mRNA_P-fluviatile_contig8.14538.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14538.1 vs. uniprot
Match: A0A6H5K275_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K275_9PHAE) HSP 1 Score: 135 bits (339), Expect = 2.040e-32 Identity = 62/87 (71.26%), Postives = 75/87 (86.21%), Query Frame = 1
Query: 388 SSDDYTKAKAKHDDKLVVIKFYDKFCKACDEVRPRFEDLSRSLPQEEAVFFDLEFSENKELCRQLGIRRLPTVQIYDGAAGRLGKKP 648
S+DDY A A+H+DKLVVIKFYD+FC+ACDE+RPR+EDLSRS P+E+AVFFD+EFS K+LC+QLGI RLPTVQIYDG GR+ P
Sbjct: 84 SNDDYVSAMAQHEDKLVVIKFYDQFCRACDEIRPRYEDLSRSQPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLP 170
BLAST of mRNA_P-fluviatile_contig8.14538.1 vs. uniprot
Match: A0A835YYQ5_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYQ5_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 4.100e-16 Identity = 41/86 (47.67%), Postives = 59/86 (68.60%), Query Frame = 1
Query: 391 SDDYTKAKAKHDDKLVVIKFYDKFCKACDEVRPRFEDLSRSLPQEEAVFFDLEFSENKELCRQLGIRRLPTVQIYDGAAGRLGKKP 648
+D + +A A + D+ VVIKFYD FC+AC + P+FE +++ P F+++EF ENK LC+ LGI LPT+QIY GAAG++ P
Sbjct: 74 TDGFLEAMASNADRPVVIKFYDTFCRACKAIAPKFERMAQENPG--VSFYEVEFRENKPLCKSLGITMLPTIQIYRGAAGKVASMP 157
BLAST of mRNA_P-fluviatile_contig8.14538.1 vs. uniprot
Match: A0A835YVS6_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS6_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 3.870e-15 Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 400 YTKAKAKHDDKLVVIKFYDKFCKACDEVRPRFEDLSRSLPQEEAVFFDLEFSENKELCRQLGIRRLPTVQIYDGAAGRLGKKP 648
+ +A A + DK VV+KFYD FC+AC V P+FE +++ P F+ +EF ++K LC+ LGI LPT+QIY G+AG++ P
Sbjct: 30 FLEAMAANGDKPVVLKFYDTFCRACKAVAPKFERMAQENPG--VAFYQVEFRQDKPLCKSLGITMLPTIQIYQGSAGKIADMP 110
BLAST of mRNA_P-fluviatile_contig8.14538.1 vs. uniprot
Match: F0YB20_AURAN (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB20_AURAN) HSP 1 Score: 81.6 bits (200), Expect = 5.100e-15 Identity = 34/69 (49.28%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 424 DDKLVVIKFYDKFCKACDEVRPRFEDLSRSLPQEEAVFFDLEFSENKELCRQLGIRRLPTVQIYDGAAG 630
DD+LV +KFY +C+AC + PRFE L++ +E FF++EF+ NKELCR+L I++LP VQ + G+ G
Sbjct: 19 DDRLVAVKFYASWCRACKSIAPRFERLAKEFAGDEVQFFEIEFAANKELCRRLNIKKLPCVQYFRGSLG 87
BLAST of mRNA_P-fluviatile_contig8.14538.1 vs. uniprot
Match: A0A7S4A7N2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7N2_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 2.190e-12 Identity = 36/70 (51.43%), Postives = 51/70 (72.86%), Query Frame = 1
Query: 427 DKLVVIKFYDKFCKACDEVRPRFEDLSRSLPQEEAVFFDLEFSENKELCRQLGIRRLPTVQIYDGAAGRL 636
DK+V IKFY +C+AC + PRFE L++ EEA F+++EFS NK+LCR+L I++LP VQ + GA G +
Sbjct: 131 DKVVAIKFYAGWCRACKTIAPRFERLAKEFG-EEAAFYEIEFSANKDLCRRLDIKKLPCVQFFRGAEGHV 199
BLAST of mRNA_P-fluviatile_contig8.14538.1 vs. uniprot
Match: A0A7S1TN71_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TN71_9RHOD) HSP 1 Score: 73.9 bits (180), Expect = 2.990e-11 Identity = 33/80 (41.25%), Postives = 53/80 (66.25%), Query Frame = 1
Query: 397 DYTKAKAKHDDKLVVIKFYDKFCKACDEVRPRFEDLSRSLPQEEAVFFDLEFSENKELCRQLGIRRLPTVQIYDGAAGRL 636
DY A ++LVVIKFY +C++C + P+ + L+R P E +F +++F EN ELCR++G++ +P YDG+AGR+
Sbjct: 90 DYLAALECSSERLVVIKFYAPWCRSCKAMEPKVKRLAREYP--EILFCEVDFQENHELCRRIGVKSIPAFHFYDGSAGRV 167
BLAST of mRNA_P-fluviatile_contig8.14538.1 vs. uniprot
Match: A0A8J5X1A3_DIALT (Thioredoxin domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X1A3_DIALT) HSP 1 Score: 66.6 bits (161), Expect = 3.390e-9 Identity = 31/81 (38.27%), Postives = 53/81 (65.43%), Query Frame = 1
Query: 424 DDKLVVIKFYDKFCKACDEVRPRFEDLSRSLPQEEAVFFDLEFSENKELCRQLGIRRLPTVQIYDGAAGRLGKKPECRSYS 666
D++LVV+K+Y +C+AC + P+ E ++R+ P F++LEF NK LC++LGI+ LP ++I+ G G+ + S+S
Sbjct: 26 DEQLVVVKYYASWCRACKALGPKVEKIARNHPN--VRFYELEFEANKALCKELGIKVLPWIEIFKG-----GRSTKLESFS 99
BLAST of mRNA_P-fluviatile_contig8.14538.1 vs. uniprot
Match: A0A7S0SEU0_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SEU0_9CHLO) HSP 1 Score: 65.1 bits (157), Expect = 2.320e-8 Identity = 27/73 (36.99%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 424 DDKLVVIKFYDKFCKACDEVRPRFEDLSRSLPQEEAVFFDLEFSENKELCRQLGIRRLPTVQIYDGAAGRLGK 642
+D LVV+ FY ++C AC + P+ ++ S +F +EF +NKE+CR +G++ LP +Y G AGR+ +
Sbjct: 79 EDTLVVVDFYARWCGACRALHPKLCKIAASDAHSNVIFLKVEFDDNKEMCRNMGVKILPYFHMYKGKAGRVAE 151
BLAST of mRNA_P-fluviatile_contig8.14538.1 vs. uniprot
Match: A0A7S1TB32_9RHOD (Hypothetical protein (Fragment) n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TB32_9RHOD) HSP 1 Score: 63.5 bits (153), Expect = 3.740e-8 Identity = 28/68 (41.18%), Postives = 46/68 (67.65%), Query Frame = 1
Query: 433 LVVIKFYDKFCKACDEVRPRFEDLSRSLPQEEAVFFDLEFSENKELCRQLGIRRLPTVQIYDGAAGRL 636
L+V+KF ++C++C V + + L+R PQ F +++F +N+ELCR+LG+ LPT Q Y G AG++
Sbjct: 65 LLVLKFKARWCRSCQGVDAKVKRLAREFPQ--VRFCEMDFDDNRELCRRLGVTSLPTFQFYMGQAGKV 130
BLAST of mRNA_P-fluviatile_contig8.14538.1 vs. uniprot
Match: A0A7S3TUC7_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TUC7_9SPIT) HSP 1 Score: 62.4 bits (150), Expect = 1.010e-7 Identity = 28/75 (37.33%), Postives = 53/75 (70.67%), Query Frame = 1
Query: 412 KAKHDDKLVVIKFYDKFCKACDEVRPRFEDLSRSLPQEEAVFFDLEFSENKELCRQLGIRRLPTVQIYDGAAGRL 636
+AK ++++VVIKFY +C+AC + P++ +++ P+ E F ++ + NK+LC++LGI+ LP ++I G AG++
Sbjct: 31 QAKAENRVVVIKFYASWCRACKAMGPKYVKVAQDWPELE--FCEMLYDNNKKLCKELGIKVLPYIEIVAGNAGKV 103 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14538.1 >prot_P-fluviatile_contig8.14538.1 ID=prot_P-fluviatile_contig8.14538.1|Name=mRNA_P-fluviatile_contig8.14538.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=194bp MRSAAAVTVIGALCVSCAGAFVIPVARPSISSATSSTASRRGPVRRFSGPback to top mRNA from alignment at P-fluviatile_contig8:2455002..2459452+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14538.1 ID=mRNA_P-fluviatile_contig8.14538.1|Name=mRNA_P-fluviatile_contig8.14538.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4451bp|location=Sequence derived from alignment at P-fluviatile_contig8:2455002..2459452+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:2455002..2459452+ >mRNA_P-fluviatile_contig8.14538.1 ID=mRNA_P-fluviatile_contig8.14538.1|Name=mRNA_P-fluviatile_contig8.14538.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1164bp|location=Sequence derived from alignment at P-fluviatile_contig8:2455002..2459452+ (Porterinema fluviatile SAG_2381)back to top |