mRNA_P-fluviatile_contig8.14456.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14456.1 vs. uniprot
Match: A0A6H5KB32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB32_9PHAE) HSP 1 Score: 512 bits (1319), Expect = 2.290e-156 Identity = 363/753 (48.21%), Postives = 419/753 (55.64%), Query Frame = 1
Query: 1669 EGARSLAYKLVSREPRLLLVHAETDLAARLRFLLDSLPGLRRDSDGR--RVAPLLAIDTATLKGRLEGLAEVFPDHVDLQV---------ILNKAPLLLRRSTESVSEALTNLERTVPGIRIDRVLRAAPQLLVQPLDAVEERLSHLRAVLGLASSPVVEEVKEAQTAEHQAWITVGKKTSGISGTRRAQGEGDERGGRGVGSVGG--ESAGPRPLARFANAFPQILAMEPHTVRAKIKGLEALLLGMDGLAVVSSRPQLLGFSVRGNVSHKVSGLRALMEVQG----QRREAGQLPRQXXXXXXXXXXXXXXVHNIGWGGGE-LAAAVARCPSLLTLSSDTAARKLEELQEALPPGVDARTVVAKEPRVMALDTQFSVPRKLDGFARVLAEHAGASTGSESPGACSGASSSASVHSIARAGSSTRFISSAGTDADTAEGLVAAAMAEVLQYYPNALRFDTTTLAGKLTALRSAGLSGETVLAVVRGAPRCLSVAARTLRRRVLALTEALPSVCVNGLLGAAPSLLVNRIDPPAARVGVLRELFPTLSPVHLVEGAPMLLALSESTLRAKSDAWRSIIECSVQEPWEEAIATFPKLLCQGLGRAARVAFLLLPAD-------------------AQSVASTASSSFAAKEKXXXXXXXXXXXXXXXXXXXXXXXXPRATAAPTATGPVVVDRAESRSEKARMATAPYGGXXXXXXXXXMSLATASHEICRRVADFEADHPGYPAFLDSLLFAA 3816
EGAR AY+LVS EPRLLL+ AE +L+ RLRFLL+ LP LR R R APLLAI+++ L+ RLEGLA++FP DLQV I+N+ PLLLR TE VSEAL N+ER VPG+R+DRVLR+APQLLVQPLD VE+RL+ LRAVL L SP VE ++ + + +++ + SG SG R D+ G RG G VGG AG R LARFAN FPQIL MEPHTVRAKI+GLEALL GMDGLA+V SRP LLGF VR NVS KVS LR LM Q QRR GQ + G + L AAVARCPSLLTLSS+T+ RK+E+LQEALP G+ ART+VAKEPRVM+LD +VPRKL + AE AG MA+ L+Y PNALRFD TLA KL LR AGLS ETV VV GAPRCLS AA TL RV AL EA PSV ++ LLG AP LL IDP A+ MLLALSE TLR K DAWRSI+E V PWE+ +A FP+LLCQG GRAARV FLLL + V +TA + AA A AA A G D S K R A G MS A A E+CRRV+DFE+DHPGYP FLDSLL AA
Sbjct: 67 EGARLHAYQLVSSEPRLLLLRAEPELSGRLRFLLEMLPSLRGSWSARLRRAAPLLAIESSALQSRLEGLADLFPPDADLQVGAGLFIGGAIVNQTPLLLRHRTEKVSEALANIERLVPGLRMDRVLRSAPQLLVQPLDVVEKRLAQLRAVLCLTPSPEVERMRITLEPNNSSDVSI-ESDSG-SGRRGGGDRDDDIGSRGGGRVGGGGRPAGVRRLARFANGFPQILTMEPHTVRAKIEGLEALLPGMDGLALVGSRPHLLGFDVRRNVSLKVSRLRELMMDQSLAPQQRR--GQQETSTMVGGALRLRTFFLLRAKGTDASDDLVAAVARCPSLLTLSSNTSMRKVEKLQEALPSGLVARTIVAKEPRVMSLDMASTVPRKLADLSHAFAELAGGXXXXX------------------------XXXXXXXXXXXXXXXXXXXMMAQTLRYNPNALRFDPATLARKLEVLRGAGLSAETVCRVVGGAPRCLSAAAGTLEARVSALREAFPSVPLSRLLGEAPCLLQKTIDP-VAKXXXXXXXXXXXXXXXXXXXXXMLLALSEKTLRVKRDAWRSIVEDRVDVPWEQVVADFPQLLCQGFGRAARVPFLLLDXXXXXXXXXXXXXXXXXXXXXGERVVTTAVAMVAAGGLGDEVLRATHAPGVASDGVAAGDGVGAAAAA-AAGG----DSWRSGVGKERSAGGGVDGGSGVAPRT-MSAAAACREVCRRVSDFESDHPGYPCFLDSLLVAA 784
BLAST of mRNA_P-fluviatile_contig8.14456.1 vs. uniprot
Match: D7G2Q0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Q0_ECTSI) HSP 1 Score: 301 bits (771), Expect = 5.140e-86 Identity = 204/393 (51.91%), Postives = 227/393 (57.76%), Query Frame = 1
Query: 2314 MEPHTVRAKIKGLEALLLGMDGLAVVSSRPQLLGFSVRGNVSHKVSGLRALMEVQG----QRREAGQLPRQXXXXXXXXXXXXXXVHNIGWGGGELAAAVARCPSLLTLSSDTAARKLEELQEALPPGVDARTVVAKEPRVMALDTQFSVPRKLDGFARVLAEHAGASTGSESPGACSGASSSASVHSIARAGSSTRFISSAGTDADTAEGLVAAAMAEVLQYYPNALRFDTTTLAGKLTALRSAGLSGETVLAVVRGAPRCLSVAARTLRRRVLALTEALPSVCVNGLLGAAPSLLVNRIDPPAARVGVLRELFPTLSPVHLVEGAPMLLALSESTLRAKSDAWRSIIECSVQEPWEEAIATFPKLLCQGLGRAARVAFLLLPADAQSVAST 3480
MEPHTVRAKI+GLEALL GMDGLA+V SRP LLGF VR NVS KVS LR LM Q QRR GQ P + +L AAVARCPSLLTLSSDT+ RK+E+LQEALP G+ ART+VAKEPRVM+LD +VPRKL AR EHAG MA+ L+Y PNALRFD TLA KL LR AGLS ETV VV GAPRCLS AA TL RV AL EA PSV ++ LLG AP LL IDP A++ MLLALSE+TLR K DAWRSI+E V PWE+ +A FP+LLCQGLGRAARV FLLL D +VAST
Sbjct: 1 MEPHTVRAKIEGLEALLPGMDGLALVGSRPHLLGFDVRRNVSLKVSRLRELMMDQSLPPQQRR--GQQPGRGQQETSNMANGTDASD-------DLVAAVARCPSLLTLSSDTSMRKVEKLQEALPSGLVARTIVAKEPRVMSLDMTSTVPRKLADLARAFTEHAGGXXXXX-------------------------XXXXXXXXXXXXXXXXXVMMAQTLRYNPNALRFDPATLARKLGVLRGAGLSAETVCRVVGGAPRCLSAAAGTLEARVSALREAFPSVPLSRLLGEAPCLLQKTIDP-VAKIXXXXXXXXXXXXXXXXXXXXMLLALSENTLRVKRDAWRSILENRVDVPWEQVVADFPQLLCQGLGRAARVPFLLLD-DPPAVAST 357 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14456.1 >prot_P-fluviatile_contig8.14456.1 ID=prot_P-fluviatile_contig8.14456.1|Name=mRNA_P-fluviatile_contig8.14456.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1440bp MIWIPVAYECSSYSPRNTILNSHSCFHYFPSTERRACMLRLSTVRACVFGback to top mRNA from alignment at P-fluviatile_contig8:1616649..1627348+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14456.1 ID=mRNA_P-fluviatile_contig8.14456.1|Name=mRNA_P-fluviatile_contig8.14456.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10700bp|location=Sequence derived from alignment at P-fluviatile_contig8:1616649..1627348+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:1616649..1627348+ >mRNA_P-fluviatile_contig8.14456.1 ID=mRNA_P-fluviatile_contig8.14456.1|Name=mRNA_P-fluviatile_contig8.14456.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=8640bp|location=Sequence derived from alignment at P-fluviatile_contig8:1616649..1627348+ (Porterinema fluviatile SAG_2381)back to top |