mRNA_P-fluviatile_contig8.14460.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14460.1
Unique NamemRNA_P-fluviatile_contig8.14460.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:1639164..1641657 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size1443
Cds size1029
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14460.1prot_P-fluviatile_contig8.14460.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 1640236..1641657 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817215.98805-UTR-P-fluviatile_contig8:1639163..16392531622817215.98805-UTR-P-fluviatile_contig8:1639163..1639253Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1639164..1639253 +
1693571534.3125222-UTR-P-fluviatile_contig8:1639163..16392531693571534.3125222-UTR-P-fluviatile_contig8:1639163..1639253Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1639164..1639253 +
1622817216.0017393-UTR-P-fluviatile_contig8:1639866..16400531622817216.0017393-UTR-P-fluviatile_contig8:1639866..1640053Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1639867..1640053 +
1693571534.3212962-UTR-P-fluviatile_contig8:1639866..16400531693571534.3212962-UTR-P-fluviatile_contig8:1639866..1640053Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1639867..1640053 +
1622817216.0150242-UTR-P-fluviatile_contig8:1640099..16402351622817216.0150242-UTR-P-fluviatile_contig8:1640099..1640235Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1640100..1640235 +
1693571534.329885-UTR-P-fluviatile_contig8:1640099..16402351693571534.329885-UTR-P-fluviatile_contig8:1640099..1640235Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1640100..1640235 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817216.0316153-CDS-P-fluviatile_contig8:1640235..16407031622817216.0316153-CDS-P-fluviatile_contig8:1640235..1640703Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1640236..1640703 +
1693571534.3407176-CDS-P-fluviatile_contig8:1640235..16407031693571534.3407176-CDS-P-fluviatile_contig8:1640235..1640703Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1640236..1640703 +
1622817216.0459108-CDS-P-fluviatile_contig8:1641096..16416571622817216.0459108-CDS-P-fluviatile_contig8:1641096..1641657Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1641097..1641657 +
1693571534.3490014-CDS-P-fluviatile_contig8:1641096..16416571693571534.3490014-CDS-P-fluviatile_contig8:1641096..1641657Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1641097..1641657 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14460.1

>prot_P-fluviatile_contig8.14460.1 ID=prot_P-fluviatile_contig8.14460.1|Name=mRNA_P-fluviatile_contig8.14460.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=343bp
MGRPVRPPRPRGGSGTAINHDHHDDGGNETIRAPIASSTEGGYGEGGEGR
GFPSKSNDARASKYRGNGFYCPADYSADDGGSTGGSREEDEDQKEKRDKD
AEMGYGNSNGLIYEEVFSENRREFGETIVAMLTRDGRPAVPLEEVLRIPR
RPLGMTIKELFVGHIIKGARSFHGNRGVMVRLDTSSEPRAERVANGVPGS
SGSGSGNGIELRGGRGNTGPGGHQPMTQKGWVGGRLSTCDKGRSVFLSSF
TPSNDRWRMGRSPERDRDQRPPSTAGRTGHMSDRAVCGGSLRYGVADVER
GRRDRSDSRSGSEVSRWRMRDGRDRAARPRSRDNAHRRRHRRR
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mRNA from alignment at P-fluviatile_contig8:1639164..1641657+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14460.1 ID=mRNA_P-fluviatile_contig8.14460.1|Name=mRNA_P-fluviatile_contig8.14460.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2494bp|location=Sequence derived from alignment at P-fluviatile_contig8:1639164..1641657+ (Porterinema fluviatile SAG_2381)
GCCGCGGCCGCGGCCGCGGAGACGCGGAGAAGGCCGCAGGAGATACTGAT
GGACATCCCGGTTGGACAGAGGTTCGACTTCAACTACCTGGTGAGCTGTG
GCTGTGCCAAGCTTACAAGCCCTCAATACTTTTTGGAGCGAAGTTGTGAC
GAAGTATTGGCGGACTTTCCGTGGGCCCTGGAATTCTGCATAGTGCAGGA
TCGGGTGCCAATCCGGGGGCATCGAATCATGAGCGTGTTTGTTGTGGGGG
CGGAAAGCCGTGCGTTTCGCACGCCACTTGGCCCGCGCCGCGCACGGGTT
TGGTCCGGAAATCTCGTAGGTTTTCTCCTTTGTCTAGCGTCAAGTCCGAA
ACATATTTTTTGCTGCGTTGGTGAGCTTTGAAATCTGCGAACTCCTTTAG
GTCGCTTGAGGTTAATCTTTTAGGCCAGATATCATTTTTTCCGGCCGGAC
CTACCACACGGTTGCAAATCCCACCCTGCACGCTATGTAGAGAGCGCTTT
TTTCTGCCTCTTTACGATGGACCCTTGATATTTAGCCCGCCGCCAACATA
CGAACCACTCGTTCCCACATAAAATTTCCTCTGTGCCTTCTCCCCCGCTG
CCGACTTCTCCAACCCCGTGATTGAATCGGAACCACGTCTCACTGGCGCA
TTACCATCAACGAAACGGATCCTTGCCATCTTCCGCATTCCCTCGCCCCG
CAGCCGCACGGTATGGGTTCCGGTGGGATCCACCCGTATCCTGCGCATTT
TGGCCAGGAAGTGCGCATGAACCCCCTGCCGCCAGACTCGCTGGCGCCCG
GAGACTTCGACCGTGATCGCCAGCACGAGATCGAGGACAGCACCTACAAC
GATATCAGTGAGAACATCAGCTACCCAAACAGAGACCATGGCCGCGACAA
CAACAGCGACAACACCACCAGCAATGCCGACAACAGCAGCAGCAACCACA
ACAACAACAACAACAACAGCAACGGCGACAGCCATACCCACGATGACATC
AAAAACAACCTTGGGTACGTCGGCGGGAACGGCGGCGTTTCACGAACGAC
CGCCGCTGGCTCGAGGGATGACATGGGCCGGCCGGTCCGCCCACCACGTC
CTAGGGGCGGGAGCGGTACCGCCATCAACCACGATCACCACGACGATGGC
GGCAACGAAACGATACGGGCACCGATCGCCTCCAGCACGGAAGGAGGCTA
CGGCGAAGGCGGTGAAGGGCGCGGATTCCCGTCAAAAAGCAACGACGCCC
GCGCTTCTAAGTACAGGGGGAATGGCTTCTACTGCCCAGCAGACTACAGC
GCCGATGATGGTGGATCGACGGGTGGTAGCAGGGAGGAAGACGAGGACCA
GAAGGAGAAGAGAGACAAGGACGCGGAGATGGGGTACGGAAACTCGAACG
GACTCATCTACGAGGAGGTGTTTAGCGAAAACCGCCGGGAGTTCGGAGAA
ACAATCGTCGCCATGCTGACGAGAGATGGCCGCCCGGCGGTGCCACTCGA
AGAAGTTCTGCGGATACCCCGGCGGCCGCTAGGCATGACGGTGAGCGCCG
TTTGATGGTCCGAGGAGATGATCCCGGCCTATAATCTGCGATTTTCTCAT
TGCTTGTTTAGACCGTTGCTGCTTGATTGGTGTTCATGCGAACGCTTTTT
GTTTCCTTCCTTTTCCTGCTTCGACGTCCCCTCGGCCCTCCGGGCAGACG
AGTTTGGGCGACAAGCGCGTGACCTCAGAAGCAGGCGTAGTGTGGCCGCA
CACACCTCGCGGCTCTTGACTCTTGACGAGGCGTACGTGTGGCACAGCAG
TGGCAGCGCATGCTGCCATACCCTGCATGCACTCAGGCTTGCCCACGATA
CACGAAATACTTCCCGTCTTCCCCATGTGACTGAAGGAAACCCGTACAAA
TCGACGTCGCTACTGTCTTGCTTTGTTACGCAGATCAAGGAGCTGTTCGT
GGGGCACATTATCAAAGGCGCCAGGTCGTTTCACGGAAATCGGGGGGTGA
TGGTCAGGCTGGACACCTCCTCGGAGCCGCGAGCGGAGCGCGTCGCCAAC
GGCGTGCCTGGTAGCAGCGGCAGCGGCAGCGGCAACGGCATTGAGTTGCG
CGGCGGAAGGGGAAACACGGGGCCGGGAGGGCATCAACCAATGACGCAGA
AGGGGTGGGTCGGCGGCCGACTGTCAACATGTGACAAAGGGCGTAGCGTC
TTTCTTTCCAGTTTTACGCCCAGTAACGATCGCTGGCGAATGGGCCGGTC
TCCGGAGAGGGACCGTGATCAGAGGCCACCGTCTACCGCGGGACGGACCG
GCCACATGAGCGATAGGGCCGTCTGCGGCGGTAGTCTCAGATACGGCGTT
GCTGACGTCGAGCGGGGTAGGCGAGACCGTTCTGATAGCAGGTCCGGCAG
CGAGGTCTCCCGATGGCGCATGCGGGATGGGAGGGATCGCGCAGCTAGGC
CCAGGTCCAGGGATAATGCGCATCGTCGCCGCCACCGTCGCCGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:1639164..1641657+

>mRNA_P-fluviatile_contig8.14460.1 ID=mRNA_P-fluviatile_contig8.14460.1|Name=mRNA_P-fluviatile_contig8.14460.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2058bp|location=Sequence derived from alignment at P-fluviatile_contig8:1639164..1641657+ (Porterinema fluviatile SAG_2381)
ATGGGCCGGCCGGTCCGCCCACCACGTCCTAGGGGCGGGAGCGGTACCGC
CATCAACCACGATCACCACGACGATGGCGGCAACGAAACGATACGGGCAC
CGATCGCCTCCAGCACGGAAGGAGGCTACGGCGAAGGCGGTGAAGGGCGC
GGATTCCCGTCAAAAAGCAACGACGCCCGCGCTTCTAAGTACAGGGGGAA
TGGCTTCTACTGCCCAGCAGACTACAGCGCCGATGATGGTGGATCGACGG
GTGGTAGCAGGGAGGAAGACGAGGACCAGAAGGAGAAGAGAGACAAGGAC
GCGGAGATGGGGTACGGAAACTCGAACGGACTCATCTACGAGGAGGTGTT
TAGCGAAAACCGCCGGGAGTTCGGAGAAACAATCGTCGCCATGCTGACGA
GAGATGGCCGCCCGGCGGTGCCACTCGAAGAAGTTCTGCGGATACCCCGG
CGGCCGCTAGGCATGACGATGGGCCGGCCGGTCCGCCCACCACGTCCTAG
GGGCGGGAGCGGTACCGCCATCAACCACGATCACCACGACGATGGCGGCA
ACGAAACGATACGGGCACCGATCGCCTCCAGCACGGAAGGAGGCTACGGC
GAAGGCGGTGAAGGGCGCGGATTCCCGTCAAAAAGCAACGACGCCCGCGC
TTCTAAGTACAGGGGGAATGGCTTCTACTGCCCAGCAGACTACAGCGCCG
ATGATGGTGGATCGACGGGTGGTAGCAGGGAGGAAGACGAGGACCAGAAG
GAGAAGAGAGACAAGGACGCGGAGATGGGGTACGGAAACTCGAACGGACT
CATCTACGAGGAGGTGTTTAGCGAAAACCGCCGGGAGTTCGGAGAAACAA
TCGTCGCCATGCTGACGAGAGATGGCCGCCCGGCGGTGCCACTCGAAGAA
GTTCTGCGGATACCCCGGCGGCCGCTAGGCATGACGATCAAGGAGCTGTT
CGTGGGGCACATTATCAAAGGCGCCAGGTCGTTTCACGGAAATCGGGGGG
TGATGGTCAGGCTGGACACCTCCTCGGAGCCGCGAGCGGAGCGCGTCGCC
AACGGCGTGCCTGGTAGCAGCGGCAGCGGCAGCGGCAACGGCATTGAGTT
GCGCGGCGGAAGGGGAAACACGGGGCCGGGAGGGCATCAACCAATGACGC
AGAAGGGGTGGGTCGGCGGCCGACTGTCAACATGTGACAAAGGGCGTAGC
GTCTTTCTTTCCAGTTTTACGCCCAGTAACGATCGCTGGCGAATGGGCCG
GTCTCCGGAGAGGGACCGTGATCAGAGGCCACCGTCTACCGCGGGACGGA
CCGGCCACATGAGCGATAGGGCCGTCTGCGGCGGTAGTCTCAGATACGGC
GTTGCTGACGTCGAGCGGGGTAGGCGAGACCGTTCTGATAGCAGGTCCGG
CAGCGAGGTCTCCCGATGGCGCATGCGGGATGGGAGGGATCGCGCAGCTA
GGCCCAGGTCCAGGGATAATGCGCATCGTCGCCGCCACCGTCGCCGCATC
AAGGAGCTGTTCGTGGGGCACATTATCAAAGGCGCCAGGTCGTTTCACGG
AAATCGGGGGGTGATGGTCAGGCTGGACACCTCCTCGGAGCCGCGAGCGG
AGCGCGTCGCCAACGGCGTGCCTGGTAGCAGCGGCAGCGGCAGCGGCAAC
GGCATTGAGTTGCGCGGCGGAAGGGGAAACACGGGGCCGGGAGGGCATCA
ACCAATGACGCAGAAGGGGTGGGTCGGCGGCCGACTGTCAACATGTGACA
AAGGGCGTAGCGTCTTTCTTTCCAGTTTTACGCCCAGTAACGATCGCTGG
CGAATGGGCCGGTCTCCGGAGAGGGACCGTGATCAGAGGCCACCGTCTAC
CGCGGGACGGACCGGCCACATGAGCGATAGGGCCGTCTGCGGCGGTAGTC
TCAGATACGGCGTTGCTGACGTCGAGCGGGGTAGGCGAGACCGTTCTGAT
AGCAGGTCCGGCAGCGAGGTCTCCCGATGGCGCATGCGGGATGGGAGGGA
TCGCGCAGCTAGGCCCAGGTCCAGGGATAATGCGCATCGTCGCCGCCACC
GTCGCCGC
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