mRNA_P-fluviatile_contig8.14520.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14520.1 vs. uniprot
Match: A0A6H5KZY7_9PHAE (SnoaL-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY7_9PHAE) HSP 1 Score: 194 bits (493), Expect = 2.100e-56 Identity = 96/139 (69.06%), Postives = 112/139 (80.58%), Query Frame = 1
Query: 172 SLPGRLAPVRAVASRVGYAPTDVQGVWDNHFAAFGGKDMEKILLDYDESSVITTFDQTTDKKEVFEGLEGARKLFEGLFEALSDQSDLAAPMVQVDEAARLIFLIWRCPASGFLDATDTFLINDTTKKISRQNVAFRTG 588
SLP R A + + YAP+ VQ WDNHFAAF DME+ILLDYDE SV+TT+DQT DKK VF+G+EGAR LFEGLFEALSDQSDLAAP++ V E + ++FL+WRCPASGFLDATDTF ND TKKISRQNVA++TG
Sbjct: 40 SLPHRGA---TTSPTMAYAPSTVQDAWDNHFAAFAAHDMERILLDYDEDSVVTTYDQTADKKTVFKGVEGARTLFEGLFEALSDQSDLAAPVIDVSEESNMVFLVWRCPASGFLDATDTFTHNDKTKKISRQNVAYKTG 175
BLAST of mRNA_P-fluviatile_contig8.14520.1 vs. uniprot
Match: D7G623_ECTSI (SnoaL-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G623_ECTSI) HSP 1 Score: 189 bits (479), Expect = 4.820e-55 Identity = 88/122 (72.13%), Postives = 104/122 (85.25%), Query Frame = 1
Query: 223 YAPTDVQGVWDNHFAAFGGKDMEKILLDYDESSVITTFDQTTDKKEVFEGLEGARKLFEGLFEALSDQSDLAAPMVQVDEAARLIFLIWRCPASGFLDATDTFLINDTTKKISRQNVAFRTG 588
YAP+ VQ WDNHFAAF DM++ILLDYDE SV+TT+DQT D+ VF+G+EGAR LFEGLFEALSDQSDLAAP++ V E + ++FL+WRCPASGFLDATDTF ND TKKISRQNVA++TG
Sbjct: 3 YAPSTVQDAWDNHFAAFAAHDMDRILLDYDEDSVVTTYDQTADRISVFKGVEGARTLFEGLFEALSDQSDLAAPVIDVSEESNMVFLVWRCPASGFLDATDTFTHNDKTKKISRQNVAYKTG 124
BLAST of mRNA_P-fluviatile_contig8.14520.1 vs. uniprot
Match: A0A8J2SYK6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYK6_9STRA) HSP 1 Score: 125 bits (315), Expect = 2.100e-29 Identity = 63/118 (53.39%), Postives = 85/118 (72.03%), Query Frame = 1
Query: 238 VQGVWDNHFAAFGGKDMEKILLDYDESSVITTFDQTTDKKEVFEGLEGARKLFEGLFEALSDQSDLAAPMVQVDEA----ARLIFLIWRCPASGFLDATDTFLINDTTKKISRQNVAF 579
VQ WDNHFAAFG +D++K+L DY E SVI ++Q TD+ F+GL+G ++ F GLF+ LSD S LAAP ++V+EA A ++FL+WRCP+SG+ ATDTFL D KI++QNV
Sbjct: 139 VQASWDNHFAAFGAQDVDKVLKDYTEKSVIKVYNQVTDELVEFKGLKGVKECFTGLFKDLSDLSGLAAPAIRVEEATEDKAGMVFLVWRCPSSGYNHATDTFLF-DAAGKIAKQNVVI 255
BLAST of mRNA_P-fluviatile_contig8.14520.1 vs. uniprot
Match: A0A812STE6_9DINO (CasB protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812STE6_9DINO) HSP 1 Score: 117 bits (292), Expect = 1.130e-26 Identity = 64/146 (43.84%), Postives = 83/146 (56.85%), Query Frame = 1
Query: 151 AAFIAPVSLPGRLAPVRAVASRVGYAPTDVQGVWDNHFAAFGGKDMEKILLDYDESSVITTFDQTTDKKEVFEGLEGARKLFEGLFEALSDQSDLAAPMVQVDEAARLIFLIWRCPASGFLDATDTFLINDTTKKISRQNVAFRTG 588
AA AP P +AP+ A V Y P VQ WDNHF AFG +D++KI+LDYD++SV ++ K F G R +F LF LS+ L AP+V VDEA + +FL+W CP SG+ TDTF+ K I RQN+ G
Sbjct: 56 AAAAAPPMAPAGMAPMGAPGG-VPYFPRSVQAAWDNHFDAFGKQDLDKIMLDYDDTSVAKVYNNKDGSKSEFVGRVQIRNMFTNLFSDLSNLDTLKAPVVDVDEAGKTVFLVWECPGSGYHFGTDTFVFGPDNK-IKRQNIVVTKG 199
BLAST of mRNA_P-fluviatile_contig8.14520.1 vs. uniprot
Match: A0A812KSN4_9DINO (CasB protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812KSN4_9DINO) HSP 1 Score: 110 bits (275), Expect = 7.750e-25 Identity = 61/150 (40.67%), Postives = 81/150 (54.00%), Query Frame = 1
Query: 163 APVSLPGRLAPVRAVASRVGYAPT--------DVQGVWDNHFAAFGGKDMEKILLDYDESSVITTFDQTTDKKEVFEGLEGARKLFEGLFEALSDQSDLAAPMVQVDEAARLIFLIWRCPASGFLDATDTFLINDTTKKISRQNVAFRTG 588
APV+ G +A S G AP VQ WDNHF AFG +D++KI+LDYD++S+ ++ K F G R +F LF LS+ L AP+V VDEA + +FL+W CP G+ ATDTF+ K I RQN+ G
Sbjct: 5 APVAKAGSVAAAAPGGSVAGSAPVAAPYYFARSVQAAWDNHFEAFGKQDLDKIMLDYDDTSIAKVYNNKDGSKSEFVGKVQIRNMFTDLFADLSNLDTLKAPVVDVDEAGKTVFLVWECPGCGYHTATDTFVFGPDNK-IKRQNIVVTKG 153
BLAST of mRNA_P-fluviatile_contig8.14520.1 vs. uniprot
Match: A0A812Z7R4_9DINO (CasB protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812Z7R4_9DINO) HSP 1 Score: 109 bits (273), Expect = 4.520e-24 Identity = 61/150 (40.67%), Postives = 81/150 (54.00%), Query Frame = 1
Query: 163 APVSLPGRLAPVRAVASRVGYAPT--------DVQGVWDNHFAAFGGKDMEKILLDYDESSVITTFDQTTDKKEVFEGLEGARKLFEGLFEALSDQSDLAAPMVQVDEAARLIFLIWRCPASGFLDATDTFLINDTTKKISRQNVAFRTG 588
APV+ G +A AS G P VQ WDNHF AFG +D++KI+LDYD++S+ ++ K F G R +F LF LS+ L AP+V VDEA + +FL+W CP G+ ATDTF+ K I RQN+ G
Sbjct: 48 APVAKAGSVAAAAPGASVAGSPPIAAPYYFARSVQAAWDNHFEAFGKQDLDKIMLDYDDTSIAKVYNNKDGSKSEFVGKVQIRNMFTDLFADLSNLETLKAPVVDVDEAGKTVFLVWECPGCGYHTATDTFVFGPDNK-IKRQNIVVTKG 196
BLAST of mRNA_P-fluviatile_contig8.14520.1 vs. uniprot
Match: A0A813B714_SYMMI (CasB protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813B714_SYMMI) HSP 1 Score: 109 bits (272), Expect = 2.600e-22 Identity = 60/145 (41.38%), Postives = 80/145 (55.17%), Query Frame = 1
Query: 163 APVSLPGRLAPVRAVASRVGYAPT--------DVQGVWDNHFAAFGGKDMEKILLDYDESSVITTFDQTTDKKEVFEGLEGARKLFEGLFEALSDQSDLAAPMVQVDEAARLIFLIWRCPASGFLDATDTFLINDTTKKISRQNV 573
APV+ G +A S G AP VQ WDNHF AFG +D++KI+LDYD++S+ ++ K F G R +F LF LS+ L AP+V VDEA + +FL+W CP G+ ATDTF+ K I RQN+
Sbjct: 58 APVAKAGSVAAAAPGGSVAGSAPVAAPYYFARSVQAAWDNHFEAFGKQDLDKIMLDYDDTSIAKVYNNKDGSKSEFVGKVQIRNMFTDLFADLSNLDTLKAPVVDVDEAGKTVFLVWECPGCGYHTATDTFVFGPDNK-IKRQNI 201
BLAST of mRNA_P-fluviatile_contig8.14520.1 vs. uniprot
Match: A0A1Q9EQB8_SYMMI (Metacaspase-1B n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EQB8_SYMMI) HSP 1 Score: 109 bits (272), Expect = 9.810e-22 Identity = 60/145 (41.38%), Postives = 80/145 (55.17%), Query Frame = 1
Query: 163 APVSLPGRLAPVRAVASRVGYAPT--------DVQGVWDNHFAAFGGKDMEKILLDYDESSVITTFDQTTDKKEVFEGLEGARKLFEGLFEALSDQSDLAAPMVQVDEAARLIFLIWRCPASGFLDATDTFLINDTTKKISRQNV 573
APV+ G +A S G AP VQ WDNHF AFG +D++KI+LDYD++S+ ++ K F G R +F LF LS+ L AP+V VDEA + +FL+W CP G+ ATDTF+ K I RQN+
Sbjct: 48 APVAKAGSVAAAAPGGSVAGSAPVAAPYYFARSVQAAWDNHFEAFGKQDLDKIMLDYDDTSIAKVYNNKDGSKSEFVGKVQIRNMFTDLFADLSNLDTLKAPVVDVDEAGKTVFLVWECPGCGYHTATDTFVFGPDNK-IKRQNI 191
BLAST of mRNA_P-fluviatile_contig8.14520.1 vs. uniprot
Match: A0A6T7BC46_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7BC46_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 8.150e-13 Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 220 GYAPTDVQGVWDNHFAAFGGKDMEKILLDYDESSVITTFDQTTDKKEVFEGLEGARKLFEGLFEALSD 423
GY PT VQ WDNHF AFG ++++KI+LDYDE SV+ F + + F+G+E R F+GLF+ L+D
Sbjct: 34 GYKPTSVQEAWDNHFEAFGSQNLDKIMLDYDEKSVLRCFCHSDGADDTFKGVEEIRGFFDGLFKMLTD 101
BLAST of mRNA_P-fluviatile_contig8.14520.1 vs. uniprot
Match: A0A7S2VQM9_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2VQM9_9DINO) HSP 1 Score: 61.6 bits (148), Expect = 9.960e-7 Identity = 37/104 (35.58%), Postives = 55/104 (52.88%), Query Frame = 1
Query: 223 YAPTDVQGVWDNHFAAFGGKDMEKILLDYDESSVITTFDQTTDKKEVFEGLEGARKLFEGLFEALSDQSDLAAPMVQVDEAARLIFLIWRCPASGFLDATDTFL 534
YA + NH AA KDM+++L+DY E+S + + T + + GL R+L+ GL E L D SD+ A ++Q E + F W PA G+ DTF+
Sbjct: 74 YALATASEAFANHMAASATKDMDRLLMDYTETSRMRVYVGNTGEFNEYVGLANIRELYTGLLEDLGDASDVKA-LIQGRED-NMCFCAWESPAHGYTRCFDTFV 175 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14520.1 >prot_P-fluviatile_contig8.14520.1 ID=prot_P-fluviatile_contig8.14520.1|Name=mRNA_P-fluviatile_contig8.14520.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=164bp MYSPCVVTGLILCVQQTAAFIAPVSLPGRLAPVRAVASRVGYAPTDVQGVback to top mRNA from alignment at P-fluviatile_contig8:2227017..2230610+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14520.1 ID=mRNA_P-fluviatile_contig8.14520.1|Name=mRNA_P-fluviatile_contig8.14520.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3594bp|location=Sequence derived from alignment at P-fluviatile_contig8:2227017..2230610+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:2227017..2230610+ >mRNA_P-fluviatile_contig8.14520.1 ID=mRNA_P-fluviatile_contig8.14520.1|Name=mRNA_P-fluviatile_contig8.14520.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=984bp|location=Sequence derived from alignment at P-fluviatile_contig8:2227017..2230610+ (Porterinema fluviatile SAG_2381)back to top |