mRNA_P-fluviatile_contig8.14532.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14532.1
Unique NamemRNA_P-fluviatile_contig8.14532.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig8.14532.1 vs. uniprot
Match: D7G636_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G636_ECTSI)

HSP 1 Score: 461 bits (1185), Expect = 2.390e-156
Identity = 244/311 (78.46%), Postives = 271/311 (87.14%), Query Frame = 1
Query:    1 MSRRRKPGAKSLDVIQRLQQRVSEGEFYEALQLYKTSYSRLKAQMKLDDAEELLTAGAIAMSRENELNAATELGLLVVTSFEENSREVDEVRLSQLKRIALAMTPGVEMSAFLKRAIRWTRRSKNAAAYELRLIMAKSAMTTGNLAEAARYFAVSGCPTEYAALVKKWATMGYPGERDLFVCRAALHTLSCGRTEDAAVLFDTCATSMLEEDLASSAGGLSS--VQSLLESPLCHFTRFVIELCQMKQLAGGAPSGEMVAAFGKLRAAYRISIDRDRNLDELLDRIGDVHLGIKRPQAGGLMGMLGELIGG 927
            MSRRRKPG  SLDV+QRLQQRVSEGEFYEALQLYKTSYSRLKAQ +LDDAEELLTAGAIAMS+ENELNAATELGLL+VTSFEEN REVDE RLSQLKR+A+AMTPGVEMS FLKRAIRWTR +K  AA+ELRLIMA+SA+TTGNLAEAARYFAVSGCPTEY+ALVK+WA  GYPGE DLF+CRA LHTLS  RTEDA VL D CA+ +L ED ASS G  +S   Q++LESPL HFTRFV+ELCQ+K LAG +PS EM AAF KLR  YR S++RD NLD+LL+RIGDVH GIK PQ GGLMGMLG+L+GG
Sbjct:    1 MSRRRKPGGNSLDVVQRLQQRVSEGEFYEALQLYKTSYSRLKAQGRLDDAEELLTAGAIAMSKENELNAATELGLLIVTSFEENGREVDEARLSQLKRVAVAMTPGVEMSEFLKRAIRWTRHTKTEAAFELRLIMARSAVTTGNLAEAARYFAVSGCPTEYSALVKQWAAKGYPGETDLFICRAVLHTLSYDRTEDAGVLLDACASWVLGEDAASSPGSEASSGAQAVLESPLWHFTRFVVELCQVKSLAG-SPSQEMAAAFNKLREVYRASLERDVNLDDLLNRIGDVHFGIKPPQPGGLMGMLGQLMGG 310          
BLAST of mRNA_P-fluviatile_contig8.14532.1 vs. uniprot
Match: A9RVM5_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RVM5_PHYPA)

HSP 1 Score: 117 bits (293), Expect = 2.860e-25
Identity = 101/329 (30.70%), Postives = 156/329 (47.42%), Query Frame = 1
Query:   43 IQRLQQRVSEGEFYEALQLYKTSYSRLKAQMKLDDAEELLTAGAIAMSRENELNAATELGLLVVTSFEENSREVDEVRLSQLKRIALAMTP-----------------GVEMS--------------AFLKRAIRWTRRSKN--AAAYELRLIMAKSAMTTGNLAE---AARYFAVSGCPTEYAALVKKWATMGYPGERDLFVCRAALHTLSCGRTEDAAVLFDTCATSMLEEDLASSAGGLSSVQSLLESPLCHFTRFVIELCQMKQLAGGAPSGEMVAAFGKLRAAYRISIDRDRNLDELLDRIGDVHLGIKRPQAGGLMGMLGELI 921
            +++L++RV EG +YEA Q+YKT +SR     K ++A ELL +GA+AM    E+   TELG+L++ +F       D   L Q++ I  A                    GVE S              +FL+ A++W+  +      A EL  ++ +   T     E   A+++F     P  +A +V +     YPGE DL V RA L  LS G   DA  L+D+     + + L+ S+      Q L ++PL HF +F++   +   L            F  LR  Y+ S+DRD +LDE LD IG+    ++R    G+ GMLG+ +
Sbjct:   14 LEKLEKRVHEGNYYEAQQMYKTIHSRYMHAKKYNEAIELLNSGAVAMLNHGEVTCGTELGVLLIQTFNVAKLPFDSSTLDQIRTIYNAYPRTAGTRQEKSSSNDTSNLGVESSEAAVIAKTRVEGCTSFLRSALKWSIETGGFPRGAPELHDMLGEYIWTESPHPETMKASQHFVRGNQPETFAKVVVECMDKCYPGEADLVVARAVLLYLSLGNLRDANRLWDS-----VRQRLSDSS------QELPDTPLLHFIKFLLLTLERDALP----------LFKMLRQKYKPSLDRDTSLDEYLDEIGERFFNLQR--RSGVQGMLGDFM 319          
BLAST of mRNA_P-fluviatile_contig8.14532.1 vs. uniprot
Match: A0A8K1CSY7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSY7_PYTOL)

HSP 1 Score: 113 bits (282), Expect = 6.430e-24
Identity = 88/308 (28.57%), Postives = 158/308 (51.30%), Query Frame = 1
Query:   37 DVIQRLQQRVSEGEFYEALQLYKTSYSR-LKAQMKL---DDAEELLTAGAIAMSRENELNAATELGLLVVTSFEENSREVDEVRLSQLKRIALAMTPGVEMSA----FLKRAIRW--TRRSKNAAAYELRLIMAKSAMTTGNLAEAARYFAVSGCPTEYAALVKKWATMGYPGERDLFVCRAALHTLSCGRTEDAAVLFDTCATSMLEEDLASSAGGLSSVQSLLESPLCHFTRFVIELCQMKQLAGGAPSGEMVAAFGKLRAAYRISIDRDRNLDELLDRIGDVHLGIKRPQAGGLMGMLGELIGGL 930
            +V ++L++++++G+FY ALQ+YKT + R LK +  +     A +L    A+ + + ++  AA E+G L+V+ + E+  +VDE    ++++I  A     + SA    FLK A++W  T  S+     EL+L++A++    G L  +A++F  +  P E+A ++ +W+  GYP E DL++ R  L  LS     DA  ++D       E    S   G +     L+ PL +F RF++   +   L            F  L+  Y ++++RD  L   +  IG    G++ P++G L  +L    GG+
Sbjct:   29 NVSRKLEEQLAKGDFYGALQMYKTLFMRHLKGEPGVPQQQQAIDLALEAALNLIKHDQNTAAAEMGNLLVSVYTEHHWKVDETSKDRIRKINAAFVTKPQFSADLAVFLKNAVKWSSTEGSRKRGDPELQLLLARAHRQAGELTLSAKHFLHAENPVEFADMLFEWSKQGYPSEYDLYIARVVLQLLSLENLRDANKVYD-------EYTAKSKQAGRN-----LDLPLYNFLRFLLLTLERDALP----------LFQMLQERYALALNRDPALRNYMSAIGQKFYGLQPPRSG-LSSLLEMFAGGM 313          
BLAST of mRNA_P-fluviatile_contig8.14532.1 vs. uniprot
Match: F0WXJ1_9STRA (Uncharacterized protein AlNc14C355G10942 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WXJ1_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.970e-23
Identity = 84/308 (27.27%), Postives = 156/308 (50.65%), Query Frame = 1
Query:   37 DVIQRLQQRVSEGEFYEALQLYKTSYSR-LKAQMKLD---DAEELLTAGAIAMSRENELNAATELGLLVVTSFEENSREVDEVRLSQLKRI--ALAMTPGV--EMSAFLKRAIRWTRR--SKNAAAYELRLIMAKSAMTTGNLAEAARYFAVSGCPTEYAALVKKWATMGYPGERDLFVCRAALHTLSCGRTEDAAVLFDTCATSMLEEDLASSAGGLSSVQSLLESPLCHFTRFVIELCQMKQLAGGAPSGEMVAAFGKLRAAYRISIDRDRNLDELLDRIGDVHLGIKRPQAGGLMGMLGELIGGL 930
            ++ ++L +++  G++Y ALQ+YKT + R LK++  +    ++ EL +  A  + +  + NAA E+  +++T F +   +VDE   + +  I  A A   G   E+++FL+ A++W+    S+     E++L++A++        +AA+++  +  P E+A  +  W+  GYP E DL++ R+ L  L     +DA  LF+T                       LE+PLCHF RF++   +   L            +  L+  Y  ++ RD++ ++ LD+IG+   G++ PQ  GL  +L    GGL
Sbjct:   42 NISRKLDEQLQSGDYYGALQMYKTLFMRTLKSEASVKQPTESIELASDAAKILVKHKQANAAAEMANMMLTVFTDYHCKVDEYTKNLIFSINDAFAAEGGFSKELASFLRNAVKWSAAEGSRKQGHPEIQLLLARAYFKGMEYKQAAKHYLHAEKPEEFAEFLLTWSKEGYPSEFDLYIARSVLQLLCLENLKDANKLFETFQI---------------KANCSLETPLCHFIRFLLRTLERDALP----------LYQLLKDRYAAALTRDKSFEKYLDKIGENFYGVQ-PQRSGLSSLLDLFSGGL 323          
BLAST of mRNA_P-fluviatile_contig8.14532.1 vs. uniprot
Match: W2MP40_PHYPR (Uncharacterized protein n=25 Tax=Phytophthora TaxID=4783 RepID=W2MP40_PHYPR)

HSP 1 Score: 108 bits (270), Expect = 2.630e-22
Identity = 85/309 (27.51%), Postives = 149/309 (48.22%), Query Frame = 1
Query:   37 DVIQRLQQRVSEGEFYEALQLYKTSYSRL-----KAQMKLDDAEELLTAGAIAMSRENELNAATELGLLVVTSFEENSREVDEVRLSQLKRIALAMTPGVEMSA----FLKRAIRWTRR--SKNAAAYELRLIMAKSAMTTGNLAEAARYFAVSGCPTEYAALVKKWATMGYPGERDLFVCRAALHTLSCGRTEDAAVLFDTCATSMLEEDLASSAGGLSSVQSLLESPLCHFTRFVIELCQMKQLAGGAPSGEMVAAFGKLRAAYRISIDRDRNLDELLDRIGDVHLGIKRPQAGGLMGMLGELIGGL 930
            +V ++L+ +++ G+FY ALQ+YKT + RL      +  + D A  L    A+ +   ++  AATE+  L+V+ F +    VD+    ++++I     P  + SA     LK A++W+    ++     EL+L++A++  T G+   A ++F  +  P E A  + +W+T GYP E DL++ RA L  LS     DA  +++                   SV   ++ PL +FTRF++   +   L            F  L+  Y  ++ RD +L   L  IG    G++ P++G L  +L    GG+
Sbjct:   31 NVTKKLEVQLAAGDFYGALQMYKTLFMRLLKGDEPSAEQQDKAVALAQEAALKLIEHDQNTAATEMANLMVSVFSDFHHPVDDAHKQRIRQIDAVFQPKPQFSADLAVVLKNAVKWSAEEGARKRGDPELQLLLARAYRTAGDFTHALKHFLHAETPQELADALFQWSTQGYPSESDLYLARAVLQLLSLENLRDANKVYEAYVAKC------------QSVGRPVDLPLFNFTRFLLLTLERDALP----------LFQMLQERYAPALARDNSLKSYLSVIGQKFYGLQPPRSG-LSSLLEMFSGGM 316          
BLAST of mRNA_P-fluviatile_contig8.14532.1 vs. uniprot
Match: G4ZUB2_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZUB2_PHYSP)

HSP 1 Score: 108 bits (270), Expect = 2.630e-22
Identity = 90/309 (29.13%), Postives = 152/309 (49.19%), Query Frame = 1
Query:   37 DVIQRLQQRVSEGEFYEALQLYKTSYSR-LKAQMKLDDAEELLTA----GAIAMSRENELNAATELGLLVVTSFEENSREVDEVRLSQLKRIALAMTPGVEMSA----FLKRAIRWTRR--SKNAAAYELRLIMAKSAMTTGNLAEAARYFAVSGCPTEYAALVKKWATMGYPGERDLFVCRAALHTLSCGRTEDAAVLFDTCATSMLEEDLASSAGGLSSVQSLLESPLCHFTRFVIELCQMKQLAGGAPSGEMVAAFGKLRAAYRISIDRDRNLDELLDRIGDVHLGIKRPQAGGLMGMLGELIGGL 930
            +V ++L+ R++ G+FY ALQ+YKT + R LK      + +E   A     A+ +   ++  AATE+  L+V+ F +    VD+    +++ +A A  P  + SA    FLK A++W+    ++     EL+L++A++  T G+   A ++F  S  P E A  + +W+T GYP E DL++ RA L  LS     DA  +++             SAG        ++ PL +FTRF++   +   L            F  L+  Y  ++ RD +L   L  IG    G++ P++G L  +L    GG+
Sbjct:   30 NVGKKLELRLAAGDFYGALQMYKTLFMRFLKGDEPSAEQQEKAAALALDAALKLVEHDQNTAATEMANLMVSVFADFHHPVDDAHKQRVRLVAAAFEPKPQFSADLAVFLKNAVKWSAAEGARKRGDPELQLLLARAYRTAGDFTHAMKHFLHSENPQELADALFQWSTQGYPSESDLYLARAVLQLLSLENLRDANKVYEAYVAK------CQSAG------RPVDLPLFNFTRFLLLTLERDALP----------LFQMLQERYTPALARDSSLKSYLSVIGQKFYGLQPPRSG-LSSLLEMFSGGM 315          
BLAST of mRNA_P-fluviatile_contig8.14532.1 vs. uniprot
Match: A0A485LBU1_9STRA (Aste57867_19039 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBU1_9STRA)

HSP 1 Score: 107 bits (267), Expect = 3.770e-22
Identity = 87/297 (29.29%), Postives = 143/297 (48.15%), Query Frame = 1
Query:   40 VIQRLQQRVSEGEFYEALQLYKTSYSRLKAQMKLDDAEELLTAGAIAMSRENELNAATELGLLVVTSFEENSREVDEVRLSQLKRIALAMTPGV--EMSAFLKRAIRW--TRRSKNAAAYELRLIMAKSAMTTGNLAEAARYFAVSGCPTEYAALVKKWATMGYPGERDLFVCRAALHTLSCGRTEDAAVLFDTCATSMLEEDLASSAGGLSSVQSLLESPLCHFTRFVIELCQMKQLAGGAPSGEMVAAFGKLRAAYRISIDRDRNLDELLDRIGDVHLGIKRPQAG--GLMGMLG 912
            V ++L++R+ +G++Y ALQ+YKT YSR  A      A EL    A+ ++   +  AA E+G L++  +  N+  VDE   +++K I+ A       E S FLK+A++W  T  ++     EL+L +A+      +   A  +F  +  P E AA++   A  GY  E DLFV RA L   +     DA V+        L E LA         +  L++PL +F +F++   + +         + +  F  L+  Y  ++ RD +    L  IG  + G++ PQ+    LM M G
Sbjct:   14 VAEKLEERLKQGDYYGALQMYKTLYSRYAAAGDHMKAIELAQTAAVQLANHEQWTAAREMGCLMLDLYGNNAFVVDETNKARVKVISDAFQNKCPKEESEFLKQAVKWSKTHGARQRGDPELQLWLARVYTIEQDFTNANNHFLHAEAPAELAAMLVSHANQGYASEADLFVARAVLQLAALENLRDANVV--------LTEFLA---------KKPLDTPLINFVKFLLRTLEKR---------DALPLFQLLQERYAYALSRDPSFRTFLQLIGQKYYGVQPPQSALSSLMSMFG 284          
BLAST of mRNA_P-fluviatile_contig8.14532.1 vs. uniprot
Match: A0A2R5GE43_9STRA (Golgi to ER traffic protein 4-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GE43_9STRA)

HSP 1 Score: 107 bits (266), Expect = 6.840e-22
Identity = 88/300 (29.33%), Postives = 143/300 (47.67%), Query Frame = 1
Query:   37 DVIQRLQQRVSEGE-FYEALQLYKTSYSRLKAQMKLDDAEELLTAGAIAMSRENELNAATELGLLVVTSFEENSREVDEVRLSQLKRIALAMTP-------GVEMSAFLKRAIRWTRRSKNAAAYE-----LRLIMAKSAMTTGNLAEAARYFAVSGCPTEYAALVKKWATMGYPGERDLFVCRAALHTLSCGRTEDAAVLFDTCATSMLEEDLASSAGGLSSVQS--LLESPLCHFTRFVIELCQMKQLAGGAPSGEMVAAFGKLRAAYRISIDRDRNLDELLDRIGDVHLGIKRPQAG 891
            D  +RL++RV E +  Y ALQ YKT ++R   +     A +L  +G+  + ++  L A TEL LL+V + E    E D    + +  +A A              + FLK  I W++ S +   +E     L  + A + +  G+++ AA ++  +  P E+A  + +W +MGY GERDLF+ RA L  L+    +DA  L+DT               GL +++   L ++PL HF +F++   +           +    F  L   Y+ SI RD N    LDRI +++ GIK  + G
Sbjct:   13 DKARRLEKRVEEDDDAYGALQTYKTFHARANKKEDFVSAVDLCRSGSTILLKKQHLTAGTELALLLVETLESAKIEEDADAKAVVLEVAKAFEEVENKKDAAKNQARFLKACIVWSQLS-HCGNFEKGDPALHRLAAGAKVRMGDISGAATHYLHAREPKEFATFLYQWTSMGYQGERDLFLARAVLQLLALENLKDANTLYDTFV-------------GLLAMKKTPLQDTPLAHFVKFLLRAVEC----------DAYPLFKMLCEKYQPSIQRDANFQMYLDRISEMYFGIKAQKRG 288          
BLAST of mRNA_P-fluviatile_contig8.14532.1 vs. uniprot
Match: A0A3M6VND9_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VND9_9STRA)

HSP 1 Score: 107 bits (266), Expect = 8.840e-22
Identity = 88/309 (28.48%), Postives = 151/309 (48.87%), Query Frame = 1
Query:   37 DVIQRLQQRVSEGEFYEALQLYKTSYSRL-KAQ----MKLDDAEELLTAGAIAMSRENELNAATELGLLVVTSFEENSREVDEVRLSQLKRIALAMTP----GVEMSAFLKRAIRWT--RRSKNAAAYELRLIMAKSAMTTGNLAEAARYFAVSGCPTEYAALVKKWATMGYPGERDLFVCRAALHTLSCGRTEDAAVLFDTCATSMLEEDLASSAGGLSSVQSLLESPLCHFTRFVIELCQMKQLAGGAPSGEMVAAFGKLRAAYRISIDRDRNLDELLDRIGDVHLGIKRPQAGGLMGMLGELIGGL 930
            +V  +L Q++ EG++Y ALQ+YKT + RL K +     + + A  L     I   +  E  AA E+  L+++ F +    VDE    +++ I  A T       ++++FLK A++W+    ++     EL+L++A++  T    + A ++F  +  P E A ++ +W+T+GYP E DL++ RA L  LS     DA  ++D+  T         SAG        ++ PL +FTRF++   +   L            F  L   Y  ++ RD +L   L  IG    G++ P++G L  +L    GG+
Sbjct:   30 NVSNKLNQQLEEGDYYGALQMYKTLFMRLLKGEEPNITQQEKAINLAFNATIDFVKNEENKAAIEMANLMISVFTDYHHPVDEQHKQRIRDIVSAFTLKPKFSTDLASFLKNAVKWSAIEGARKRGDPELQLLLARAYQTAEEFSNAMKHFLHAENPQELAEMLFQWSTLGYPSESDLYLTRAVLQLLSLENLRDANKVYDSYVTK------CKSAG------RPIDLPLFNFTRFLLLTLERDALP----------LFQMLEERYAPALARDASLKSYLSIIGQKFYGLQPPRSG-LSSLLDMFSGGM 315          
BLAST of mRNA_P-fluviatile_contig8.14532.1 vs. uniprot
Match: H3GH30_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH30_PHYRM)

HSP 1 Score: 105 bits (262), Expect = 2.570e-21
Identity = 86/309 (27.83%), Postives = 154/309 (49.84%), Query Frame = 1
Query:   37 DVIQRLQQRVSEGEFYEALQLYKTSYSR-LKAQMKLDDAEE----LLTAGAIAMSRENELNAATELGLLVVTSFEENSREVDEVRLSQLKRIALAMTP----GVEMSAFLKRAIRWTRR--SKNAAAYELRLIMAKSAMTTGNLAEAARYFAVSGCPTEYAALVKKWATMGYPGERDLFVCRAALHTLSCGRTEDAAVLFDTCATSMLEEDLASSAGGLSSVQSLLESPLCHFTRFVIELCQMKQLAGGAPSGEMVAAFGKLRAAYRISIDRDRNLDELLDRIGDVHLGIKRPQAGGLMGMLGELIGGL 930
            +V ++L+ +++ G+FY ALQ+YKT + R LK      + +E    L    A+ +   ++  AA E+G L+++ F +    VDE    +++++A A  P     V+++  LK A++W+    ++     EL+L++A++  T+G+   A ++F  +  P E A +V +W+T GYP E DL++ RA L  LS     DA  +++             SAG        ++ PL +FTRF++   +M                  L+  Y  ++ RD +L   L  IG    G++ P++G L  +L    GG+
Sbjct:   30 NVSKKLELQLAAGDFYGALQMYKTLFMRYLKGDEPSTEQQEKAATLALDAALQLIAHDQNTAAAEMGNLMLSVFADFRHPVDETHKRRIRQLAAAFEPKPQFSVDLALVLKNAVKWSAAHGARKRGDPELQLLLARAYRTSGDFTHAMKHFLHAENPQELAEVVFEWSTKGYPSESDLYLARAVLQLLSLENLRDANKVYEVYVAK------CQSAG------RPVDLPLFNFTRFLLLTLEM------------------LQERYAPALARDSSLKSYLSVIGQKFYGLQPPRSG-LSSLLEMFSGGM 307          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G636_ECTSI2.390e-15678.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A9RVM5_PHYPA2.860e-2530.70Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A8K1CSY7_PYTOL6.430e-2428.57Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WXJ1_9STRA1.970e-2327.27Uncharacterized protein AlNc14C355G10942 n=1 Tax=A... [more]
W2MP40_PHYPR2.630e-2227.51Uncharacterized protein n=25 Tax=Phytophthora TaxI... [more]
G4ZUB2_PHYSP2.630e-2229.13Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A485LBU1_9STRA3.770e-2229.29Aste57867_19039 protein n=1 Tax=Aphanomyces stella... [more]
A0A2R5GE43_9STRA6.840e-2229.33Golgi to ER traffic protein 4-like n=1 Tax=Hondaea... [more]
A0A3M6VND9_9STRA8.840e-2228.48Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
H3GH30_PHYRM2.570e-2127.83Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:2406332..2413880 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score466.1
Seed ortholog evalue1.3e-128
Seed eggNOG ortholog2880.D7G636
Preferred nameGET4
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006508,GO:0006605,GO:0006612,GO:0006620,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006996,GO:0007029,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010243,GO:0010256,GO:0010498,GO:0015031,GO:0015833,GO:0016043,GO:0019538,GO:0030163,GO:0031647,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034613,GO:0034976,GO:0036503,GO:0036506,GO:0042221,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045048,GO:0045184,GO:0045185,GO:0046907,GO:0050896,GO:0051087,GO:0051179,GO:0051205,GO:0051220,GO:0051234,GO:0051235,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0061024,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071816,GO:0071818,GO:0071840,GO:0072379,GO:0072380,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1904378
EggNOG free text desc.protein insertion into ER membrane
EggNOG OGsKOG3024@1,KOG3024@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionUncharacterised protein family UPF0363
Ec32 orthologEc-11_004990.1
Exons8
Model size1898
Cds size933
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817245.9642153-CDS-P-fluviatile_contig8:2406331..24065291622817245.9642153-CDS-P-fluviatile_contig8:2406331..2406529Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2406332..2406529 +
1693571656.30074-CDS-P-fluviatile_contig8:2406331..24065291693571656.30074-CDS-P-fluviatile_contig8:2406331..2406529Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2406332..2406529 +
1622817245.9764485-CDS-P-fluviatile_contig8:2408239..24083941622817245.9764485-CDS-P-fluviatile_contig8:2408239..2408394Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2408240..2408394 +
1693571656.3238409-CDS-P-fluviatile_contig8:2408239..24083941693571656.3238409-CDS-P-fluviatile_contig8:2408239..2408394Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2408240..2408394 +
1622817245.988941-CDS-P-fluviatile_contig8:2409029..24091251622817245.988941-CDS-P-fluviatile_contig8:2409029..2409125Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2409030..2409125 +
1693571656.3448012-CDS-P-fluviatile_contig8:2409029..24091251693571656.3448012-CDS-P-fluviatile_contig8:2409029..2409125Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2409030..2409125 +
1622817245.999045-CDS-P-fluviatile_contig8:2409381..24095101622817245.999045-CDS-P-fluviatile_contig8:2409381..2409510Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2409382..2409510 +
1693571656.3580396-CDS-P-fluviatile_contig8:2409381..24095101693571656.3580396-CDS-P-fluviatile_contig8:2409381..2409510Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2409382..2409510 +
1622817246.0087562-CDS-P-fluviatile_contig8:2410252..24103811622817246.0087562-CDS-P-fluviatile_contig8:2410252..2410381Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2410253..2410381 +
1693571656.3727088-CDS-P-fluviatile_contig8:2410252..24103811693571656.3727088-CDS-P-fluviatile_contig8:2410252..2410381Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2410253..2410381 +
1622817246.0226622-CDS-P-fluviatile_contig8:2410866..24109961622817246.0226622-CDS-P-fluviatile_contig8:2410866..2410996Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2410867..2410996 +
1693571656.3856711-CDS-P-fluviatile_contig8:2410866..24109961693571656.3856711-CDS-P-fluviatile_contig8:2410866..2410996Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2410867..2410996 +
1622817246.0331082-CDS-P-fluviatile_contig8:2411865..24119611622817246.0331082-CDS-P-fluviatile_contig8:2411865..2411961Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2411866..2411961 +
1693571656.3972573-CDS-P-fluviatile_contig8:2411865..24119611693571656.3972573-CDS-P-fluviatile_contig8:2411865..2411961Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2411866..2411961 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817246.0441954-UTR-P-fluviatile_contig8:2411961..24119661622817246.0441954-UTR-P-fluviatile_contig8:2411961..2411966Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 2411962..2411966 +
1693571656.4060597-UTR-P-fluviatile_contig8:2411961..24119661693571656.4060597-UTR-P-fluviatile_contig8:2411961..2411966Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 2411962..2411966 +
1622817246.0557084-UTR-P-fluviatile_contig8:2412920..24138801622817246.0557084-UTR-P-fluviatile_contig8:2412920..2413880Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 2412921..2413880 +
1693571656.4139452-UTR-P-fluviatile_contig8:2412920..24138801693571656.4139452-UTR-P-fluviatile_contig8:2412920..2413880Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 2412921..2413880 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14532.1prot_P-fluviatile_contig8.14532.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 2406332..2411961 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14532.1

>prot_P-fluviatile_contig8.14532.1 ID=prot_P-fluviatile_contig8.14532.1|Name=mRNA_P-fluviatile_contig8.14532.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=311bp
MSRRRKPGAKSLDVIQRLQQRVSEGEFYEALQLYKTSYSRLKAQMKLDDA
EELLTAGAIAMSRENELNAATELGLLVVTSFEENSREVDEVRLSQLKRIA
LAMTPGVEMSAFLKRAIRWTRRSKNAAAYELRLIMAKSAMTTGNLAEAAR
YFAVSGCPTEYAALVKKWATMGYPGERDLFVCRAALHTLSCGRTEDAAVL
FDTCATSMLEEDLASSAGGLSSVQSLLESPLCHFTRFVIELCQMKQLAGG
APSGEMVAAFGKLRAAYRISIDRDRNLDELLDRIGDVHLGIKRPQAGGLM
GMLGELIGGL*
back to top

mRNA from alignment at P-fluviatile_contig8:2406332..2413880+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14532.1 ID=mRNA_P-fluviatile_contig8.14532.1|Name=mRNA_P-fluviatile_contig8.14532.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7549bp|location=Sequence derived from alignment at P-fluviatile_contig8:2406332..2413880+ (Porterinema fluviatile SAG_2381)
ATGTCGAGGCGGCGCAAGCCAGGGGCCAAGAGCCTGGATGTGATCCAAAG GCTGCAGCAGCGCGTCTCGGAGGGAGAGTTCTACGAGGCCCTCCAGCTTT ACAAGACCTCTTACTCGCGTCTGAAGGCTCAGATGAAGCTGGACGATGCG GAGGAGCTTCTAACGGCCGGCGCCATCGCCATGTCCAGAGAGAACGAGGT ACGAAGGGTGCCCTTAGTCGAGTGAATGGTTTTTTTGCGTTTATATGTGT TGCGAGACGCTTGTTTCATGTTGCACGTCCTCTCCCTCATAATCAAGAAC TCGGTTCAGACGCAGTCTTACACCGCTGATGGGACACCGCTTGTTGACGA AAACGGGCAACCGCGCAACCGCTGCTGTGTGCCTGTGTGGTTTCCTCGGG TGTTCTCCCTCGTTTGAGATTAGTTGTGCAGGAGATGATTACATTTAAGT TCGCCCATTACAGAGAGTTCAGGGGAGATGTTGTGTGTTTTTCCACGAAA AAAGCTTGGAAAGAGTGCAAGAGCAGAAACTGCTGTTTGTGTTCGCCACA TCGCCACATCCCATGGATCCCTGCCGTGTTTCGATAGGACGGGACTAACA GCAAGGGAACGATCCCCCCTCCCTGGCTGAAGGTTGGCATATATCCACCC CACCCTTGAATGAACTTCGAACGAGTTCCAGCATTCCGTTGGCTGTAACA GCTTAATTTAATCTCTGTTGGCATGGGGTCGGAATACGCGAACCCGATTG GAGAGGCAGTTGACTCATGTATTCGGGATGCAGCTGGGAGGGTAGACACC TGTAAGTTGGTCACTGCACTCTCCTCGTGTAAAATGCCGGCGGTGGTCAA CAGCAAGCGGCGCACATGTATGTATGGACGACGTTGGTTGCGTCATATAT GTGTTGCTTCCGCCCTGGTACGCTCGGCCCTCAAAGTTGATTGAAGGGGA GATATCGGCTGGCATCAGAAGCGATTAGAAGGAAACATACATCACGCGCG TCACGCGCCGAGCGATTGAGGGTATGTGTACGGCGACTCTCGGTCCCACG CCCCCGCGCCCTCGCACCCCTTCGATCTTTGTCTGTAACCCAACCAACAT GTTTGCAGCAGTAAACCCTTTGCGTTTGTTCGTGCGAACCAACCAGGTCA CGATACGGCTGCATGGAAATACGTAGCAGCACTGTCCGCATTTTTTATGC TAATTCACGGGGGTTCAAAGCGTTTGCACTTTGTTTCAAAGAGGGTTCGC GACAAATCAGCCCCCACCCCTCCTCCATATAGCGCGGAGCTCCCTCAAAG CCTGAGGCTGCCTTCGTTGATGTCCGCGTTTAACTTGTTGCTGGTGGTTG TGGTTGCACGTAAGCTTCTCCCGTGGCCGTAGCTCGGGCAACTGCAGAGT CATTATGGAAGTGTGTGTGATCAATAGATCAGAGTCGGCTCTGCGAAACG GGGGATGTGACAACCACTAGCACCCCCCCGCCCCCGCCCCTCGAGGCCGC ATGCTTCTTTAGTACTTGAATAAGGCCTTCTGCCTGTTGGCGACCGCGGT TTTGCTCCGGCGGTGGTTGTTTTGTTTGGGAGTTTCCTTTTGCTCGCTCG GCCGTTGGAGCCCGAACATTGCGCTGACGACCTACCGCCCTTTGCGTCTT ACTTCGGTGCGGTGTTGACGCAGGGACAAATCAACCCCCCCCCCTATTGT GGATGTCAGGTGTAGAGAGTCATGTACTCATACGTACACACATGTAGATA GGAAATACGCGCTCCTCGGCGAGTTATCTCGTTCACCAAAAGGACCATGA ATAACTCCGCTGGAGACCCATGTTGTCCCACACTCCTTTGTGGTAAGAAA TGAGATCACGTCTTTCGGGCGCGTTGCCTCCCCTCAACCCGTCTCAATAT GAATCTAGCTGAACGCCGCCACGGAGCTGGGGCTGCTGGTGGTGACGAGC TTCGAGGAGAACAGCCGCGAGGTCGACGAGGTCAGGCTGTCGCAGCTCAA GCGGATCGCGCTAGCCATGACGCCCGGCGTCGAGATGTCGGCGTTTCTCA AGCGCGCCATAAGGTCAGGTCCGGTCGGGTCGGGCGGGGTGGCTTCGCGC GGGGGGGGTTGCGGCGGCGCGGGCGCCGTGGCGGCGGTGATGAGGAACGG AGATGGGCACGGACTGGCGCATGCGTAGCAGGCGTGGGGTGGATGACGTG TGTTGTCCGTGCAGATATTTTGCTTGTCCCAGTGTCCTCATCCTCCAAGA GCGTTCGGCATCGTGGAGGGGACGTGCAGTGAGAGCTATTTCTACCTTTT TCTCGTTCTCCCTCGCCTTTCCACGTTTGTCTGTTTGTCAATTATTTCTT CCTTCTGATACTGCCTCGGGAACGTCTATTGACTGTCCCCGGAAGAACAT GCACGCTCCACTCCTAAATGCAGGTGAGTGCTGTACCTCAAAAACCATGC CACATGTTTGccCCCCCCTCCCCTCATGATATCGGATGGTTCTCTTTCGG AATTATACCGAGTACCTGCCGCCTTCACACTGTGGTCTCGATGCCAAAGC TCTACCTCCTTCTGTCCCCTCTCCTCTTAGTTCATACGTACTCTGCGTCT CCCCCCGCCCCTTCCCCACCCACTCGCCATCTTCGTTAACCTCGCTGTCT CTATCAACTATCGCACGTGTCGATGATCGTCGACGGCAATTACCGCAGAT GGACAAGACGTTCCAAGAACGCAGCGGCCTACGAGCTGCGGCTCATCATG GCAAAATCTGCCATGACCACGGGCAACCTCGCCGAGGCGGCAAGGTGAAC CGACCCGCAAAGAGAACGTGTTTATAGAAGGAGGGAGCCAAATAGACGGG GGTCGGGGATGGTTGGGTCTCTGGTGGAAGGGGGAAGAAGTTGACCTAAA TGTAGTGCGGTGCGATTGGTATCATGAGAGCCCCGGTTTCCAGCTCACCT TCGAATGATCAACAGAGTCAAATCTTTTTCGCCTCGCGACAAGGCCCAGG CGTCGCCCGCCCGCTGAAAGTCAAGCGCACCAACATGCAAACACGTGCAG GTACTTTGCGGTGTCCGGGTGTCCGACGGAGTACGCGGCGCTGGTGAAGA AGTGGGCAACGATGGGCTACCCGGGGGAGAGGGACTTGTTTGTCTGCAGG GCCGCGCTCCACACGCTGTCCTGCGGCAGGTGAAATATCCTTTGGCGGGT CAGATGATGGGCTGCGGGATAGGAGGGGTTACGGGGTGGTGAGGGAGGAG GAGGTTTGTCGCTGGTGAAGCAGTGGGCGACGAAGGCCTACCCGGCGGTG AGGGATTTTTTTATCTATAGGGTCGCGCTCCACCCGCTCTCCTATGGTAG GTGAAACATCCGTTGGCGGATAAGATAAGGGGCTGCGGGATCGGAAGGGT TACTGGGTGATGAGGGGGAAGGAGAAGATTTATTGCTCGTGGGTTTACAT ACCAGTCGAGTAAAATGTGTACCACTTATCTTGTTCAAGTTTTTCATCTC TGCAGGTGTTGTTTTTTTTCGTTGCGCGCCCGTACGCTTGAGGGAAGGAG CGACCTGTGATGAACGCTGGTTTTTGCGGACATTGAAGGCGAGCACCGCA GGCGGAAGGATAGGGTGCTGTGTTTGTCGTGTCTCCTATGTGCTGCCCCG GCTAGTGCGCATGTTCTGGGGTCAAGAGGAATGGGCTGGAGGCAACAACA ACAACAAGGTCGTGATCAGCTTATTTTGATTCTGCTGCACTTTTTGCCTC GTTATCTGTGTCGTGAGGGCCTAGTCCAGGCGTGCGTGGGGTGTCGTCTC CGCCAAAGTGCGGTGCCTGCCGCTCGCACTCCGCGCCCACACGTGCATAC AGTTGATCACCCCCATCCTATCCTTCATAGTGTAACATCACCCCCCACCC CTCCTCCTCCTTGTCCGCCAGAACGGAGGACGCAGCCGTGCTCTTCGACA CGTGCGCGACCTCCATGCTGGAGGAGGACTTGGCTTCATCCGCGGGCGGA TTGTCCAGCGTGCAGTCGCTGTTGGAATCACCGCTGTGCCACTTCACCCG GTGAGAGCGAAAGGCCGTCGATTTAGAACAAAAGATTGATTCGTGAGATG TTTCGAGAGACGGTCACGGCGAAAGAGAGAAAGAAGCCAGTGCCCGTGTT GGTAAGGCCATCGCGGCGGTTGCGACGGTGTTGCAGGTTTGACGTAGCGC CCACTTGTGTTGTTGCGAAGGGACGGAACGGCGCATCGCTATAAACCCCA CCGACAGTCGCCATTGCATTTTCCATGGGCATTCGCTTCCCTTGTTTCCA CACCGTTGTTTGTTTCCTGTTACCTGATTTTTTTTTTTTTCTGCTAGCGT CTTTACATTCATCGACTCTGATCTTGCTTTACGCAAGGATAGCAAGGATA AACAATTGCTTTTTCTTCCCTATGAAGGCCAATCTCTCTCTGTCTCTCCA CCCTGTCGTCTCTATCTGCTTGGTTCTCGATTCTTTTTGTATGCTTTCTC ACCACGATCCCATCAACACCTTTTCGGTGGGTCAGATTCGTGATAGAGCT CTGCCAGATGAAGCAGCTCGCGGGGGGGGCGCCGTCGGGGGAGATGGTGG CGGCATTCGGCAAGCTCCGAGCGGCCTACCGAATTTCCATCGACCGGGAC CGGAACCTCGATGAGGTAAGTGTGACTACAAACACCGACGAGAGTCATGC AGAATCTCGTGGAGGAGGTGCGTTTGATGAAGTGGACAACCGACAGTCAT GCAGAACCTCGAGGAGGTCGATGTGACCAGGGGAACGCTCGAAAAACAAT AAAAACATGCAGAACCTCGAAGAGGTGGGTGTGACCAGGTAGATAGTTTG GAGGCACACAGAACCTCGATGAGGATGTGCGTGTTCAGCAGGTACGCAGT CGAGAGACACGCAACTGCTCGAGGAGGTGGTTGTTGCCAGTCAGGCATTC GAGAGACGTTCGGACAGCCAGATGAACGCACGCGCGCGAGAGAGGGACAC ACAGGAAGTTGAAATGGAGATATCGATCTGACATTGTACGGAGAGATGAT GACAGCAATCGAGGGGAGGGTGGGGGTAGAGGGGGGAGGAAAAGGGCGAA AAAGCTGACAGTCCCGCCCTTTGCCGAGGCAGGCTGGGGCATGATTGGAA CTCGTGCCGCAAAACGTCCCTGAGTGTGGTAAAGGGAGAACGCTGGCGGA CCGAGGTCGAACCCGGAAGGCCTTTGAGCGCGCGCGCACACAATTCTTGG GCGCTCGCCCTCTTTTTCTGTTTGTAGACTATGCGGGTAACGCAAATGCA GGCAAACCTTCCGCATCCCAAAATTTGGAGTCAGGATGGTGCTGCGAGCT GTCCTTCTCCCCCTTGCCACCGTACATTTGAGCTGTAGAAGTATCGTATG ACTCGAGTATATCGGGATAAGTTGTCCGCCTAATGCGATCGTCACCAATC GTCGCAAATGCTCCTGATTGTTTTCTTTGTTATCTTCCGCCGCTGCCGAT GCCTCTGCTGCCGCTGCCGCTGCCAATGCCGCAGCTTTTGGACCGAATAG GCGACGTGCACCTCGGCATCAAACGTCCTCAGGCTGGGGGGCTAATGGGT ATGTTGGGGGAGCTGATTGGCGGGCTGTGACGCAGGTAAGACACGTAAAG ACCAGTTTCGGGCACGACGTGGGTGTGAACGGGGGGGGCGGGGGCGGGAG GAGGAGACTCCCGGCTAAGTGCGGAGAGCGGCATTTATAATCGCGAGCGC ACGGCAGCGGGCAGCTGTCTGCTGGCCTGCTGGAGAAGTTCCTGGGTCTC AGTTGAATGTGTCTTCAAAATGGGAGGACCCTGTTCCCGCCACAATTTCA CCGTTTCTTCACCGTGTTGATCAATCCCGGTCGTTTTGTGCTCCCTTTGC CGGGATGCTTGGAATATTTGTAGTGTTTTCTCTTGTTCATGTACTTATTT CTCGCTGACAGGGGCGCCGGGCCGGGCCGGGCCGGGCCAGGCCTGGCATG GCCTTATCTCCAGCCAGCTCAACCAACCTCGTCGCTGTGATTGTTTTGTT TTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTGTCGTCGCATTTCAGCCC TTTCGATCACCTCTAGTTCTTGCATTGCGTCGGATCATATCCGGGTGGTG GCTGTAAACCACAGCCACTTACGCCGTTTTTCGGAAAGCTGGGTTGCCTC GCCACTGCAGGCAGGGAGCGCACGGCTGCTGCCAACGAACACGTTTAAGG AGAACTCTCGATGCGGTCGATACAAACCCGTCGTTTTACGAGCCCGCCAC TTATCCCCCCGTTCCGATGTCGGGATCCGTTAGTCTGCTGAAGAAGGTCC CATGGTAGTTATTGCCTTTGCGTGTCGTCAGCAGTTGTATTGGAGGCATA AGTACCGAATGGGTGGCACCCTCTAATGGCAATGGTCTGAACATGCGAAA GTAAACCTGCTGAAGAAAATATGATTTTCTCCTGCGTGAACGTTTTTCTT TTTATCAATGCCTCTCGACTCCTCTCCCCACGCCACGTTGCATATGGCTC GCCGCACGACCTCTCTCTCGCACATCTGATTTCATTCAGGCCGTTCCACC ACGCGCGACCGACCGCTGTTGATAGTGGGTTGTGGGATCACTCGCACGGC GGAGTCGGGCGGTCGTGTCCAAGTCTTGCAAACCTTCACGGCCCAGCACC GAAGTTTCACGAGTTGAGCGTACAGGCTCATTTGGAACCTACATCAGGCT CTCTTTATATTTGGCCGGTCGGGGAGAAGGGAGCATAAGGGTGAACTCCG TAGTTCGTAACGATTGTTGTGCAGTATGTATCGCTCACGATCAACTCCAT GATATTAAGTGTGGGATTGCGCTCTAGAGGTTGCCTCTAGGACAGTGCTT GAGGGTCTTGCCCGCCGTTGTACTGCACAGTTTTGGCTCTCTCACGAAGC TGGAGTATACCACGGCCGCAAGAGGGCGCACTGATCGACTTCTTTTAGCG ATCAAAGGTAGAAGCAATAGTCAACGGTTTCTCAATTGTCCAATGAAAGG TAGTTATGCTTTCTACACGGAGTTTGAGGCGAACACTCAGAAAAAAGCTG TCTCGACACCCGTGATCGCCATCCCCTGGAAGTTGGCTTCACGAACAGAA CGCACTGGGTGATGTGAAACGCTTCCTTCACTGTTTGTTCTATTTCTTGA TATGGCACAGGAGCTGTTGTCAAGGGTTTTCCGTAGAACGGGATGCGTTC CGCAGATTACCGACATGCCCACCCTGGCGAGAGGCGGGAATCTGTGCTGT GATGCCCATCATAAACTTGACGTCGTTTTGGTCTATTTGTACCCGGCCGC GTTTCCGTTTTCGTTGAAGCACGGGCTTGCATCGTTGCCCGCGTACGTGC CGTCCCGACTGTTTTGCTTTCTGTTGAATCCTTGGTGCAACGGCAGGTGG AATTGGCTGACAAATCGATCGAAAAGGGTCTCAAACCCACCCCATGCAGA ATATTTTGGAGGCCTCTGGTGTGCGTTTATGTTTTCCGAGACAGCTCCG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig8:2406332..2413880+

>mRNA_P-fluviatile_contig8.14532.1 ID=mRNA_P-fluviatile_contig8.14532.1|Name=mRNA_P-fluviatile_contig8.14532.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1866bp|location=Sequence derived from alignment at P-fluviatile_contig8:2406332..2413880+ (Porterinema fluviatile SAG_2381)
ATGTCGAGGCGGCGCAAGCCAGGGGCCAAGAGCCTGGATGTGATCCAAAG
GCTGCAGCAGCGCGTCTCGGAGGGAGAGTTCTACGAGGCCCTCCAGCTTT
ACAAGACCTCTTACTCGCGTCTGAAGGCTCAGATGAAGCTGGACGATGCG
GAGGAGCTTCTAACGGCCGGCGCCATCGCCATGTCCAGAGAGAACGAGAT
GTCGAGGCGGCGCAAGCCAGGGGCCAAGAGCCTGGATGTGATCCAAAGGC
TGCAGCAGCGCGTCTCGGAGGGAGAGTTCTACGAGGCCCTCCAGCTTTAC
AAGACCTCTTACTCGCGTCTGAAGGCTCAGATGAAGCTGGACGATGCGGA
GGAGCTTCTAACGGCCGGCGCCATCGCCATGTCCAGAGAGAACGAGCTGA
ACGCCGCCACGGAGCTGGGGCTGCTGGTGGTGACGAGCTTCGAGGAGAAC
AGCCGCGAGGTCGACGAGGTCAGGCTGTCGCAGCTCAAGCGGATCGCGCT
AGCCATGACGCCCGGCGTCGAGATGTCGGCGTTTCTCAAGCGCGCCATAA
GCTGAACGCCGCCACGGAGCTGGGGCTGCTGGTGGTGACGAGCTTCGAGG
AGAACAGCCGCGAGGTCGACGAGGTCAGGCTGTCGCAGCTCAAGCGGATC
GCGCTAGCCATGACGCCCGGCGTCGAGATGTCGGCGTTTCTCAAGCGCGC
CATAAGATGGACAAGACGTTCCAAGAACGCAGCGGCCTACGAGCTGCGGC
TCATCATGGCAAAATCTGCCATGACCACGGGCAACCTCGCCGAGGCGGCA
AGATGGACAAGACGTTCCAAGAACGCAGCGGCCTACGAGCTGCGGCTCAT
CATGGCAAAATCTGCCATGACCACGGGCAACCTCGCCGAGGCGGCAAGGT
ACTTTGCGGTGTCCGGGTGTCCGACGGAGTACGCGGCGCTGGTGAAGAAG
TGGGCAACGATGGGCTACCCGGGGGAGAGGGACTTGTTTGTCTGCAGGGC
CGCGCTCCACACGCTGTCCTGCGGCAGGTACTTTGCGGTGTCCGGGTGTC
CGACGGAGTACGCGGCGCTGGTGAAGAAGTGGGCAACGATGGGCTACCCG
GGGGAGAGGGACTTGTTTGTCTGCAGGGCCGCGCTCCACACGCTGTCCTG
CGGCAGAACGGAGGACGCAGCCGTGCTCTTCGACACGTGCGCGACCTCCA
TGCTGGAGGAGGACTTGGCTTCATCCGCGGGCGGATTGTCCAGCGTGCAG
TCGCTGTTGGAATCACCGCTGTGCCACTTCACCCGAACGGAGGACGCAGC
CGTGCTCTTCGACACGTGCGCGACCTCCATGCTGGAGGAGGACTTGGCTT
CATCCGCGGGCGGATTGTCCAGCGTGCAGTCGCTGTTGGAATCACCGCTG
TGCCACTTCACCCGATTCGTGATAGAGCTCTGCCAGATGAAGCAGCTCGC
GGGGGGGGCGCCGTCGGGGGAGATGGTGGCGGCATTCGGCAAGCTCCGAG
CGGCCTACCGAATTTCCATCGACCGGGACCGGAACCTCGATGAGATTCGT
GATAGAGCTCTGCCAGATGAAGCAGCTCGCGGGGGGGGCGCCGTCGGGGG
AGATGGTGGCGGCATTCGGCAAGCTCCGAGCGGCCTACCGAATTTCCATC
GACCGGGACCGGAACCTCGATGAGCTTTTGGACCGAATAGGCGACGTGCA
CCTCGGCATCAAACGTCCTCAGGCTGGGGGGCTAATGGGTATGTTGGGGG
AGCTGATTGGCGGGCTGTGACTTTTGGACCGAATAGGCGACGTGCACCTC
GGCATCAAACGTCCTCAGGCTGGGGGGCTAATGGGTATGTTGGGGGAGCT
GATTGGCGGGCTGTGA
back to top