mRNA_P-fluviatile_contig8.14515.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14515.1 vs. uniprot
Match: D7G616_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G616_ECTSI) HSP 1 Score: 330 bits (847), Expect = 5.690e-94 Identity = 233/596 (39.09%), Postives = 267/596 (44.80%), Query Frame = 2
Query: 2 EESQLGVLRAMRETSRVWLDAALSAEWAAPSFPEPVPPRRLR--------VLAATRG----DKGEYVDQEIVDGRDWEGGWGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSGEGTLPAGAPLYRVLKVEEPADQRGGSD---------RPAVFRTVWGRVRVPAFVSPFARGAGLVGGWENASASVAGAAVGGDNGRGTIGADQQQQEQEYEDRENGTESGDNQTAATLEAGFVVRVPRCVALGERRPSAVVQYGHGLFNDRSEVEDGFLDEMAERGAWVLVAADWRGMSRVDLTVVARALVSRPELLLAGTPGDLMQGFVNQEAVLTLVSRRLGDFLGDGAIELSRKESEAVPLSFYGISQGAILGAGYTQFSSLIRRSXXXXXXXXXXXXXXXXVDFAAYHALLKLNVPSARDVRLLLSMLQMSWDRLEAAAWLAPDRGSDGNNRKTAADDDGSLVGRSKAVLMQAGTGDSEVSVIGTEILARAYRAVAVPPMAVTAWGIPSASESTDASCRDTTDTANSSSASLALYDYRREAAEVPDDDMPPPPGWVHMCVRHDPDAQQQVLRFLETGCVVNFCGGACERPFCR 1726
E QLGVLR+MRETS+ WL+AAL++ P+ + +PPR LR + A G D+G + E G EGG + + +G PA A LYRV+ VEE AD D PA+ RTVWGR+R PAF SP +RGAGL E T + +N + FVVRVPRCVALG +RP+A+VQYGHGLF DR+EVEDGFLD MAERGAWVLVAADWRGMSR+DL VVARALVS PELLLAGTP DLMQGFVNQEA LT+VSRRLGDFLGD A LS +E+ AVPL+FYGISQGAILGAGYT+FSSL VPDDD PPP GWVHMCVRHDPDA+QQVL F+ETGCVVNFC GACERP+CR
Sbjct: 648 EGGQLGVLRSMRETSKAWLEAALTST--GPTSAK-LPPRHLRESVDLSGGIPAGVAGHRDRDRGGFSGSE-GSGSGREGG---------------------------------RRRRVTSDGQQPASAALYRVVSVEESADYNNDGDDDGGGFNAEHPAIVRTVWGRLRAPAFTSPSSRGAGL------------------------------------ETTPTTTTANNND-----DVRFVVRVPRCVALGRKRPAALVQYGHGLFGDRAEVEDGFLDLMAERGAWVLVAADWRGMSRIDLAVVARALVSAPELLLAGTPEDLMQGFVNQEAALTVVSRRLGDFLGDRATPLSEEEARAVPLAFYGISQGAILGAGYTEFSSL------------------------------------------------------------------------------------------------------------------------------------------------------------------VPDDDTPPPWGWVHMCVRHDPDAEQQVLEFVETGCVVNFCRGACERPYCR 1003
BLAST of mRNA_P-fluviatile_contig8.14515.1 vs. uniprot
Match: A0A835Z5S3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5S3_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.650e-46 Identity = 126/324 (38.89%), Postives = 175/324 (54.01%), Query Frame = 2
Query: 350 PLYRVLKVEEPADQRGGSDRPAVFRTVWGRVRVPAFVSPFARGAGLVGGWENASASVAGAAVGGDNGRGTIGADQQQQEQEYEDRENGTESGDNQTAATLEAGFVVR------VPRCVALGERRPS---AVVQYGHGLFNDRSEVEDGFLDEMAERGAWVLVAADWRGMSRVDLTVVARALVSRPELLLAGTPGDLMQGFVNQEAVLTLVSRRLGDFLGDGAIELSRKESEAVPLSFYGISQGAILGAGYTQFSSLIRRSXXXXXXXXXXXXXXXXVDFAAYHALLKLNVPSARDVRLLLSMLQMSWDRLEAAAWLA----PDR 1282
PLY++++V+E V T WG V VPA+VSP R GL A+ G +V + G T Q D G+ LE GFVVR VPRC+A P+ AVVQYGHGLF DR+E+ DG+L ++A+ G W+ VA DWRGMSR DL VARAL+S P+ ++ +LMQ F+N +AV+ ++ R DF+ A LS + P F+G+SQG ++GAG++ FS ++R+ +DF AYHALL+ ++P AR RL +++ Q ++D LEA WLA PDR
Sbjct: 566 PLYKIVRVDEDPQS-------VVPVTFWGTVSVPAYVSPTHRAGGL----RRAALRKDGGSVNLNIGNATA------MRQAAADMLRHGPGGE-----ALEVGFVVRXXXXXXVPRCLAPNSTAPAGVTAVVQYGHGLFGDRAELLDGYLGKLADEGGWLTVATDWRGMSRFDLIFVARALLSDPDSIMEAMVDNLMQSFINMDAVMAVMERHWRDFVSPEAQALSA--ATPPPRVFHGVSQGGVIGAGFSAFSPRVQRASLGVPGAPFTMLLSRSLDFRAYHALLRASLPDARAFRLFMAVAQSAFDALEAPGWLAAAAPPDR 865
BLAST of mRNA_P-fluviatile_contig8.14515.1 vs. uniprot
Match: A0A7S0G843_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G843_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.030e-36 Identity = 112/339 (33.04%), Postives = 166/339 (48.97%), Query Frame = 2
Query: 716 VQYGHGLFNDRSEVEDG-FLDEMAERGAWVLVAADWRGMSRVDLTVVARALVSRPELLLAGTPGDLMQGFVNQEAVLTLVSRRLGDFLGDGAIELSRKESEAVPLS-------FYGISQGAILGAGYTQF---SSLIRRSXXXXXXXXXXXXXXXXVDFAAYHALLKLNVPSARDVRLLLSMLQMSWDRLEAAAWLAPDRGSDGNNRKTAADDDGSLVGRSKAVLMQAGTGDSEVSVIGTEILARAYRAVAVPPMAVTAWGIPSASESTDASCRDTTDTANSSSASLALYDYRREAAEVPDDDMPPPPGW-VHMCVRHDPDAQQQVLRFLETGCVVNFC 1696
V YGHGLF R E E+ FL EMA +++ A DWRGMS DL ++ + L+S P +L+QG+ N+ A+ L L ++ KE P + FYGISQG ILGAGY+ +SL+ ++ DF Y+ LL+LN+ + R VR++LS QM WD + A+ L+P + R VL+QAG GDSEV+ I +LARAY+A +P + +G+ S + + DT S+ + D R+ +P ++PP VH C+RHD QQQ++ F+ G +++ C
Sbjct: 1 VDYGHGLFASRYEAEESTFLHEMANSNGYLITAMDWRGMSLYDLPIIVKTLLSDPSFFQV-IRDNLIQGYSNKIALQHFAKHSL---LDKDWLKFETKEIYTQPTTYLQPKMIFYGISQGGILGAGYSALLGSTSLLDQAILGAPGTPFALVLTRSHDFIFYNYLLRLNLYNNRHVRIILSFFQMGWDSVGASGHLSPPLTDENIPR----------------VLIQAGFGDSEVTTISAAVLARAYKASLLPGHPIGVFGL-----SVEQAANDTFSGPKSAFTEILYEDDRQN---LPKTNVPPAKSTPVHQCIRHDARLQQQIVEFINNGRIIDPC 311
BLAST of mRNA_P-fluviatile_contig8.14515.1 vs. uniprot
Match: B7FPF3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPF3_PHATC) HSP 1 Score: 152 bits (385), Expect = 3.440e-34 Identity = 120/368 (32.61%), Postives = 170/368 (46.20%), Query Frame = 2
Query: 659 FVVRVP----RCVALGERRPS--AVVQYGHGLFNDRSEVEDGFLDEMAERGAWVLVAADWRGMSRVDLTVVARALVSRPELLLAGTPGDLMQGFVNQEAV-----LTLVSRRLGDFLGDGAIELSRKESEAVPLSFYGISQGAILGAGYTQFSS---LIRRSXXXXXXXXXXXXXXXXVDFAAYHALLKLNVPSARDVRLLLSMLQMSWDRLEAAAWLAPDRGSDGNNRKTAADDDGSLVGRSKAVLMQAGTGDSEVSVIGTEILARAYRAVAVPPMAVTAWGIPSASESTDASCRDTTDTANSSSASLALYDYRREAAEVPDDDMPPPPGWVHMCVRHDPDAQQQVLRFLETGCVVNFCGG-ACERP 1717
FVV +P + G + AV+++GHG+F R+E + FL +MA +++ A DWRGMS DL +A+ L+S PEL +L+QG+ + A+ L S F + E +E FYGISQG ILGAGY+ S LI R +DF Y ALL LN + R VR+ LS++QM+WD +E + LAP + +L+QAG GD+ VS + E LARA+ A +P +G+P S T + +L Y ++ +P DD+ P VH CVR D Q+ F+ TG VV+ C C RP
Sbjct: 509 FVVHIPCSIRSAILFGNETSNIRAVMEFGHGIFYSRAEAANDFLQQMAHENRYIITAMDWRGMSAFDLFTMAKTLLSTPELF-QSIRDNLIQGYAAKYALQEFSRACLWSMEWFSFGREVVKEDIMALTETTAYVFYGISQGGILGAGYSTLSGPTGLIDRGILSVPGTPFALILSRSLDFQGYDALLLLNFYNNRHVRIYLSLVQMAWDSVEGSGALAPP-----------------IRESFPRILLQAGLGDAVVSTVAAESLARAFGASTLPGNPRRVFGVPVNLPSNA--------TWAGPNVTLTELLYEKDLMSLPADDVFPRGNSVHFCVRKDAALINQLCEFINTGRVVDPCADDGCRRP 850
BLAST of mRNA_P-fluviatile_contig8.14515.1 vs. uniprot
Match: A0A2P6MZW1_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MZW1_9EUKA) HSP 1 Score: 137 bits (346), Expect = 2.040e-29 Identity = 105/359 (29.25%), Postives = 160/359 (44.57%), Query Frame = 2
Query: 659 FVVRVPRCVALGERRPSAVVQYGHGLFNDRSEVEDGFLDEMAERGAWVLVAADWRGMSRVDLTVVARALVSRPELLLAGTPGDLMQGFVNQEAVLTLVSR----RLGDFLGDGAIELSRKESEAVPLSFYGISQGAILGAGYTQFSSLIRRSXXXXXXXXXXXXXXXXVDFAAYHALLKLNVPSARDVRLLLSMLQMSWDRLEAAAWLAPDRGSDGNNRKTAADDDGSLVGRSKAVLMQAGTGDSEVSVIGTEILARAYRAVAVPPMAVTAWGIPSASESTDASCRDTTDTANSSSASLALYDYRREAAEVPDDDMPPPPGWVHMCVRHDPDAQQQVLRFLETGCVVNFCGGACERPFC 1723
F+V +P C + + PS V+QYGHGLF DR+E ++ A R W+LV+ DW G + DL + +S PE L++ +P + Q F+N +V+ ++ + LGDG + + ++ FYG S G I+G Y S +R F + AL L S R++RL+LS++Q +D +E W+ G K VL+ AG GD+ V+V+ E+L+R+ A + P GI S R T N +DY + + P H CVR +P+AQ+Q+ FL TG + FC G C + C
Sbjct: 560 FIVFIP-CSIIQDPSPSFVMQYGHGLFGDRTEALYHYVTIPANRHRWILVSQDWYGFGKFDLLQIVHDALSHPEALIS-SPDYVAQSFMNGVSVMRCLANSSFIQHPSMLGDGDVVVVGEQR-----GFYGNSFGGIVGGAYMGLSKDFQRGVLGVPGTPFTLLLTRSFLFLPFKALFHLEFYSWREIRLILSLVQTFFDPVETGGWVHDMAGG-------------------KQVLVHAGIGDARVAVVAAELLSRSLNASLITPETQKVPGIQS---------RKAPFTGNG----FVEWDYTDTIQPLSIIEPIPAETDTHECVRREPEAQKQIDVFLRTGVIEQFCEGRCVKETC 879
BLAST of mRNA_P-fluviatile_contig8.14515.1 vs. uniprot
Match: A0A7S1C2D6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2D6_9STRA) HSP 1 Score: 129 bits (324), Expect = 4.340e-27 Identity = 119/367 (32.43%), Postives = 166/367 (45.23%), Query Frame = 2
Query: 647 LEAGFVVRVPRC-VALGERRPSAVVQYGHGLFNDRSEVEDGFLDEMAERGAWVLVAADWRGMSRVDLTVVARALVSRPELLLAGTPGDLMQGFVNQEAVLTLVSRRLGDFL-----GDGAIELSRKESEAVPLSFYGISQGAILGAGYTQFSSLIRRSXXXXXXXXXXXXXXXXVDFAAYHALLKLNVPSARDVRLLLSMLQMSWDRLEAAAWLAPDRGSDGNNRKTAADDDGSLVGRSK-AVLMQAGTGDSEVSVIGTEILARAYRAVAVPPMAV----TAWGIPSASESTDASCRDTTDTANSSSASLALYDYRREAAEVPDDDMPPPPGW-VHMCVRHDPDAQQQVLRFLETGCVVNFCGGACE 1711
L+ F + +PR VA G P + YGHGLF ++EV+ G+LD+ A +VL A DW G+S D V L + A P QG +N ++ L+ L G I+ S+ +YG SQG ILGA Y S+ + R VDF+ LLKL PSA D +LL+ +QM WDRLE A +LA A D L K VLM G GD++V+ +G + +AR+ A + T +G+PS D A ++ ++A+ +VP D++PP + H VR + AQ RFL TG +VN CGGAC
Sbjct: 335 LKVDFTLLIPRSLVANGTAGPP--MSYGHGLFGAQNEVQSGYLDDEANEYGYVLAAVDWMGLSAYDEVAVTWMLANDISDF-AMVPDRCTQGMLNALLMMRLMKTGLAKHPALNPNGRAVIDTSKG-------LYYGNSQGGILGAVYMATSTDVTRGVLGVYGGPYGLLLPRSVDFSTLFLLLKLRYPSALDRMILLTAMQMLWDRLEPAGYLA-------------AISDEPLPNTPKHRVLMHYGLGDAQVTWLGAQTVARSVGASVFESNVLEGNCTRFGLPSVK-----------DGAVVTTGNVAVGWQFAGVPDVPFDNVPPDKQFDTHERVRREKTAQAMNARFLLTGEIVNTCGGACN 667
BLAST of mRNA_P-fluviatile_contig8.14515.1 vs. uniprot
Match: A0A7R9UGL4_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGL4_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.110e-24 Identity = 112/357 (31.37%), Postives = 165/357 (46.22%), Query Frame = 2
Query: 713 VVQYGHGLFNDRSEVEDGFLDEMAERGAWVLVAADWRGMSRVDLTVVARALVSRPELLLAGTPGDLMQGFVNQEAVLTLVSRRLGDFLGDGAIELSRKESEAVPLS------FYGISQGAILGAGYTQFSSLIRRSXXXXXXXXXXXXXXXXVDFAAYHALLKLNVPSARDVRLLLSMLQMSWDRLEAAAWL----APDRGSDGNNRKTAADDDGSLVGRSKAVLMQAGTGDSEVSVIGTEILARAYR------AVAVPPMAVTA-WGIPSASESTDASCRDTTDTANSSSASLALYD--YRREAAEVPDDDMPPPPGWVHMCVRHDPDAQQQVLRFLETGCVVNFCGGACERPFCR 1726
V+ +GHGLF+DR+E + E+A + ++VA DWRG+SR + VV RAL+ PELL +L+QGFV+ V+ V R GD + + ++ S ++ L+ FYG S G ILGAG R+ +F Y + +L V DVRL+LS+LQ+ +D + + A SD + T + DG + VL+ A GDS V +GTEI AR + A V A +G+P+ S S ++ T ++ Y E ++PDD+ PP G VH C+ D + Q FL G ++N C A CR
Sbjct: 169 VLFWGHGLFSDRAEALAEAVREVANKAETLVVALDWRGLSRHNFPVVMRALLREPELL-RPVASNLVQGFVSIATVVEWV--RSGDAVDPSFVSFLKRWSPSIELASDVELLFYGYSAGGILGAGLAGSVVPFDRAVLGAGGDPFTFLLSRSNNFRFYEQVFRLAVVDGFDVRLVLSLLQVFFDDISGVSSSTFTEADAADSDLISGVTNSRTDGRTTPQ---VLVFAALGDSNVPRLGTEISARDFNCSIFQEAFEVNDFQEDALYGLPNVSSSAESV------TFGDGDRGCVFFEMRYEEEFLDIPDDNGFPPDGEVHSCLPVDNEVQDTAAIFLRNGTILNTCDTALYPRGCR 513
BLAST of mRNA_P-fluviatile_contig8.14515.1 vs. uniprot
Match: L1JJR5_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JJR5_GUITC) HSP 1 Score: 120 bits (301), Expect = 5.510e-24 Identity = 112/363 (30.85%), Postives = 163/363 (44.90%), Query Frame = 2
Query: 647 LEAGFVVRVPRCVALGERRPSAVVQYGHGLFNDRSE-VEDGFLDEMAERGAWVLVAADWRGMSRVDLTVVARALVSRPELLLAGTPGDLMQGFVNQEAVLTLVSRRLGDFLGDGAIELSRKE--SEAVPLSFYGISQGAILGAGYTQFSSLIRRSXXXXXXXXXXXXXXXXVDFAAYHALLKLNVPSARDVRLLLSMLQMSWDRLEAAAWLAPDRGSDGNNRKTAADDDGSLVGRSKAVLMQAGTGDSEVSVIGTEILARAYRAVAVPPMAVTAWGIPSASESTDASCRDTTDTANSSSASLALYDYRREAAEVPDDDMPPPPGW-VHMCVRHDPDAQQQVLRFLETGCVVNFCGG-ACERPF 1720
++ F +P C L ++ ++ YGHG+ R+E V+ +L+ +A R +L A D+ GMS+ DL +V + L+S P LMQ FVN + + L + A + + E S + P FYG+S G +LGAGYT S + RS +DF +Y +LK+ V +RL LS++Q WD E++ WL+ + S G K L+QA GD++VS+IG +ILARA AV P +GI S A D T S+ A + Y P ++P H R D +QV FLETG + C C PF
Sbjct: 607 VDVQFASLIP-CSVLKRKKSEFILNYGHGILGTRAEAVQQRWLEGLANRTNSILFAVDFAGMSKFDLPIVFKILLSDLSAFKV-VPAQLMQSFVNGACGIWYLRNLLRT---NAAFKSAGSETISSSTPAYFYGVSMGGVLGAGYTLSSPYLTRSVLSVPGTPLALLLMRSLDFKSYLKILKIQVLRPTHLRLALSLMQQLWDPGESSGWLSHNE---------------SFAG--KRFLIQAAEGDAQVSIIGADILARALGAVRFPSPHHK-YGI-----SEIAPAEDGYLTGGSARALFTEF-YFDGVKPQPQLNLPAAEETDPHELPRRDGRGLRQVAAFLETGRFLQTCSADGCVGPF 940
BLAST of mRNA_P-fluviatile_contig8.14515.1 vs. uniprot
Match: A0A7S2S651_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S651_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.890e-23 Identity = 73/221 (33.03%), Postives = 107/221 (48.42%), Query Frame = 2
Query: 656 GFVVRVPRCVALGERRPSAVVQYGHGLFNDRSEVEDGFLDEMAERGAWVLVAADWRGMSRVDLTVVARALVSRPELLLAGTPGDLMQGFVNQEAVLTLVSRRLGDFLG-------------DGAIELSRKESEAVPLSFYGISQGAILGAGYTQF----SSLIRRSXXXXXXXXXXXXXXXXVDFAAYHALLKLNVPSARDVRLLLSMLQMSWDRLEAAAW 1267
G+V +P C + P +VQYGHG+F++RSEV D +L +A+R W LVA DWRGMSR DL VVARA++++PE T L Q FV+Q +L L L D ++ + +S ++F G+S G ILGAG+ ++ L R + F+ Y L L ++ L +LQ+ WD L+ + W
Sbjct: 15 GWVAVLP-CSVIARGSPREIVQYGHGVFDNRSEVTDSWLVALAQREEWALVATDWRGMSRFDLPVVARAMLAQPETF-RSTIDQLYQAFVDQFVLLRLAPVMTQWLLTWVDSKKHSIPMDQDMSLTVGPAQSTDANVTFVGVSNGGILGAGFVRWLDGLGGLRRAAIISAGSPFAGMVLTRSALFSLYQQALNLCFFDNASIQYFLYLLQLIWDPLDPSIW 233
BLAST of mRNA_P-fluviatile_contig8.14515.1 vs. uniprot
Match: A0A7S2JYE8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JYE8_9STRA) HSP 1 Score: 111 bits (278), Expect = 3.530e-23 Identity = 102/319 (31.97%), Postives = 144/319 (45.14%), Query Frame = 2
Query: 800 VLVAADWRGMSRVDLTVVARALVSRPELLLAGTPGDLMQGFVNQEAVLTLVSRRL------------GDFLGDGAIELSRKESEAVPLSFYGISQGAILGAGYTQF---SSLIRRSXXXXXXXXXXXXXXXXVDFAAYHALLKLNVPSARDVRLLLSMLQMSWDRLEAAAWLAPDRGSDGNNRKTAADDDGSLVGRSKAVLMQAGTGDSEVSVIGTEILARAYRAVAVPPMAVTAWGIPSASESTDASCRDTTDTANSS----SASLALYDYRREAAEVPDDDMPPPP-GWVHMCVRHDPDAQQQVLRFLETGCVVNFC 1696
V+V DWRGM+R DL V+ + L+SRP+ A +L+QGFVN+ V V +L + G+ +S E V FYG SQG ILGAGY F ++LI R+ + L N+ R R+LLS+ QM WD LEA+ LA + R VLMQ+G GDS V+ + TE LAR+YRA +P A +G+ D AN+ +L + +E E D + P VH CV D ++Q+++F++TG VV+ C
Sbjct: 1 VIVGVDWRGMTRYDLPVIIKCLMSRPDDFHA-VRDNLIQGFVNKLCVQYFVKNKLIKMDWFKFDVSNVENCGESNCTISEARPEYV---FYGNSQGGILGAGYNAFVGDANLISRTILGVPGTTFALVIGRSSILEKFKDFLLFNLYHHRHTRILLSLFQMGWDTLEASGLLAQPVNYNSIPR----------------VLMQSGVGDSVVANVATETLARSYRASLLPGNARQIFGL------------DVEQPANAEWDGPHTTLTELYFEQEVKESVDKRISIPDFNNVHHCVHRDSALKEQLIKFIDTGKVVDPC 287 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14515.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14515.1 >prot_P-fluviatile_contig8.14515.1 ID=prot_P-fluviatile_contig8.14515.1|Name=mRNA_P-fluviatile_contig8.14515.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=568bp MRETSRVWLDAALSAEWAAPSFPEPVPPRRLRVLAATRGDKGEYVDQEIVback to top mRNA from alignment at P-fluviatile_contig8:2189208..2196604- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14515.1 ID=mRNA_P-fluviatile_contig8.14515.1|Name=mRNA_P-fluviatile_contig8.14515.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7397bp|location=Sequence derived from alignment at P-fluviatile_contig8:2189208..2196604- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:2189208..2196604- >mRNA_P-fluviatile_contig8.14515.1 ID=mRNA_P-fluviatile_contig8.14515.1|Name=mRNA_P-fluviatile_contig8.14515.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3408bp|location=Sequence derived from alignment at P-fluviatile_contig8:2189208..2196604- (Porterinema fluviatile SAG_2381)back to top |