mRNA_P-fluviatile_contig8.14560.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14560.1 vs. uniprot
Match: A0A6H5K7R5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R5_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 3.400e-13 Identity = 88/160 (55.00%), Postives = 99/160 (61.88%), Query Frame = 2
Query: 11 VLWTVCAVSGFVSFSEAFLQPASLVPS--TRPAS----SRSSTLPRGTAAPSRRGRMSASPVTKDXXXXXXXXXXXXXXXXXXXXXXXXMNPFIAAAVGMALLSSGPSATLAAQAARGTVFPAGAXXXXXXXXXXXXXXXXTAGDIGLKDLLGEYNSGRD 472
V WTVCAVSGF S S+AFLQP+S++ S TR A+ SR+ R +AA G ASP K NPF+ AAVGMALLS+ P+ATLAAQ+AR V P G XXXXXXXXXXXXXXXXTAGD LKDLLGEYNS RD
Sbjct: 4 VFWTVCAVSGFASVSQAFLQPSSIIVSSATRRAAADTRSRNDVPCRMSAADESDG---ASPALK--------------------------NPFLVAAVGMALLSTDPAATLAAQSAREAVLP-GXXXXXXXXXXXXXXXXXTAGDPMLKDLLGEYNSARD 133 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14560.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14560.1 >prot_P-fluviatile_contig8.14560.1 ID=prot_P-fluviatile_contig8.14560.1|Name=mRNA_P-fluviatile_contig8.14560.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=620bp MSASPVTKDDNNDDHHGDGIDDEKYGSPPPTTSMNPFIAAAVGMALLSSGback to top mRNA from alignment at P-fluviatile_contig8:2652241..2662833+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14560.1 ID=mRNA_P-fluviatile_contig8.14560.1|Name=mRNA_P-fluviatile_contig8.14560.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10593bp|location=Sequence derived from alignment at P-fluviatile_contig8:2652241..2662833+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:2652241..2662833+ >mRNA_P-fluviatile_contig8.14560.1 ID=mRNA_P-fluviatile_contig8.14560.1|Name=mRNA_P-fluviatile_contig8.14560.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3720bp|location=Sequence derived from alignment at P-fluviatile_contig8:2652241..2662833+ (Porterinema fluviatile SAG_2381)back to top |