mRNA_P-fluviatile_contig8.14504.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14504.1 vs. uniprot
Match: D7G607_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G607_ECTSI) HSP 1 Score: 204 bits (520), Expect = 1.060e-58 Identity = 116/136 (85.29%), Postives = 126/136 (92.65%), Query Frame = 1
Query: 442 STPASSSASSYTVVKHPPVPGWEFPPVPAGCAPAFAVIRLGNTQYKVTKDDVIVAEKLEGDIGTTLEISDVLLVGTKDSTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTKGHRREVTLLRVMEISS 849
S+ A S S +TVVKHPP PGW+FPPVPAGC P FAVIRLGNTQ+KVTKDDVIVAEKL GD+GTTLE +DVLLVGT++STVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTT+GHRREVTLLRV+EISS
Sbjct: 141 SSSAPPSTSCHTVVKHPPAPGWDFPPVPAGCEPTFAVIRLGNTQHKVTKDDVIVAEKLVGDVGTTLETADVLLVGTRESTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTQGHRREVTLLRVVEISS 276
BLAST of mRNA_P-fluviatile_contig8.14504.1 vs. uniprot
Match: A0A835ZPR4_9STRA (Ribosomal protein L21-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPR4_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.320e-30 Identity = 69/125 (55.20%), Postives = 87/125 (69.60%), Query Frame = 1
Query: 475 TVVKHPPVPGWEFPPV-PAGCAPAFAVIRLGNTQYKVTKDDVIVAEKLEG-DIGTTLEISDVLLVGTKDSTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTKGHRREVTLLRVMEI 843
T+V H G PP+ P GCA FAVI+LG TQYKVT DDVI AEK++G DIG +++ DVLL+GT++ T VGRPTVPGA V++ VEE T+D+KV T+G RR+VT+LRVMEI
Sbjct: 58 TMVTHARPAGAPKPPIIPRGCAGRFAVIKLGGTQYKVTVDDVIAAEKVKGPDIGELIDVKDVLLLGTEERTWVGRPTVPGARVQMLVEEHTKDQKVVIFKMRRRKSSRRTRGFRRDVTVLRVMEI 182
BLAST of mRNA_P-fluviatile_contig8.14504.1 vs. uniprot
Match: A0A7S4A813_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A813_9STRA) HSP 1 Score: 120 bits (300), Expect = 2.470e-28 Identity = 70/111 (63.06%), Postives = 82/111 (73.87%), Query Frame = 1
Query: 517 PVPAGCAPAFAVIRLGNTQYKVTKDDVIVAEKLEGDIGTTLEISDVLLVGTKDSTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTKGHRREVTLLRVMEISS 849
P PA FA++RLG TQYK+TKDDVIVAEKL+ +G L I +VLLVG++ +TVVGRPTVP ATV VEEQTRD KV XXXXXXX GHRR VTLLRV++I +
Sbjct: 43 PAPASGGDRFAIVRLGGTQYKITKDDVIVAEKLDVQVGADLVIDEVLLVGSEAATVVGRPTVPRATVTCAVEEQTRDAKVVVFKKXXXXXXXXXNGHRRHVTLLRVLDIDA 153
BLAST of mRNA_P-fluviatile_contig8.14504.1 vs. uniprot
Match: A0A6G0XIU8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIU8_9STRA) HSP 1 Score: 100 bits (248), Expect = 8.000e-21 Identity = 56/133 (42.11%), Postives = 83/133 (62.41%), Query Frame = 1
Query: 448 PASSSASSYTVVKHPPVPGWEFPPVPAGCAPAFAVIRLGNTQYKVTKDDVIVAEKL-EGDIGTTLEISDVLLVGTKDSTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTKGHRREVTLLRVMEI 843
P S ++ +++V+HP V AG FAVI+LG TQ+KVT+ DV++AEK+ + +GT ++I +VLL+G+ + T+VGRP + GA V+ VEEQT DKK+ G+RREVT+LRV +
Sbjct: 50 PNSVKSAGFSIVRHPVNDATLIASVEAG--DVFAVIKLGATQFKVTQGDVVIAEKIIDAKVGTIMDIDEVLLIGSPNQTIVGRPFINGAIVQARVEEQTLDKKIDIFKKKRRKNYRRWNGYRREVTVLRVTNV 180
BLAST of mRNA_P-fluviatile_contig8.14504.1 vs. uniprot
Match: A0A067BSX2_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BSX2_SAPPC) HSP 1 Score: 99.4 bits (246), Expect = 8.060e-21 Identity = 56/141 (39.72%), Postives = 87/141 (61.70%), Query Frame = 1
Query: 424 ALAGSLSTPASSSASSYTVVKHPPVPGWEFPPVPAGCAPAFAVIRLGNTQYKVTKDDVIVAEKL-EGDIGTTLEISDVLLVGTKDSTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTKGHRREVTLLRVMEI 843
A A +TPAS +++V+HP AG FAV++LG TQYKVT+ DV++AEK+ + +GT +++++VLL+G+ + T++GRP + GA V+ VEEQT D+K+ G+RR+VT+LRV E+
Sbjct: 23 AFASDAATPAS-----FSIVRHPQTDATLSASAAAG--DIFAVVKLGCTQYKVTQGDVVIAEKIIDAKVGTIMDLNEVLLIGSPNQTIIGRPFITGAKVQARVEEQTLDEKIDIFKKKRRKNYRRWNGYRRQVTVLRVTEV 156
BLAST of mRNA_P-fluviatile_contig8.14504.1 vs. uniprot
Match: A0A485KQY3_9STRA (Aste57867_10640 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQY3_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.290e-20 Identity = 54/126 (42.86%), Postives = 79/126 (62.70%), Query Frame = 1
Query: 469 SYTVVKHPPVPGWEFPPVPAGCAPAFAVIRLGNTQYKVTKDDVIVAEKLEG-DIGTTLEISDVLLVGTKDSTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTKGHRREVTLLRVMEI 843
SY+VV+HP V AG FAV++LG TQ+KVT+ DV++AEK+ G +G+ L++ VLL+G+ + T+VGRP + GA V+ VEEQT D+K+ G+RRE+T+LRV +
Sbjct: 39 SYSVVRHPVNDATLAASVEAG--DVFAVVKLGATQFKVTQGDVVIAEKIVGAKVGSILDLDQVLLIGSPNQTIVGRPLIDGAVVQARVEEQTLDEKIDIFKKKRRKNYRRWNGYRREITVLRVTNV 162
BLAST of mRNA_P-fluviatile_contig8.14504.1 vs. uniprot
Match: A0A397C0J3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C0J3_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.870e-20 Identity = 54/133 (40.60%), Postives = 84/133 (63.16%), Query Frame = 1
Query: 448 PASSSASSYTVVKHPPVPGWEFPPVPAGCAPAFAVIRLGNTQYKVTKDDVIVAEKL-EGDIGTTLEISDVLLVGTKDSTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTKGHRREVTLLRVMEI 843
PAS ++ ++VV+HP + AG FAV++LG TQ+KVT+ D+++AEK+ + +G+ L++++VLL+G+ + T++GRP V GA V+ VEEQT DKK+ G RREVT+LRV +
Sbjct: 34 PASIKSTGFSVVRHPVNDAALSVSLEAG--DVFAVVKLGGTQFKVTQGDIVIAEKIIDAKVGSILDLNEVLLIGSPNETIIGRPFVTGAVVQARVEEQTLDKKIDIFKKKRRKNYRRWNGFRREVTVLRVTNV 164
BLAST of mRNA_P-fluviatile_contig8.14504.1 vs. uniprot
Match: A0A3M7L3M0_AUXPR (Uncharacterized protein n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7L3M0_AUXPR) HSP 1 Score: 97.8 bits (242), Expect = 2.490e-20 Identity = 55/135 (40.74%), Postives = 79/135 (58.52%), Query Frame = 1
Query: 445 TPASSSA-SSYTVVKHPPVPGWEFPPVPAGCAPAFAVIRLGNTQYKVTKDDVIVAEKLEG-DIGTTLEISDVLLVGTKDSTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTKGHRREVTLLRVMEI 843
TPA+ + S+YT+++ + PP P FAV+ L TQYKVT +D IV E++ G D+ + + VLL GT D+T++GRP VPG TV VEEQ D KV TKGHR+ +T+LR++++
Sbjct: 12 TPAAEAVPSAYTLLRERVQEAYTVPP-----RPVFAVVELAGTQYKVTPNDTIVTERIPGVDVNDRITLDRVLLAGTADATIIGRPVVPGITVTAAVEEQFLDGKVLIFHKRRRKNSRRTKGHRQPLTMLRILDV 141
BLAST of mRNA_P-fluviatile_contig8.14504.1 vs. uniprot
Match: A0A8J2SBN5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SBN5_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 2.510e-20 Identity = 62/109 (56.88%), Postives = 70/109 (64.22%), Query Frame = -1
Query: 516 ISMTRSKVTSRLCPLVVLELLRRRFLSTMTFLSLVCSSTKSFTVAPGTVGLPTTVLSFVPTSSTSEISRVVPMSPSNFSATMTSSFVTLYCVFPRRITANAGAQPAGTG 842
+S TRS VT LCPL E RRRFL T T S VCSST TVA GTVG PTTV + +PTS TS +++ P S+FSAT+TSSFV LYCV PRR A AG G
Sbjct: 1 MSKTRSSVTCLLCPLRRREFWRRRFLKTTTLASRVCSSTAQVTVARGTVGRPTTVAASLPTSRTSSMTKSAPTWTSSFSATITSSFVILYCVPPRRTIAKRSPPDAGAG 109
BLAST of mRNA_P-fluviatile_contig8.14504.1 vs. uniprot
Match: A0A024GSU0_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GSU0_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.170e-19 Identity = 53/125 (42.40%), Postives = 77/125 (61.60%), Query Frame = 1
Query: 472 YTVVKHPPVPGWEFPPVPAGCAPA-FAVIRLGNTQYKVTKDDVIVAEKLEGDIGTTLEISDVLLVGTKDSTVVGRPTVPGATVKLFVEEQTRDKKVXXXXXXXXXXXXTTKGHRREVTLLRVMEI 843
+T+VKHP A + A FAVI+L TQYKVT+ DV++ EKL+ ++G+ L++ +VLLVG++ T+VG P + GA V+ VEEQT D+K+ G RR+VT+LRV +I
Sbjct: 39 HTIVKHPVED--------ANTSNAYFAVIKLSGTQYKVTEGDVVITEKLQANVGSYLDLDEVLLVGSQQETIVGHPLIHGAVVRARVEEQTLDEKIDIFKKKRRKNYRRWNGFRRQVTVLRVTDI 155 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14504.1 >prot_P-fluviatile_contig8.14504.1 ID=prot_P-fluviatile_contig8.14504.1|Name=mRNA_P-fluviatile_contig8.14504.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=202bp MHHSQQQHGSRSFSTNSSSMASASLSSGEDEAAPAPAPTATPAFASAGEGback to top mRNA from alignment at P-fluviatile_contig8:2084694..2089095+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14504.1 ID=mRNA_P-fluviatile_contig8.14504.1|Name=mRNA_P-fluviatile_contig8.14504.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4402bp|location=Sequence derived from alignment at P-fluviatile_contig8:2084694..2089095+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:2084694..2089095+ >mRNA_P-fluviatile_contig8.14504.1 ID=mRNA_P-fluviatile_contig8.14504.1|Name=mRNA_P-fluviatile_contig8.14504.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1212bp|location=Sequence derived from alignment at P-fluviatile_contig8:2084694..2089095+ (Porterinema fluviatile SAG_2381)back to top |