mRNA_P-fluviatile_contig8.14453.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14453.1
Unique NamemRNA_P-fluviatile_contig8.14453.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig8.14453.1 vs. uniprot
Match: D8LKV4_ECTSI (Bardet-Biedl syndrome 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKV4_ECTSI)

HSP 1 Score: 671 bits (1731), Expect = 2.070e-241
Identity = 329/394 (83.50%), Postives = 366/394 (92.89%), Query Frame = 1
Query:   10 PPVHRRDDGGEGVILRERRNWRIFATYARQEYPECLQIIEEQLHACNGLAEYPIYVKGQVLRSQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALEVYDEAKNIDSEDWEVWHNQGLCYMHLKQFERALEAFVQSNSISRHDSTYLHMGKVFRLLGKPAEALAIYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQGLYVAAVACLKRSLYLDPFEWIVAYNLGLVHLNTSQYASSFHHFSASINLKPDFAPSYMYLAISLARLEDFDNACSAYDKALDLEA---DYLTHLNYAVTLLNNDEPEKAAEHFGAFKRLFEALDPDAEQDDEVVASSRALEEAL 1182
            PPVHR  +  EGV+LRERRNWRIF+ +ARQEYPECLQIIEEQL ACNGLAEY I+VKGQ++R+QG+IQESL LFQAATCLNPQNPSNLK+VGRCLFLLGKHKAAL+VY EA+ IDSEDWEVWH++GLCYMHLKQFERALEAF Q+NSISRHDST+LHMGKV+RL  KPAEAL +YEEALEFSPESPELLTTVGLLHLQQG+NQKAFE LGNALTHDPR+PKAILAAGSIIQDNQDMDVALVKYRVSAVQ  Y+AAVACLKR+LYLDPFEWIVAYNLGLVHL+TSQYAS+FHHFSA+INLKPDFA SYMYLAI+LARLEDFDNACSAYDKAL+L+    DYLTHLNYAVTLLNNDEPE+AAEH+ +FK++FEALDPD E+D EV+A S+AL  +L
Sbjct:   15 PPVHR-PEAIEGVVLRERRNWRIFSAFARQEYPECLQIIEEQLRACNGLAEYAIHVKGQIVRAQGQIQESLVLFQAATCLNPQNPSNLKEVGRCLFLLGKHKAALDVYGEAQQIDSEDWEVWHSRGLCYMHLKQFERALEAFDQANSISRHDSTFLHMGKVYRLQDKPAEALTVYEEALEFSPESPELLTTVGLLHLQQGENQKAFECLGNALTHDPRNPKAILAAGSIIQDNQDMDVALVKYRVSAVQCKYIAAVACLKRALYLDPFEWIVAYNLGLVHLSTSQYASAFHHFSAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKALELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDTERDQEVLARSQALANSL 407          
BLAST of mRNA_P-fluviatile_contig8.14453.1 vs. uniprot
Match: A0A8J6CHX9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CHX9_DIALT)

HSP 1 Score: 495 bits (1274), Expect = 7.360e-172
Identity = 243/394 (61.68%), Postives = 303/394 (76.90%), Query Frame = 1
Query:   55 RERRNWRIFATYARQEYPECLQIIEEQLHACNGLAEYPIYVKGQVLRSQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALEVYDEAKNIDSEDWEVWHNQGLCYMHLKQFERALEAFVQSNSISRHDSTYLHMGKVFRLLGKPAEALAIYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAV------------------QGLYVAAVACLKRSLYLDPFEWIVAYNLGLVHLNTSQYASSFHHFSASINLKPDFAPSYMYLAISLARLEDFDNACSAYDKALDLEADYLTHLNYAVTLLNNDEPEKAAEHFGAFKRLFEALDPDAEQDDEVVASSRALEEAL 1182
            RER NW I   Y +Q Y  CL +IEEQL   NGL EYPIY+K  + R +G IQ+SL LFQAATCLNP N +NLKQVGR L+LLGKHKAAL+VY EA  ++ EDWEVWHNQGLC M+LKQ+E+A++ F Q+N+I +HD TY+ +GKV+ L      A+ +Y EAL+FSP++PE+LTTVGLL+L+ G+N +AF+ LGN+LTHDP++PK ILAAGSIIQD+ DMDVALVKYRV+AV                  +  YVAA+ACLKR+LYLDPFEWI++YNLGLVHLNT QYAS+FH FS+SINLKPDF  SYMYLAI+L+RL+DFDNACSAY+KA+++E D+L  LN+A+TL NNDE EKAAEHF  F++L+  LD +A+  D  VA  R    AL
Sbjct:   16 RERVNWLIHVNYVQQNYDHCLALIEEQLKMHNGLCEYPIYIKALIKRQRGEIQDSLQLFQAATCLNPNNINNLKQVGRSLYLLGKHKAALDVYKEAMRLNEEDWEVWHNQGLCQMYLKQYEKAIDCFKQANAIQQHDVTYIQLGKVYTLQEDFRAAIEVYLEALDFSPDNPEMLTTVGLLYLRLGENYRAFDFLGNSLTHDPKNPKTILAAGSIIQDHSDMDVALVKYRVAAVATPNSAQLWNNIGMCFFGKQRYVAAIACLKRALYLDPFEWIISYNLGLVHLNTGQYASAFHFFSSSINLKPDFPSSYMYLAITLSRLDDFDNACSAYEKAIEMEDDHLFELNFAITLYNNDEVEKAAEHFAKFEQLYAKLDDEAKSSDPEVAEQRQALAAL 409          
BLAST of mRNA_P-fluviatile_contig8.14453.1 vs. uniprot
Match: A0A6T9B7X8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A6T9B7X8_9EUKA)

HSP 1 Score: 492 bits (1266), Expect = 8.490e-171
Identity = 244/399 (61.15%), Postives = 306/399 (76.69%), Query Frame = 1
Query:   43 GVILRERRNWRIFATYARQEYPECLQIIEEQLHACNGLAEYPIYVKGQVLRSQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALEVYDEAKNIDSEDWEVWHNQGLCYMHLKQFERALEAFVQSNSISRHDSTYLHMGKVFRLLGKPAEALAIYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YVAAVACLKRSLYLDPFEWIVAYNLGLVHLNTSQYASSFHHFSASINLKPDFAPSYMYLAISLARLEDFDNACSAYDKALDLEADYLTHLNYAVTLLNNDEPEKAAEHFGAFKRLFEALDPDAEQ-DDEVVASSRALEEAL 1182
            GV LRER NW I   Y RQ+Y +CL+ IE  L  C GLAEYPIYVK  + R +G I ESL LFQAATCLNP N SNLKQVGR L+LLG+HKAA++VY+EA  + SEDWE+WHN+GLC M+LKQ+E A+E   ++N I RHD+T++ +GKV+ L  +   A+ +Y EA+EFSPE+PE+LTT+GLL+L+ G+N KAF+ LGN+LTHDP++PK ILAAGSIIQDN DMDVALVKYR++AVQ           G+       +VAA+ACLKR+LYLDPFEWI++YNLGLVHLNT QYAS+FH+FS SINLKPDF  SYMYLAI+L+RLEDF+NA SAY+KA+++E D+L  LNY V L  N E +KA EHF  F+RLF  LD +++  D EV+    AL+EAL
Sbjct:    3 GVTLRERVNWLIHIQYVRQDYNDCLKTIEAHLAQCRGLAEYPIYVKALIKRQRGEINESLQLFQAATCLNPHNVSNLKQVGRSLYLLGRHKAAIDVYEEALKLGSEDWEIWHNKGLCCMYLKQYEAAIECLKRANLIQRHDATFMQLGKVYTLQEQYRNAIDVYLEAIEFSPENPEILTTIGLLYLRLGENLKAFDYLGNSLTHDPKNPKTILAAGSIIQDNSDMDVALVKYRIAAVQTPNSAQLWNNIGMCFFGKQRFVAAIACLKRALYLDPFEWIISYNLGLVHLNTGQYASAFHYFSTSINLKPDFPSSYMYLAITLSRLEDFENAYSAYEKAIEMEEDHLFELNYTVALYINGEVDKAREHFATFERLFTKLDDESKNADPEVIEQRAALQEAL 401          
BLAST of mRNA_P-fluviatile_contig8.14453.1 vs. uniprot
Match: A0A6S9RQ16_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6S9RQ16_CHRCT)

HSP 1 Score: 486 bits (1252), Expect = 2.540e-168
Identity = 241/396 (60.86%), Postives = 301/396 (76.01%), Query Frame = 1
Query:   58 ERRNWRIFATYARQEYPECLQIIEEQLHACNGLAEYPIYVKGQVLRSQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALEVYDEAKNIDSEDWEVWHNQGLCYMHLKQFERALEAFVQSNSISRHDSTYLHMGKVFRLLGKPAEALAIYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YVAAVACLKRSLYLDPFEWIVAYNLGLVHLNTSQYASSFHHFSASINLKPDFAPSYMYLAISLARLEDFDNACSAYDKALDLEADYLTHLNYAVTLLNNDEPEKAAEHFGAFKRLFEALDPDAEQDDEVVASSRALEEALRGV 1191
            ER NW I   Y RQ+Y ECL+ IE+ L    G+ EY IYVK  + R +G IQESL LFQAATCLNP N SNLKQVGR L+LLG+H+AA++VYDEA+ I  EDWE+ HN+GLC+++LKQ+E A  AF ++NSI RHD+TY+ +GKV+ L      A+ +Y EALEFSPE+P+LLTT+GLLHL+ G+N KAF+ LGN+LTHDP++PK ILAAGSIIQD+ DMDVALVKYRV+AVQ           G+       YVA++ACLKR+LYLDPFEWI++YNLGLVHLNT QYAS+FHHFS SINLK DFA SYMYLAI+L+RL+D +NAC+AY+KA+D+E D++  LNYA+TL NN+E E+A EHF  F+R+F  LD +A   D  V   R L  A  GV
Sbjct:   17 ERHNWHIHMLYVRQDYDECLKAIEKALKESKGMCEYAIYVKALIKRQRGEIQESLQLFQAATCLNPHNISNLKQVGRSLYLLGRHRAAIDVYDEAERIGIEDWEIKHNRGLCFLYLKQYEEAANAFKKANSIQRHDNTYVQLGKVYTLQEDYRAAIEVYMEALEFSPENPDLLTTLGLLHLRLGENFKAFDYLGNSLTHDPKNPKTILAAGSIIQDHSDMDVALVKYRVAAVQTPNSAQLWNNIGMCFFGKQRYVASIACLKRALYLDPFEWIISYNLGLVHLNTGQYASAFHHFSTSINLKADFASSYMYLAITLSRLDDLENACAAYEKAIDMEEDHMFELNYAITLANNEELERAKEHFAQFERIFAKLDDEARSADPEVEEMRMLLAATLGV 412          
BLAST of mRNA_P-fluviatile_contig8.14453.1 vs. uniprot
Match: A0A7S3GDF2_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GDF2_9EUKA)

HSP 1 Score: 483 bits (1243), Expect = 3.270e-167
Identity = 237/399 (59.40%), Postives = 310/399 (77.69%), Query Frame = 1
Query:   52 LRERRNWRIFATYARQEYPECLQIIEEQLHACNGLAEYPIYVKGQVLRSQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALEVYDEAKNIDSEDWEVWHNQGLCYMHLKQFERALEAFVQSNSISRHDSTYLHMGKVFRLLGKPAEALAIYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YVAAVACLKRSLYLDPFEWIVAYNLGLVHLNTSQYASSFHHFSASINLKPDFAPSYMYLAISLARLEDFDNACSAYDKALDLEADYLTHLNYAVTLLNNDEPEKAAEHFGAFKRLFEALDPDAEQ-DDEVVASSRALEEALRGV 1191
            LRE++N  I   Y RQ+Y +CL++IEEQL  C GL EYPIYVK  + R +G+I ESL LFQAAT LNP N +NLKQVGR L+LLGKHKAA++VY+EA+ I  +DWE+WHN+GLC M LK+++ A+E+F  +NSI RHD+TY+ +GKV+ L      A+ +Y EALEFSPE+PE+LTT+GLL+L+ G+N +AF+ LGNALTHD ++PK ILAAGSIIQD+ DMDVAL+KYRV+A Q           G+       YVAA+ACLK++LYLDPFEWI++YNLGLVHLNT QYAS+FH+FSASINLKPDF  SYMYLAI+L+RL+DF+NACSAY+KA+++E+DY+  LNY++TL NN + EKA +HF  F+RLF+ LD + +  D +V+   +AL   L+ V
Sbjct:   11 LREKKNALIHRLYIRQDYDDCLKVIEEQLKECKGLCEYPIYVKALIKRQRGQINESLQLFQAATVLNPHNVANLKQVGRSLYLLGKHKAAIDVYEEAQKIGIDDWEIWHNKGLCNMFLKKYKEAIESFRHANSIQRHDATYMQLGKVYTLQENYKAAIEVYLEALEFSPENPEILTTIGLLYLRLGENYRAFDFLGNALTHDAKNPKTILAAGSIIQDHSDMDVALIKYRVAATQTPNSAQLWNNIGMCFFGKQRYVAAIACLKKALYLDPFEWIISYNLGLVHLNTGQYASAFHYFSASINLKPDFPSSYMYLAITLSRLDDFENACSAYEKAIEMESDYMFELNYSITLYNNGDVEKAKQHFVEFERLFQELDEETKNADPDVLEQRQALVMLLQKV 409          
BLAST of mRNA_P-fluviatile_contig8.14453.1 vs. uniprot
Match: A0A7S0X8L8_9CHLO (Hypothetical protein n=2 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X8L8_9CHLO)

HSP 1 Score: 474 bits (1219), Expect = 9.620e-163
Identity = 230/393 (58.52%), Postives = 302/393 (76.84%), Query Frame = 1
Query:   46 VILRERRNWRIFATYARQEYPECLQIIEEQLHACNGLAEYPIYVKGQVLRSQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALEVYDEAKNIDSEDWEVWHNQGLCYMHLKQFERALEAFVQSNSISRHDSTYLHMGKVFRLLGKPAEALAIYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YVAAVACLKRSLYLDPFEWIVAYNLGLVHLNTSQYASSFHHFSASINLKPDFAPSYMYLAISLARLEDFDNACSAYDKALDLEADYLTHLNYAVTLLNNDEPEKAAEHFGAFKRLFEALDPDAEQDDEVVASSRAL 1170
             I RERRN++I   Y RQ++ +CL +IE  L   NG+ EYPIYVK  + R QG+IQESL LFQAAT LNP N +NLKQVGR L+LLGKHKAA++VYDEA+ I  EDWE+WHN+GLCYM+LK ++++++ F Q+N + RHD+T+  MGKVF L     +A+ +Y EALEFSPE+PE+LTT+GLL+L+ G+N +AF+ LGN+LTHDP++PK ILAAGSIIQD+ DMDVAL+KYR++AVQ           G+       Y+A++ACLKR+LYLDPFEWI++YNLGLVHLNT Q AS+FH FS+SINLK DF  SYMYLAI+LA+L+D DNAC+AY+KA+ +E+D+L HLNYAVTLLN+ +  +AA+    F++LF ALD + +  D  +   R L
Sbjct:   64 AIARERRNYQIHLLYVRQDFKDCLVLIETVLAEFNGMCEYPIYVKALIKRQQGQIQESLQLFQAATALNPHNVANLKQVGRSLYLLGKHKAAIDVYDEAQRIGVEDWEIWHNKGLCYMYLKDYDQSVDCFRQANEVQRHDTTFTQMGKVFTLQENYKQAIEVYLEALEFSPENPEVLTTIGLLYLRLGENYRAFDFLGNSLTHDPKNPKTILAAGSIIQDHSDMDVALIKYRIAAVQTPNSAQLWNNIGMCFFGKQRYIASIACLKRALYLDPFEWIISYNLGLVHLNTGQCASAFHFFSSSINLKSDFPSSYMYLAITLAKLDDLDNACAAYEKAIGMESDHLFHLNYAVTLLNSGDETRAAQQLEEFEKLFGALDDETKGSDPDILLQRNL 456          
BLAST of mRNA_P-fluviatile_contig8.14453.1 vs. uniprot
Match: A0A067C533_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C533_SAPPC)

HSP 1 Score: 470 bits (1210), Expect = 5.260e-162
Identity = 243/396 (61.36%), Postives = 300/396 (75.76%), Query Frame = 1
Query:   64 RNWRIFATYARQEYPECLQIIEEQLHACNGLAEYPIYVKGQVLRSQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALEVYDEAKNIDS-EDWEVWHNQGLCYMHLKQFERALEAFVQSNSISRHDSTYLHMGKVFRLLGKPAEALAIYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YVAAVACLKRSLYLDPFEWIVAYNLGLVHLNTSQYASSFHHFSASINLKPDFAPSYMYLAISLARLEDFDNACSAYDKALDLEADYLTHLNYAVTLLNNDEPEKAAEHFGAFKRLFEALDPDAEQDD-EVVASSRALEEALRGV 1191
            +N+ I   Y RQEY ECL++IEE L   +GL E+PIYVK  +L+  GRIQESL LFQAATCLNP+N  NLKQVGR L+LLGKHKAA+EVY+E + +   EDWEV HN GLCYM+LK F+ A+EAF  +N++ RHD+T+L +GKV  L      A+ +Y EALEFSPESPELLTT+GLL+L+ G+N +AF+ LGN++THDPR+ K ILAAGSIIQD+ DMDVALVKYRV+AVQ           G+       +VAAVA LKR+LYLDPFEWI +YNLGLVHLNT QYAS+FH+FSA+INLKPDF  SYMYLAI+L RL+DF+NACSAYDKA+++EAD++ HLNYA+TL NNDE E+A   F  F+ +FE LD      D EV+   +AL  AL  V
Sbjct:   26 KNYLIHKLYLRQEYTECLRLIEEMLKEHHGLCEFPIYVKALILQRNGRIQESLQLFQAATCLNPENKDNLKQVGRSLYLLGKHKAAIEVYEETQKLPGLEDWEVSHNIGLCYMYLKDFDHAIEAFQHANNVHRHDTTFLQLGKVHTLRDDFKAAINVYLEALEFSPESPELLTTIGLLYLRIGENFRAFDYLGNSMTHDPRNAKTILAAGSIIQDHGDMDVALVKYRVAAVQTPNSAQLWNNIGMCFFGKQRFVAAVASLKRALYLDPFEWITSYNLGLVHLNTGQYASAFHYFSAAINLKPDFPSSYMYLAITLGRLDDFENACSAYDKAIEMEADHMFHLNYALTLFNNDELERAKVQFNKFEAIFETLDEATRSSDPEVMDQRQALLNALSTV 421          
BLAST of mRNA_P-fluviatile_contig8.14453.1 vs. uniprot
Match: A0A7S2C5V5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C5V5_9STRA)

HSP 1 Score: 469 bits (1207), Expect = 1.850e-161
Identity = 235/412 (57.04%), Postives = 303/412 (73.54%), Query Frame = 1
Query:   55 RERRNWRIFATYARQEYPECLQIIEEQLHACNGLAEYPIYVKGQVLRSQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALEVYDEAKNIDSE-----------------DWEVWHNQGLCYMHLKQFERALEAFVQSNSISRHDSTYLHMGKVFRLLGKPAEALAIYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQ------------------GLYVAAVACLKRSLYLDPFEWIVAYNLGLVHLNTSQYASSFHHFSASINLKPDFAPSYMYLAISLARLEDFDNACSAYDKALDLEADYLTHLNYAVTLLNNDEPEKAAEHFGAFKRLFEALDP-DAEQDDEVVASSRALEEAL 1182
            RE++N  I A Y R E+ EC+++IEEQL  C    EYP+YVK  +LR +G+IQESL LFQ+ATCLNP N +NLKQVG   +LLGKHK A++VY+EA+ I  E                 DWE+WHN+GLCY+H+KQ   A+E+F ++NSI RHD+TY+ +GKV++L     EAL +Y++A++FSPE+PELLTTVGL+ L+  +N KAFE LGN+LTHDPR+ K ILAAGSIIQDNQ+MD AL+KYRV+AVQ                    + AAV+CLKR+LYLDPFEWI+ YNLGLVHLNT QYAS+FH+FSASINLK DF  SYMYLAI+LARL+DF N+C+AY+KA+ +E D++ HLNYA+TL N+ E +KA  H G FK+L+  L+  D E D EV+A S+ L+EAL
Sbjct:   11 REKQNAFIHACYVRHEHDECMRVIEEQLSEC-AFCEYPLYVKALILRQRGKIQESLTLFQSATCLNPNNTANLKQVGHSYYLLGKHKQAIQVYEEAQRIGEENVRKRNEVGRQARLSADDWEIWHNKGLCYIHMKQLGLAIESFQRANSIQRHDATYMQLGKVYQLQENFEEALKVYQDAIDFSPENPELLTTVGLVWLRLQENPKAFEQLGNSLTHDPRNAKTILAAGSIIQDNQEMDTALIKYRVAAVQTPNSAQLWNNIGMCFFGKAFHTAAVSCLKRALYLDPFEWIICYNLGLVHLNTGQYASAFHYFSASINLKSDFPASYMYLAITLARLKDFPNSCTAYEKAISMEQDHMNHLNYAITLYNHGEVDKARTHHGIFKQLYAELNQEDVEHDYEVMAQSQGLQEAL 421          
BLAST of mRNA_P-fluviatile_contig8.14453.1 vs. uniprot
Match: A0A6U4RTW9_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4RTW9_HEMAN)

HSP 1 Score: 468 bits (1205), Expect = 2.630e-161
Identity = 233/390 (59.74%), Postives = 298/390 (76.41%), Query Frame = 1
Query:   55 RERRNWRIFATYARQEYPECLQIIEEQLHACNGLAEYPIYVKGQVLRSQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALEVYDEAKNID-SEDWEVWHNQGLCYMHLKQFERALEAFVQSNSISRHDSTYLHMGKVFRLLGKPAEALAIYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YVAAVACLKRSLYLDPFEWIVAYNLGLVHLNTSQYASSFHHFSASINLKPDFAPSYMYLAISLARLEDFDNACSAYDKALDLEADYLTHLNYAVTLLNNDEPEKAAEHFGAFKRLFEALDPDAEQDDEVVASSRA 1167
            R++RN+ I   Y R++Y ECL+++E+ L  C+ LAEYP+YVKG +LR +G I  SL LFQAAT LNP N +NLKQVG+ LFLLGKHK ALEVY+EA  +  SEDWEVWHN+GLC  +LK+ E A EAF+++NSI RHD+T+L +G++F        A+ +Y EALEFSPE+PELLTT+GLL+L+  +N +AF+ LGN+LTHDPR+PK ILAAGSIIQD+ D+DVAL+KYRV+AVQ           G+       YVAA+ACLK++LY DPFEWI++YNLGLVHLNT QYAS+FH+FS+SINLKPDFA SYM+L I+L+RL D DNACSAYDKA++++ DYL HLNYA+ L NND   KA +H   F+RLF+ LD +A+  D  V   RA
Sbjct:   21 RQKRNYLIHLLYVRKDYEECLRLVEDTLEQCDQLAEYPLYVKGLILRHRGMIPSSLKLFQAATILNPTNVNNLKQVGKSLFLLGKHKGALEVYEEALRLGHSEDWEVWHNRGLCLTYLKRTEEAQEAFMRANSIQRHDATFLQLGQIFTQQEDYKSAIDVYLEALEFSPENPELLTTIGLLYLRLSENFRAFDFLGNSLTHDPRNPKTILAAGSIIQDHSDVDVALIKYRVAAVQTPNSAQLWNNIGMCFFGKQRYVAAIACLKKALYHDPFEWIISYNLGLVHLNTGQYASAFHYFSSSINLKPDFASSYMHLGITLSRLSDIDNACSAYDKAIEMDDDYLFHLNYAIMLTNNDMIPKAKQHLAEFERLFDQLDAEAKASDADVTEQRA 410          
BLAST of mRNA_P-fluviatile_contig8.14453.1 vs. uniprot
Match: K3WTZ6_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WTZ6_GLOUD)

HSP 1 Score: 468 bits (1203), Expect = 6.970e-161
Identity = 230/386 (59.59%), Postives = 298/386 (77.20%), Query Frame = 1
Query:   64 RNWRIFATYARQEYPECLQIIEEQLHACNGLAEYPIYVKGQVLRSQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALEVYDEAKNIDS-EDWEVWHNQGLCYMHLKQFERALEAFVQSNSISRHDSTYLHMGKVFRLLGKPAEALAIYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YVAAVACLKRSLYLDPFEWIVAYNLGLVHLNTSQYASSFHHFSASINLKPDFAPSYMYLAISLARLEDFDNACSAYDKALDLEADYLTHLNYAVTLLNNDEPEKAAEHFGAFKRLFEALDPDAEQDDEVVASSR 1164
            RNW +   Y R E+ ECL+++E+ L    GL+EYP+Y+K  +LR  GRIQESL LFQAATCLNP N  NLKQVGR L+LLGKH AA+EVY+E   +   +DWE++H+ GLCYM+LK++E+A++ F  +N+I+RHD+T+L +GKV+ L      A+A+Y EALEFSPE+PE+LTT+GLL+L+ G+N +AF+ LGN+LTHDPR+PK ILAAGSIIQD+ DMDVALVKYRV+AVQ           G+       +VA+VACLKR+LYLDPFEWI +YNLGLVHLNT QYAS+FH FSA+INLKPDF  SYMYLAI+L RL+DF+NACSA++KA+++E D+L HLNYA+TL NNDE E+A   F  F+ +FEALD + +  D+ V   R
Sbjct:   32 RNWYLHRLYLRSEFKECLRVVEDVLKTHQGLSEYPLYIKALILRHSGRIQESLQLFQAATCLNPDNKENLKQVGRSLYLLGKHMAAIEVYEEILTMGRVDDWEIYHSIGLCYMYLKEYEKAVDNFQHANTINRHDATFLQLGKVYTLQEDFKAAIAVYLEALEFSPENPEILTTLGLLYLRIGENFRAFDYLGNSLTHDPRNPKTILAAGSIIQDHGDMDVALVKYRVAAVQTPNSAQLWNNIGMCFFGKQRFVASVACLKRALYLDPFEWITSYNLGLVHLNTGQYASAFHFFSAAINLKPDFPSSYMYLAITLGRLDDFENACSAFEKAIEMERDHLFHLNYAITLYNNDEMERAKVQFDRFEEIFEALDDETKNADQEVLEQR 417          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14453.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKV4_ECTSI2.070e-24183.50Bardet-Biedl syndrome 4 n=1 Tax=Ectocarpus silicul... [more]
A0A8J6CHX9_DIALT7.360e-17261.68Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A6T9B7X8_9EUKA8.490e-17161.15Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A6S9RQ16_CHRCT2.540e-16860.86Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S3GDF2_9EUKA3.270e-16759.40Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A7S0X8L8_9CHLO9.620e-16358.52Hypothetical protein n=2 Tax=Mantoniella antarctic... [more]
A0A067C533_SAPPC5.260e-16261.36Uncharacterized protein n=4 Tax=Saprolegniaceae Ta... [more]
A0A7S2C5V5_9STRA1.850e-16157.04Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6U4RTW9_HEMAN2.630e-16159.74Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
K3WTZ6_GLOUD6.970e-16159.59Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:1599408..1606479 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score672.2
Seed ortholog evalue1.5e-190
Seed eggNOG ortholog2880.D8LKV4
Preferred nameBBS4
KEGG koko:K11447,ko:K16531
KEGG Pathwayko05202,map05202
GOsGO:0000003,GO:0000086,GO:0000226,GO:0000242,GO:0000278,GO:0000281,GO:0000288,GO:0000291,GO:0000785,GO:0000910,GO:0000956,GO:0001085,GO:0001103,GO:0001654,GO:0001708,GO:0001750,GO:0001754,GO:0001764,GO:0001838,GO:0001841,GO:0001843,GO:0001894,GO:0001895,GO:0001917,GO:0001947,GO:0002009,GO:0003006,GO:0003007,GO:0003008,GO:0003013,GO:0003073,GO:0003085,GO:0003143,GO:0003352,GO:0003356,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005929,GO:0006139,GO:0006325,GO:0006401,GO:0006402,GO:0006464,GO:0006482,GO:0006725,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007098,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0007600,GO:0007606,GO:0007608,GO:0007610,GO:0008015,GO:0008064,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008214,GO:0008217,GO:0009056,GO:0009057,GO:0009506,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009892,GO:0009933,GO:0009934,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010564,GO:0010605,GO:0010629,GO:0010638,GO:0010639,GO:0012505,GO:0014020,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016331,GO:0016358,GO:0016462,GO:0016477,GO:0016569,GO:0016570,GO:0016577,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019216,GO:0019221,GO:0019222,GO:0019439,GO:0019538,GO:0019953,GO:0021537,GO:0021543,GO:0021544,GO:0021591,GO:0021756,GO:0021761,GO:0021766,GO:0021915,GO:0021987,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030054,GO:0030154,GO:0030182,GO:0030534,GO:0030832,GO:0030833,GO:0030837,GO:0030900,GO:0031023,GO:0031090,GO:0031175,GO:0031253,GO:0031333,GO:0031344,GO:0031346,GO:0031410,GO:0031514,GO:0031667,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032095,GO:0032096,GO:0032098,GO:0032099,GO:0032101,GO:0032102,GO:0032104,GO:0032105,GO:0032107,GO:0032108,GO:0032231,GO:0032271,GO:0032272,GO:0032391,GO:0032400,GO:0032401,GO:0032402,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032507,GO:0032535,GO:0032870,GO:0032879,GO:0032886,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033059,GO:0033210,GO:0033365,GO:0034097,GO:0034260,GO:0034451,GO:0034452,GO:0034453,GO:0034454,GO:0034464,GO:0034504,GO:0034613,GO:0034641,GO:0034655,GO:0034708,GO:0035050,GO:0035097,GO:0035148,GO:0035176,GO:0035239,GO:0035295,GO:0035327,GO:0035845,GO:0035869,GO:0036064,GO:0036211,GO:0038108,GO:0040008,GO:0040011,GO:0040012,GO:0040014,GO:0040018,GO:0042221,GO:0042461,GO:0042462,GO:0042592,GO:0042995,GO:0043005,GO:0043009,GO:0043014,GO:0043086,GO:0043087,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043412,GO:0043473,GO:0043928,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044320,GO:0044321,GO:0044380,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044430,GO:0044431,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044451,GO:0044459,GO:0044463,GO:0044464,GO:0044666,GO:0044703,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0045165,GO:0045185,GO:0045444,GO:0045494,GO:0045724,GO:0045776,GO:0045927,GO:0046483,GO:0046530,GO:0046548,GO:0046700,GO:0046907,GO:0048232,GO:0048468,GO:0048487,GO:0048507,GO:0048509,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048532,GO:0048562,GO:0048568,GO:0048583,GO:0048585,GO:0048592,GO:0048598,GO:0048609,GO:0048638,GO:0048639,GO:0048646,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048854,GO:0048856,GO:0048869,GO:0048870,GO:0048871,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0050893,GO:0050896,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051270,GO:0051276,GO:0051301,GO:0051302,GO:0051336,GO:0051346,GO:0051457,GO:0051492,GO:0051493,GO:0051494,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051651,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051705,GO:0051716,GO:0051726,GO:0051875,GO:0051904,GO:0051905,GO:0055044,GO:0055087,GO:0060170,GO:0060249,GO:0060255,GO:0060271,GO:0060295,GO:0060296,GO:0060322,GO:0060324,GO:0060429,GO:0060491,GO:0060562,GO:0060606,GO:0060612,GO:0060613,GO:0060632,GO:0061371,GO:0061448,GO:0061512,GO:0061640,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070076,GO:0070491,GO:0070727,GO:0070887,GO:0070925,GO:0070988,GO:0071310,GO:0071345,GO:0071495,GO:0071539,GO:0071557,GO:0071704,GO:0071840,GO:0071944,GO:0072175,GO:0072359,GO:0072393,GO:0072595,GO:0072698,GO:0080090,GO:0090066,GO:0090304,GO:0090596,GO:0097458,GO:0097499,GO:0097708,GO:0097730,GO:0097731,GO:0097733,GO:0098588,GO:0098590,GO:0098791,GO:0110020,GO:0110053,GO:0120025,GO:0120031,GO:0120032,GO:0120034,GO:0120035,GO:0120036,GO:0120038,GO:1901360,GO:1901361,GO:1901564,GO:1901575,GO:1902017,GO:1902019,GO:1902115,GO:1902117,GO:1902494,GO:1902855,GO:1902903,GO:1902904,GO:1903047,GO:1903546,GO:1905508,GO:1905515,GO:1990234,GO:2000145
EggNOG free text desc.cellular component assembly
EggNOG OGsCOG0457@1,KOG1124@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionBardet-Biedl syndrome 4
Ec32 orthologEc-11_005700.1
Exons10
Model size1194
Cds size1194
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14453.1prot_P-fluviatile_contig8.14453.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 1599408..1606479 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817236.0306575-CDS-P-fluviatile_contig8:1599407..15994881622817236.0306575-CDS-P-fluviatile_contig8:1599407..1599488Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1599408..1599488 -
1693571609.887361-CDS-P-fluviatile_contig8:1599407..15994881693571609.887361-CDS-P-fluviatile_contig8:1599407..1599488Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1599408..1599488 -
1622817236.044079-CDS-P-fluviatile_contig8:1600003..16001201622817236.044079-CDS-P-fluviatile_contig8:1600003..1600120Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1600004..1600120 -
1693571610.195787-CDS-P-fluviatile_contig8:1600003..16001201693571610.195787-CDS-P-fluviatile_contig8:1600003..1600120Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1600004..1600120 -
1622817236.0540752-CDS-P-fluviatile_contig8:1600578..16006841622817236.0540752-CDS-P-fluviatile_contig8:1600578..1600684Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1600579..1600684 -
1693571610.5066335-CDS-P-fluviatile_contig8:1600578..16006841693571610.5066335-CDS-P-fluviatile_contig8:1600578..1600684Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1600579..1600684 -
1622817236.0653653-CDS-P-fluviatile_contig8:1600996..16011301622817236.0653653-CDS-P-fluviatile_contig8:1600996..1601130Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1600997..1601130 -
1693571610.523602-CDS-P-fluviatile_contig8:1600996..16011301693571610.523602-CDS-P-fluviatile_contig8:1600996..1601130Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1600997..1601130 -
1622817236.0808635-CDS-P-fluviatile_contig8:1602653..16027201622817236.0808635-CDS-P-fluviatile_contig8:1602653..1602720Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1602654..1602720 -
1693571610.533962-CDS-P-fluviatile_contig8:1602653..16027201693571610.533962-CDS-P-fluviatile_contig8:1602653..1602720Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1602654..1602720 -
1622817236.0928874-CDS-P-fluviatile_contig8:1603355..16035071622817236.0928874-CDS-P-fluviatile_contig8:1603355..1603507Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1603356..1603507 -
1693571610.54449-CDS-P-fluviatile_contig8:1603355..16035071693571610.54449-CDS-P-fluviatile_contig8:1603355..1603507Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1603356..1603507 -
1622817236.1037638-CDS-P-fluviatile_contig8:1604251..16042991622817236.1037638-CDS-P-fluviatile_contig8:1604251..1604299Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1604252..1604299 -
1693571610.5553043-CDS-P-fluviatile_contig8:1604251..16042991693571610.5553043-CDS-P-fluviatile_contig8:1604251..1604299Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1604252..1604299 -
1622817236.115556-CDS-P-fluviatile_contig8:1605102..16052431622817236.115556-CDS-P-fluviatile_contig8:1605102..1605243Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1605103..1605243 -
1693571610.5665889-CDS-P-fluviatile_contig8:1605102..16052431693571610.5665889-CDS-P-fluviatile_contig8:1605102..1605243Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1605103..1605243 -
1622817236.1290424-CDS-P-fluviatile_contig8:1605634..16058011622817236.1290424-CDS-P-fluviatile_contig8:1605634..1605801Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1605635..1605801 -
1693571610.579222-CDS-P-fluviatile_contig8:1605634..16058011693571610.579222-CDS-P-fluviatile_contig8:1605634..1605801Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1605635..1605801 -
1622817236.1433213-CDS-P-fluviatile_contig8:1606298..16064791622817236.1433213-CDS-P-fluviatile_contig8:1606298..1606479Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1606299..1606479 -
1693571610.597248-CDS-P-fluviatile_contig8:1606298..16064791693571610.597248-CDS-P-fluviatile_contig8:1606298..1606479Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1606299..1606479 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14453.1

>prot_P-fluviatile_contig8.14453.1 ID=prot_P-fluviatile_contig8.14453.1|Name=mRNA_P-fluviatile_contig8.14453.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=398bp
MSPPPVHRRDDGGEGVILRERRNWRIFATYARQEYPECLQIIEEQLHACN
GLAEYPIYVKGQVLRSQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFL
LGKHKAALEVYDEAKNIDSEDWEVWHNQGLCYMHLKQFERALEAFVQSNS
ISRHDSTYLHMGKVFRLLGKPAEALAIYEEALEFSPESPELLTTVGLLHL
QQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSA
VQGLYVAAVACLKRSLYLDPFEWIVAYNLGLVHLNTSQYASSFHHFSASI
NLKPDFAPSYMYLAISLARLEDFDNACSAYDKALDLEADYLTHLNYAVTL
LNNDEPEKAAEHFGAFKRLFEALDPDAEQDDEVVASSRALEEALRGV*
back to top

mRNA from alignment at P-fluviatile_contig8:1599408..1606479-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14453.1 ID=mRNA_P-fluviatile_contig8.14453.1|Name=mRNA_P-fluviatile_contig8.14453.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7072bp|location=Sequence derived from alignment at P-fluviatile_contig8:1599408..1606479- (Porterinema fluviatile SAG_2381)
ATGTCGCCGCCGCCAGTGCATCGGCGCGACGACGGGGGGGAGGGGGTGAT CCTCAGAGAGCGTCGGAACTGGCGGATCTTCGCCACCTACGCTAGGCAGG AGTATCCGGAGTGCCTCCAGATAATCGAGGAGCAGCTGCACGCTTGTAAT GGCCTGGCCGAGTACCCGATCTACGTCAAGGGTAGGTGTTCAATCAGCGA GCTGCAGATGGCGAAAAAAAACGACCTCGTGCGCAACGACGTGAAAAATA TTCTTGGTTGGCGTGGAAGCACATCCTGCAGGCTAGACTAGATATCTCCA CCCGGAGCGAAAAACTGCAAGGCCGCGTGTATGAAGGCAGGCCGTTGTCT CACATATTCGTACGACGGTGACATGATTCGGTAGGCAATCCGCAGACGAA GAGTGTGCGAGAGAGCACACGCCGCAACATGGTGGCGGTGCAGGCACATC TCACTGACCCTTATTCTTATTTGAACTGTACCAGTACCAGCGACCTTCAG ACACCGAAAAGTGAAAAAGGTGTGGCTGTCTTCTTGCCTTCAAATAAAGT AAAGGCATTCAGCAGCAAGGTTCACTAGCAATCTGTCAGTGTTCGGTGGC CTACAGCACTCGGCAATTGATATCCACGCCAATTTCCGTATTACCAATGG GGACGAGACGGTGTTTTCGTTTGGTCAGGTCAGGTCTTGCGATCTCAGGG CCGGATACAGGAGTCGCTGGCGCTGTTTCAGGCAGCCACTTGCCTCAACC CGCAGAACCCGTCCAATCTGAAGCAAGTCGGCCGGTGCCTATTCCTCCTA GGAAAGCACAAAGCCGCACTGGAGGTCTACGACGAGGCGAAAAATGTTGA GTACAGGACAAACGTGATCCGGTAACCGGATGCACTTCGTGCAGGGCACC AGCACTCATGAATATGTTTTTCGCTTTTTGAGTAATACCTTCGTGCGGGA CAGCGGGCGTCCACCTATAGACGAATATCCTTCTTGAACGAATCTGGTTC GACGCTTTTCTACTGTTAGAACAAGTAAACGAGGATTTCCAGAGGATGCG CAGTGTAGAGCAAAAAGAACAATGCTCCTGCCCTGGCAGGACTGAACCGT TGATGTTCACCTGCTTGGTCGAACAAGTCTTTCATATTGTGCTGTTTTCG GCGTGCTTCAGAGCCGCGGCTATTGCGGACGCCATCAGCCGTGACGCGAT ACATATCTTGCCGATGTATCCGTGACGCAATGACAGATTGACTCCGAGGA CTGGGAGGTGTGGCATAACCAAGGGCTGTGCTATATGCACCTCAAGCAGT TCGAGCGTGCGCTGGAAGCATTCGTACAGTCCAACTCCATCAGCAGGCAT GATTCTACCTACTTGCACATGGGCAAGGTAAAGATGTGGCTCGATTCTAA GCTTTGTCATCTCTTCTTCGTTGATGCAGCTGTCTCGATAATTTTTTACT CAAAAGTGTATATTTTCGGGGGAGGCGTCTTGAACAAACATGCTGCGCAC CTTCTTGAAAAAATAGTCTGCGCCATCAGTTTATGGATCGTGTCGCTTCA CGAAGGCTTCGCAAGCTTCGCAAGCTTCCCTGGATGAATAAAGGAAGTCC GCGACGGGTGGTATGATCCCCTCTAGTTGCGCCGTTTGTAGAGTTCAAAA GTTTAATTTATGGGTGGAAACGGTATTGTGCACATTTCAGGGACAACACC CTCCACTCCGATGAGATGCATTACTTCAATATTAGGACTTGTTTTCGGCT AAAATTGCCAGCCATACAACTTTGTCAACAATTGTTGTATTTGTGGTCGC TGTTATTGGTCACTGTTTCTGTCTGAGCCTGAGGCGTGGTAAAAGGTAGC ATGGCGGCGGTTGTCTCGATACGTAATGCCGAGTTCCACCTTCGTCCGCG TTTCTCCTCAAACACGCTCGTTTGTGCCTCTGGTATCGGTCACGACTTTA ACAAACACGGAATGCAGTCCCTACGCTGTTCACGGGGCAATCGCTTCATA TGCTCCAAGCACGGGAAATAGCACGATACGACGAACGATGCGCTCGGAAC GCCCAGTTCCAACCCCAAATCGCGGAAGCTCGTCTCCGGACGTGATTATT TGTTGCGGCCATTTGTACCACCATTGCTTACCCCGTCCTATGGTCACCGC GCACTTGCTTATCGTGCACCTGCTGCGAAGGTTTTCCGGCTGCTCGGTAA GCCGGCGGAGGCCTTGGCTATTTACGAGGTGAGGACAACAAACCGGCACG GATTCATGCAACAGGTCGCCATAGATACAAAATGTCTTGCTTCTTCTCGA TGTGGAAACGAAGCTGGTGATTGCGTGAAGACGAGTTCGAGCAGGGTTTT TTGCGTGCACAAGACTTATTGTAGTCCAGGTACTCGTCGGTGGAAGGTGA GATCGACACGCCCAGCACAGTAATAGTGGAAGCCTTTAGTTTGCGGTACC AGGGTATCCCACCTGCCCACCACCGTTAATGGCGCATGCCCAGTGAACAG CACAGGCAAACACGCGAAAACGAAATTGCGTCGTAGTGTCGTTGACCATT GTCGCCCGCAGAGCCCCTGTCGGAGGTGGCTAGCACTCACTCAAAGGGCG CACCGCGCTCGCGCGCCACACCCGAAGGCCTTGATGATTGCGGGGCGCGA CATACCTGTACCAAACACGCCTCTGCCTTGTGTTCGCGCCCATACTTTTG TCGGGTTCTATCGAGGCTGCGCCACTTGCGTTGGGTTTCCTTGTCATTCC CCCCACTCACAATCGTATCCCAGACGCTTATTCCGATTGCCCCTCCATGA GCTCTGTTCTCGACGAAAGCCCATCCTTTGTGAGGTGCGTTCCTTTCAGC GGATCAAACACGTGCGTGATGCTCGGTTGTACCTCCAGACGTGATCACAC ACGCTGCTTCACGAAGCGTTTCGGTCGCATTTTTCTCGACTGTTGTCTCG TTTTCGTCGGATCTCATTGCAGGAGGCTCTGGAATTCTCGCCCGAGAGCC CCGAGCTCCTTACTACGGTCGGACTGTTGCACCTGCAGCAGGGCGACAAC CAGAAGGCGTTCGAGAGTCTCGGCAACGCACTAACGCACGACCCGAGGGA CCCTAAGGCCATTCTGGCCGCGGGGTGAGTGAGAGGTTTCGGGGTAGAAA GCATATGTCGTCGACATCTCCCACTGAGGGAGCGTGTGATGAACCAGTTT CTCGTTGCTTCGCTGGTACCTCCTGCCGGAATACTTCCCGCGCTCTATTT ACTTCCACTTGGCTTCAACAGCGATGTCAACCCCGCCCCCTCGGTAGAGC GAATTGACCATGCACTTCGCCGTCACTCGCAGAAACGATGCATTTTGAGC AAATGCGCGGGGAACCAAGCTCAATGTGCATTTCAGGTGAATCGTGTCTC GCAGTTTTTGGAACGATTTGCTCTGGTTCTATAATTCCCCGACTTGAGAG TTGAGTATTATCTCAGGTTCTACGATTCCCAAACTTGAGAGTCGAATGTT ATCCCCCCTCGTCGTCGCAGAGGAATGAAGATCGAAGCATTCTGGGTCTA CTCTGGGTCTACTCGTATCCAGACTCGAGCAAGCCTTCATAACTAGGCTA CACCTGCAGACACACTTGCTGCCCTTTCCCTCGATCGTACAGCCGCGCTG CCAAACAGTTGAATGCATTCCCGCAAACGAAGCACAGTAGCATGGTCAAG CGAGCAGCGTCATCCCAGTGCTCTCGAGCACCCATGCGCCCCCCGAACTC ACTGATCAGGTCGATAATCCAGGATAACCAGGACATGGACGTGGCGCTGG TGAAGTACCGAGTGTCGGCGGTACAGGTATGCCACAAAACAATCCGTTTT GAGGGAGTCAGAAGAAGCAAACGGTGCAAAGCTTGGAATCGAGTCGTTTT ATGCCTCCGCCCCAAAGCCCCTCAGTATCGGAAGGGCACCATCAATGGTG TTGGCCTTGCGTGGTGCCGCAAAGAGCAAGGCCTCCGACAGGCGAGGTCA ATTAAACCAAAGCAAAGGCGATCAAGCACTGTGTCATCTACAAGCACCTG TTGATAAATGCTGGTTGCCGATGTAGGGCCAACCAAATCTCTATGCGCAC TGCACCAATACCGACGCGTCCCCAACTATGAAAAGTGTCGGTCGCACGCA GAGTGGTGTTGTTAGCGGGCACATGCCCGCAACATAGAACGCACAGGTCT GTCGATCAGCTCCTCCCCGGAGCACGGTTTCCATGTACTGCTCCTAGCCT TTATGGTTACAACGGCCTTGAACAGCACCGAAAAAGGGGTGCGCTTGATG AGAGCTTTCCTGACGCCATTCAATATGTCCGAGCTGATACCGACAATACG CTGATCAGCCAATCAGACTGTGGCGACAGTCGTGTTGGGAATGGCTCGGC GTTTACAGCGGAGGGGGCGGGGGGCCGGGGGGGCGGGGGGGCGTCGAGGG CTTCCCTGGTATGGGTTTTGGCACAACACACGCGGTTCGCTTGTTAGCAG GAGCGCTTGTCCAGGGGGGAGGGACTCGAAAGAGTATGAGTGAGCCCCAT CAGGTCGGTCCGGCTGGAGCGTGCAATTCGCCCGCCGTCCCGCGGCGGTC GGCCACGCCATCGGTCATGATCCCCTCGTCATCCCTCACTCCTTGTAGCC AAAGAACACAAATAAAGGCCAAAGGAGGGTGTGGGGACTACATTCATGCA TTGGAGTGTCGTTGTTTCCTGGTGTTGCGAATGGGGCCAGAGAAGGCACA GTGGTGGACCACAGGCGGCGAAAAAAGAGCTAAAGATGAGCAAACTGTAT GAATTACAACCCACGACTGGGTCGTCGGTGTGTCCAACGATCGCGTAAGA CAAGCGCCACGATCAAGCAACAAGCTTGTAATCCCCTGCCCTGCCGGTAT CTTTGCTCATGCTAGCAGCAATTCCGAACGGTGCAGGTCCCCGCATCACT GTGCATGCCTTCTCAGTCAAAATCATTCATATATTAGCCTGATTTCTAGA CCACGCGTTTCTTGCGTGCTTTCTTGCTCTCTTTCTTGCTGTCTCAGACT CCAAACTCTGCGCAGCTGTGGAATAATATCGGGATGTGCTTCTTCGGGAA GGTGAGGGAAGCCAAGGTCTCGAGTTTTCGTGGTAAGGGAAAGAGCGCAA GCGGAAGACCACGGTTGGCCTGGCCCGTGCATCGCAGAACCCCCGTGCTG ATACTCTCAACACGATCTGTCTTTCGCCGTCTCCTCACCCCGAATCGGAC AACACCCCCTCTTGAACCATTTCTCTTGTGTTCCGGCTGAAATCGCGGGC ACCACACCTCGTGTCCCGACACCCGCGCATCCCTGCGCGATGGATCAAGG GCTTGTACGTAGCGGCGGTGGCGTGCTTGAAACGCTCTCTCTACTTGGAC CCATTCGAATGGATCGTCGCCTACAACTTAGGCCTGGTGCACCTCAACAC GTCCCAGTACGCCTCTTCCTTCCACCACTTTAGGTGCGTAGTTCTTTTCC TTCGATATGGATCCTTTTCAATCGGAATCTGATCTCGGAGATCTTTTTCA GCCTACGCTTAAGACGCCAATTTAATATCCCTTCTCGACCACTCACGTAC TCGCTTTCGTAGCTTGTCGGTCAATTCGTTCTGTAGCTCTGCGAGCTACG CAATTCCCGATTACGCCGCGCCTTGCCGTCCACAGAACTAGATCGCACGC TCCTTCGCCGTCGTTCCAGACGCTTTGCTGAGTACGTCTTCTCTTCGTAG CAATGCTGCCTACAACGTGTCCCTGTCTTGTCCAACCGGCGGCAGCGCGT CCATCAATCTGAAGCCCGACTTCGCGCCGTCCTACATGTACCTGGCCATA TCCCTGGCCAGGTTGGAGGACTTCGACAATGCGTGTAGCGCCTACGACAA GGTAAAGCACGCGACCTCCAATTCGAAGATCCAGGGTTCTACCTGGCGCA GCCATTGCATTGCAGCAACAGCAGGAAAAAGCATTCCGCCGGATTCGTGC CGATTGGAGCACACTTCGAGAGCGGTCTCAATCGCGCAATGTGTAGCTAG AACCCTTGCAACTTGGTTCCTCACCACAAGTTGTTGGCATTCACGAAATT CACAATGACTGGTTCAGGACTTCGTCGTTTGGCCCGCGCGAGCTTTTCCC TCCAGGCGTAGATGTGACCGGCTGCGACTGAAGTGGTATGATTTTTTTTT CAATGGGATTTGACGTTTCAGGCCTTCGATCTAGTGCAAGGCTCCCTCAG ATCATTCACGGAAGGAATCTGAGGAAAGATTAGCTGATCGCCGGCCGCAC TTGCATCCTTCATGTGCGTGAGTGTGCGCGCGTTGCGGCGAACACTGCCT CCCTTGCAGGCCTTGGACCTCGAAGCTGATTACTTGACGCACCTGAACTA CGCGGTGACTCTGCTGAACAACGACGAGCCCGAGAAGGCGGCGGAACACT TCGGCGCCTTCAAGCGGCTTTTCGAGGTCGTTGCCCGGATTGCGGTTTTG CCTCTTTCTTTCTTTTTTCCTGGTGGCCTTGTAACTTGAGTTTCGGATTT CCAGGACCGTTCAAAGTCCTTGTTGTGAAAAAAACGGAAAATGGTGCGGC TTTCCATGGTCGTACGAGGGGCCTACTACAGGCACGAGGTTTCGAAAAAA ATATTCGAGACCATGACGCGCAGAGAGCATCAAGCGATTACAACAACTAG CGGATGGAATGCGGAGAGGGCGCAGTTATGGTTGCTTTTTCGAGTCAGCT ATTTTTCCTCTCCCTCTCCTATATCTCTCTCCGAAATGCTCCCACCATTC ACTTTCTCTGTGAAACCCTGCGCAAAGCGTTCAAATGTGTAGCTTTGATA TTATCTACAGCAGTATTCCTGCTGAGTTTTTCCATACCCACTGAACCCCC GCTCACTTGTACGTCCCTTTCCGTCGTCACCGTCCTCCATCAACACAAAT GTCGACATGAACCGTCGACTATCGGTACCGCGCCATCTTAGGCTCTCGAT CCCGATGCCGAGCAGGACGACGAAGTTGTAGCGAGCAGTCGGGCCCTTGA GGAAGCGCTTCGGGGTGTTTGA
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig8:1599408..1606479-

>mRNA_P-fluviatile_contig8.14453.1 ID=mRNA_P-fluviatile_contig8.14453.1|Name=mRNA_P-fluviatile_contig8.14453.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2388bp|location=Sequence derived from alignment at P-fluviatile_contig8:1599408..1606479- (Porterinema fluviatile SAG_2381)
ATGTCGCCGCCGCCAGTGCATCGGCGCGACGACGGGGGGGAGGGGGTGAT
CCTCAGAGAGCGTCGGAACTGGCGGATCTTCGCCACCTACGCTAGGCAGG
AGTATCCGGAGTGCCTCCAGATAATCGAGGAGCAGCTGCACGCTTGTAAT
GGCCTGGCCGAGTACCCGATCTACGTCAAGGATGTCGCCGCCGCCAGTGC
ATCGGCGCGACGACGGGGGGGAGGGGGTGATCCTCAGAGAGCGTCGGAAC
TGGCGGATCTTCGCCACCTACGCTAGGCAGGAGTATCCGGAGTGCCTCCA
GATAATCGAGGAGCAGCTGCACGCTTGTAATGGCCTGGCCGAGTACCCGA
TCTACGTCAAGGGTCAGGTCTTGCGATCTCAGGGCCGGATACAGGAGTCG
CTGGCGCTGTTTCAGGCAGCCACTTGCCTCAACCCGCAGAACCCGTCCAA
TCTGAAGCAAGTCGGCCGGTGCCTATTCCTCCTAGGAAAGCACAAAGCCG
CACTGGAGGTCTACGACGAGGCGAAAAATGTCAGGTCTTGCGATCTCAGG
GCCGGATACAGGAGTCGCTGGCGCTGTTTCAGGCAGCCACTTGCCTCAAC
CCGCAGAACCCGTCCAATCTGAAGCAAGTCGGCCGGTGCCTATTCCTCCT
AGGAAAGCACAAAGCCGCACTGGAGGTCTACGACGAGGCGAAAAATATTG
ACTCCGAGGACTGGGAGGTGTGGCATAACCAAGGGCTGTGCTATATGCAC
CTCAAGCAGTTCGAGCGTGCGCTGGAAGCATTCGTACAGTCCAACTCCAT
CAGCAGGCATGATTCTACCTACTTGCACATGGGCAAGATTGACTCCGAGG
ACTGGGAGGTGTGGCATAACCAAGGGCTGTGCTATATGCACCTCAAGCAG
TTCGAGCGTGCGCTGGAAGCATTCGTACAGTCCAACTCCATCAGCAGGCA
TGATTCTACCTACTTGCACATGGGCAAGGTTTTCCGGCTGCTCGGTAAGC
CGGCGGAGGCCTTGGCTATTTACGAGGTTTTCCGGCTGCTCGGTAAGCCG
GCGGAGGCCTTGGCTATTTACGAGGAGGCTCTGGAATTCTCGCCCGAGAG
CCCCGAGCTCCTTACTACGGTCGGACTGTTGCACCTGCAGCAGGGCGACA
ACCAGAAGGCGTTCGAGAGTCTCGGCAACGCACTAACGCACGACCCGAGG
GACCCTAAGGCCATTCTGGCCGCGGGGAGGCTCTGGAATTCTCGCCCGAG
AGCCCCGAGCTCCTTACTACGGTCGGACTGTTGCACCTGCAGCAGGGCGA
CAACCAGAAGGCGTTCGAGAGTCTCGGCAACGCACTAACGCACGACCCGA
GGGACCCTAAGGCCATTCTGGCCGCGGGGTCGATAATCCAGGATAACCAG
GACATGGACGTGGCGCTGGTGAAGTACCGAGTGTCGGCGGTACAGGTCGA
TAATCCAGGATAACCAGGACATGGACGTGGCGCTGGTGAAGTACCGAGTG
TCGGCGGTACAGGGCTTGTACGTAGCGGCGGTGGCGTGCTTGAAACGCTC
TCTCTACTTGGACCCATTCGAATGGATCGTCGCCTACAACTTAGGCCTGG
TGCACCTCAACACGTCCCAGTACGCCTCTTCCTTCCACCACTTTAGGGCT
TGTACGTAGCGGCGGTGGCGTGCTTGAAACGCTCTCTCTACTTGGACCCA
TTCGAATGGATCGTCGCCTACAACTTAGGCCTGGTGCACCTCAACACGTC
CCAGTACGCCTCTTCCTTCCACCACTTTAGCGCGTCCATCAATCTGAAGC
CCGACTTCGCGCCGTCCTACATGTACCTGGCCATATCCCTGGCCAGGTTG
GAGGACTTCGACAATGCGTGTAGCGCCTACGACAAGCGCGTCCATCAATC
TGAAGCCCGACTTCGCGCCGTCCTACATGTACCTGGCCATATCCCTGGCC
AGGTTGGAGGACTTCGACAATGCGTGTAGCGCCTACGACAAGGCCTTGGA
CCTCGAAGCTGATTACTTGACGCACCTGAACTACGCGGTGACTCTGCTGA
ACAACGACGAGCCCGAGAAGGCGGCGGAACACTTCGGCGCCTTCAAGCGG
CTTTTCGAGGCCTTGGACCTCGAAGCTGATTACTTGACGCACCTGAACTA
CGCGGTGACTCTGCTGAACAACGACGAGCCCGAGAAGGCGGCGGAACACT
TCGGCGCCTTCAAGCGGCTTTTCGAGGCTCTCGATCCCGATGCCGAGCAG
GACGACGAAGTTGTAGCGAGCAGTCGGGCCCTTGAGGAAGCGCTTCGGGG
TGTTTGAGCTCTCGATCCCGATGCCGAGCAGGACGACGAAGTTGTAGCGA
GCAGTCGGGCCCTTGAGGAAGCGCTTCGGGGTGTTTGA
back to top