mRNA_P-fluviatile_contig8.14497.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14497.1 vs. uniprot
Match: A0A6H5JL00_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL00_9PHAE) HSP 1 Score: 214 bits (545), Expect = 2.440e-54 Identity = 104/127 (81.89%), Postives = 116/127 (91.34%), Query Frame = 3
Query: 507 FLVPKVATGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFE---VLFRVSMAILDLSKDHLMSLDFDGTVKYFNNFPEPSVLSPNVLLPSAAAVSMEDGELMYLELQVRQKEKLEVPSVTQLMLRPVL 878
F + VA GWFQTLFVYLHAMPR TVRRIWDWWLSSGDFE V FRVSMA+L+LS++HL++LD DGTV+YFNNFPEPSVLSP+VLLP+AAAV +EDGELMYLELQVRQ+EKLEVPSVTQLMLRPVL
Sbjct: 2379 FSIDMVAMGWFQTLFVYLHAMPRTTVRRIWDWWLSSGDFEASTVFFRVSMALLELSEEHLLALDVDGTVEYFNNFPEPSVLSPDVLLPAAAAVEVEDGELMYLELQVRQREKLEVPSVTQLMLRPVL 2505
BLAST of mRNA_P-fluviatile_contig8.14497.1 vs. uniprot
Match: D7G646_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G646_ECTSI) HSP 1 Score: 175 bits (443), Expect = 1.740e-41 Identity = 90/124 (72.58%), Postives = 102/124 (82.26%), Query Frame = 3
Query: 507 FLVPKVATGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVLFRVSMAILDLSKDHLMSLDFDGTVKYFNNFPEPSVLSPNVLLPSAAAVSMEDGELMYLELQVRQKEKLEVPSVTQLMLRPVL 878
F + VA GWFQTLFVYLHAMPRATV FRVSMA+L+LS++HL++LDFDGTV+YFNNFPE SVLSP+VLLP+AAAV +EDGELMYLELQVRQ+EKLEVPSVTQLMLRPVL
Sbjct: 2121 FSIDMVAMGWFQTLFVYLHAMPRATV---------------FFRVSMALLELSEEHLLALDFDGTVEYFNNFPELSVLSPDVLLPAAAAVEVEDGELMYLELQVRQREKLEVPSVTQLMLRPVL 2229
BLAST of mRNA_P-fluviatile_contig8.14497.1 vs. uniprot
Match: A0A397BCH5_9STRA (Rab-GAP TBC domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BCH5_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 5.490e-14 Identity = 35/95 (36.84%), Postives = 62/95 (65.26%), Query Frame = 3
Query: 531 GWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVLFRVSMAILDLSKDHLMSLDFDGTVKYFNNFPEP-SVLSPNVLLPSAAAVSMEDGELMYLEL 812
GWFQTLF+YL+A+PR ++ +WD +++ +++LFRV++A+L + + HL+ D ++ N F +L P+VLLP+A + + + +L L L
Sbjct: 9 GWFQTLFLYLNALPRHSIDNMWDIFMAEKSWKILFRVALALLSMCEAHLLQQPIDSASRFLNTFATHLPMLEPHVLLPTALRIKVTNRQLANLSL 103
BLAST of mRNA_P-fluviatile_contig8.14497.1 vs. uniprot
Match: A0A3L6VK40_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VK40_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 3.290e-13 Identity = 35/95 (36.84%), Postives = 62/95 (65.26%), Query Frame = 3
Query: 531 GWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVLFRVSMAILDLSKDHLMSLDFDGTVKYFNNFPEP-SVLSPNVLLPSAAAVSMEDGELMYLEL 812
GWFQTLF+YL+A+PR ++ +WD +++ +++LFRV++A+L + + HL+ D ++ N F +L P+VLLP+A + + + +L L L
Sbjct: 79 GWFQTLFLYLNALPRHSIDNMWDIFMAEKSWKILFRVALALLSMCEAHLLQQPIDSASRFLNTFATHLPMLEPHVLLPTALRIKVTNRQLANLSL 173
BLAST of mRNA_P-fluviatile_contig8.14497.1 vs. uniprot
Match: A0A835Z5A8_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5A8_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.410e-12 Identity = 48/114 (42.11%), Postives = 70/114 (61.40%), Query Frame = 3
Query: 522 VATGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVLFRVSMAILDLSKDHLMSLDFDGTVKYFNNFPEPSVLSPNVLLPSAAAVSMEDGELMYLELQVRQKEKLEVPSVTQLM 863
+A GWFQTL ++ MP A ++DWW+++G+ EVLFR ++A+L L L+ DF+G ++ F PEP VL LL +A A+ +E+G L+ E QVR +E VP LM
Sbjct: 1415 LALGWFQTL-LFEAPMPPAARAAVFDWWIATGEMEVLFRAALAMLQLYLPALVRCDFEG-IQAFWRSPEP-VLGGAALLRAARALPLEEGVLIGFEQQVRTRENAAVPLSRMLM 1525
BLAST of mRNA_P-fluviatile_contig8.14497.1 vs. uniprot
Match: A0A3R6XKF6_9STRA (Rab-GAP TBC domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XKF6_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 5.560e-12 Identity = 35/95 (36.84%), Postives = 62/95 (65.26%), Query Frame = 3
Query: 531 GWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVLFRVSMAILDLSKDHLMSLDFDGTVKYFNNFPEP-SVLSPNVLLPSAAAVSMEDGELMYLEL 812
GWFQTLF+YL+A+PR ++ +WD +++ +++LFRV++A+L + + HL+ D ++ N F +L P+VLLP+A + + + +L L L
Sbjct: 257 GWFQTLFLYLNALPRHSIDNMWDIFMAEKSWKILFRVALALLSMCEAHLLQQPIDSASRFLNTFATHLPMLEPHVLLPTALRIKVTNRQLANLSL 351
BLAST of mRNA_P-fluviatile_contig8.14497.1 vs. uniprot
Match: T0S344_SAPDV (Rab-GAP TBC domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S344_SAPDV) HSP 1 Score: 79.7 bits (195), Expect = 8.140e-12 Identity = 37/101 (36.63%), Postives = 62/101 (61.39%), Query Frame = 3
Query: 510 LVPKVATGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVLFRVSMAILDLSKDHLMSLDFDGTVKYFNNFPE-PSVLSPNVLLPSAAAVSMEDGELMYLE 809
+V GWFQTLF+YL+A+P+ T+ IWD +L ++++FR ++ +L L++ HLM D + + N F + PS+L LLP+A ++ + + L LE
Sbjct: 412 MVEMYIVGWFQTLFLYLNALPKETLDAIWDIFLFERSWKIMFRAALGMLKLAEPHLMGKSIDEMMVFLNTFGDNPSILHKTTLLPTALSIKVTNAMLKKLE 512
BLAST of mRNA_P-fluviatile_contig8.14497.1 vs. uniprot
Match: A0A397E0E7_9STRA (Rab-GAP TBC domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397E0E7_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 9.670e-12 Identity = 35/95 (36.84%), Postives = 61/95 (64.21%), Query Frame = 3
Query: 531 GWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVLFRVSMAILDLSKDHLMSLDFDGTVKYFNNFPEP-SVLSPNVLLPSAAAVSMEDGELMYLEL 812
GWFQTLF+YL+A+PR ++ +WD +++ +++LFRV++A+L + + HL+ D ++ N F +L P+VLLP+A + + + L L L
Sbjct: 254 GWFQTLFLYLNALPRHSIDNMWDIFMAEKSWKILFRVALALLSMCEAHLLQQPIDSASRFLNTFATHLPMLEPHVLLPTALRIKVTNRHLANLSL 348
BLAST of mRNA_P-fluviatile_contig8.14497.1 vs. uniprot
Match: A0A1V9ZXI3_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXI3_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 5.650e-11 Identity = 36/101 (35.64%), Postives = 65/101 (64.36%), Query Frame = 3
Query: 510 LVPKVATGWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVLFRVSMAILDLSKDHLMSLDFDGTVKYFNNF-PEPSVLSPNVLLPSAAAVSMEDGELMYLE 809
+V GWFQTLF+YL+A+P+ T+ +WD + +++++FRV++A+L LS+ HL+ D + + N F +P++L+ + LLP A ++ + + L LE
Sbjct: 410 MVEMYIVGWFQTLFLYLNALPKETLDSMWDIFTFERNWKIMFRVALAMLKLSEQHLIGKSIDEMMVFLNTFGDDPTILTKSKLLPVAFSLKVTNTMLKQLE 510
BLAST of mRNA_P-fluviatile_contig8.14497.1 vs. uniprot
Match: W4G6Z3_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G6Z3_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 9.730e-11 Identity = 34/95 (35.79%), Postives = 60/95 (63.16%), Query Frame = 3
Query: 531 GWFQTLFVYLHAMPRATVRRIWDWWLSSGDFEVLFRVSMAILDLSKDHLMSLDFDGTVKYFNNFPEP-SVLSPNVLLPSAAAVSMEDGELMYLEL 812
GWFQTLF+YL+A+PR ++ +WD +++ +++LFRV++A+L + + HL+ D ++ N F +L P VL+P+A + + + L L L
Sbjct: 290 GWFQTLFLYLNALPRHSIDNMWDIFMAEKSWKILFRVALALLSMCEAHLLQQPIDSASRFLNTFATHLPMLEPYVLVPTALRIKVTNRHLADLSL 384 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14497.1 >prot_P-fluviatile_contig8.14497.1 ID=prot_P-fluviatile_contig8.14497.1|Name=mRNA_P-fluviatile_contig8.14497.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=162bp MKFLFQEGKLMSVLSSPSPREPPIPLSLRRRCSLLGLFLVPKVATGWFQTback to top mRNA from alignment at P-fluviatile_contig8:1996738..2000129- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14497.1 ID=mRNA_P-fluviatile_contig8.14497.1|Name=mRNA_P-fluviatile_contig8.14497.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3392bp|location=Sequence derived from alignment at P-fluviatile_contig8:1996738..2000129- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:1996738..2000129- >mRNA_P-fluviatile_contig8.14497.1 ID=mRNA_P-fluviatile_contig8.14497.1|Name=mRNA_P-fluviatile_contig8.14497.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=972bp|location=Sequence derived from alignment at P-fluviatile_contig8:1996738..2000129- (Porterinema fluviatile SAG_2381)back to top |