCGAGGAAAGATTGCGAGCCCGAGCTATCGAA
ACGCGTCTCGCAGCACTCGGAGCGAGCAATGGGTAGGATTTAGATCTTAC
CGCGTACATTGCACCGAAGTCTGCTGAGCCCCTCCCCGTCGCCTTGAAAA
CGTGTACGCAGAGGGTTCTCCTTGAACATCAACTCTTGCAGGAGCACGCC
CTTCTCCGGCAACCGTGGTTGGAAACAAGCTCATCAGCCAATCCGCCTGG
ATATGGAAGAACATCACACACCACACGAAGACTTGCGCGACGTTGCCTTT
GCCTTCAACAACAAGGAAAATCACGTCGGTGCAAATCAGCACGGTACTAC
CGCAGTAGCAGTCCTGGCAGCGGCGACGGGTACACCAGCATGTCATCTGC
GCCTTTGCACATGGTGGAAGAATTGTTTCGCAAGGCTAGGCTCAGGCGCT
GCTTCGTGGGCATCTGCCAGCAACGAGGTGGCAGCGAGAACGGAGGGCAG
TCTTCGGTAGCACCAAAGTCGCCGCCTGGGCTTGTCGTCAATAGAGCAGG
CATTGCCACCGCACAAGCTGGAGACACGAACGAGGAAATGGAGCAGGGAT
CAGCCCCGGATAACGAAGCAGTGTTTCAACCCGAAGGAGAGTTTTGCCCC
AGGCTCGCCGTAGAAGCTAGCCTAGAGCCCCGCTCACAACACCTCTCGGA
CTCGCCACGACATCGCGACGCGGGTGAGGCTGAGGACGAACGAGCGCGGC
GTCAGTTCCTATTGCGGGGCTTTTCTTACACCGCGAGTCGCCAAAACGTC
CTCAGGCGGGATGATCACTTGGACCTGGGGCAGGGAGGTGCACCTGTAAC
GGGAGGCGCTCCGTGTTTCACGGTCGGTGAGAGCAGATGGGCACAGACGG
GTCCAGGTGACCATGATGGCGTTGGGCTCAGCAACGCCCCTGAAGGAGTC
AGACTGCGGCGCGCCAATCTACTCAGGCGAATTCTCCATGCAATGAGGCA
CGTCTTGGCAGAGATGTTTAGGCTTTCTCTTTATGTGGTTCAAACGTTGT
GGGTCTCGGCGATATTGTTTCAAAACTGTTTGCGTTTGTAGCAAGGGATG
TAGACAAGCACATCATGAATCTTGTTTGCACAGGAAAGCCCTAGCTGTCT
CACGACAGTCACAGCGAAGCAACACACGATTCTGGCCGTGCGAAACCAGC
ACGAGAGAAGAGTCGCGCTTACGCAGATAGACTCCAGGATCGAGTACAAG
CCCGCCTTGCTGTGAACAGTTTTGAGCGCTGGTGAGTTTTTGCAACCGTT
GATCGAATGCACAGCCTAATCTCCCACAATGAAGGTTCGCTGGCCGTGCT
CGAACTAGGGAGATGCGCCGAGCACAGAAAGATGGCCGCACAATATGCAG
CCATGCTTTTCCTCCGCGAGAGATATCAGGGTTCGACAATTGTCAACCTG
TAAGGGAAACTGAGCGCCAAACGCATTGCATGTAACAAGTTTGGACGACA
AGTACCGTGTGCGCATTTCAATTTGCCGCTGCCCAATATCCAACCTCGTT
CTTTGACGCGTCCAATCGTAAGGCAAGAACCGCGAATTTTTCTCTCTCTC
TGCTTCCGCAACACCACAGAGAGTCCGCTAGGGAAAGAGTTCGGGAAGCA
GAAGACACGTCCCCAGCTCCGACATTCCCTATATCCCGAGGTCACGTCTC
ACAGCCCACCCTGCTGCCGATTTCCAAAGGGCAGACGCGCATTCAAAACC
CGCCGGTGTCAGAACCAGCCGCGACGGAGCCAACCGGCGCGCTATCAAAC
TCTACGCCGACATCTGAGCGAGACTTTATCGCCAGAACAGTAGGCACAAG
CGGAGATCTGCCCGTCCACCCGCGAGAAGCCGCGAGCAAAGGGGAGGCAT
ACCAAGCTGTTTTTAAGGCATTGCTTAGGCTAATCCCGCAGTCTCCCACC
GGAGAAGCACGGGTTGAAGACGGCGGCGGTGGCGGCGTCGCTGCGGCTGG
CGGCGGGGCAGGAAGGATGCAAGCGGCGGCTGTGCGCTGCGGGATACAGT
GCCAGGGGTACATACGCGCTCTGCAGAAGGGGATGGAGGTGCGCGCCCCT
GCCGAGAAAGTCATTGCCAGAGGCTGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:2708085..2710311-

>mRNA_P-fluviatile_contig8.14563.1 ID=mRNA_P-fluviatile_contig8.14563.1|Name=mRNA_P-fluviatile_contig8.14563.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2730bp|location=Sequence derived from alignment at P-fluviatile_contig8:2708085..2710311- (Porterinema fluviatile SAG_2381)
ATGTCGCTTATCGAGGTCCTCTGTTGGCTGCGAGAAGCGCTTCCGCTGCC
TGCAAGGGCAGCACCTAAGATGTCGCTTATCGAGGTCCTCTGTTGGCTGC
GAGAAGCGCTTCCGCTGCCTGCAAGGGCAGCACCTAAGAGGGTTCTCCTT
GAACATCAACTCTTGCAGGAGCACGCCCTTCTCCGGCAACCGTGGTTGGA
AACAAGCTCATCAGCCAATCCGCCTGGATATGGAAGAACATCACACACCA
CACGAAGACTTGCGCGACAGGGTTCTCCTTGAACATCAACTCTTGCAGGA
GCACGCCCTTCTCCGGCAACCGTGGTTGGAAACAAGCTCATCAGCCAATC
CGCCTGGATATGGAAGAACATCACACACCACACGAAGACTTGCGCGACCA
CGGTACTACCGCAGTAGCAGTCCTGGCAGCGGCGACGGGTACACCAGCAT
GTCATCTGCGCCTTTGCACATGGTGGAAGAATTGTTTCGCAAGGCTAGGC
TCAGGCGCTGCTTCGTGGGCATCTGCCAGCAACGAGGTGGCAGCGAGAAC
GGAGGGCAGTCTTCGGTAGCACCAAAGTCGCCGCCTGGGCTTGTCGTCAA
TAGAGCAGGCATTGCCACCGCACAAGCTGGAGACACGAACGAGGAAATGG
AGCAGGGATCAGCCCCGGATAACGAAGCAGTGTTTCAACCCGAAGGAGAG
TTTTGCCCCAGGCTCGCCGTAGAAGCTAGCCTAGAGCCCCGCTCACAACA
CCTCTCGGACTCGCCACGACATCGCGACGCGGGTGAGGCTGAGGACGAAC
GAGCGCGGCGTCAGTTCCTATTGCGGGGCTTTTCTTACACCGCGAGTCGC
CAAAACGTCCTCAGGCGGGATGATCACTTGGACCTGGGGCAGGGAGGTGC
ACCTGTAACGGGAGGCGCTCCGTGTTTCACGGTCGGTGAGAGCAGATGGG
CACAGACGGGTCCAGGTGACCATGATGGCGTTGGGCTCAGCAACGCCCCT
GAAGGAGTCAGACTGCGGCGCGCCAATCTACTCAGGCGAATTCTCCATGC
AATGAGGCACCACGGTACTACCGCAGTAGCAGTCCTGGCAGCGGCGACGG
GTACACCAGCATGTCATCTGCGCCTTTGCACATGGTGGAAGAATTGTTTC
GCAAGGCTAGGCTCAGGCGCTGCTTCGTGGGCATCTGCCAGCAACGAGGT
GGCAGCGAGAACGGAGGGCAGTCTTCGGTAGCACCAAAGTCGCCGCCTGG
GCTTGTCGTCAATAGAGCAGGCATTGCCACCGCACAAGCTGGAGACACGA
ACGAGGAAATGGAGCAGGGATCAGCCCCGGATAACGAAGCAGTGTTTCAA
CCCGAAGGAGAGTTTTGCCCCAGGCTCGCCGTAGAAGCTAGCCTAGAGCC
CCGCTCACAACACCTCTCGGACTCGCCACGACATCGCGACGCGGGTGAGG
CTGAGGACGAACGAGCGCGGCGTCAGTTCCTATTGCGGGGCTTTTCTTAC
ACCGCGAGTCGCCAAAACGTCCTCAGGCGGGATGATCACTTGGACCTGGG
GCAGGGAGGTGCACCTGTAACGGGAGGCGCTCCGTGTTTCACGGTCGGTG
AGAGCAGATGGGCACAGACGGGTCCAGGTGACCATGATGGCGTTGGGCTC
AGCAACGCCCCTGAAGGAGTCAGACTGCGGCGCGCCAATCTACTCAGGCG
AATTCTCCATGCAATGAGGCACTCCGCTAGGGAAAGAGTTCGGGAAGCAG
AAGACACGTCCCCAGCTCCGACATTCCCTATATCCCGAGGTCACGTCTCA
CAGCCCACCCTGCTGCCGATTTCCAAAGGGCAGACGCGCATTCAAAACCC
GCCGGTGTCAGAACCAGCCGCGACGGAGCCAACCGGCGCGCTATCAAACT
CTACGCCGACATCTGAGCGAGACTTTATCGCCAGAACAGTAGGCACAAGC
GGAGATCTGCCCGTCCACCCGCGAGAAGCCGCGAGCAAAGGGGAGGCATA
CCAAGCTGTTTTTAAGGCATTGCTTAGGCTAATCCCGCAGTCTCCCACCG
GAGAAGCACGGGTTGAAGACGGCGGCGGTGGCGGCGTCGCTGCGGCTGGC
GGCGGGGCAGGAAGGATGCAAGCGGCGGCTGTGCGCTGCGGGATACAGTG
CCAGGGGTACATACGCGCTCTGCAGAAGGGGATGGAGGTGCGCGCCCCTG
CCGAGAAAGTCATTGCCAGAGGCTGATCCGCTAGGGAAAGAGTTCGGGAA
GCAGAAGACACGTCCCCAGCTCCGACATTCCCTATATCCCGAGGTCACGT
CTCACAGCCCACCCTGCTGCCGATTTCCAAAGGGCAGACGCGCATTCAAA
ACCCGCCGGTGTCAGAACCAGCCGCGACGGAGCCAACCGGCGCGCTATCA
AACTCTACGCCGACATCTGAGCGAGACTTTATCGCCAGAACAGTAGGCAC
AAGCGGAGATCTGCCCGTCCACCCGCGAGAAGCCGCGAGCAAAGGGGAGG
CATACCAAGCTGTTTTTAAGGCATTGCTTAGGCTAATCCCGCAGTCTCCC
ACCGGAGAAGCACGGGTTGAAGACGGCGGCGGTGGCGGCGTCGCTGCGGC
TGGCGGCGGGGCAGGAAGGATGCAAGCGGCGGCTGTGCGCTGCGGGATAC
AGTGCCAGGGGTACATACGCGCTCTGCAGAAGGGGATGGAGGTGCGCGCC
CCTGCCGAGAAAGTCATTGCCAGAGGCTGA
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