mRNA_P-fluviatile_contig8.14541.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14541.1 vs. uniprot
Match: A0A6H5K4Z5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4Z5_9PHAE) HSP 1 Score: 546 bits (1408), Expect = 2.880e-172 Identity = 517/1035 (49.95%), Postives = 610/1035 (58.94%), Query Frame = 3
Query: 591 NLQLIPCQTCAGSLSYAHCLTAKSRDGECHVPRLKAVKDRAHPRRSKAVLLPGQKQLPPGAVEGSTEDLPLSPENLALRFRVPCELCTTLAMCSNNNHPQRERTLAEIVGDYADGKTKGESCPEVQTKGHHHLYHLNHPEGVGRRVKEEARSKPLGSKGGGEGEGATAEEADXXXXXXXXXXXXXXXXXVAGAVSAPG--QKGFIRGHRVCVVEGQRVMMPRMVSVCDGVVLSLCLAPVLISSELRADVPGDFAVSAETGTMSKGGYHFARLAKITIANVLKLRALRDVISWKHNATKDVHPTVAAKVLNIWEKHHPAESKVLDTMLQDRKADKDFSFRVPDGGPASTFKASDLRTLYARRSAEAAALINSFTEEQINSTTSPGGEHFYEHELPDGYHGAAATVVSVKGEG---------------------------------GRQGFPRARVGGARSKGAAAAXXXXXXXXXXXXXXXXXXXXXXXXKSRRRSRVREVVASDGKCYSLPLCIREKASKLNLYVSLRTHRVNGAPLFVDTTAENAPLQKPYGRADITRENLLALRAVRDLMYRNPVLHPIVAADAFEIWESITGSEAALLPDADKVEVTGAATLDG-VIPRAKFTAGELRKLRGAARRAALDVVLGSQLSDPAVMAGSLEEVAPTAAVT----------------------------------------AAATGARAGVL-----------------------------------------ERPGDGSSGDGRGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTGGTTPE-----------VSRAAKRNRPSSRTGVDGGGVYVGWLGSGQAGP-------GGTGILKGKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSESRACVRRESWLQAVHENDWHQKRELERLRKEKAKVKEAHLARSVELMKWMVDEQSGRHEGTSGPPPAR 3290
+LQLIPC CA S S AHCLTA+ R+G+ H PRL+ VK +A +RSKA+LLPG+++ P GA +GS EDLPL+PEN++L FRVPCELCTTLAMC+N +H + RTLA++V T G V+ G HH + G VKEE LG +GG GA A XXXXXXXXXXXXXXXX AP Q+ RV VEG+RVMMP M+S+CDGVVLSL LAP+ I SE R DVPGD ++ G MS+GGYHFAR+ +TIANVLKLRALRDVISWKHN TK +H VAAKVL++WE+HHP E++ LD +L+D DKD F+V + GP + +KAS+LR +YARR++EA LI F +EQ+ ++T+ GGE FY +L + + G++ + R V G XXXXXXXXXXXXXX SRV+EVVASDGKCY+LPLC+REK KLNLYVSLR HRV+G LF D +AENAPLQ+PYGRADITRENLLALRAVRDL+YR+P +HPI+AADAFEIWE++ +E PD D V ++GA T D +P+ KFT GELR+LRG RR A+D +L L P+VMAG LEE PT A A G E P S S XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T G T V R +KR P R +G G +G A P +KG+R+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S +S A VRR+SWLQAVHEND H K ELERLRKEK +VKEAHLAR+VELMKWMV EQSG H G++GPPP R
Sbjct: 132 HLQLIPCSACAASASLAHCLTARDRNGDHHTPRLRVVKGKALRKRSKALLLPGEREPPLGAEDGSMEDLPLTPENMSLLFRVPCELCTTLAMCANRHHSENVRTLADMVK--VPPGTGG-----VENTGSHHGAGAHGSIGS---VKEEE----LGGEGGERDGGAVGVAAXXXXXXXXXXXXXXXXX-------APRTLQRRTRARRRVLEVEGKRVMMPNMISICDGVVLSLYLAPISIFSERREDVPGDLEINESMGNMSRGGYHFARMPSVTIANVLKLRALRDVISWKHNGTKTIHRIVAAKVLSVWERHHPGEARQLDKLLRDGDVDKDLIFQVGNAGPTAVYKASELRLVYARRASEAPLLIAGFKKEQLEASTAEGGEQFYADDLDEAGEEEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCSVPTGKRAYKRKSVDGGSP------------LSPPXXXXXXXXXXXXXXXXXXXSRVKEVVASDGKCYTLPLCVREKGKKLNLYVSLRAHRVDGDSLFTDPSAENAPLQRPYGRADITRENLLALRAVRDLVYRSPTVHPIIAADAFEIWENVHAAETPR-PDDDTVVISGARTADSNFVPQEKFTVGELRRLRGVERRKAVDDLLDGMLRSPSVMAGELEEATPTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKATPLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAHEMPVTAVS------SCSXXXXXXXXXXXXXXSGRAATRASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSGATGRPAVGGXXXAAVVGRGSKRLSPG-RVEEEGWGAATD---AGAADPYPFYRQGKKPADVKGRRKGDWRMDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------SPDSLAGVRRDSWLQAVHENDRHLKLELERLRKEKTRVKEAHLARNVELMKWMVQEQSGMHGGSAGPPPRR 1115
BLAST of mRNA_P-fluviatile_contig8.14541.1 vs. uniprot
Match: D8LIL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIL9_ECTSI) HSP 1 Score: 377 bits (967), Expect = 4.680e-114 Identity = 213/399 (53.38%), Postives = 259/399 (64.91%), Query Frame = 3
Query: 1362 GTMSKGGYHFARLAKITIANVLKLRALRDVISWKHNATKDVHPTVAAKVLNIWEKHHPAESKVLDTMLQDRKADKDFSFRVPDGGPASTFKASDLRTLYARRSAEAAALINSFTEEQINSTTSPGGEHFY--------EHELPDGYHGAAATVVSVKGEGGRQGFPRARVGGARSKGAAAAXXXXXXXXXXXXXXXXXXXXXXXXKSRRR-----------------SRVREVVASDGKCYSLPLCIREKASKLNLYVSLRTHRVNGAPLFVDTTAENAPLQKPYGRADITRENLLALRAVRDLMYRNPVLHPIVAADAFEIWESITGSEAALLPDADKVEVTGAATLDG-VIPRAKFTAGELRKLRGAARRAALDVVLGSQLSDPAVMAGSLEEVAPT 2480
G MS+GGYHFAR+ +TIANVLKLRALRDVISWKHN TK VH VAAKVL++WE+HHP E+K L+ +L+D DKD F+V + GP + +KAS+LRT+YARR+ EA LI FTEEQ+ ++T+ GGE FY E E+ D G EG G + + + S AAA XXXX SRV+EVVASDGKCY+LPLC+REK KLNLYVSLR HRV+G LF D +AENAPLQ+PYGRADITRENLLALRAVRDL+YR+P +HPI+AADAFEIWE++ +E PD D V ++GA T DG +P+ KFT GELR+LRG RR A+D +L L P+VMAG LEE PT
Sbjct: 2 GNMSRGGYHFARMPAVTIANVLKLRALRDVISWKHNETKTVHRIVAAKVLSVWERHHPGEAKQLNELLRDGDVDKDLIFQVGNAGPTAVYKASELRTVYARRATEAPLLIAGFTEEQLKASTAEGGEQFYADELEEAGEEEVSDAEDGEEKAAADAVAEG--MGRGKRALNSSSSDAAAAGRGDYSIPTGKRAYRRRTVVGXXXXXXXXXXXXXXXXXXXXXXXXXXSRVKEVVASDGKCYTLPLCVREKGKKLNLYVSLRAHRVDGDSLFTDPSAENAPLQRPYGRADITRENLLALRAVRDLVYRSPTVHPIIAADAFEIWENVHAAETPR-PDDDTVVISGARTADGNFVPQEKFTVGELRRLRGVERRKAVDDLLDGMLRSPSVMAGELEEATPT 397 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14541.1 >prot_P-fluviatile_contig8.14541.1 ID=prot_P-fluviatile_contig8.14541.1|Name=mRNA_P-fluviatile_contig8.14541.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1018bp MAGYPSNISSDNYSSGDEIGKSASPSAASLKNTRPPAHSDSSESESDVREback to top mRNA from alignment at P-fluviatile_contig8:2473280..2483643+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14541.1 ID=mRNA_P-fluviatile_contig8.14541.1|Name=mRNA_P-fluviatile_contig8.14541.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10364bp|location=Sequence derived from alignment at P-fluviatile_contig8:2473280..2483643+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:2473280..2483643+ >mRNA_P-fluviatile_contig8.14541.1 ID=mRNA_P-fluviatile_contig8.14541.1|Name=mRNA_P-fluviatile_contig8.14541.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6108bp|location=Sequence derived from alignment at P-fluviatile_contig8:2473280..2483643+ (Porterinema fluviatile SAG_2381)back to top |