mRNA_P-fluviatile_contig8.14526.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14526.1 vs. uniprot
Match: D7G631_ECTSI (Sld5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G631_ECTSI) HSP 1 Score: 373 bits (957), Expect = 1.740e-128 Identity = 187/205 (91.22%), Postives = 198/205 (96.59%), Query Frame = 1
Query: 1 MPSVDAGGLAQVTAAELEFIAEDELIEIVPKFKHGPLHLIQGDFGPFVPQARSKVPLWLAITLKKRQKCQIACPPFMSVSYLDQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIDEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLYIISGQKTADQRARDLEERLPAARGAG 615
MPS D+GGLAQ+TAAELEFIAED LIEIVPKFKHGPLHLIQGDFGPFVPQAR+KVPLWLAITLKKRQKCQIACP FMSV YL+QVLRREREDAAVFTPLPHHYLEIASLLLNTASDDI+EPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLY++SGQK+AD RARDLEE++PA R +G
Sbjct: 1 MPSADSGGLAQLTAAELEFIAEDALIEIVPKFKHGPLHLIQGDFGPFVPQARAKVPLWLAITLKKRQKCQIACPSFMSVGYLEQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIEEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLYVVSGQKSADHRARDLEEKMPATRASG 205
BLAST of mRNA_P-fluviatile_contig8.14526.1 vs. uniprot
Match: A0A836CII2_9STRA (Sld5 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CII2_9STRA) HSP 1 Score: 196 bits (497), Expect = 7.390e-59 Identity = 107/206 (51.94%), Postives = 141/206 (68.45%), Query Frame = 1
Query: 4 PSVDAGGLAQVTAAELEFIAEDELIEIVPKFKHGPLHLIQGDFGPFVPQARSKVPLWLAITLKKRQKCQIACPPFMSVSYLDQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIDEP-DRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLYIISGQKTADQRARDLEERLPAARGAGA 618
P +A L ++ ELE++A DE++E+VP H LH +G +GPFV +R+ VPLWLAI LK+R K IACPP+M+ L++VL ER + F LP HYLEI+SLLL+ A+DD+ + DR+R LLED+ENVR+ KMY+GMG AAQ A+KVN +GAMELLPVR+FF+ AL+S+Y ISG K + AR P A G A
Sbjct: 9 PGSEASTLRHLSPDELEYLAGDEMVEVVPSESHKRLHF-RGTYGPFVAGSRTAVPLWLAIMLKRRNKASIACPPWMTAESLERVLAAERREET-FAELPFHYLEISSLLLSVAADDMGQQVDRMRVLLEDIENVRQGKMYKGMGDAAQRADGAIKVNRIGAMELLPVRTFFSAALSSMYDISGAKGRAEVARLQRVSAPDAMGGAA 212
BLAST of mRNA_P-fluviatile_contig8.14526.1 vs. uniprot
Match: A0A4D9D8T4_9STRA (DNA replication complex GINS protein PSF2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8T4_9STRA) HSP 1 Score: 169 bits (429), Expect = 2.680e-49 Identity = 84/185 (45.41%), Postives = 124/185 (67.03%), Query Frame = 1
Query: 28 AQVTAAELEFIAEDELIEIVPKFKHGPLHLIQGDFGPFVPQARSKVPLWLAITLKKRQKCQIACPPFMSVSYLDQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIDEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQ-----AVKVNDLGAMELLPVRSFFAEALASLYIISGQKTADQ 567
AQ ++E+EF+AE+ +IEI +F H PL LI+G FGPF P R+KVPLWL ++LKK++KC++ P ++ +L +VLR+ER +F LP +Y+EIA+LLL TA+D+ PDR R+L+ED+ENVR K+ G+ + V + + K+N +GAME+ VR F EA+ Y +SGQ+ Q
Sbjct: 3 AQSRSSEMEFLAEEMIIEIEARFNHPPLKLIRGTFGPFYPNQRAKVPLWLGLSLKKQKKCRLVLPEWLDSEHLAEVLRQERAQEGIFQDLPFYYVEIATLLLATAADEFPMPDRTRSLVEDIENVRMEKIRRGLQGMSDTVLRGRSVMSTKMNHVGAMEITTVRGFLTEAMGLFYTLSGQEVVAQ 187
BLAST of mRNA_P-fluviatile_contig8.14526.1 vs. uniprot
Match: A0A7S2D0T8_9STRA (DNA replication complex GINS protein PSF2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D0T8_9STRA) HSP 1 Score: 165 bits (418), Expect = 5.240e-47 Identity = 87/201 (43.28%), Postives = 128/201 (63.68%), Query Frame = 1
Query: 37 TAAELEFIAEDELIEIVPKFKHGPLHLIQGDFGPFVPQARSKVPLWLAITLKKRQKCQIACPPFMSVSYLDQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIDEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQ------AVKVNDLGAMELLPVRSFFAEALASLYIISGQKTAD------QRARDLEERLPAA 603
T E+EF AE+EL+EI+P+F HG H I GDFGP VP KVPLWLA+TL+KRQKC+I P ++ +L ++L E+ D F LP HY+EIA+ L+ T+++DI + +RVRT+LED++N+R +K+ GM A +V++ AVK+ ++ A+EL +R F AL Y +S Q +A R R ++ P+A
Sbjct: 6 TVDEIEFRAEEELVEIIPRFAHGIFHFISGDFGPLVPPVPVKVPLWLAVTLRKRQKCKIQPPSWIDYDHLSKILENEQNDLDSFQELPFHYIEIAASLIATSAEDIPDCERVRTILEDIQNLRWSKIRRGMQLIADKVKEDDERITAVKLTNVSALELHAIRPFMTGALNQFYRLSQQPSAQPGLASRSRRRSIQRSSPSA 206
BLAST of mRNA_P-fluviatile_contig8.14526.1 vs. uniprot
Match: A0A6J1D7Q0_MOMCH (DNA replication complex GINS protein PSF2 n=3 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1D7Q0_MOMCH) HSP 1 Score: 159 bits (403), Expect = 4.130e-45 Identity = 86/171 (50.29%), Postives = 111/171 (64.91%), Query Frame = 1
Query: 25 LAQVTAAELEFIAEDELIEIVPKFKHGPLHLIQGDFGPFVPQARSKVPLWLAITLKKRQKCQIACPPFMSVSYLDQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIDEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLY 537
LA +A E+EF+AEDEL+EIVP + PLHLI GD+GPF PQ ++VPLWLAI LKKR KC I P +MSV L Q+L ERE F LP HY+EI+ LL + A DD+ + VR+L+ED+ +VR K+ + S AVK+ DL AME+ VR F AL ++Y
Sbjct: 9 LALFSAEEVEFVAEDELVEIVPNMRMDPLHLICGDYGPFYPQIAAEVPLWLAIALKKRGKCAIRSPEWMSVEKLTQILEAERESQGAFQILPFHYVEISKLLFDHARDDVPDMYLVRSLIEDIRDVRFHKVETSLESIDTRTS-AVKIKDLSAMEVNIVRPFVGRALQAIY 178
BLAST of mRNA_P-fluviatile_contig8.14526.1 vs. uniprot
Match: A0A833QQX9_9POAL (DNA replication complex GINS protein PSF2 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QQX9_9POAL) HSP 1 Score: 159 bits (402), Expect = 7.830e-45 Identity = 87/171 (50.88%), Postives = 112/171 (65.50%), Query Frame = 1
Query: 25 LAQVTAAELEFIAEDELIEIVPKFKHGPLHLIQGDFGPFVPQARSKVPLWLAITLKKRQKCQIACPPFMSVSYLDQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIDEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLY 537
L+ +A E+EF+AEDE+IEIVP + L+L+ GDFGPF+PQ KVPLWLA+ LKKR KC I P +MSV L QVL ERE F PLP HY+EI+ LLL+ A DDI E VR+L+ED+ NVR K+ G+ + + AVK+ +L AME+ VR F L + Y
Sbjct: 9 LSIFSAPEVEFLAEDEMIEIVPNIRMDALNLLCGDFGPFLPQIACKVPLWLAVALKKRGKCSIRTPDWMSVEKLTQVLEAERESPREFQPLPFHYVEISRLLLDHAHDDIPEVYMVRSLIEDIRNVRFHKVESGLETISGRTH-AVKLKNLSAMEVNIVRPFMVRVLQAFY 178
BLAST of mRNA_P-fluviatile_contig8.14526.1 vs. uniprot
Match: A0A2Z7API4_9LAMI (DNA replication complex GINS protein PSF2 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7API4_9LAMI) HSP 1 Score: 159 bits (401), Expect = 9.020e-45 Identity = 89/205 (43.41%), Postives = 128/205 (62.44%), Query Frame = 1
Query: 1 MPSVDAGGLAQVTAAELEFIAEDELIEIVPKFKHGPLHLIQGDFGPFVPQARSKVPLWLAITLKKRQKCQIACPPFMSVSYLDQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIDEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLYIISGQKTADQRARDLEERLPAARGAG 615
M + +AAELEF+AEDE++EIVP F+ PL+ I GDFGPF+PQ ++VPLWLA++L+KR KC I P +MSV L QVL ER D+ F PLP HY+EI+ LL + A +DI + VR+L+ED+++VR K+ G+ ++E A+++ +L AME VR F +AL + + +S + Q + R P A G
Sbjct: 1 MAGASGSNASAFSAAELEFLAEDEMVEIVPNFRMEPLNFISGDFGPFIPQMPTEVPLWLAVSLRKRGKCTIRTPEWMSVEKLTQVLEAER-DSEKFQPLPFHYVEISRLLFDHAREDIPDIYMVRSLIEDIKDVRFHKIGTGLEIISKERTYALRLKNLSAMEANIVRPFVTKALETFHKLSSSEMI-QETDHISNRQPQATNRG 203
BLAST of mRNA_P-fluviatile_contig8.14526.1 vs. uniprot
Match: A0A388JJI9_CHABU (Sld5 domain-containing protein (Fragment) n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JJI9_CHABU) HSP 1 Score: 158 bits (399), Expect = 1.340e-44 Identity = 80/165 (48.48%), Postives = 113/165 (68.48%), Query Frame = 1
Query: 43 AELEFIAEDELIEIVPKFKHGPLHLIQGDFGPFVPQARSKVPLWLAITLKKRQKCQIACPPFMSVSYLDQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIDEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLY 537
AE+EF+AEDELI IVP F+ +H++ GDFGPF PQ KVPLWLA++LKKR+KC + P +M+V L +VL ERE VF LP HY+EI+ LL + A +D+ + ++RTL+ED+ NVR K+ G+ + + AVK+N++ AME+ +R FF +AL Y
Sbjct: 1 AEMEFLAEDELISIVPNFRSDGMHMLCGDFGPFRPQIPVKVPLWLALSLKKRRKCTLQTPDWMNVDNLARVLEEERESTGVFQELPFHYIEISQLLFDNAIEDLCDHYKMRTLIEDIRNVRFNKIQNGL-QQLEGKKNAVKLNNVSAMEINIIRPFFIKALERFY 164
BLAST of mRNA_P-fluviatile_contig8.14526.1 vs. uniprot
Match: UPI001FB0930E (DNA replication complex GINS protein PSF2 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0930E) HSP 1 Score: 158 bits (400), Expect = 1.520e-44 Identity = 89/183 (48.63%), Postives = 120/183 (65.57%), Query Frame = 1
Query: 28 AQVTAAELEFIAEDELIEIVPKFKHGPLHLIQGDFGPFVPQARSKVPLWLAITLKKRQKCQIACPPFMSVSYLDQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIDEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLYIIS---GQKTADQ 567
++ +AAELEF+AEDE+IEIVP K G L+ I GD GPF PQ +KVPLWLA+ LKKR KC I P +MSV L QVL ER+D AV PLP HY+EI+ LL + A DDI + VR+L+ED+++VR K+ G+ ++ A+K ++ AME+ VR F + L + Y + GQ AD+
Sbjct: 10 SEFSAAELEFLAEDEMIEIVPNMKMGTLNFICGDLGPFHPQLAAKVPLWLAVALKKRGKCTIQPPEWMSVDKLTQVLEAERDDKAVCQPLPFHYVEISRLLFDHARDDIADVYMVRSLIEDIKDVRFHKIGTGLEKISERTS-ALKFKNVSAMEVNIVRPFVVKTLETFYKLDSPDGQDVADR 191
BLAST of mRNA_P-fluviatile_contig8.14526.1 vs. uniprot
Match: A0A1U7ZHH4_NELNU (DNA replication complex GINS protein PSF2 n=5 Tax=Proteales TaxID=232378 RepID=A0A1U7ZHH4_NELNU) HSP 1 Score: 157 bits (397), Expect = 3.290e-44 Identity = 90/197 (45.69%), Postives = 122/197 (61.93%), Query Frame = 1
Query: 25 LAQVTAAELEFIAEDELIEIVPKFKHGPLHLIQGDFGPFVPQARSKVPLWLAITLKKRQKCQIACPPFMSVSYLDQVLRREREDAAVFTPLPHHYLEIASLLLNTASDDIDEPDRVRTLLEDVENVRRAKMYEGMGSAAQEVQQAVKVNDLGAMELLPVRSFFAEALASLY------IISGQKTADQRARDLEERLP 597
L+ +AAE+EF+AEDE++EIVP K GPL+ I GDFGPF PQ ++VPLWLA+ LKKR KC I P ++SV L QVL ER+ F PLP HY+EI+ LL + A DDI + VR+L+ED+ VR +K+ G+ + + AVK+ +L AME+ VR F L + Y +I TA R + +R P
Sbjct: 9 LSVFSAAEVEFLAEDEMVEIVPNMKMGPLNFICGDFGPFRPQIATEVPLWLAVALKKRGKCTIRPPQWLSVEKLTQVLEAERDSPREFQPLPFHYVEISRLLFDHARDDIPDVYMVRSLIEDIRYVRFSKVESGLETISGRTH-AVKLKNLSAMEVNIVRPFVVRTLQAFYKHDSPQMIQHPDTAANRPPQVADRGP 204 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14526.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14526.1 >prot_P-fluviatile_contig8.14526.1 ID=prot_P-fluviatile_contig8.14526.1|Name=mRNA_P-fluviatile_contig8.14526.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=255bp MPSVDAGGLAQVTAAELEFIAEDELIEIVPKFKHGPLHLIQGDFGPFVPQback to top mRNA from alignment at P-fluviatile_contig8:2305256..2307762- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14526.1 ID=mRNA_P-fluviatile_contig8.14526.1|Name=mRNA_P-fluviatile_contig8.14526.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2507bp|location=Sequence derived from alignment at P-fluviatile_contig8:2305256..2307762- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:2305256..2307762- >mRNA_P-fluviatile_contig8.14526.1 ID=mRNA_P-fluviatile_contig8.14526.1|Name=mRNA_P-fluviatile_contig8.14526.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1530bp|location=Sequence derived from alignment at P-fluviatile_contig8:2305256..2307762- (Porterinema fluviatile SAG_2381)back to top |