mRNA_P-fluviatile_contig8.14528.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14528.1
Unique NamemRNA_P-fluviatile_contig8.14528.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:2317519..2318871 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-11_004930.1
Exons1
Model size1354
Cds size1353
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817218.618616-CDS-P-fluviatile_contig8:2317518..23188711622817218.618616-CDS-P-fluviatile_contig8:2317518..2318871Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2317519..2318871 -
1693571543.9955914-CDS-P-fluviatile_contig8:2317518..23188711693571543.9955914-CDS-P-fluviatile_contig8:2317518..2318871Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 2317519..2318871 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14528.1prot_P-fluviatile_contig8.14528.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 2317519..2318871 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14528.1

>prot_P-fluviatile_contig8.14528.1 ID=prot_P-fluviatile_contig8.14528.1|Name=mRNA_P-fluviatile_contig8.14528.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=451bp
TREKREPCQNTRRGSTTELVDASIGIQIFLFMYIGAWTEYRLAQEQLQNR
SQNAGQPRDRKGGIYHSALADNDGVEVAGLPDRESFRRTLKSTLSSNLAA
DDAETISQALEPLMQRLPTIWAAPAPAAPTRRRQAGGVLLPMSRSGRPAQ
LPCHQQRPNTKNNRRPCGAPPRYICTQSDVGTRCAAEPASDGTRSTRSGF
STASAPLNTVAGTKDRRAGFACLSGRGRGGGFRFGAKHRQERPGGESRMP
QLPLIANTRRQQLHGHGSGEEHPGASHCSNDSCGSTRGDSASIQPIETCC
NDYPGRRSGDSHVTTASAEGTMNDGHHDKEVEPGERGFDSGAAATILRVA
RRRDPAGVKADFEQFWTWRRKASCTHVFSNGSKRTLPSTSRDISSSAKRA
ASGAGAGGATAAASRLEALARMKSVYMAKGNNECVCSPRIAAGGAPTGQN
P
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mRNA from alignment at P-fluviatile_contig8:2317519..2318871-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14528.1 ID=mRNA_P-fluviatile_contig8.14528.1|Name=mRNA_P-fluviatile_contig8.14528.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1353bp|location=Sequence derived from alignment at P-fluviatile_contig8:2317519..2318871- (Porterinema fluviatile SAG_2381)
ACAAGGGAGAAACGAGAGCCTTGTCAAAACACACGGCGAGGGTCGACGAC
TGAACTCGTCGATGCATCCATCGGGATACAGATCTTCCTGTTCATGTATA
TCGGCGCGTGGACAGAGTACCGGCTGGCGCAGGAACAGCTGCAAAACAGG
AGTCAAAATGCGGGACAACCTCGCGACCGGAAGGGCGGCATTTACCACTC
GGCTCTCGCCGACAACGATGGTGTGGAAGTGGCGGGTCTACCAGACCGCG
AGAGCTTTCGAAGGACCCTGAAATCGACGCTCTCGTCGAACCTTGCTGCA
GATGATGCGGAGACCATTTCACAGGCGCTCGAACCCTTGATGCAACGCCT
CCCGACGATCTGGGCAGCACCAGCACCAGCAGCACCCACCCGGAGGAGGC
AGGCGGGGGGCGTACTCCTGCCGATGAGTAGATCTGGGAGGCCTGCTCAG
CTCCCTTGCCATCAGCAGCGGCCAAACACAAAGAATAACAGGCGACCTTG
CGGCGCCCCCCCCAGGTATATTTGCACACAGAGCGACGTTGGTACACGGT
GTGCTGCCGAGCCGGCTTCCGACGGGACTCGTTCGACACGATCCGGGTTC
TCTACAGCTAGCGCACCGTTGAATACCGTCGCTGGGACGAAGGATCGCCG
CGCTGGATTTGCATGCTTGAGCGGTCGCGGTAGAGGTGGTGGGTTTCGGT
TTGGTGCGAAGCACCGACAGGAAAGGCCAGGAGGCGAGAGCAGAATGCCC
CAGCTGCCGCTGATCGCCAACACGAGGCGACAACAGCTACATGGCCATGG
AAGTGGAGAGGAACATCCTGGCGCCAGCCACTGTTCCAACGATAGCTGTG
GTTCCACCCGCGGAGATTCAGCATCAATTCAGCCTATCGAGACTTGCTGC
AACGATTACCCCGGTAGAAGAAGTGGCGATTCCCATGTCACTACTGCGTC
AGCAGAGGGGACCATGAATGACGGTCACCACGATAAAGAAGTGGAACCAG
GTGAAAGGGGGTTCGACAGTGGGGCTGCGGCAACGATACTACGGGTAGCA
AGGAGACGAGATCCGGCCGGTGTGAAAGCAGATTTCGAGCAGTTCTGGAC
CTGGAGGAGGAAAGCATCGTGCACACACGTATTTTCAAACGGGAGCAAAA
GGACCCTGCCGTCTACTTCAAGAGACATATCTTCTTCTGCCAAGAGGGCT
GCCAGCGGCGCAGGAGCTGGTGGCGCCACTGCTGCCGCATCAAGGCTAGA
GGCTCTTGCGAGGATGAAGTCGGTTTACATGGCGAAGGGGAACAACGAAT
GTGTGTGTTCCCCGAGAATAGCAGCAGGAGGTGCCCCAACAGGACAAAAC
CCG
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:2317519..2318871-

>mRNA_P-fluviatile_contig8.14528.1 ID=mRNA_P-fluviatile_contig8.14528.1|Name=mRNA_P-fluviatile_contig8.14528.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2706bp|location=Sequence derived from alignment at P-fluviatile_contig8:2317519..2318871- (Porterinema fluviatile SAG_2381)
ACAAGGGAGAAACGAGAGCCTTGTCAAAACACACGGCGAGGGTCGACGAC
TGAACTCGTCGATGCATCCATCGGGATACAGATCTTCCTGTTCATGTATA
TCGGCGCGTGGACAGAGTACCGGCTGGCGCAGGAACAGCTGCAAAACAGG
AGTCAAAATGCGGGACAACCTCGCGACCGGAAGGGCGGCATTTACCACTC
GGCTCTCGCCGACAACGATGGTGTGGAAGTGGCGGGTCTACCAGACCGCG
AGAGCTTTCGAAGGACCCTGAAATCGACGCTCTCGTCGAACCTTGCTGCA
GATGATGCGGAGACCATTTCACAGGCGCTCGAACCCTTGATGCAACGCCT
CCCGACGATCTGGGCAGCACCAGCACCAGCAGCACCCACCCGGAGGAGGC
AGGCGGGGGGCGTACTCCTGCCGATGAGTAGATCTGGGAGGCCTGCTCAG
CTCCCTTGCCATCAGCAGCGGCCAAACACAAAGAATAACAGGCGACCTTG
CGGCGCCCCCCCCAGGTATATTTGCACACAGAGCGACGTTGGTACACGGT
GTGCTGCCGAGCCGGCTTCCGACGGGACTCGTTCGACACGATCCGGGTTC
TCTACAGCTAGCGCACCGTTGAATACCGTCGCTGGGACGAAGGATCGCCG
CGCTGGATTTGCATGCTTGAGCGGTCGCGGTAGAGGTGGTGGGTTTCGGT
TTGGTGCGAAGCACCGACAGGAAAGGCCAGGAGGCGAGAGCAGAATGCCC
CAGCTGCCGCTGATCGCCAACACGAGGCGACAACAGCTACATGGCCATGG
AAGTGGAGAGGAACATCCTGGCGCCAGCCACTGTTCCAACGATAGCTGTG
GTTCCACCCGCGGAGATTCAGCATCAATTCAGCCTATCGAGACTTGCTGC
AACGATTACCCCGGTAGAAGAAGTGGCGATTCCCATGTCACTACTGCGTC
AGCAGAGGGGACCATGAATGACGGTCACCACGATAAAGAAGTGGAACCAG
GTGAAAGGGGGTTCGACAGTGGGGCTGCGGCAACGATACTACGGGTAGCA
AGGAGACGAGATCCGGCCGGTGTGAAAGCAGATTTCGAGCAGTTCTGGAC
CTGGAGGAGGAAAGCATCGTGCACACACGTATTTTCAAACGGGAGCAAAA
GGACCCTGCCGTCTACTTCAAGAGACATATCTTCTTCTGCCAAGAGGGCT
GCCAGCGGCGCAGGAGCTGGTGGCGCCACTGCTGCCGCATCAAGGCTAGA
GGCTCTTGCGAGGATGAAGTCGGTTTACATGGCGAAGGGGAACAACGAAT
GTGTGTGTTCCCCGAGAATAGCAGCAGGAGGTGCCCCAACAGGACAAAAC
CCGACAAGGGAGAAACGAGAGCCTTGTCAAAACACACGGCGAGGGTCGAC
GACTGAACTCGTCGATGCATCCATCGGGATACAGATCTTCCTGTTCATGT
ATATCGGCGCGTGGACAGAGTACCGGCTGGCGCAGGAACAGCTGCAAAAC
AGGAGTCAAAATGCGGGACAACCTCGCGACCGGAAGGGCGGCATTTACCA
CTCGGCTCTCGCCGACAACGATGGTGTGGAAGTGGCGGGTCTACCAGACC
GCGAGAGCTTTCGAAGGACCCTGAAATCGACGCTCTCGTCGAACCTTGCT
GCAGATGATGCGGAGACCATTTCACAGGCGCTCGAACCCTTGATGCAACG
CCTCCCGACGATCTGGGCAGCACCAGCACCAGCAGCACCCACCCGGAGGA
GGCAGGCGGGGGGCGTACTCCTGCCGATGAGTAGATCTGGGAGGCCTGCT
CAGCTCCCTTGCCATCAGCAGCGGCCAAACACAAAGAATAACAGGCGACC
TTGCGGCGCCCCCCCCAGGTATATTTGCACACAGAGCGACGTTGGTACAC
GGTGTGCTGCCGAGCCGGCTTCCGACGGGACTCGTTCGACACGATCCGGG
TTCTCTACAGCTAGCGCACCGTTGAATACCGTCGCTGGGACGAAGGATCG
CCGCGCTGGATTTGCATGCTTGAGCGGTCGCGGTAGAGGTGGTGGGTTTC
GGTTTGGTGCGAAGCACCGACAGGAAAGGCCAGGAGGCGAGAGCAGAATG
CCCCAGCTGCCGCTGATCGCCAACACGAGGCGACAACAGCTACATGGCCA
TGGAAGTGGAGAGGAACATCCTGGCGCCAGCCACTGTTCCAACGATAGCT
GTGGTTCCACCCGCGGAGATTCAGCATCAATTCAGCCTATCGAGACTTGC
TGCAACGATTACCCCGGTAGAAGAAGTGGCGATTCCCATGTCACTACTGC
GTCAGCAGAGGGGACCATGAATGACGGTCACCACGATAAAGAAGTGGAAC
CAGGTGAAAGGGGGTTCGACAGTGGGGCTGCGGCAACGATACTACGGGTA
GCAAGGAGACGAGATCCGGCCGGTGTGAAAGCAGATTTCGAGCAGTTCTG
GACCTGGAGGAGGAAAGCATCGTGCACACACGTATTTTCAAACGGGAGCA
AAAGGACCCTGCCGTCTACTTCAAGAGACATATCTTCTTCTGCCAAGAGG
GCTGCCAGCGGCGCAGGAGCTGGTGGCGCCACTGCTGCCGCATCAAGGCT
AGAGGCTCTTGCGAGGATGAAGTCGGTTTACATGGCGAAGGGGAACAACG
AATGTGTGTGTTCCCCGAGAATAGCAGCAGGAGGTGCCCCAACAGGACAA
AACCCG
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