mRNA_P-fluviatile_contig8.14483.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14483.1
Unique NamemRNA_P-fluviatile_contig8.14483.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig8.14483.1 vs. uniprot
Match: D8LKV0_ECTSI (High mobility group protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKV0_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 4.250e-113
Identity = 190/238 (79.83%), Postives = 204/238 (85.71%), Query Frame = 3 
Query:  237 QYEGDD-VTYEGDGGLVDDGGYDEAGEGEGAAGGASATPGKRRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNNLPEGSKVTEVMKGIAARWRELSEEEKAEWTAKAALDKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKLPYKTKANDDTMRYREAMTVWKDGGADALADHMAARGEADAALAKYEDDED 947
            QYEG++ V Y+GDGGL D G YD+  EG                  AYKKAP+APRRGRSAYVLFSMEARE+VKN LPEGSKVTEVMKGIAA+WRELSE +K EWTAKAA DKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMS+EEKLPY+TKA+DDT+RYREAMTVWKDGGADALA HMAARGE D A+ KYE+D D
Sbjct:    2 QYEGEEHVAYDGDGGL-DQGHYDDGSEGXXXXXXXXXXX-XXXXXXAYKKAPDAPRRGRSAYVLFSMEAREEVKNALPEGSKVTEVMKGIAAKWRELSETDKEEWTAKAAQDKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDTLRYREAMTVWKDGGADALASHMAARGETDGAVGKYEEDGD 237
[Close]
BLAST of mRNA_P-fluviatile_contig8.14483.1 vs. uniprot
Match: F0W3U4_9STRA (High mobility group protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0W3U4_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.710e-50
Identity = 88/167 (52.69%), Postives = 126/167 (75.45%), Query Frame = 3 
Query:  357 RRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNNLPEGSKVTEVMKGIAARWRELSEEEKAEWTAKAALDKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKLPYKTKANDDTMRYREAMTVW 857
            +++KR  KKAP AP+RG+S Y+LFSM+ RE++K+++P  +KVT+VM+ IA  W ++SE+EK  W + A +DK RYE+E++ YDGPL+VPNKRAKKDP APKRA SAFL +SQ MRP+L++  P+ KN D+SK LG+ W++ ++ +K PY  K  +D  RY+  M  W
Sbjct:   24 KKRKRLQKKAPGAPKRGKSPYILFSMDKREEIKSHMPADAKVTDVMRAIADAWSKMSEDEKQPWKSAAEVDKQRYEEEMASYDGPLRVPNKRAKKDPSAPKRASSAFLFYSQVMRPQLKKENPDLKNTDISKRLGEAWSKATDVQKAPYVEKEREDRSRYKREMEEW 190
[Close]
BLAST of mRNA_P-fluviatile_contig8.14483.1 vs. uniprot
Match: A0A7S2UYP1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYP1_9STRA)

HSP 1 Score: 177 bits (449), Expect = 3.990e-49
Identity = 93/181 (51.38%), Postives = 129/181 (71.27%), Query Frame = 3 
Query:  354 KRRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNNLPEGSKVTEVMKGIAARWRELSEEEKAEWTAKAALDKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKLPYKTKANDDTMRYREAMTVW---KDGGADALAD 887
            K+++KR++KKAP AP+R RS Y+LF+ E R +VK  L E  KVT+VMK +AA WR+L EE + E+ AKA +D+ R+++E+S+Y+GPLK+PN+RAKK+P APKRAMSAFLHFS   RP+L+E  P+  ++ +SK+LG  WN + +E K PY  K+  D  RYR  +  W   K  G   LAD
Sbjct:   17 KKKRKRSHKKAPGAPKRARSPYILFASEKRAEVKARLGENCKVTDVMKAVAALWRQLDEEGRKEFVAKAEMDRARFQEEMSIYEGPLKIPNRRAKKNPNAPKRAMSAFLHFSIEYRPKLKEQNPQLTHLQISKLLGDTWNALPQETKDPYVEKSRIDNQRYRAEIATWDGEKYDGQPKLAD 197
[Close]
BLAST of mRNA_P-fluviatile_contig8.14483.1 vs. uniprot
Match: A0A067C9M6_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C9M6_SAPPC)

HSP 1 Score: 175 bits (444), Expect = 5.030e-48
Identity = 87/167 (52.10%), Postives = 120/167 (71.86%), Query Frame = 3 
Query:  357 RRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNNLPEGSKVTEVMKGIAARWRELSEEEKAEWTAKAALDKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKLPYKTKANDDTMRYREAMTVW 857
            ++K+R  KKAP AP+RG+S Y+LFSM+ RE++K  +P  SKVT+VM+ IA  W ++SEEEKA W   A  DK RYE+E++ YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + + KN ++SK LG+ W + ++ +K P+  K  +D  RY+  M  W
Sbjct:   20 KKKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPPNSKVTDVMRAIADAWSKMSEEEKAPWKLSAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKAEHADMKNTEISKQLGEAWAKATKAQKAPFVEKEKEDRARYKREMEEW 186
[Close]
BLAST of mRNA_P-fluviatile_contig8.14483.1 vs. uniprot
Match: K3WVY6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVY6_GLOUD)

HSP 1 Score: 175 bits (443), Expect = 7.030e-48
Identity = 86/167 (51.50%), Postives = 122/167 (73.05%), Query Frame = 3 
Query:  357 RRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNNLPEGSKVTEVMKGIAARWRELSEEEKAEWTAKAALDKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKLPYKTKANDDTMRYREAMTVW 857
            +++KR  KKAP AP+RG+S Y+LFSM+ RED+K  +PE +KVT+VM+ IA  W ++S+++K  W A A  DK RYE+E++ YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + + KN ++SK LG+ W++ ++E+K P+  K   D  RY+  M  W
Sbjct:   21 KKRKRLQKKAPGAPKRGKSPYILFSMDKREDIKATMPENAKVTDVMRAIADAWAKMSDDDKQPWKAAAEADKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWSKATDEQKAPFVEKEKLDRARYKREMEEW 187
[Close]
BLAST of mRNA_P-fluviatile_contig8.14483.1 vs. uniprot
Match: A0A3R7KJP5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KJP5_9STRA)

HSP 1 Score: 175 bits (444), Expect = 9.100e-48
Identity = 88/169 (52.07%), Postives = 121/169 (71.60%), Query Frame = 3 
Query:  351 GKRRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNNLPEGSKVTEVMKGIAARWRELSEEEKAEWTAKAALDKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKLPYKTKANDDTMRYREAMTVW 857
            G +++KR  KKAP AP+RG+S Y+LFSME RE++K  +PE SKVT+VM+ IA  W ++S+E+K  W   A  DK RYE+E++ YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + + KN ++SK LG+ W + ++E+K P+  K   D  RY+  M  W
Sbjct:   22 GNKKRKRLQKKAPGAPKRGKSPYILFSMEKREEIKATMPENSKVTDVMRAIADAWGKMSDEDKQPWKVAAEADKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWAKATDEQKAPFVEKEKVDRARYKREMEEW 190
[Close]
BLAST of mRNA_P-fluviatile_contig8.14483.1 vs. uniprot
Match: A0A835ZA26_9STRA (High mobility group box domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA26_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.520e-47
Identity = 97/181 (53.59%), Postives = 127/181 (70.17%), Query Frame = 3 
Query:  360 RKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNNLPEGSKVTEVMKGIAARWRELSEEEKAEWTAKAALDKDRYEQELSVYDGPLKVPNKRA---------------------KKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKLPYKTKANDDTMRYR 839
            ++KR +KKAP AP R RSAYVLFS+  R++VK  LPEGSKVTE+M+ +AA WRE++E++++EW AKAA DK RY+ EL+ Y GPLK+PNKRA                     KKDP APKR MSAFL++SQ MRPRL+E YP+AK  D+SK+LG++W RM  ++K  Y TKA  +   Y+
Sbjct:  103 KRKRLFKKAPGAPTRARSAYVLFSLSKRQEVKAGLPEGSKVTEIMRRVAALWREMTEDQRSEWHAKAAEDKQRYQDELTTYQGPLKIPNKRAHKAMFEQPQPAYEANGRAKRAKKDPRAPKRPMSAFLYYSQVMRPRLKEQYPDAKAQDVSKILGEQWARMGPDDKKVYNTKAEHEIAIYK 283
[Close]
BLAST of mRNA_P-fluviatile_contig8.14483.1 vs. uniprot
Match: M4BDC0_HYAAE (Uncharacterized protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=M4BDC0_HYAAE)

HSP 1 Score: 173 bits (439), Expect = 6.870e-47
Identity = 86/169 (50.89%), Postives = 120/169 (71.01%), Query Frame = 3 
Query:  351 GKRRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNNLPEGSKVTEVMKGIAARWRELSEEEKAEWTAKAALDKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKLPYKTKANDDTMRYREAMTVW 857
            G +++KR  KKAP AP+RG+S Y+LFSME RE++K  +PE SKVT+VM+ IA  W ++ +++K  W   A  DK RYE+E++ YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + + KN ++SK LG+ W + ++E+K P+  K   D  RY+  M  W
Sbjct:   51 GGKKRKRLQKKAPGAPKRGKSPYILFSMEKREEIKATMPENSKVTDVMRAIADAWGKMGDDDKQPWKVAAEADKQRYEEEMAAYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWGKATDEQKAPFVEKEKVDRARYKREMEEW 219
[Close]
BLAST of mRNA_P-fluviatile_contig8.14483.1 vs. uniprot
Match: A0A024U6C4_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024U6C4_9STRA)

HSP 1 Score: 172 bits (436), Expect = 7.790e-47
Identity = 85/167 (50.90%), Postives = 119/167 (71.26%), Query Frame = 3 
Query:  357 RRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNNLPEGSKVTEVMKGIAARWRELSEEEKAEWTAKAALDKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKLPYKTKANDDTMRYREAMTVW 857
            ++K+R  KKAP AP+RG+S Y+LFSM+ RE++K  +   +KVT+VM+ IA  W ++SE+EKA W   A  DK RYE+E++ YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + E KN ++SK LG+ W + ++ +K P+  K  +D  RY+  M  W
Sbjct:   24 KKKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMAPNAKVTDVMRAIADAWSKMSEDEKAPWKTAAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKSEHQEMKNTEISKQLGEAWGKATKAQKAPFVEKEKEDRARYKREMEEW 190
[Close]
BLAST of mRNA_P-fluviatile_contig8.14483.1 vs. uniprot
Match: A0A5D6YAG9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAG9_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.130e-46
Identity = 85/167 (50.90%), Postives = 121/167 (72.46%), Query Frame = 3 
Query:  357 RRKKRAYKKAPNAPRRGRSAYVLFSMEAREDVKNNLPEGSKVTEVMKGIAARWRELSEEEKAEWTAKAALDKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKLPYKTKANDDTMRYREAMTVW 857
            +++KR  KKAP AP+RG+S Y+LFSM+ RE++K  +P+ SKVT+VM+ IA  W ++++E+K  W A A  DK RYE+E++ YDGPL+VPNKRAKK P APKRA SAFL +SQ MRPR++  + + KN ++SK LG+ W + ++E+K P+  K   D  RY+  M  W
Sbjct:   46 KKRKRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPDNSKVTDVMRAIADAWAKMTDEDKQPWKAAAESDKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWGKATDEQKAPFVEKEKLDRARYKREMEEW 212
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKV0_ECTSI4.250e-11379.83High mobility group protein n=2 Tax=Ectocarpus Tax... [more]
F0W3U4_9STRA2.710e-5052.69High mobility group protein putative n=2 Tax=Albug... [more]
A0A7S2UYP1_9STRA3.990e-4951.38Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A067C9M6_SAPPC5.030e-4852.10Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
K3WVY6_GLOUD7.030e-4851.50Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3R7KJP5_9STRA9.100e-4852.07Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A835ZA26_9STRA1.520e-4753.59High mobility group box domain-containing protein ... [more]
M4BDC0_HYAAE6.870e-4750.89Uncharacterized protein n=22 Tax=Peronosporaceae T... [more]
A0A024U6C4_9STRA7.790e-4750.90Uncharacterized protein n=4 Tax=Aphanomyces TaxID=... [more]
A0A5D6YAG9_9STRA1.130e-4650.90Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:1834490..1839759 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score351.3
Seed ortholog evalue3.7e-94
Seed eggNOG ortholog2880.D8LKV0
KEGG koko:K09273
EggNOG free text desc.DNA binding
EggNOG OGsCOG5648@1,KOG0381@2759
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000,ko03021
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHigh mobility group domain protein
Ec32 orthologEc-11_005660.1
Exons6
Model size1588
Cds size744
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14483.1prot_P-fluviatile_contig8.14483.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 1835803..1839145 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817239.2175944-UTR-P-fluviatile_contig8:1834489..18346811622817239.2175944-UTR-P-fluviatile_contig8:1834489..1834681Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1834490..1834681 +
1693571636.1738362-UTR-P-fluviatile_contig8:1834489..18346811693571636.1738362-UTR-P-fluviatile_contig8:1834489..1834681Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1834490..1834681 +
1622817239.2279959-UTR-P-fluviatile_contig8:1835764..18358021622817239.2279959-UTR-P-fluviatile_contig8:1835764..1835802Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1835765..1835802 +
1693571636.1854446-UTR-P-fluviatile_contig8:1835764..18358021693571636.1854446-UTR-P-fluviatile_contig8:1835764..1835802Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1835765..1835802 +
1622817239.28858-UTR-P-fluviatile_contig8:1839145..18397591622817239.28858-UTR-P-fluviatile_contig8:1839145..1839759Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1839146..1839759 +
1693571636.2525146-UTR-P-fluviatile_contig8:1839145..18397591693571636.2525146-UTR-P-fluviatile_contig8:1839145..1839759Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1839146..1839759 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817239.2399926-CDS-P-fluviatile_contig8:1835802..18360501622817239.2399926-CDS-P-fluviatile_contig8:1835802..1836050Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1835803..1836050 +
1693571636.1947646-CDS-P-fluviatile_contig8:1835802..18360501693571636.1947646-CDS-P-fluviatile_contig8:1835802..1836050Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1835803..1836050 +
1622817239.2499697-CDS-P-fluviatile_contig8:1837082..18371811622817239.2499697-CDS-P-fluviatile_contig8:1837082..1837181Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1837083..1837181 +
1693571636.2043495-CDS-P-fluviatile_contig8:1837082..18371811693571636.2043495-CDS-P-fluviatile_contig8:1837082..1837181Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1837083..1837181 +
1622817239.2598884-CDS-P-fluviatile_contig8:1838027..18382141622817239.2598884-CDS-P-fluviatile_contig8:1838027..1838214Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1838028..1838214 +
1693571636.2141018-CDS-P-fluviatile_contig8:1838027..18382141693571636.2141018-CDS-P-fluviatile_contig8:1838027..1838214Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1838028..1838214 +
1622817239.2695239-CDS-P-fluviatile_contig8:1838622..18387311622817239.2695239-CDS-P-fluviatile_contig8:1838622..1838731Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1838623..1838731 +
1693571636.2235544-CDS-P-fluviatile_contig8:1838622..18387311693571636.2235544-CDS-P-fluviatile_contig8:1838622..1838731Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1838623..1838731 +
1622817239.2790694-CDS-P-fluviatile_contig8:1839044..18391451622817239.2790694-CDS-P-fluviatile_contig8:1839044..1839145Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1839045..1839145 +
1693571636.2336156-CDS-P-fluviatile_contig8:1839044..18391451693571636.2336156-CDS-P-fluviatile_contig8:1839044..1839145Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1839045..1839145 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14483.1

>prot_P-fluviatile_contig8.14483.1 ID=prot_P-fluviatile_contig8.14483.1|Name=mRNA_P-fluviatile_contig8.14483.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=248bp
MQQYEGDDVTYEGDGGLVDDGGYDEAGEGEGAAGGASATPGKRRKKRAYK
KAPNAPRRGRSAYVLFSMEAREDVKNNLPEGSKVTEVMKGIAARWRELSE
EEKAEWTAKAALDKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFL
HFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSEEEKLPYKTKANDDTM
RYREAMTVWKDGGADALADHMAARGEADAALAKYEDDEDQDESLDRT*
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mRNA from alignment at P-fluviatile_contig8:1834490..1839759+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14483.1 ID=mRNA_P-fluviatile_contig8.14483.1|Name=mRNA_P-fluviatile_contig8.14483.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5270bp|location=Sequence derived from alignment at P-fluviatile_contig8:1834490..1839759+ (Porterinema fluviatile SAG_2381)
CCTGGATGTTCTAATTGCCACAGGGTCTCGTTCTCTCTCGTACTCTATAA
GACCCAGTTACCCCAAACCTACTTGCCTTTAGAGAAGAAGACCCATCCGC
CCGAGAGACCCACCCCCGCCGACAGCTGAGGGAGCCACCGACACCGTTAA
GACCGACTTCGCCTGATCGACACCTGATCCGCGGCACCCACCGTGAGTTT
CATCGGGTTGCAAGCGGCCCCTAGGGTCCACCTGCCCGTGCACAGCACAG
CTGATTTTGTCGTTCTGTCAGAGTGCAGCCGCGCGTTCCGCAAAAAAAAA
AAAAAGGATCTCGCGCGCTCTTGCACACACCCAACTCTCAATGCCCGTTA
TAATGACCCCCTATTCTCTCTCAATGTTACAGAGGCAGGGCGGGATCCTG
TTGCGGGGCCGTTAGCGCGCCAGACCCCTCATTTTTTTTATTTTGCCCCT
CTCCGCACACACCTCAAGCCAGCCCGTTGCCGAATCGTTTTTGACCCCCT
GCAAGCATCCCTTTCCCGCAGCAGCGCGCGCGTGCCAGTAGCGAACAGCT
TCGATAGGGTCCGCAATGTGTGCGGCAGCAAGGTTCACTTGTGCATCGGG
AAGCGGCGGTTGGCTCGAGGGTATCTGCCCTAGGCACAGCTGTTCACGTT
TACGCGCGGTCAAGCGCGCGACCCCCGATTTTGTCGGATGCATGAGAACT
CGCGAACCTCAAAACCAACTTGCACGGGACCGCAGTTTGTGTTCTGGTGC
TGTTTTATGACTGGCTTTCCGCCCCCTCCCCACCCCTCCCCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGAGTGTTACGTTTCT
TCATCTGCCCCTACTGCTGTCCCCACCCTGCATTCAGCAAGCCGGTTATT
CCGGTTGGCACGTTGACCTGCTACCTAGCGCGTTGTTGTGTTTCGCAGTG
ACAATTTTCCAGCGAGCGCGCGCACCGGGCGCGCAGGCAAACGCTAAGAG
AAATGGGGTTTGGGCAATCGCTCGTCGGATCGGAGAGAAAGAAGAAGAGA
GAAGCGAGACCGTAACATCCTACCTATCGACAACAATTTTGTGATCTCCT
CTGCTTTCACTATTACTACTTTTCCACCGTTACTGTTGCTTTGTGAACGA
AAACACACCCACGCTCATCATCAACACCACTCGTCACCCACCCACCCACA
CACCTACCCACCCACCCACCACCCACCCACTCACCCACCACCCACCTACC
CAACCACCCTACCACCTCGTTTCAGGAGCGAGAGAGGGAGAAGAAAAAGC
ACCAATTACGACCATGCAGCAGTATGAGGGAGACGACGTGACTTACGAAG
GGGACGGGGGCCTCGTGGACGACGGCGGATACGACGAGGCCGGCGAGGGC
GAGGGGGCCGCCGGCGGCGCCTCCGCCACGCCGGGCAAGCGCCGCAAGAA
GCGCGCCTACAAAAAAGCCCCCAACGCTCCCCGCAGGGGCAGGAGCGCCT
ACGTCCTCTTCTCCATGGAGGCCAGGGAAGACGTGAAGAACAACCTCCCG
GAAGGGTCCAAGTGAGTGTAGGAATCTCGATGCCCTCCCCCTTCGTCTCG
CTCTCTCCTGGTCCACACCTTACATGATCCGTGTGCCTCAAGAGGGAGAA
CCACCCGGTAAGGCTCGCAACTGAAATTAGTCACGTGCCTGAAGATGGTT
CACCCCTCACTCAACATACGGTACACACCGCGCCGGGGAGGGGGGGGGGC
GCCCGAGCGAAGCTGGAAGAAGGCAAACGGCAGTTGCACGCTTCGCGATC
GGCCCTTCGGGCAGACGGGAAACCCCGTCTCTGGGACCTATTCTGCCTAG
ACGAATGGCTGGGGTTCTGTTCGTTTCGAAAATTGTCTCAAGGGTTCGCG
TGATCACCTGCTTGATCCGTTTTCATCGGATTTCCAAACGATCGCCAAGG
CTGTACGAGGGGCGGCGGTGCGGGGATGAATGGGGAGAACGGAGCGTGTG
AAGGGGGGGGCATCCATGCACGCGCGCGTGGCTTCAAAATACTTTGGCTC
TTTCGTGTATGCCGGAAGCTCTATTTGTTCCGCTGGTTAAGGCTGCCGTC
TGTGAGCGAACTCGCCATTTCTCCGTCGACGCTCACGCTCTGGCCGCGGC
GACTTGGTCACGGCCAGTGCTGCCTCCTCGTGTCCCCGACGCTGTCGAGG
GCGGTGCACACCAGAAGTGCAGTCATTCGAAAACGAGCCTTGGTTCGCAT
GAAAGGATGCCTGCATGTCAGCGCCCCTCTCGCTCTCTCCCGCTGCAACC
AGTTGAAGTAGGCACAACTAACGGCTGGACGAGATCAAACCCAAATCATG
TTTATAAACACAGATTTTGGTATGAGCTCTTCTTATGCGATGAGGGGCGG
TAACACTTCACCACGCAGTCCCTGCCCTCGCTCAAACTCTGTCCCTGCTC
TTTTCGAGTCGTCTCCATTGACATCACTCCGGGAAGAATGCCACGCGCAC
AAATTGTAATGCCGCAGCATTCATGTCGTGACTCATGTTCTTTTTGTACA
CCTCGTACATTCTCATCCTACCTCCCGGGTCCAAATCAATCAGGGTAACG
GAGGTGATGAAGGGCATCGCGGCGCGGTGGAGGGAGCTCAGCGAGGAGGA
GAAGGCGGAGTGGACGGCCAAGGCCGCCTTGGACAAGGACCGGTATGGAG
AGGACGCTCGTTGCAGAGGGGGAGGGAGGGAGGGAGGGCAGGAAGAATGG
GAGTATGAATGCATGCATACCCTTACTGCAAGACTTTGGGGAGGGGAGGA
GAGGAAAGGGGAGGCTAACGGACGGGGCATGACTTTTGTCTTCTCGCGGG
TGATTCTTGTTTATACCTGTCACGTTTGTTTCTGGTTCCTATGCCTTGTG
GCTTACGAGAACCCGCCCCTCCTCTCCGTCGTCTGCTGTAGAACCTGAAC
TAGTGAAGTGTTTCTGCTGTTACATTAACGGGAACTCTCTCTCTCTCTCG
TCACTTTCTCGATGTTTCGGCAAAGCGTCGATCAGCATTACAGCACGGTG
GGTGCGTGGGTAAGGGGGTGAGAGCTGGAAGGACTTGACACGAAGCACTC
TCGACTAGCGTATGGTTGATACACCGTAGTGAAACGAAAAATTTTGTATC
TGGCACACGAAGCAGAGCAGCAATGAAACCCGCACTTGGCCCTGGACACA
CGACTTTCGACTGGCACTCCTCTACGCCATGAGCTGCAGTAGATCTTCGC
GAGATCGCGCCGCCCTGCCCTGGCCTTGGCTCACAACACGAGACCTCTTC
CTGTACGCGTGCTCAAGTTCGGTCGTCACTGCCATTTTCGACCTCCTTCT
CCCTTGTTCAAGCATACCCTCCTTTCCTCCTCTCCTCCCTCCTTCCATTT
TGGCTGTCCTTCGCCGCCCTGGGTGTCGATTTGTACTTATGGATGTCGTG
ACGTCATCCTCTGACGTCTTGTTCTCGATGTTTTCGCTGCTGCTGCCGCC
GCCGCTGCCGCTATGTTGGGCCGGTCCGCTCGCGACAGCTACGAGCAGGA
GCTGTCGGTGTACGACGGGCCGCTGAAGGTGCCCAACAAGAGGGCCAAGA
AGGATCCGCTCGCCCCCAAGCGAGCCATGAGCGCGTTCCTTCACTTCAGC
CAGTCCATGCGCCCCCGACTGCGCGAGACCTACCCGGAGGCGAAGAACAT
GGACATGTCCAAGATGCTGGGGCAGGTGAGTGGAGGCCCGGCGAGGCAAG
GAAGAGAGCGTGGCAAGGAGCAGGAGTGAACGGGGCTTGTCTCTGCTATT
GTTGCTGCTGTCGTCGCCGTCGTCGCGGTGGTTGTTCTTGGTTGTTTGTG
GCACTTCATTCGGCTTCGTCTAATGCTTTGTTCGTCGTCGTCGTCGTCAT
TGTCGTTGTTGGTGTGGGTTGTGGTTGCTTCTCTTGTTTCCGATGTATCT
TTTTTTTTTTGTTATTGTTTCTGGTCTGGCGCGCATTGTGCTGATGCTGG
TACTCAGGCTTTTTTTTGCGAGGCGCACGAATGAATGTCTTGCGTTCTTC
GATCATTGCTGCTTCTCGTCAACCAATGGCCCATGACGTGAAGTATGTCG
CTTGTTTTGCTGCGTTTGGTGCCGCCTGAACAGGAGTGGAACCGCATGTC
TGAGGAGGAGAAACTGCCATATAAGACCAAGGCAAACGACGATACGATGC
GGTACCGCGAGGCTATGACGGTGTGGAAGGACGGAGGAGCAGGTGTGTGT
ATACGTGTTCTGTCTTGTTTTCCATTCCTCGCCTTAATTTGGTAGAACCA
CAAAGACCTACGCTACACCCGTGATGTATCTTTATCTTAGCCACGTTTCT
GGCACTTTGATGCCGGATTTTGCTTAAAACCGTTGCCTTTGCAAGGCTCG
TCAATTTTTCTTGGCCTTTTCTTTTCGCATGGCATGAGACCATGACCATT
CAATGCGCCACATAACTTACGTTGCCATATTGCTGTGGTCGGCGCATCAC
GTTTGTGTCCGTTCCTGTCCTGTCCTGTCCGACGGCGCCTCGTCTCACCG
GCAAGACGCGCTCGCGGACCATATGGCGGCAAGGGGGGAAGCAGATGCCG
CGTTGGCGAAGTACGAGGATGATGAGGACCAAGACGAGAGCCTGGATAGA
ACATAATAGACCGTTGCCGAGATTCGGGCGCCAAAAAATCGCGAGCCCGA
CGCCTGGGGGTTGGTGTTCGGCCAGCCGGGCGATGCGAGGAATTAGCGGG
TGGGGGAACGGGAGGGCGTTCTCTTTGCCTAGGCTGTGGGCCCGGGGGAA
CGGGGCTGTGGGCTGTAGGTTAACCTGTTGTTTGAGGGCGGAAAGGATGA
GGAGATGGTAAAGTATGAAACAGAATACAGCAGCGATATTCCACTTGGGT
GTGAGGATGGCAAAGTGCTGCGGCTGGCGAGCGAGGAAAGCGAGGGCCTC
TCTTCTTGTTCTACTTAGCTTCCCACCCTAGAGAGGAAGCGGTCTCCCGC
TCCCGCGCCATCCACGCTTGTCTTCTTTCGTGCGTACATTCCAATCGCGA
ATTGATCAAGTGCGATGCACGGACGTTTCGCGTTGCGTGGTGTTCCGGCT
TGTCCTGGTCGTAGCTCTGGTTTTCAAGTGCTGGTGGCATGCATGGCGAC
CCATTGAACGCCCGCCACATTCGAGCTACGCTCCGTCTCGGCTTCCTTCC
GTCCCCCTGTGTGGGTTGGTTCGGGGAGGGGATGAGGGTTTCCGCTGGCG
TCGCTTTTGGGGGTTTGGGG
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:1834490..1839759+

>mRNA_P-fluviatile_contig8.14483.1 ID=mRNA_P-fluviatile_contig8.14483.1|Name=mRNA_P-fluviatile_contig8.14483.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1488bp|location=Sequence derived from alignment at P-fluviatile_contig8:1834490..1839759+ (Porterinema fluviatile SAG_2381)
ATGCAGCAGTATGAGGGAGACGACGTGACTTACGAAGGGGACGGGGGCCT
CGTGGACGACGGCGGATACGACGAGGCCGGCGAGGGCGAGGGGGCCGCCG
GCGGCGCCTCCGCCACGCCGGGCAAGCGCCGCAAGAAGCGCGCCTACAAA
AAAGCCCCCAACGCTCCCCGCAGGGGCAGGAGCGCCTACGTCCTCTTCTC
CATGGAGGCCAGGGAAGACGTGAAGAACAACCTCCCGGAAGGGTCCAAAT
GCAGCAGTATGAGGGAGACGACGTGACTTACGAAGGGGACGGGGGCCTCG
TGGACGACGGCGGATACGACGAGGCCGGCGAGGGCGAGGGGGCCGCCGGC
GGCGCCTCCGCCACGCCGGGCAAGCGCCGCAAGAAGCGCGCCTACAAAAA
AGCCCCCAACGCTCCCCGCAGGGGCAGGAGCGCCTACGTCCTCTTCTCCA
TGGAGGCCAGGGAAGACGTGAAGAACAACCTCCCGGAAGGGTCCAAGGTA
ACGGAGGTGATGAAGGGCATCGCGGCGCGGTGGAGGGAGCTCAGCGAGGA
GGAGAAGGCGGAGTGGACGGCCAAGGCCGCCTTGGACAAGGACCGGGTAA
CGGAGGTGATGAAGGGCATCGCGGCGCGGTGGAGGGAGCTCAGCGAGGAG
GAGAAGGCGGAGTGGACGGCCAAGGCCGCCTTGGACAAGGACCGCTACGA
GCAGGAGCTGTCGGTGTACGACGGGCCGCTGAAGGTGCCCAACAAGAGGG
CCAAGAAGGATCCGCTCGCCCCCAAGCGAGCCATGAGCGCGTTCCTTCAC
TTCAGCCAGTCCATGCGCCCCCGACTGCGCGAGACCTACCCGGAGGCGAA
GAACATGGACATGTCCAAGATGCTGGGGCAGCTACGAGCAGGAGCTGTCG
GTGTACGACGGGCCGCTGAAGGTGCCCAACAAGAGGGCCAAGAAGGATCC
GCTCGCCCCCAAGCGAGCCATGAGCGCGTTCCTTCACTTCAGCCAGTCCA
TGCGCCCCCGACTGCGCGAGACCTACCCGGAGGCGAAGAACATGGACATG
TCCAAGATGCTGGGGCAGGAGTGGAACCGCATGTCTGAGGAGGAGAAACT
GCCATATAAGACCAAGGCAAACGACGATACGATGCGGTACCGCGAGGCTA
TGACGGTGTGGAAGGACGGAGGAGCAGGAGTGGAACCGCATGTCTGAGGA
GGAGAAACTGCCATATAAGACCAAGGCAAACGACGATACGATGCGGTACC
GCGAGGCTATGACGGTGTGGAAGGACGGAGGAGCAGACGCGCTCGCGGAC
CATATGGCGGCAAGGGGGGAAGCAGATGCCGCGTTGGCGAAGTACGAGGA
TGATGAGGACCAAGACGAGAGCCTGGATAGAACATAAACGCGCTCGCGGA
CCATATGGCGGCAAGGGGGGAAGCAGATGCCGCGTTGGCGAAGTACGAGG
ATGATGAGGACCAAGACGAGAGCCTGGATAGAACATAA
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