mRNA_P-fluviatile_contig8.14482.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14482.1
Unique NamemRNA_P-fluviatile_contig8.14482.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig8.14482.1 vs. uniprot
Match: D8LKV1_ECTSI (Coiled-coil domain-containing protein 94 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKV1_ECTSI)

HSP 1 Score: 457 bits (1176), Expect = 1.110e-154
Identity = 256/288 (88.89%), Postives = 263/288 (91.32%), Query Frame = 3
Query:  579 MSTLAAARADNMYYPPEWRPEYGGISKFQGSKGHNQYEQYGKIRFELPVHGWCLGCGRHIGRGTRFNATKDQAGTYYSTKIWQFSMKCPSCSTVMVIKTDPKNTDYEYVEGIRKKDMAFDPEEAETQRVQDSEVSNKLAVDPLYRLEHEQADKRRAASRKTVLTRLTELADAHGQDDYSSNARLRKGMRARKXXXXXXXXXXXXXXXXXXXXXPSPADVAAARVVKYRSRHKNFRTGEKAKMAAITGESIFGSGSESSEQARRKAVLIKAAKLGIKTRGLRLLRQADG 1442
            MSTLAAARADNMYYPPEWRPEYGGISKFQGS GHNQYE+YGKIRFELP HGWCLGCGRHIGRGTRFNATKDQAGTYYSTKIWQFSMKCPSCS VMVIKTDPKNT YEYVEGIRKKDM FDPEEAETQRVQDSEVS +LAVDPLYRLEHEQ DKRRAASRKTVLTRLTELADAH QDDYSSNARLR+ MRA  XXXXXXXXXXXXXXXXXXXXX        AR VKYRSRHK FRTGEKAKMAAITGESIFGSG ESSEQARRKAVL+KA+KLG+KTRG+RLLR   G
Sbjct:    1 MSTLAAARADNMYYPPEWRPEYGGISKFQGSNGHNQYEKYGKIRFELPDHGWCLGCGRHIGRGTRFNATKDQAGTYYSTKIWQFSMKCPSCSNVMVIKTDPKNTGYEYVEGIRKKDMEFDPEEAETQRVQDSEVSKQLAVDPLYRLEHEQRDKRRAASRKTVLTRLTELADAHAQDDYSSNARLRQTMRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSVKYRSRHKGFRTGEKAKMAAITGESIFGSGRESSEQARRKAVLVKASKLGLKTRGMRLLRPDQG 288          
BLAST of mRNA_P-fluviatile_contig8.14482.1 vs. uniprot
Match: A0A835Z9T3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9T3_9STRA)

HSP 1 Score: 248 bits (632), Expect = 5.100e-74
Identity = 125/253 (49.41%), Postives = 163/253 (64.43%), Query Frame = 3
Query:  579 MSTLAAARADNMYYPPEWRPEYGGISKFQGSKGHNQYEQYGKIRFELPVHGWCLGCGRHIGRGTRFNATKDQAGTYYSTKIWQFSMKCPSCSTVMVIKTDPKNTDYEYVEGIRKKDMAFDPEEAETQRVQDSEVSNKLAVDPLYRLEHEQADKRRAASRKTVLTRLTELADAHGQDDYSSNARLRKGMRARKXXXXXXXXXXXXXXXXXXXXXPSPADVAAARVVK--YRSRHKNFRTGEKAKMAAITGESIF 1331
            MS+LAA +AD  YYPP W P++G +SK  GSKG NQYEQYG IRFELP + WC GCGR +G+GTRFNA K++AG Y++T +W F M+CPSCST  VIKTDPKN+DYE+  GIR+K+  FD E+AE   + D +   +LA DP+YRLEH  AD RRA ++KT +TRL + ++     DY +NA LR+  R  +                      S AD AAAR +   + SR +  R  EK+++AAI   SIF
Sbjct:    1 MSSLAAVQADGFYYPPTWEPKHGSVSKAAGSKGSNQYEQYGVIRFELPYNAWCEGCGRPLGKGTRFNAKKEKAGAYFTTTVWAFHMRCPSCSTEFVIKTDPKNSDYEFSAGIRRKEQHFDAEDAEAPVLADEDTQARLATDPMYRLEHADADVRRADAKKTRITRLMDWSNDVRGSDYDANAALRRAWRGARRERVALEAEAQARGLGVELLPHSEADAAAARAMDLGHSSRLRTMRATEKSRLAAIRASSIF 253          
BLAST of mRNA_P-fluviatile_contig8.14482.1 vs. uniprot
Match: A0A7S3H3M3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3M3_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.150e-60
Identity = 106/195 (54.36%), Postives = 134/195 (68.72%), Query Frame = 3
Query:  579 MSTLAAARADNMYYPPEWRPEYGGISKFQGSKGHNQYEQYGKIRFELPVHGWCLGCGRHIGRGTRFNATKDQAGTYYSTKIWQFSMKC--PSCSTVMVIKTDPKNTDYEYVEGIRKKDMAFDPEEAETQRVQDSEVSNKL-AVDPLYRLEHEQADKRRAASRKTVLTRLTELADAHGQDDYSSNARLRKGMRARK 1154
            MS+LAAARADN Y+PPEW P+ GGISKFQGSKG NQYEQ G IRFELP  GWCLGCG H+ +G RFNA K++ G Y++T+IW F MKC   SC+    I TDPKN  Y++ EGIRK +  F P+  ++  V  S+ + +L A DP++RL+H + D++R  S K  L  LTEL D H ++ Y  NA LR   R RK
Sbjct:    1 MSSLAAARADNFYFPPEWTPQMGGISKFQGSKGANQYEQKGIIRFELPFDGWCLGCGVHMTKGLRFNAKKEKEGKYFTTQIWSFHMKCFSTSCTQKYKILTDPKNCTYDFAEGIRKHEQDFTPDVDDSLIVATSDETKQLIANDPMFRLQHNEEDRKRVLSAKEHLEALTELQDEHHKNYYDVNAMLRNKNRKRK 195          
BLAST of mRNA_P-fluviatile_contig8.14482.1 vs. uniprot
Match: C5YGN5_SORBI (Uncharacterized protein n=26 Tax=Poaceae TaxID=4479 RepID=C5YGN5_SORBI)

HSP 1 Score: 208 bits (529), Expect = 1.540e-59
Identity = 124/274 (45.26%), Postives = 155/274 (56.57%), Query Frame = 3
Query:  579 MSTLAAARADNMYYPPEWRPEYGGISKFQGSKGHNQYEQYGK-------IRFELPVHGWCLGCGRHIGRGTRFNATKDQAGTYYSTKIWQFSMKCPSCSTVMVIKTDPKNTDYEYVEGIRKKDMAFDPEEAETQRVQDSEVSNKLAVDPLYRLEHEQADKRRAASRKTVLTRLTELADAHGQDDYSSNARLRKGMRARKXXXXXXXXXXXXXXXXXXXXXPSPADVAAARVVKYRSRHKNFRTGEKAKMAAITGESIFGSGSESSEQARRKAVL 1379
            MS+LAAARADN YYPPEW P+ GG++KF G   H   E+  K       IRFE+P + WC GC   I +G RFNA K Q G YYSTKIW F+MK P C   +VI+TDPKNT+Y  + G +KK   FD E+AET  +   E  +KLA DP+YRLEH++ D R+    + VL RL  L+D+   DDY+ N  LR  +R++K                     PS AD AAA  VK+ SR   F    K K AAI   SIF   S S+   +   VL
Sbjct:    1 MSSLAAARADNFYYPPEWSPKKGGLNKFHGQ--HALRERARKLDQGILIIRFEMPFNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSPCCKHEIVIQTDPKNTEYVIISGAQKKTEDFDVEDAETLLLPADEDRDKLA-DPMYRLEHQEEDLRKKKEAEPVLVRLQRLSDSRHSDDYALNRALRDRLRSQKKRVAEEKKSARKMGLGVRLLPPSAADAAAAASVKFASR---FEKNRKDKRAAIKAASIFPESSSSASNCKLDLVL 268          
BLAST of mRNA_P-fluviatile_contig8.14482.1 vs. uniprot
Match: A0A2J6LV87_LACSA (Uncharacterized protein n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6LV87_LACSA)

HSP 1 Score: 207 bits (527), Expect = 5.860e-59
Identity = 126/285 (44.21%), Postives = 161/285 (56.49%), Query Frame = 3
Query:  582 STLAAARADNMYYPPEWRPEYGGISKFQGSKGHNQYEQYGK-------IRFELPVHGWCLGCGRHIGRGTRFNATKDQAGTYYSTKIWQFSMKCPSCSTVMVIKTDPKNTDYEYVEGIRKKDMAFDPEEAETQRVQDSEVSNKLAVDPLYRLEHEQADKRRAASRKTVLTRLTELADAHGQDDYSSNARLRKGMRARKXXXXXXXXXXXXXXXXXXXXXPSPADVAAARVVKYRSRHKNFRTGEKAKMAAITGESIFG----SGSESSE--QARRKAVLIKAAKL 1397
            STLAAARADN YYPPEW P+ GG++KF G   H   E+  K       IRFE+P H WC GC   I +G RFNA K Q G YYSTKIW F+MK P C  V+VI+TDPKN +Y  + G +KK   F+PE+AET  +Q  E  NKL VDP YRLEH++ D ++    + +L RL +++D+   DDYS N  LR  +R++K                     PS  D+ AA+ VK+ S   NF      K A I   SIF     S S+ SE    RR+    KA++L
Sbjct:   30 STLAAARADNFYYPPEWEPKKGGLNKFNGQ--HALRERARKLDQGILIIRFEMPYHIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKAPCCKHVIVIQTDPKNCEYLVISGAQKKVEEFEPEDAETMVLQVEEEKNKL-VDPFYRLEHQEEDLKKKKEAEPLLVRLQKVSDSRHLDDYSLNKSLRAKLRSQKKRVAEEETSARKMGLGIRLLPPSEQDIVAAKRVKFSS---NFNKNRDEKRALIKSSSIFSGVYSSNSKRSELEMKRRRINAPKASEL 308          
BLAST of mRNA_P-fluviatile_contig8.14482.1 vs. uniprot
Match: A0A3B5ZQ27_WHEAT (Uncharacterized protein n=17 Tax=Pooideae TaxID=147368 RepID=A0A3B5ZQ27_WHEAT)

HSP 1 Score: 204 bits (520), Expect = 3.440e-58
Identity = 120/258 (46.51%), Postives = 147/258 (56.98%), Query Frame = 3
Query:  579 MSTLAAARADNMYYPPEWRPEYGGISKFQGSKGHNQYEQYGK-------IRFELPVHGWCLGCGRHIGRGTRFNATKDQAGTYYSTKIWQFSMKCPSCSTVMVIKTDPKNTDYEYVEGIRKKDMAFDPEEAETQRVQDSEVSNKLAVDPLYRLEHEQADKRRAASRKTVLTRLTELADAHGQDDYSSNARLRKGMRARKXXXXXXXXXXXXXXXXXXXXXPSPADVAAARVVKYRSRHKNFRTGEKAKMAAITGESIF 1331
            MSTLAAARADN YYPPEW P+ GG++KF G   H   E+  K       IRFE+P + WC GC   IG+G RFNA K Q G YYSTKIW FSMK P C   +VI TDPKNT+Y  + G ++K   FD E+AET  +   E  +KLA DP+Y+LEH+  D R+    + VL RL  L+D+   DDYS N  LR  +R++K                     PS  D AAA  V++ S   NF    K K AAI   SIF
Sbjct:    1 MSTLAAARADNFYYPPEWSPKKGGLNKFHGQ--HALRERARKLDQGILIIRFEMPFNVWCGGCSSMIGKGVRFNAEKKQVGNYYSTKIWSFSMKSPCCQHEIVIHTDPKNTEYVIISGAQRKTEDFDVEDAETLLLPADEERDKLA-DPMYKLEHQGEDIRKKKEEEPVLVRLQRLSDSRHSDDYSLNRTLRDRLRSQKKRVAEEKKSARKMGLGVRLLPPSAEDAAAAARVRFAS---NFEKNRKDKRAAIKAASIF 252          
BLAST of mRNA_P-fluviatile_contig8.14482.1 vs. uniprot
Match: A0A482S855_9ARCH (DUF572 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S855_9ARCH)

HSP 1 Score: 199 bits (507), Expect = 6.350e-58
Identity = 100/186 (53.76%), Postives = 126/186 (67.74%), Query Frame = 3
Query:  579 MSTLAAARADNMYYPPEWRPEYGGISKFQGSKGHNQYEQYGKIRFELPVHGWCLGCGRHIGRGTRFNATKDQAGTYYSTKIWQFSMKCPSCSTVMVIKTDPKNTDYEYVEGIRKKDMAFDPEEAETQ-RVQDSEVSNKLAVDPLYRLEHEQADKRRAASRKTVLTRLTELADAHGQDDYSSNARLR 1133
            MS+LAA+RADN YYPPEWRPE GGISKFQGSKG NQYEQYG IRFELP   WCL C RH+G+G RFNA KD+AG Y+ST IW+F  KC SC    VI+T+P+++ Y+YVEG+RK +    P+EA+    V   EV  K A D ++RLE      ++  + K  L  L +L     + DY+ N+ LR
Sbjct:    1 MSSLAASRADNFYYPPEWRPEMGGISKFQGSKGKNQYEQYGIIRFELPFDAWCLKCKRHMGKGLRFNAKKDKAGKYFSTTIWEFKTKCYSCDQKFVIRTNPQDSTYDYVEGLRKHEQDAKPDEADGSIEVLSDEVKMKAATDAMFRLERGTETSQQVRTAKQRLEDLEDLQAEVYKQDYAMNSLLR 186          
BLAST of mRNA_P-fluviatile_contig8.14482.1 vs. uniprot
Match: J3LCB7_ORYBR (Uncharacterized protein n=4 Tax=BOP clade TaxID=359160 RepID=J3LCB7_ORYBR)

HSP 1 Score: 198 bits (504), Expect = 7.270e-56
Identity = 115/267 (43.07%), Postives = 151/267 (56.55%), Query Frame = 3
Query:  579 MSTLAAARADNMYYPPEWRPEYGGISKFQGSKGHNQYEQYGK-------IRFELPVHGWCLGCGRHIGRGTRFNATKDQAGTYYSTKIWQFSMKCPSCSTVMVIKTDPKNTDYEYVEGIRKKDMAFDPEEAETQRVQDSEVSNKLAVDPLYRLEHEQADKRRAASRKTVLTRLTELADAHGQDDYSSNARLRKGMRARKXXXXXXXXXXXXXXXXXXXXXPSPADVAAARVVKYRSRHKNFRTGEKAKMAAITGESIFGSGSESSEQ 1358
            MS+LAAARADN YYPPEW P+ GG++KF G   H   E+  K       IRFE+P + WC GC   I +G RFNA K Q G YYSTKIW F+MK P C   +VI+TDPKNT+Y  + G ++K   +D E+AET  +   E  +KLA DP+Y+LEH++ D R+    + VL RL  L+D+   DDY+ N  LR  +R++K                     PS  D  AA  VK+ S+   F    + K AAI   SIF   S S+ +
Sbjct:    1 MSSLAAARADNFYYPPEWSPKKGGLNKFHGQ--HALRERARKLDQGILIIRFEMPFNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSPCCKQEIVIQTDPKNTEYVIISGAQRKTEDYDVEDAETLLLPADEERDKLA-DPMYKLEHQEEDLRKKKEAEPVLVRLQRLSDSRHSDDYALNRALRDRLRSQKKRVAEERKSARKMGLGVRLLPPSAEDATAAAYVKFASK---FEKSRRDKRAAIKAASIFPESSSSTSK 261          
BLAST of mRNA_P-fluviatile_contig8.14482.1 vs. uniprot
Match: A0A2U1LRC3_ARTAN (CWC16 protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LRC3_ARTAN)

HSP 1 Score: 197 bits (500), Expect = 2.360e-55
Identity = 121/284 (42.61%), Postives = 159/284 (55.99%), Query Frame = 3
Query:  579 MSTLAAARADNMYYPPEWRPEYGGISKFQGSKGHNQYEQYGKI-------RFELPVHGWCLGCGRHIGRGTRFNATKDQAGTYYSTKIWQFSMKCPSCSTVMVIKTDPKNTDYEYVEGIRKKDMAFDPEEAETQRVQDSEVSNKLAVDPLYRLEHEQADKRRAASRKTVLTRLTELADAHGQDDYSSNARLRKGMRARKXXXXXXXXXXXXXXXXXXXXXPSPADVAAARVVKYRSRHKNFRTGEKA--KMAAITGESIFGSGSESSE--QARRKAVLIKAAKL 1397
            MSTLAAARADN YYPPEW P+ GG++KF G   H   E+  KI       RFE+P + WC GC   I +G RFNA K Q G YYSTKIW FSMK   C  ++VI+TDPKN +Y  + G +KK   FD E+AET  +   E  +KLA DP YRLEH++ D ++    + +L RL  ++D    DDYS N  LR  +R +K                      S  D+AAA+ VK+ S+    R  ++A  K A+I  +S + SGS+  E    RR+     A+KL
Sbjct:    1 MSTLAAARADNFYYPPEWEPKKGGLNKFNGQ--HALRERAKKIDQGILVIRFEMPYNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFSMKAACCQQLIVIQTDPKNCEYLVISGAQKKVEDFDNEDAETMALPVEEEKSKLA-DPFYRLEHQEQDLKKKKEAEPLLVRLQRVSDDRHLDDYSLNKSLRARLREQKKRVAEEEVTARKMGLGVRLLPASKEDLAAAKRVKFSSKFNKNRDDKRALIKSASIFSDSSYSSGSKRMELETKRRRINAASASKL 281          
BLAST of mRNA_P-fluviatile_contig8.14482.1 vs. uniprot
Match: A0A3L6G8J7_MAIZE (Coiled-coil domain-containing protein 130 n=1 Tax=Zea mays TaxID=4577 RepID=A0A3L6G8J7_MAIZE)

HSP 1 Score: 200 bits (509), Expect = 2.960e-55
Identity = 119/273 (43.59%), Postives = 152/273 (55.68%), Query Frame = 3
Query:  582 STLAAARADNMYYPPEWRPEYGGISKFQGSKGHNQYEQYGK-------IRFELPVHGWCLGCGRHIGRGTRFNATKDQAGTYYSTKIWQFSMKCPSCSTVMVIKTDPKNTDYEYVEGIRKKDMAFDPEEAETQRVQDSEVSNKLAVDPLYRLEHEQADKRRAASRKTVLTRLTELADAHGQDDYSSNARLRKGMRARKXXXXXXXXXXXXXXXXXXXXXPSPADVAAARVVKYRSRHKNFRTGEKAKMAAITGESIFGSGSESSEQARRKAVL 1379
            S+LAAARADN YYPPEW P+ GG++KF G   H   E+  K       IRFE+P + WC GC   I +G RFNA K Q G YYSTKIW F+MK P C   +VI+TDPKNT+Y  + G +KK   FD E+AET  +   E  +KLA DP+YRLEH++ D R+    + VL RL  L+D+   DDY+ N  LR  +R++K                     PS  D  AA  VK+ S+   F    + K AAI   SIF   S S+   +   VL
Sbjct:  119 SSLAAARADNFYYPPEWSPKKGGLNKFHGQ--HALRERARKLDQGILIIRFEMPFNIWCGGCNSMIAKGVRFNAEKKQVGNYYSTKIWSFTMKSPCCKHEIVIQTDPKNTEYVIISGAQKKTEDFDVEDAETLLLPADEDRDKLA-DPMYRLEHQEEDLRKKKEAEPVLVRLQRLSDSRHSDDYALNRALRDRLRSQKKRVAEEKKSARKIGLGVRLLPPSAEDATAAASVKFASK---FEKSRRDKRAAIKAASIFPESSSSASHGKPDLVL 385          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKV1_ECTSI1.110e-15488.89Coiled-coil domain-containing protein 94 n=2 Tax=E... [more]
A0A835Z9T3_9STRA5.100e-7449.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3H3M3_9STRA1.150e-6054.36Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
C5YGN5_SORBI1.540e-5945.26Uncharacterized protein n=26 Tax=Poaceae TaxID=447... [more]
A0A2J6LV87_LACSA5.860e-5944.21Uncharacterized protein n=3 Tax=Lactuca TaxID=4235... [more]
A0A3B5ZQ27_WHEAT3.440e-5846.51Uncharacterized protein n=17 Tax=Pooideae TaxID=14... [more]
A0A482S855_9ARCH6.350e-5853.76DUF572 domain-containing protein (Fragment) n=1 Ta... [more]
J3LCB7_ORYBR7.270e-5643.07Uncharacterized protein n=4 Tax=BOP clade TaxID=35... [more]
A0A2U1LRC3_ARTAN2.360e-5542.61CWC16 protein n=1 Tax=Artemisia annua TaxID=35608 ... [more]
A0A3L6G8J7_MAIZE2.960e-5543.59Coiled-coil domain-containing protein 130 n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:1830970..1834557 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score466.5
Seed ortholog evalue1e-128
Seed eggNOG ortholog2880.D8LKV1
KEGG koko:K13115
EggNOG free text desc.response to virus
EggNOG OGsCOG5134@1,KOG2990@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCWC16 protein
Ec32 orthologEc-11_005670.1
Exons4
Model size1543
Cds size963
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14482.1prot_P-fluviatile_contig8.14482.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 1830970..1833979 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817239.1432276-CDS-P-fluviatile_contig8:1830969..18313231622817239.1432276-CDS-P-fluviatile_contig8:1830969..1831323Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1830970..1831323 -
1693571636.0989418-CDS-P-fluviatile_contig8:1830969..18313231693571636.0989418-CDS-P-fluviatile_contig8:1830969..1831323Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1830970..1831323 -
1622817239.1545732-CDS-P-fluviatile_contig8:1831987..18321781622817239.1545732-CDS-P-fluviatile_contig8:1831987..1832178Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1831988..1832178 -
1693571636.1270819-CDS-P-fluviatile_contig8:1831987..18321781693571636.1270819-CDS-P-fluviatile_contig8:1831987..1832178Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1831988..1832178 -
1622817239.1645935-CDS-P-fluviatile_contig8:1832610..18328421622817239.1645935-CDS-P-fluviatile_contig8:1832610..1832842Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1832611..1832842 -
1693571636.139133-CDS-P-fluviatile_contig8:1832610..18328421693571636.139133-CDS-P-fluviatile_contig8:1832610..1832842Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1832611..1832842 -
1622817239.1789656-CDS-P-fluviatile_contig8:1833793..18339791622817239.1789656-CDS-P-fluviatile_contig8:1833793..1833979Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1833794..1833979 -
1693571636.149086-CDS-P-fluviatile_contig8:1833793..18339791693571636.149086-CDS-P-fluviatile_contig8:1833793..1833979Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1833794..1833979 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817239.1894023-UTR-P-fluviatile_contig8:1833979..18345571622817239.1894023-UTR-P-fluviatile_contig8:1833979..1834557Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1833980..1834557 -
1693571636.158749-UTR-P-fluviatile_contig8:1833979..18345571693571636.158749-UTR-P-fluviatile_contig8:1833979..1834557Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1833980..1834557 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14482.1

>prot_P-fluviatile_contig8.14482.1 ID=prot_P-fluviatile_contig8.14482.1|Name=mRNA_P-fluviatile_contig8.14482.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=321bp
MSTLAAARADNMYYPPEWRPEYGGISKFQGSKGHNQYEQYGKIRFELPVH
GWCLGCGRHIGRGTRFNATKDQAGTYYSTKIWQFSMKCPSCSTVMVIKTD
PKNTDYEYVEGIRKKDMAFDPEEAETQRVQDSEVSNKLAVDPLYRLEHEQ
ADKRRAASRKTVLTRLTELADAHGQDDYSSNARLRKGMRARKKREREREE
EATAKGLGIRLATPSPADVAAARVVKYRSRHKNFRTGEKAKMAAITGESI
FGSGSESSEQARRKAVLIKAAKLGIKTRGLRLLRQADGGGDRGGGDRGGL
THRRAPGTHAASGASSSSAGM
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mRNA from alignment at P-fluviatile_contig8:1830970..1834557-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14482.1 ID=mRNA_P-fluviatile_contig8.14482.1|Name=mRNA_P-fluviatile_contig8.14482.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3588bp|location=Sequence derived from alignment at P-fluviatile_contig8:1830970..1834557- (Porterinema fluviatile SAG_2381)
GTTTGGGGTAACTGGGTCTTATAGAGTACGAGAGAGAACGAGACCCTGTG GCAATTAGAACATCCAGGCTCTTAAGGGAGCGCAATACATGTACCTTCCA ATAAACATTATGATCGTTCGTACACCCTTTTACCGAAAATCCCGCCGCAT ATGCTGCGACTCCCCCGTATTGACGCTACTCTGACCACTCTGACCACAGC AGCAGAGAAGACGGAGTCCTCGTGCAGCAACTCAGCCGAGAAAACTTAAG ACCTAGGAGGGGCTGGTGTTCTCTGTTGGGAGGGAACCAGGCGTGTTTTT CTTTTTGCATCTCGCAACCCTGCGACAACGAGGCTCAATCTCGAGGGAGG GGCAAGCAACGACCTCTCCTGACACGAGAGAGGGGCAGGAGAATTGTACT CAATTCACGCACGCTATCGCCGTTAGGCCATAGACCTTGCATCCCCACTT GGCCGGGAGAGAGCGATTTGCCGAGTTTTGCCAGCCTAGGATCACAGAGG GGGGAGGACAGTAATAATAGGAGTATTTTTTTATTTTTTCCGTAGTTTCA GCAGGACTTCTCTTCTCCCGCTGCGACCATGTCGACGCTCGCCGCCGCTC GCGCGGACAACATGTACTACCCTCCGGAGTGGAGGCCGGAGTACGGGGGC ATATCCAAGTTTCAGGGGTCGAAGGGCCACAACCAGTACGAGCAGTACGG CAAGATTCGGTTCGAGCTGCCCGTGCACGGGTGGTGCCTCGGCTGTGGGC GGCACATCGGCAGGGTGAGAGACCACGGTCGAGAGTAGAGGTGGTCAACT GTTTTGAGAGTAAGGATTCGATGCGGAGCGGTGTCGCGAGATGTAATTCG CGACGTCGAGACGTCGTGTTTTCTTCCGACGAGCCCTAACGACGCCAGTT GCCCTTGCAGCAGCAGCAGCAGTGCTGGCAATCTGCACAGATTTCCCAGC TAGCCCACCGGAGAGTGGTGGAGTACTGCGGAGTGTTTTGGAGGAGACTG AAACAGTGCGCGGGCAGAGGACTTGTAGAACAAATCCTCTTCCAGGCAAG ACAGTGGTGAACAGGCTACCGCCGCCGGCTGTGGGACGTGTGCGTCTACA TGTGGAACGTCAATCATTTTCAAAGGTCAATTTCTCAGCAACACAGAGAT TTATGATGGCCAAATGGGTGTGGTCGGAGAGATTAATCGATACCTTTCTG TAGATGTATCGCAAGTCATTTGGCACCATGCTTGATGTGGAGAAAAGCTT TGAAAATCGGTCCAGGGTGTGTGGTATCTTGTGTCGTATACGGTTGTCAG GACCAATTTAACAATCTGGGTGGCTATTAGATTATGATTATTAGAGCATG CGAGCGCAAATTGTTGGTAAGGCCTTCAAAATTCGACTTCGAAAACCAAA TGATCAAGTATCTGCTACAAACGTTACACCCCATAGTGCCCTTTCCATTT GCTCCATGTCATCCTGAGTACCGTGTGCCACCGTATCGATGCACGAAGGC ACCCCGCTCTATGTGACTACCTGTTGAAGCACCCGGATTATGGAGTGAGA CTTTCAACAAATCGGGTGCATATCGTAGTCAGACTTCACACGGTCCACCA TTGTGAGGCTTACCTGGAGGAATTTTTGCCGTCTATCGATGTTTCGAACT CCCACGAACAGTGGCCCGTCGCGCGCTCTAACGCACACACATACACGCCA CTCACAACCTTTCAGGGTACACGGTTCAACGCCACAAAGGACCAAGCGGG CACCTACTACAGCACCAAGATATGGCAGTTCTCCATGAAGTGCCCCTCCT GCAGCACAGTGATGGTCATCAAGACCGACCCCAAGAACACGGACTACGAG TACGTGGAGGGCATCCGCAAGAAGGATATGGCCTTCGATCCAGAGGAGGC CGAAACCCAGCGCGTGCAGGACAGCGAGGTTTCCAACAAGCTCGCAGGTG TGCTTGTGTGTGAATGTTTTGTGAAAAAGGGAGGCGGAGACGTTTGTAGC TCCTGCCTCAGTCTGCCCACAAAGATACGCCAGTCTCACCCCGCACAGGT ATGGTACATGCCCCGAAGTGGGTCTCACGACCGAAAGTCGTGTTGACCAA CCGAATGACACTGAAAATAAGTCAGAGTCTGTCGTACTTCGAAGTATGTG CGCGTTCGTGCCCAAGTAAGAGCTGAGCAGGTCTGGATCAGCTCGACATG CTCTCTATATTTCTCTATCTCTCTCTCGCTCTCTCTCTGTCGCTCGAACA AAATAAGGTTGAAGCTCATTCCTATCGCCCTAGGTCCCCCAGCGCGCCGT CTCACCCGCCTCTGCCCCTCCCTCCGGCCATTTCTTCCTCCCTTCCTCCT GCGGCCGACATCTCGGCTGCCATCGGCAGTCGATCCCCTGTACCGGCTGG AGCACGAGCAGGCGGACAAGAGGCGGGCCGCGTCGCGGAAGACGGTGCTC ACGCGGCTCACGGAGCTGGCGGACGCGCACGGGCAGGACGACTACTCCTC CAACGCGCGGCTGCGGAAAGGGATGCGCGCCCGGAAGAAGAGGGAACGCG AGAGGGAGGAGGAGGCGACAGTGAGTTCATTCAAATCATCACCGGCATAT TTTTTTGCCAAACGTCGCTCGCCGACGTCCGCCTGACTTATACGGAGTGT TTTTTGTGGTGCGGAGGGCGAGCAACAATCCGGGGTGGTTGGTCTTTAGA GCGAGAACGGGAACGGGCGACTTGGTCGCGCCTCATGCTGCGGACGAATA GGTCGGTCGCTGCCGTCGCCAAGAATGCTGTAGCAGCGAAGACGCTGCGC TTGTCACGAACCCCTACCGCCTGTCCCTTTTATGAGAGTCGTCTCGTCGG TGTTTCAAAATCTTCAGACACGCACATTGACCATATCTGCTCCTAGAATG GCGTGAAATCCGTTTGTTCCCGTGGATGTTCCCGTGGATGGTCGGCTTGT CTCTTCTGTATTTAAAGGGGTCGTGGATTGAAATGTTGGGCCTACCAGCA CTTTTCTGCCTCCTCTCTCAGCCACACTCGAGTCTCTCGGTTATGTGAGA GGCCCGCAGTAAGCAGAAAGCAAACAGGACACCCACATCCAACTGTCGGC CGTCGTTTGGATGCTCTGCGATTGTCTCGGAACGCGGTCCTGGCGAGCTC ATTGGTCGTGTCGTGAAGGCCGTATTTCTTTCGCAGCGGCTGGGTAATTG TTGCATAAAAACTTTCATTTTTCTCTTTTCGCAGGCGAAAGGGCTCGGCA TACGTCTCGCGACCCCGAGCCCGGCCGACGTCGCGGCCGCCCGCGTCGTC AAGTACCGCAGCCGACACAAGAACTTCCGGACGGGAGAGAAGGCCAAGAT GGCGGCCATCACCGGCGAGTCGATCTTTGGGTCGGGCAGCGAGTCCTCCG AACAGGCCCGGCGCAAGGCCGTGCTAATCAAGGCGGCCAAGCTCGGCATC AAGACCAGAGGCTTGCGCTTACTGAGGCAAGCCGACGGGGGCGGGGACAG GGGCGGGGGCGACCGCGGCGGGTTGACACATAGACGAGCACCTGGTACTC ACGCTGCTAGTGGTGCGAGCAGTAGCAGTGCCGGAATG
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:1830970..1834557-

>mRNA_P-fluviatile_contig8.14482.1 ID=mRNA_P-fluviatile_contig8.14482.1|Name=mRNA_P-fluviatile_contig8.14482.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1926bp|location=Sequence derived from alignment at P-fluviatile_contig8:1830970..1834557- (Porterinema fluviatile SAG_2381)
ATGTCGACGCTCGCCGCCGCTCGCGCGGACAACATGTACTACCCTCCGGA
GTGGAGGCCGGAGTACGGGGGCATATCCAAGTTTCAGGGGTCGAAGGGCC
ACAACCAGTACGAGCAGTACGGCAAGATTCGGTTCGAGCTGCCCGTGCAC
GGGTGGTGCCTCGGCTGTGGGCGGCACATCGGCAGGATGTCGACGCTCGC
CGCCGCTCGCGCGGACAACATGTACTACCCTCCGGAGTGGAGGCCGGAGT
ACGGGGGCATATCCAAGTTTCAGGGGTCGAAGGGCCACAACCAGTACGAG
CAGTACGGCAAGATTCGGTTCGAGCTGCCCGTGCACGGGTGGTGCCTCGG
CTGTGGGCGGCACATCGGCAGGGGTACACGGTTCAACGCCACAAAGGACC
AAGCGGGCACCTACTACAGCACCAAGATATGGCAGTTCTCCATGAAGTGC
CCCTCCTGCAGCACAGTGATGGTCATCAAGACCGACCCCAAGAACACGGA
CTACGAGTACGTGGAGGGCATCCGCAAGAAGGATATGGCCTTCGATCCAG
AGGAGGCCGAAACCCAGCGCGTGCAGGACAGCGAGGTTTCCAACAAGCTC
GCAGGGTACACGGTTCAACGCCACAAAGGACCAAGCGGGCACCTACTACA
GCACCAAGATATGGCAGTTCTCCATGAAGTGCCCCTCCTGCAGCACAGTG
ATGGTCATCAAGACCGACCCCAAGAACACGGACTACGAGTACGTGGAGGG
CATCCGCAAGAAGGATATGGCCTTCGATCCAGAGGAGGCCGAAACCCAGC
GCGTGCAGGACAGCGAGGTTTCCAACAAGCTCGCAGTCGATCCCCTGTAC
CGGCTGGAGCACGAGCAGGCGGACAAGAGGCGGGCCGCGTCGCGGAAGAC
GGTGCTCACGCGGCTCACGGAGCTGGCGGACGCGCACGGGCAGGACGACT
ACTCCTCCAACGCGCGGCTGCGGAAAGGGATGCGCGCCCGGAAGAAGAGG
GAACGCGAGAGGGAGGAGGAGGCGACATCGATCCCCTGTACCGGCTGGAG
CACGAGCAGGCGGACAAGAGGCGGGCCGCGTCGCGGAAGACGGTGCTCAC
GCGGCTCACGGAGCTGGCGGACGCGCACGGGCAGGACGACTACTCCTCCA
ACGCGCGGCTGCGGAAAGGGATGCGCGCCCGGAAGAAGAGGGAACGCGAG
AGGGAGGAGGAGGCGACAGCGAAAGGGCTCGGCATACGTCTCGCGACCCC
GAGCCCGGCCGACGTCGCGGCCGCCCGCGTCGTCAAGTACCGCAGCCGAC
ACAAGAACTTCCGGACGGGAGAGAAGGCCAAGATGGCGGCCATCACCGGC
GAGTCGATCTTTGGGTCGGGCAGCGAGTCCTCCGAACAGGCCCGGCGCAA
GGCCGTGCTAATCAAGGCGGCCAAGCTCGGCATCAAGACCAGAGGCTTGC
GCTTACTGAGGCAAGCCGACGGGGGCGGGGACAGGGGCGGGGGCGACCGC
GGCGGGTTGACACATAGACGAGCACCTGGTACTCACGCTGCTAGTGGTGC
GAGCAGTAGCAGTGCCGGAATGGCGAAAGGGCTCGGCATACGTCTCGCGA
CCCCGAGCCCGGCCGACGTCGCGGCCGCCCGCGTCGTCAAGTACCGCAGC
CGACACAAGAACTTCCGGACGGGAGAGAAGGCCAAGATGGCGGCCATCAC
CGGCGAGTCGATCTTTGGGTCGGGCAGCGAGTCCTCCGAACAGGCCCGGC
GCAAGGCCGTGCTAATCAAGGCGGCCAAGCTCGGCATCAAGACCAGAGGC
TTGCGCTTACTGAGGCAAGCCGACGGGGGCGGGGACAGGGGCGGGGGCGA
CCGCGGCGGGTTGACACATAGACGAGCACCTGGTACTCACGCTGCTAGTG
GTGCGAGCAGTAGCAGTGCCGGAATG
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