mRNA_P-fluviatile_contig8.14428.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14428.1
Unique NamemRNA_P-fluviatile_contig8.14428.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig8.14428.1 vs. uniprot
Match: D7G2L9_ECTSI (Peptidase S16 lon domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2L9_ECTSI)

HSP 1 Score: 748 bits (1930), Expect = 8.780e-254
Identity = 457/727 (62.86%), Postives = 511/727 (70.29%), Query Frame = 3 
Query:  117 ITVQAAVNAHDSAKAAVADCLERVLGSGANTPATTFAVLFFEGHDQAGVQDALNSFAQRRPQAPPVIGCSLGENAYERQTRRLRQDQSARRLALISAPSTGKPGQKLLPWSPPSPSET------DWSQELPDPFRSPKIVTVLGLGFEKEDAKGGDKVGGDGGRIEALPVYAEGGSFPNIAGKDSVSRIFGMPREKPPLFFLLSQDDQS---QDLQETNRRLENLLPMSGRLCALSSGDPSSVVSTFPVGDAEAPVRGVCLMGDISLQEQARLARKTLGAFGFSAIIVSGDVCNELFVPAHPSAAESGSLSSAFSSEAAAATKAGGTLERVQETLRMAVRQAERERRWKEQQRQ-QLGVFKVDEVVFPGMTRRFRIFEPRYRALVKQCLADDVPLVMLPLSRGGNTVATAARVTGLFNVEEDGRCEVEITGIARCKVKTMWMKGESFGLFEAEVELFADEDYNQGAVA-AEGREGVEKDEEGISRARHAAGASGRAAMSGXXXXXXXXXXXXXXXXXXXAEEVGLAANLPELERLRIEVSAIMQKELHRTRTQGRSPLWPGWDGSVSRNDALAAFA-ATPPLPTPLLIKTAGDDNGDGEGGGEESQGGQGSGGTTA----------------AEPKTGIDSRGGGGGIGGMDPCDLDAEALSFWAAQNVEAGALVKHEWLSSTSTAERLRGVRDLCRFALARHRDRSGVDGAILSRPLSALRDLTFR 2213
            + V AAVNA    + AV DCLERVLG     P++ FAV+FFEGHD AGVQ ALNSFA+RRPQAPPVIGC LGE+ YE+Q RRL+Q QSARRLAL S+  +GKPG KL PWS P+ S T      + SQE  + FRSPKIVTVLGLGF  E+  GG   GG  GR+EALPVYAEGG FPNI GKDSV RIF +P+EK PLFF+LS+DDQS    DLQ+TN+RL NLLP S RLCALSSG+PSSVVS+FP GDA  P+ GVCL GDI LQEQA LARKTLGAFGF+AI  SG VC+ELFVP+ P AA      S+   +         TLERVQE +R   +Q+             QLGVFKVDEVVFPGMT+RFRIFEPRYRALVKQCLA+D PL +LPLSRGGNTVAT ARV+GL NVE DGRCEVEITGIARC VKTMWMKGESFGLFEA VELF DE       A    R   E+  +    A  A   SG+   +G    X XX  XXXXXXX      GL A LPELERLRIEVSAIMQKEL+RTRT+GRSPLWPGWDGSVS  DA AA   A+PPLPTP  IKTA D          E+    GSG  +                      G+  +     IGG+DPCDL+AEALS+WAA NVEAGAL+KHEWLSSTST+ RLRGVRDLCRFALARHRDRS VDG +LSRPLSALRDLT R
Sbjct:   29 LRVVAAVNATTQTETAVDDCLERVLGPD-TAPSSAFAVVFFEGHDHAGVQGALNSFAERRPQAPPVIGCGLGESPYEQQKRRLKQQQSARRLALASSSPSGKPGHKLTPWSSPASSATALSSSDEPSQESSESFRSPKIVTVLGLGFHGEELAGG---GGGRGRVEALPVYAEGGCFPNILGKDSVVRIFELPKEKQPLFFMLSKDDQSVPASDLQDTNQRLGNLLPNSTRLCALSSGNPSSVVSSFPAGDA--PMVGVCLTGDIPLQEQAGLARKTLGAFGFNAISASGAVCDELFVPSQPRAAWLDPRPSSIKMD---------TLERVQEQVRALEQQSRXXXXXXXXXXXXQLGVFKVDEVVFPGMTKRFRIFEPRYRALVKQCLAEDEPLAILPLSRGGNTVATTARVSGLHNVEADGRCEVEITGIARCSVKTMWMKGESFGLFEAVVELFGDEQAKAEEEAEVNTRTASERPRDATPDA--AGDTSGQKEATGGNEGXRXXEGXXXXXXXGE----GLMAELPELERLRIEVSAIMQKELYRTRTRGRSPLWPGWDGSVSHGDAQAALTVASPPLPTPPTIKTADDSF--------EAAASSGSGDCSINAVGXXXXXXXXXXXXXXXXXGVGDKSS---IGGLDPCDLNAEALSYWAAHNVEAGALMKHEWLSSTSTSARLRGVRDLCRFALARHRDRSAVDGGVLSRPLSALRDLTSR 723
[Close]
BLAST of mRNA_P-fluviatile_contig8.14428.1 vs. uniprot
Match: A0A6H5JQN4_9PHAE (Lon N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN4_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 3.370e-127
Identity = 246/407 (60.44%), Postives = 272/407 (66.83%), Query Frame = 3 
Query: 1068 TLERVQETLRMAVRQAERERRWKEQQRQ---QLGVFKVDEVVFPGMTRRFRIFEPRYRALVKQCLADDVPLVMLPLSRGGNTVATAARVTGLFNVEEDGRCEVEITGIARCKVKTMWMKGESFGLFEAEVELFADE--------DYNQGAVAAEGREGVEKDEEGISRARHAAGASGRAAMSGXXXXXXXXXXXXXXXXXXXAEEVGLAANLPELERLRIEVSAIMQKELHRTRTQGRSPLWPGWDGSVSRNDALAAFAAT-PPLPTPLLIKTAGDD-------------NGDGEGGGEESQGGQGSGGTTAAEPKTGIDSRGGGGGIGGMDPCDLDAEALSFWAAQNVEAGALVKHEWLSSTSTAERLRGVRDLCRFALARHRDRSGVDGAILSRPLSALRDLTFR 2213
            TLERVQE +R   +Q+ +             QLGVFKVDEVVFPGMT+RFRIFEPRYRALVKQCLA+D PL +LPLSRGGNTVAT ARV+GL+NVE DGRCEVE+TGIARC VKTMWMKGESFGLFEAEVELF DE        + N G    + R+    D  G +  +   G + +    G                    +   L A LPELERLRIEVSAIMQKEL+RTRT+GRSPLWP WDGSVS  DA AA   T PPLPTPL IKTA D              N   +GGG E     G+GG    E   G  S      IGG+DPCDLDAEALS+WAA NVEAGAL+KHEWLSSTSTA RLRGVRDLCRFALARHRDRS VDG +LSRPLSALRDLT R
Sbjct:    3 TLERVQEQVRALEQQSRQXXXXXXXXXXXXXQLGVFKVDEVVFPGMTKRFRIFEPRYRALVKQCLAEDEPLAILPLSRGGNTVATTARVSGLYNVEADGRCEVEMTGIARCSVKTMWMKGESFGLFEAEVELFGDEQAKAEEETEVNTGTAPEQPRDAT-VDAAGETFGQEETGGTDQVGRKGKGAGGDR------------GDGERLMAELPELERLRIEVSAIMQKELYRTRTRGRSPLWPSWDGSVSHGDAQAALTVTSPPLPTPLTIKTADDSVEAAASSSSGDCSNSAVDGGGGEYDTVDGNGG---GEIGVGDKSS-----IGGLDPCDLDAEALSYWAAHNVEAGALMKHEWLSSTSTAARLRGVRDLCRFALARHRDRSTVDGGVLSRPLSALRDLTSR 388
[Close]
BLAST of mRNA_P-fluviatile_contig8.14428.1 vs. uniprot
Match: A0A4D9CXP4_9STRA (Lon N-terminal domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXP4_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 3.520e-8
Identity = 85/326 (26.07%), Postives = 136/326 (41.72%), Query Frame = 3 
Query:  594 EALPVYAEGGSFPNI-------AGKDSV--SRIFGMPREKPPLFFLLSQDDQSQDLQETNRRLENLLPMSGRLCA-----LSSGDPSSVVSTFPVGDAEAPVRG-----------------VCLMGD--ISLQEQARLARKTLGAFGFSAIIVSGDVCNELFVPAHPSAAESGSLSSAFSSEAAAATKAGGTLERVQETLRMAVRQAERERRWKEQQRQQLGVFKVDEVVFPGMTRRFRIFEPRYRALVKQCLADDVPLVMLPLSRGGNTVATAARVTGLFNVEED-GRCEVEITGIARCKVKTMWMKGESFGLFEAEVELFADED 1469
            E +       SFP +       AG D    S +  M  ++ P   LL  +  +  L E + RLE +   S  L A     L +  P  +++   +G AEAP  G                 + + GD  +S ++  RLA   LG+       +   +  +LFVP H                         TL R   T R         R   + Q + L +F++  V+FPG +   ++FEPRYR +VKQCL  + P  ++      ++V T A +T ++ +EE+ G   + ++G  R +V++  +  +SFGL  A    F DED
Sbjct:  167 EVVLFQCHDASFPQLRRKGVQDAGSDGADASALQDMVLQRQPGLLLLIAEP-NFPLAELSSRLECIFDKSHVLAAYARAVLPALRPPRILA---LGGAEAPAPGPEGGAKGGGATVPRALGLAVFGDQTLSAEDAGRLACCLLGSSWLGNFSLDQALTRQLFVPRH------------------------WTLGRQPPTHRY--------RSVSDTQARDLPLFRLQSVLFPGCSLILKVFEPRYRRMVKQCLERNEPFGLV---HAQDSVGTLASITEVYRLEEETGVSILRVSGTRRFQVESSSLAEDSFGLLTATRARFFDED 453
[Close]
BLAST of mRNA_P-fluviatile_contig8.14428.1 vs. uniprot
Match: A0A1M3KX39_9BACT (Lon N-terminal domain-containing protein n=1 Tax='Candidatus Kapabacteria' thiocyanatum TaxID=1895771 RepID=A0A1M3KX39_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 3.070e-6
Identity = 37/106 (34.91%), Postives = 57/106 (53.77%), Query Frame = 3 
Query: 1155 LGVFKVDEVVFPGMTRRFRIFEPRYRALVKQCLADDVPLVMLPLSRGG-NTVATAARVTGLFNVEEDGRCEVEITGIARCKVKTMWMKGESFGLFEAEVELFADED 1469
            LG+F ++ V+FP       IFEPRYRAL+ +C+ +     +  + +G    +  AARVT L    EDGR +V + G+ R ++  + +K +       EVE   DED
Sbjct:    3 LGLFPLNLVLFPQSQVPLHIFEPRYRALISECMTEGKVFGVNLVEQGHLYPIGCAARVTSLTQQYEDGRMDVMVEGVQRFRL--LGVKEDDAPYVVGEVEFLDDED 106
[Close]
BLAST of mRNA_P-fluviatile_contig8.14428.1 vs. uniprot
Match: A0A2V9D5W3_9BACT (ATP-dependent protease La domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9D5W3_9BACT)

HSP 1 Score: 59.7 bits (143), Expect = 4.090e-6
Identity = 39/113 (34.51%), Postives = 59/113 (52.21%), Query Frame = 3 
Query: 1155 LGVFKVDEVVFPGMTRRFRIFEPRYRALVKQCLADDVPL-VMLPLSRGGNTVATAARVTGLFNVEEDGRCEVEITGIARCKVKTMWMKGESFGLFEAEVELFADEDYNQGAVA 1490
            + +F ++ V+ PGMT    IFEPRY+A++K  + D+VP  V+L    G  TV   A V  +     DGR +V   G +  +++ +    E     EA V+L  D D+  GA A
Sbjct:    6 IPLFPLNVVLLPGMTLPLHIFEPRYKAMMKTVIEDEVPFGVVLSRENGIATVGCTALVRRVARTYPDGRMDVITVGQSAYRIRAVHKDKE---YLEATVDLMTD-DFQPGAAA 114
[Close]
BLAST of mRNA_P-fluviatile_contig8.14428.1 vs. uniprot
Match: A0A7V2B193_RHOMR (ATP-dependent protease n=2 Tax=Bacteria TaxID=2 RepID=A0A7V2B193_RHOMR)

HSP 1 Score: 58.5 bits (140), Expect = 1.040e-5
Identity = 30/88 (34.09%), Postives = 50/88 (56.82%), Query Frame = 3 
Query: 1149 QQLGVFKVDEVVFPGMTRRFRIFEPRYRALVKQCLADDVPLVMLPLSRGGNT-VATAARVTGLFNVEEDGRCEVEITGIARCKVKTMW 1409
            ++L +F +  V++PG      IFEPRYR L++ CLA DVP  ++    G    V + AR+T +     DGR ++ +TG  R ++  ++
Sbjct:    4 ERLPLFPLGVVLYPGERLPLHIFEPRYRDLIRDCLAQDVPFGIVLAEEGRLARVGSTARITRILARYADGRMDILVTGEERFRIVQLY 91
[Close]
BLAST of mRNA_P-fluviatile_contig8.14428.1 vs. uniprot
Match: A0A651ER03_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A651ER03_9FLAO)

HSP 1 Score: 56.6 bits (135), Expect = 3.800e-5
Identity = 26/79 (32.91%), Postives = 42/79 (53.16%), Query Frame = 3 
Query: 1152 QLGVFKVDEVVFPGMTRRFRIFEPRYRALVKQCLADDVPLVMLPLSRGGNTV--ATAARVTGLFNVEEDGRCEVEITGI 1382
            QL +F +D  + PG   +  IFEPRY+ L++ CLA  V L  +P     NT    +  R+   +N  + G C+++I  +
Sbjct:    2 QLPLFPLDVFLLPGERTKLHIFEPRYKQLIRDCLAQPVALFGIPFFSVVNTANYCSIVRIVNAYNYNDLGECDIDIVAV 80
[Close]
BLAST of mRNA_P-fluviatile_contig8.14428.1 vs. uniprot
Match: UPI001C32F19B (LON peptidase substrate-binding domain-containing protein n=1 Tax=Nocardioidaceae bacterium TaxID=1871072 RepID=UPI001C32F19B)

HSP 1 Score: 57.0 bits (136), Expect = 4.310e-5
Identity = 44/120 (36.67%), Postives = 63/120 (52.50%), Query Frame = 3 
Query: 1149 QQLGVFKVDEVVFPGMTRRFRIFEPRYRALVKQCLADDVP---LVMLPLSRGGNTV----ATAARVTGLF------NVEEDGRCEVEITGIARCKVKTMWMKGESFGLFEAEVELFADED 1469
            QQL +F ++ VVFPGM     +FE RYRALV+  LA+D+P   L+     R G  V    A A   TG+           DG  E+E+  +AR +++ + M G + G    EVEL  D++
Sbjct:    3 QQLPMFPLNTVVFPGMRVPLNVFEKRYRALVRHLLAEDMPRNRLLGTVAIRAGYEVGEHGAQAVHTTGVLLQMTECTPHSDGGFEIEV--LARQRMQLLQM-GTTDGFPSGEVELLEDDE 119
[Close]
BLAST of mRNA_P-fluviatile_contig8.14428.1 vs. uniprot
Match: A0A6A7LRT5_9CHLR (Lon N-terminal domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6A7LRT5_9CHLR)

HSP 1 Score: 55.8 bits (133), Expect = 9.710e-5
Identity = 36/114 (31.58%), Postives = 59/114 (51.75%), Query Frame = 3 
Query: 1149 QQLGVFKVDEVVFPGMTRRFRIFEPRYRALVKQCLADDVPLVMLPLSRGGNT--------VATAARVTGLFNVEEDGRCEVEITGIARCKVKTMWMKGESFGLFEAEVELFADE 1466
            ++L +F ++ V+FPGM  R  IFE RYR ++  C  +D P  ++ +  G           V T A++ G+  ++ DGR  +   G  R +V+T   +  S+ +   EVE F DE
Sbjct:    3 EELPLFPLNTVLFPGMPLRLHIFELRYREMIGACADEDRPFGVVLIKEGMEVGAPADPFEVGTMAKIVGIDRLD-DGRMNIVTMGTRRFRVRTYSTEKRSYVV--GEVEPFDDE 113
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14428.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G2L9_ECTSI8.780e-25462.86Peptidase S16 lon domain protein n=1 Tax=Ectocarpu... [more]
A0A6H5JQN4_9PHAE3.370e-12760.44Lon N-terminal domain-containing protein n=1 Tax=E... [more]
A0A4D9CXP4_9STRA3.520e-826.07Lon N-terminal domain-containing protein n=1 Tax=N... [more]
A0A1M3KX39_9BACT3.070e-634.91Lon N-terminal domain-containing protein n=1 Tax='... [more]
A0A2V9D5W3_9BACT4.090e-634.51ATP-dependent protease La domain-containing protei... [more]
A0A7V2B193_RHOMR1.040e-534.09ATP-dependent protease n=2 Tax=Bacteria TaxID=2 Re... [more]
A0A651ER03_9FLAO3.800e-532.91Uncharacterized protein n=1 Tax=Flavobacteriales b... [more]
UPI001C32F19B4.310e-536.67LON peptidase substrate-binding domain-containing ... [more]
A0A6A7LRT5_9CHLR9.710e-531.58Lon N-terminal domain-containing protein n=1 Tax=C... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:1307119..1317533 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score61.2
Seed ortholog evalue2.2e-06
Seed eggNOG ortholog1267533.KB906733_gene3306
Preferred namelonD
KEGG koko:K01338,ko:K07157
KEGG Pathwayko04112,map04112
EggNOG free text desc.ATP-dependent protease La (LON) substrate-binding domain
EggNOG OGs2JMUX@204432,3Y7JR@57723,COG2802@1,COG2802@2
EC3.4.21.53
COG Functional cat.S
Best tax levelAcidobacteriia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Hectar predicted targeting categorymitochondrion
Exons10
Model size3772
Cds size2166
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14428.1prot_P-fluviatile_contig8.14428.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 1307169..1315977 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817232.2155993-UTR-P-fluviatile_contig8:1307118..13071681622817232.2155993-UTR-P-fluviatile_contig8:1307118..1307168Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1307119..1307168 +
1693571593.5779035-UTR-P-fluviatile_contig8:1307118..13071681693571593.5779035-UTR-P-fluviatile_contig8:1307118..1307168Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1307119..1307168 +
1622817232.334348-UTR-P-fluviatile_contig8:1315977..13175331622817232.334348-UTR-P-fluviatile_contig8:1315977..1317533Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1315978..1317533 +
1693571595.5344472-UTR-P-fluviatile_contig8:1315977..13175331693571595.5344472-UTR-P-fluviatile_contig8:1315977..1317533Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1315978..1317533 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817232.2260747-CDS-P-fluviatile_contig8:1307168..13072761622817232.2260747-CDS-P-fluviatile_contig8:1307168..1307276Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1307169..1307276 +
1693571593.5997999-CDS-P-fluviatile_contig8:1307168..13072761693571593.5997999-CDS-P-fluviatile_contig8:1307168..1307276Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1307169..1307276 +
1622817232.235865-CDS-P-fluviatile_contig8:1308367..13085011622817232.235865-CDS-P-fluviatile_contig8:1308367..1308501Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1308368..1308501 +
1693571593.6111622-CDS-P-fluviatile_contig8:1308367..13085011693571593.6111622-CDS-P-fluviatile_contig8:1308367..1308501Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1308368..1308501 +
1622817232.2474656-CDS-P-fluviatile_contig8:1308703..13089131622817232.2474656-CDS-P-fluviatile_contig8:1308703..1308913Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1308704..1308913 +
1693571593.6217098-CDS-P-fluviatile_contig8:1308703..13089131693571593.6217098-CDS-P-fluviatile_contig8:1308703..1308913Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1308704..1308913 +
1622817232.2593157-CDS-P-fluviatile_contig8:1309429..13097081622817232.2593157-CDS-P-fluviatile_contig8:1309429..1309708Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1309430..1309708 +
1693571595.4348102-CDS-P-fluviatile_contig8:1309429..13097081693571595.4348102-CDS-P-fluviatile_contig8:1309429..1309708Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1309430..1309708 +
1622817232.2694108-CDS-P-fluviatile_contig8:1310498..13105921622817232.2694108-CDS-P-fluviatile_contig8:1310498..1310592Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1310499..1310592 +
1693571595.459533-CDS-P-fluviatile_contig8:1310498..13105921693571595.459533-CDS-P-fluviatile_contig8:1310498..1310592Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1310499..1310592 +
1622817232.2792563-CDS-P-fluviatile_contig8:1311115..13114091622817232.2792563-CDS-P-fluviatile_contig8:1311115..1311409Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1311116..1311409 +
1693571595.4734316-CDS-P-fluviatile_contig8:1311115..13114091693571595.4734316-CDS-P-fluviatile_contig8:1311115..1311409Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1311116..1311409 +
1622817232.2888763-CDS-P-fluviatile_contig8:1312229..13124171622817232.2888763-CDS-P-fluviatile_contig8:1312229..1312417Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1312230..1312417 +
1693571595.4910753-CDS-P-fluviatile_contig8:1312229..13124171693571595.4910753-CDS-P-fluviatile_contig8:1312229..1312417Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1312230..1312417 +
1622817232.2988644-CDS-P-fluviatile_contig8:1312793..13130051622817232.2988644-CDS-P-fluviatile_contig8:1312793..1313005Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1312794..1313005 +
1693571595.5048356-CDS-P-fluviatile_contig8:1312793..13130051693571595.5048356-CDS-P-fluviatile_contig8:1312793..1313005Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1312794..1313005 +
1622817232.3109298-CDS-P-fluviatile_contig8:1314657..13147851622817232.3109298-CDS-P-fluviatile_contig8:1314657..1314785Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1314658..1314785 +
1693571595.5159492-CDS-P-fluviatile_contig8:1314657..13147851693571595.5159492-CDS-P-fluviatile_contig8:1314657..1314785Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1314658..1314785 +
1622817232.323497-CDS-P-fluviatile_contig8:1315458..13159771622817232.323497-CDS-P-fluviatile_contig8:1315458..1315977Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1315459..1315977 +
1693571595.5250416-CDS-P-fluviatile_contig8:1315458..13159771693571595.5250416-CDS-P-fluviatile_contig8:1315458..1315977Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1315459..1315977 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14428.1

>prot_P-fluviatile_contig8.14428.1 ID=prot_P-fluviatile_contig8.14428.1|Name=mRNA_P-fluviatile_contig8.14428.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=722bp
MLRRVMRVSRRLDAVWRLRSQRITVQAAVNAHDSAKAAVADCLERVLGSG
ANTPATTFAVLFFEGHDQAGVQDALNSFAQRRPQAPPVIGCSLGENAYER
QTRRLRQDQSARRLALISAPSTGKPGQKLLPWSPPSPSETDWSQELPDPF
RSPKIVTVLGLGFEKEDAKGGDKVGGDGGRIEALPVYAEGGSFPNIAGKD
SVSRIFGMPREKPPLFFLLSQDDQSQDLQETNRRLENLLPMSGRLCALSS
GDPSSVVSTFPVGDAEAPVRGVCLMGDISLQEQARLARKTLGAFGFSAII
VSGDVCNELFVPAHPSAAESGSLSSAFSSEAAAATKAGGTLERVQETLRM
AVRQAERERRWKEQQRQQLGVFKVDEVVFPGMTRRFRIFEPRYRALVKQC
LADDVPLVMLPLSRGGNTVATAARVTGLFNVEEDGRCEVEITGIARCKVK
TMWMKGESFGLFEAEVELFADEDYNQGAVAAEGREGVEKDEEGISRARHA
AGASGRAAMSGDGAGKREGAGAGTGARDGIAEEVGLAANLPELERLRIEV
SAIMQKELHRTRTQGRSPLWPGWDGSVSRNDALAAFAATPPLPTPLLIKT
AGDDNGDGEGGGEESQGGQGSGGTTAAEPKTGIDSRGGGGGIGGMDPCDL
DAEALSFWAAQNVEAGALVKHEWLSSTSTAERLRGVRDLCRFALARHRDR
SGVDGAILSRPLSALRDLTFR*
back to top

mRNA from alignment at P-fluviatile_contig8:1307119..1317533+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14428.1 ID=mRNA_P-fluviatile_contig8.14428.1|Name=mRNA_P-fluviatile_contig8.14428.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10415bp|location=Sequence derived from alignment at P-fluviatile_contig8:1307119..1317533+ (Porterinema fluviatile SAG_2381)
GTTGCCTGTTTCCGGCACCTGTAGAGACAGCTAGACGAATCCCCTGCGCC
ATGTTGAGACGAGTAATGAGGGTCTCGCGGAGATTGGACGCGGTCTGGCG
TCTGAGGTCCCAACGAATTACAGTGCAAGCCGCTGTTAACGCCCACGACA
GTGCAAAGGTGAGCATACAGTAGTGCGAAGTGCTGCCTCTTCCCGAAAGA
AATCACGCCCTACTACTCCCTCGATGATTCAACCTTCCCGGTGCAAAGTT
ACGCAGCGGTTAAGACCAATCACACAGACCCGGATTCATTTTATGGTATC
GCCGTAGCCCTTGCTTGAGAGCTTCTCGTCTTCAATCTGACGACTGCACG
GGCGCATGACTCCTGATGTCAGCTCTCTCGTGGAGTCAGCGCAGCTGCGA
GAACGGCAACGTGCTTGTTCATGTGAACCCACCGTTGCCCCCGTTTCCTA
TCAGGGCGGCTCGCGAGTGTTTTTATCAGCAAAAAAATTCTGTCGAAAGG
CTCCAAATGCTCTGCTTTATGCACTTTCCTGTCTGATAGACACCAACGAA
GAGGCCTTGTCCTCGTTTTTGAAGAGGAGAGGGTGAGGGGGATTGCATGC
AATTTCCCCTCTCCAGCGGCTGCTGGATGCTTCGTGGGGGATCATGGCCG
CCCTGGAAAACGTCCTGGCCGGCGAAGATCACGTGGAATACCCTGAAATA
CTTCAGGACTGATCCATTCTTTCATACCCCCTGCGGCGGAAACGTTTCCC
CCAACTCAACACGATTGGTGTAGCCCATTCCCGGGTTCGTGCGTGGTGCC
GCGAGACTGCCAGCCCATTGGCCCGTCCCGTCATGCGTTAGCAATGCTCG
TTTGGTGATTCCACGCTGGGTACCGCGCATATGCAGGCTTATTCCCCTCA
ACCGCCATAAAAGTATCGCTGTCTAGAGAGCCCGACAACGCCATATTCCT
TTATTTTTTTGTGGGTTCCATGCAAGGAAGGGTGTGTGCAGTACAAGGCC
CTCAGGAGAGCGTGGCACGTAGTTTTCTAGCCTTTTTTGATGCCGCCCCG
CACTCCCGCCTCTCGCATCGGATGAGTCGACATGCTGCTTACGATCATGT
CAGGTAGCGGAACTGCACACAGAGCTGTTCCTATCGCGCACCACGGCCAC
GGACTGTGCATGCTGCTGCTGcccCCCCCCCTCCCCCCCCGCCCCCTTAC
ACTTCTCTCTCTCGCCCTCACAATCTTCTTTGCTGTTCGGAAAACCCAGG
CGGCGGTTGCCGACTGCCTCGAGCGAGTCCTCGGCTCGGGCGCTAATACG
CCGGCGACCACGTTCGCGGTGTTGTTCTTCGAGGGGCACGACCAGGCTGG
GGTCCAGGATGCGCTCAACTCGTTCGCTCAGAGGTAGGTTTGGTGCTGGG
AACAGGTTTTTGCCCTTTCACCGCACATGTTACGATCAAACATGACATTA
TGTCGACCGCCGATCAAACCCAGCAATGGTATCGTCGTCGTCGCCGTCGC
GAACGCGGGCGTGCTCTGAACTCGAACGTTTCTGGAGAAGAAATCGCCGT
TTATTTCGCCTGACCCGCACGTGCGGTGTGCGTAGGCGCCCGCAAGCCCC
GCCCGTGATCGGGTGCAGCCTGGGAGAGAACGCCTACGAGCGGCAGACGA
GGCGGCTCAGGCAGGACCAGTCGGCCCGCCGTTTGGCGCTCATCTCGGCG
CCCTCCACGGGGAAGCCGGGCCAGAAGCTGCTGCCGTGGTCGCCGCCGTC
GCCGTCGGAGACGGACTGGTCGCAAGAGTTGCCTGACCCCTTCAGGTAAA
AGAGACCAAGAGAAAGACGAGAGTCGAACCAGCGTGTTCGGCTCCTGGTG
GTCGTTGTCGTCGTGGCTTTGCGCCGGGCGTTGGACGGAGGGGTGGCAAG
GGAAGGTTAACTTGGCTTGTTGTGGTTCGTTGTTGTTGTTGTTGTTGCTG
TTGTTCGTTGTGGTGGTGGTGGTATTGTTGTTGTCGTCGCCGTCGCGTTC
GTCGCTCTGTTTTTTCGATGCTGTTGCTGCTGTTGCTGCTGTTGGTGTTT
GTGTTATCGTAGTTGTTGATGTTTTTTCTTGTTTTTTTTGTGTCCTTGTT
GCTGCCGTCTTTGTGCCATTGTTTAAGTTATCGCTGCTGCCGCGGTTGTT
GTTGATGCCGTCATCATTGTCATCGTTTCCGTCCCTTTTGTTGCACCCCA
TCTTGCGCCTTCATTGCGATCAGATCATCAATACTTCGACGTATACCGTT
TGTGCCCTCGTAAAGGTCTCAATAATTTTCCCAATGTTTCGCGACAACCA
CGACACGCCAGATCGCCGAAGATAGTCACGGTACTCGGGCTAGGGTTCGA
GAAGGAGGACGCTAAGGGAGGGGACAAAGTCGGGGGAGACGGAGGACGCA
TCGAGGCCCTCCCTGTGTACGCCGAGGGGGGGAGCTTTCCCAACATCGCA
GGCAAGGATAGCGTCTCGAGGATCTTCGGCATGCCGAGGGAGAAGCCACC
TTTGTTCTTCCTGCTGAGCCAGGATGACCAGTCCCAAGACCTCCAGGAGA
CCAACCGGAGGCTGGAGAATTTGCTCCCGATGAGCGGCAGGTAGGCAGTG
AACCAGAGCAGACCAGACCATAGCAGTTCAGAGGAGACGAGACTAGACCA
GATCAGACCTGACTACAGCAGAGGAGGGCAAATCATATCGCATCAGACCA
CACCACGTCAGATCAGACCACCCCAGGCCAGGCTAGACAGAGAGTTAATC
AGCAACGAGGAGCGGCAGACAGGAGAGTCGAGGAGGAGCAGCGACTGACA
AATGCGAGGCGATCAGCAAGGAAGATTAAAAGCAGACAAAAAGGGGCAAA
GCATAAGCATGCATCGGGCAAAGGAACAGTAAGCAGCAAGCGGCAAAGCA
AACACAAGAAGCAACCGTCGAGCAAAAAACGAAGCGAAGGCAAGAAGGAC
GGCGGCAACCAGAGCCACACCGAGTCTGTGGCTTTGATAAAAATGAGAAT
CGCTCCGCTCCTCACCTGGATGGAGAACGAACCTCAGTACGGCCATTAAT
TTTAAAACAGGCAGACTGCGCTATATTGTGACCCGCCTCGGTCGGTCCGG
GGGAGTGTCCCTGCGTCCTCGGCATCGTGCGTGCCTTCGTCGAGGTTTGA
GTGCGCTTTGGCACGTGCCTTCCGACGGCAGCCGTGCCTGTCATTTGTTG
TGTCCGTCTCTTCGTCGCTCGTTGCATCCGACGGTCCGTTCCACGCTCGT
ACCCCGATTCTCTCTCTCTATATATATATATCCTTCCGGCGCTTTTCCCC
TTCGCTTCCACGTGGCCTCTGAACCCCTCGTTCTCCCCGCCCCGCTTTTT
TTTTCTCGCCGCGGCCTGATTGTTGTTCAGGTTGTGCGCGCTGAGCTCCG
GCGACCCTTCCTCAGTGGTGTCCACTTTCCCCGTCGGAGACGCGGAGGCA
CCCGTCCGCGGTGTATGCCTCATGGTGAGAAGGAATGCCGTCAACGGCAT
TCGCGGAAAAAATCACCGAAATGCTTCCGGCCAGGCGTGGTGAACTGCGT
TGTCGGCACCTGCCTCAAATGCCTCGGGGATGACTACGAACGGAGACGAG
ACCGCGCCCGAAAGTAGATACCGCGCCGTTCATCCCCTGCAGTAATCTCG
GGAGACGCATGTTCCCTTTTGCCTACCATGCACCCGCAACGTGCCGGCCC
ACCCTTTCCTCTCTGTCCGTTTCTTCGCAGAATATTTTTGATCGCCACGG
AAAGAGCACTTATTGATCCACCCCCTCCCCTCTCCCCCTTACCCCAGGCC
CTCCCGGAAAGGTGGCAGTCGGCCGCAAGGCAATGTCATCCGGTGTGTGT
CGTTCGTGCCCTCGCTCGGTTTCATTCATTTCCCAGCGTCGCCTTCCTCA
CCCGACTCGTCTACGTGCCCCCTCGACCCCTAACTCTTCCTTGCCGCACA
CCCGACCCGATTTGATGTCCAAATACAAACCACATGACACACGGCAGGGT
GACATTTCTCTTCAGGAGCAGGCGAGGCTGGCGCGCAAGACCCTGGGCGC
TTTCGGCTTCAGTGCGATCATAGTCTCCGGCGACGTATGTAATGAGCTCT
TCGTGCCAGCGCACCCCTCCGCCGCTGAATCCGGATCGCTCTCCTCCGCG
TTTTCGTCCGAGGCGGCGGCGGCGACCAAGGCGGGGGGCACGCTCGAGCG
GGTGCAGGAGACCTTACGAATGGCGGTGCGCCAGGCGGAGCGGGAGCGGC
GGTGGAAGGAGCAACAGCGGCAGCAGCTCGGCGTGTTCAAGGTGGGGTGA
AACGGTGGAATCGCGACGGCGACGGTGTTGAGGAGGAGGTTTCGATCAAG
AGGGTACGTACTGTTCTCCCTCAGACACGAATTGTAGATCCTGTCAGCGC
GTCAAAGTCGGCTCGCCTCTTCACCTCCTGAAGAATCTGCTTCTCGAGAA
AGCATTGGCGCATACGAGCGGCCGGAGTCGGCGAGTTGGAATCTCGTTGT
TCCCGTACCTTTTTTCTTGTTTGTGAACGGAACGTACGTTCCCTTATCGC
TTTTGCTAAGGCGAGGATAGCGCTCGTTCGTTCCGACGCCGTTGAGCCAA
GGATTTGCCGAGCCCGTGATCTCGCATTGAGTACTGTGGACGAGGCTAGT
ACGCAGATTGCATCCATCAATATTTCCAGGTGCGACTCAGGATTAAACGT
GTTCACCAGAAGCTCGGCAATGGTGGTGAACAAGGGTGATGACTTTTCAA
AGCAAAAAAAAAATAATGATTTCCCCCATATGCCCTGGTCTCGCCCGCAC
ACTTTTGATCGTCCATAAAAATACACAAAAGTGTTAAAATCTGTATTTCC
ACAGATTTTTGCTTTGCAAGTCATCCCGTTTGTTGCCACCATTCCTCAGG
GGCAATCTGGTTCGCCACAGTTCCCAGGCGACCTCCTTTCCCCCCTCCGA
CTACACCTTTCCCTGCCCCCGTCGTCAAAGGACTCTGAGGCATGCAGTAG
CACGTGCCCCCCCCTCCCCATCCTTCTCCCCAATCCCTACCCCGCTCCCA
CCCCCACCCTCAACCCGCGCCCGCCCTCGGCTTGCCTTCCCCCCTCCTCG
CGAAAAAAAAGGTGGACGAGGTGGTGTTCCCGGGCATGACGAGACGGTTT
CGGATCTTCGAGCCGAGGTACCGCGCCCTTGTGAAGCAGTGTCTCGCGGA
CGACGTCCCCCTGGTGATGCTGCCGCTGTCCAGGGGCGGCAACACGGTGG
CGACCGCCGCGCGCGTGACCGGCTTGTTCAACGTCGAGGAGGACGGGAGG
TACGTAATGGTTACCTGTTCTTGCGTGTTACATGTTTTGTTTCATCGAAT
GACTTGCCCTCCTCTCGGTCTCTCCAGCCCCGCTTATTTCGTGTGCATGC
GTAAAAAAGTGGGATGGGCATATAGTCGATACGAAGCACGGGTGGGAAGG
GGTGGGCGGGGTGGGCGGCGGGTGACGGGGAGGGGTGGGCATTGAAACTC
ACCACGATTGTGGCCGTATATGGCCGAGGGTGGGTGCGTTTTTTTCATAC
CTATCAAACGTCGCTGTTATTGGTGTTGGTGCTGGTTCTGGCGTCGGAGT
CTACTTACCCCTGCGCCCCATTTCGCTCGCTTTTCTTGGCCTTTATTTCC
GATGATTCGCATTCTTTCATTTCAGGTGCGAGGTAGAGATCACGGGGATC
GCCCGCTGCAAAGTCAAGACAATGTGGATGAAGGGGGAGAGCTTCGGGCT
GTTCGAGGCCGAGGTCGAGCTCTTCGCGGATGAAGACTACAACCAGGGGG
CGGTGGCGGCGGAAGGAAGGGAGGGGGTTGAGAAGGACGAGGAGGGGATC
AGCCGTGCGCGACATGCTGCGGGAGCAAGTGGACGAGGTTGGTTGTGCTG
ACTTGAGTTGCTCGCTTTCCGCTTGTTTTTTTTTTGCCGTCAAGGTCAAA
TATGTGGTCGGTGGGAGACGCCTATACAcCCCCCACACCCGGTGTTTTTG
TTGTGGTTCCGGCTGTATTTGCGTGCGTGCCGCCGTTGGTGATTGACACG
ACGGCGCGCGAGTCGTGAGTCCAGCCAGAACTGCGCAATTAAACGGCCGA
TCGCCAAGCGGTCAAGACGTCTTTTTTAAGCGTATAGCGCCCGACgttGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTGTCGGT
GTTTGTTCTCTGAAGGTCTATTTCCAGACGTCTTGGGCCCTTTCACGAAC
CCGGGCGTAAGTTAACCGAAGGGAAATTATGTAAATTCCCGCCCAGCACT
TCCGTCAATATGACGCTCCCCATCGCCCAGAGAAAAGTGTGCGCGCGAAA
CCCTCGAACAAGCATGCTCTTGACGCCTTTGGGTATTATGCGGGTGCCGG
GGATTCAAAGAATTTCGTCGCGCAGCTGAAGTAGACAAAAGCTACAGCAG
CAGGAGCAACGCAGCAGCAGCACCAGCACCAGCACCAGCACCAGCACCAG
CAGCAGCACCAGCAGCACCAGCAGCACCAGCATTTCCTCTACTCCCTTTG
TTGTCAGACGCCGGCCCCAAATATTTCGTTGAAGTCTTCACGCCTGCCTA
CCCCGTTCATGCTAGTAGTCACGCACGCCGTCATGTATGATGTATGATGA
CAATTTTCTCCCCCGCCATCGCTACCAACGGTTCGACGAAGATGACATCT
GTAGCGTTGTACGTGCGTTATTACCCCCCCCTCCCTTGAAGGATGCTGCC
CACCCTTCATGCGACTCGCCGAATGCATCGCGGCACTTCACGCTTGGTGA
ATGCAAGGGCCTGGGCCGGTGGAAATCCTTCAAATCGCGAGGCCTATGGC
CAAACCGCTACGGCGCGAATTGAGTACCCCCCCCGTCCCCGCGCGCCCTC
CCGCTGGCTCTCACCTCGGTGTTTGCCATCGGGATTGGGTTTTCGTCGCT
TGGCAACGACGTTGTAAAACAAGCCAATTCACTTCGTGAACTCGGCAACC
AGGTTACCGTCTTTTTTGTTCCTCTGTTTTTTTTGGCGGTAACCATAATG
GTGGTCGAGAAGATCATGTTGTGCGGGGTGGAGAACCCTCACTCCGCGCA
AGGGGGATGATCGCACCACGTTGTGTTGAAATGGTCAAGCACCCTCGAGG
CAGTTTCACAGTGCTTACAACTGTCTCTGGAAGTGAAAGCACCAGACAAT
AAATTAAGCCATACGCAGCTGTCATCCGTATGCGAGGAAGTAAGCACAAG
ATGCCGAACACCCTTGGCAGGATGCAGCGCACCCTTCATGCGACTCGCCG
AATACCTCACGGCGCTTGGCGCTTGGTGGTGTGAGAGCCTGGTCCGGTGA
GAACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCTAGGTCAATGGTC
TAACGACTACGGCATGCACGACTATGAGTACGCCCCCCCCCGCGCCCACC
GCATCGTCCGGCCGACATTTTTGTTCGTGTAACACCGAACAAAACCTCTG
CGTCGTCGATTTTTTCGTGGTTCGTGTGGCACGTAGCAGCCGCGATGAGC
GGGGATGGCGCTGGGAAGAGAGAAGGAGCAGGAGCAGGAACAGGAGCCAG
AGATGGCATCGCCGAAGAGGTTGGGCTGGCGGCAAACCTCCCGGAGTTGG
AGCGGTTGCGAATCGAGGTCCGTCTGCCTGTCTGTCTCTGTGTCTCTAAG
TTTCTCTCGCTCGCGATTGGTCACGGCCGCTTCGGTCTGCCTGCCTCGCT
GCCCACACTCGTGTCACTGTTTTTGACTCCTTGTTAGTCCGTCGTCCCCG
TCGTGTATGCCATAACTTGCAAATTTGGTGCCATGCTGTACTCTGAGCGG
GCGGTGTCAACCCTCAAGGCTTCCAAGTGTTTCTGATGTCGGCTTCTCCG
TCGGCGTCACGACGACGATCACGGCGTCAACGGCGGCGCGACGGCGCGTG
GGTGTAAGCAGTCGGAGTGCGCAGTCAATCTCGTACCGCTGCCGGGCTCA
GCAGTCGATAGGGGCAGCAGCAACAAGAAGCGTCCACGGCACAGGACCAC
GGCGTGATTTGATCATACGGTAACGTGTGTTCGACGCAGGCTTTCCTGTT
TGGATGGGAAAGGGGAGTGTTGATGGGGATGGGCAGTCGTTACTCCGAAG
CACGATGGCCTGCTCCCCGTACAACATTTTTTTATTTCATTTAAACTCAT
TCGATTTTTCGGCGCTCGCCGTTTCCTTCCCACTCCCCGATGCTTGTGCG
ACGCGTTCGGTTTCTCCCTCCCCTGTCGCCCCCCCCGCCCTATTCCCCCT
CTTCTTCCGCACGTCCCTGCTGGACTGCGCGGCGCGGCAGGTGTCCGCCA
TCATGCAGAAGGAGCTGCACCGCACCCGCACCCAAGGCAGGTCCCCGCTG
TGGCCGGGCTGGGACGGCTCGGTCTCCCGGAACGATGCCTTAGCTGCCTT
CGCCGCGACGCCGCCGCTGCCCACCCCGCTTTTGATCAAGACGGCTGGCG
ATGACAACGGCGATGGCGAAGGCGGCGGCGAAGAGAGCCAGGGCGGCCAA
GGGAGCGGAGGAACGACAGCAGCGGAGCCCAAAACCGGCATCGACAGCAG
GGGCGGCGGCGGCGGCATCGGCGGCATGGACCCGTGCGACCTTGACGCGG
AGGCTCTGAGCTTCTGGGCCGCGCAGAACGTGGAGGCCGGCGCCCTGGTG
AAGCACGAGTGGCTTTCGTCCACGTCGACGGCGGAGCGACTGAGGGGGGT
GCGGGACCTGTGCAGGTTCGCTCTGGCGAGACACCGCGACCGGAGCGGGG
TGGACGGGGCCATCCTGTCTCGGCCACTTTCGGCGCTGCGCGACCTCACG
TTTAGGTAGCTTTTTCTCTTTTTTGTTGTTGAGAGAGGGCAGACGGCAAG
AGAATGGGCTGGACCGGAGGTGGTGGTGTTAAGGATGATGTTTTCGGTGG
TTCTGGTGACCTGACGACCACGACGATGGTATTCATGGTGACGGTGGTGA
TGGTCACGACTCCGGTCTCATTTCGTCTTTATTCCTTCTTGTGTTGTCTT
CGCGGCCCCCAAGATAAATTCATTGAAGTGTCCTTGCTACCCCCCCCCTT
CCCAAGTCGACGCTGATTAGGCGCAGCCGACGGCAACTGCAAGAGGAGGG
CGTGTTTCTGCTGAAATGCCAGACGGACCGGTCCACGCGTTGTCGACCCA
ATTTGTGGCATTGTCCGGTCTTGCTTGGCTCGCCTAGCTGTTGCGAGAGC
GCCGTTGTGCTGTTTATGATTCGAGCCACAGCGAGAGAAGGGGGGGTTAC
TCGACTGCGTTGATTTTTCTCGTCGCACCCATGTTTTCACTGAGTGTTTT
TTCTTCCCCATCAGTCTTGTCCTTTTATGTGTATGATGGTGACGGGCGTG
ACGGGGTTCGGGTGGTTGTGCGGTTGGTGGGAGTGGATTTCTCGTTTTAA
GCGTGCTTTGGTCATTTGACCACCTTTCACTCATGTTTTCCTGGGAGACG
GAGATGCGCAAGGGGGAGTATTGGATGTGGAATGGAGTCGTCCAGTCGAA
TCTGTCGGGTCTCTTTCGGGGCACAGTTCTTTTTCACGCATGGGTGTACA
GGCATTTGGCTTCGTCGGCCTCCCGTCTCCCGCACACGTTCGTTCTGACT
GACCCGCAGTCTTGTTTCCCCTGGAAATGTTGTGCCAGTGGAACACTCTC
CGCTGTGTCCCGTATGAATTGCTTGCCTTTGTTTGTCGTTTGTTTGCCGA
AAAGGCATCGATAACATCGGGCAAGGTTCATTATTTCTATTTGACGTCAA
GCAAAAACGGCGATAGATTTGTGTGCTGCCAGGTAAAGACCCAGGTTGTG
GGGTGCGGCCGGCGACTATCGCACAGCGGCGGGTGCTACGTCCGGGGTAT
TCTTCTAGATTCTAGAAGTGCCTCACCTGGCTTGTTGAGAAAGGGGTTGT
CTACGACTTTTTTCTTTTGCGCGTGCAGGGCCTCCCCCGCTAGTTAGTGT
GGGCACGTGGTAACAGGTGTCGCGGCCTAAGGCCAAGACAGGTCGGAGGT
AGGGTAGCGCGAGCGGGAGTATAGCGCAGTACTCAAGGGCCGCCAACGCC
GAGGCAAAGATCATCGATCGGCCTGAAGAGCATGATCTTACGGCGCCGTC
TACCCCTGGGTCGATTTTCCAAAGCGAGGGCCGCGGGGAAATGGGTGGCA
TGCCGGCAAACTTCAAGCATGTGAGGAAGGAGGAAGGATTGAGTAACAAC
AACCGGAACTAACTTTTGCTGGAGGGATGAATATTGGAGAAGTCGAGCGG
TGCGATTGTCGCCGCTTGGTTTGGTTGAAGTTTGGAGGTTTTCGCTGACG
CGCGTTCTGTACATAAAACAATTCTGTGACACTGCTGGTAATTCAATAAT
CGCTGCAACCACGTT
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig8:1307119..1317533+

>mRNA_P-fluviatile_contig8.14428.1 ID=mRNA_P-fluviatile_contig8.14428.1|Name=mRNA_P-fluviatile_contig8.14428.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4332bp|location=Sequence derived from alignment at P-fluviatile_contig8:1307119..1317533+ (Porterinema fluviatile SAG_2381)
ATGTTGAGACGAGTAATGAGGGTCTCGCGGAGATTGGACGCGGTCTGGCG
TCTGAGGTCCCAACGAATTACAGTGCAAGCCGCTGTTAACGCCCACGACA
GTGCAAAGATGTTGAGACGAGTAATGAGGGTCTCGCGGAGATTGGACGCG
GTCTGGCGTCTGAGGTCCCAACGAATTACAGTGCAAGCCGCTGTTAACGC
CCACGACAGTGCAAAGGCGGCGGTTGCCGACTGCCTCGAGCGAGTCCTCG
GCTCGGGCGCTAATACGCCGGCGACCACGTTCGCGGTGTTGTTCTTCGAG
GGGCACGACCAGGCTGGGGTCCAGGATGCGCTCAACTCGTTCGCTCAGAG
GCGGCGGTTGCCGACTGCCTCGAGCGAGTCCTCGGCTCGGGCGCTAATAC
GCCGGCGACCACGTTCGCGGTGTTGTTCTTCGAGGGGCACGACCAGGCTG
GGGTCCAGGATGCGCTCAACTCGTTCGCTCAGAGGCGCCCGCAAGCCCCG
CCCGTGATCGGGTGCAGCCTGGGAGAGAACGCCTACGAGCGGCAGACGAG
GCGGCTCAGGCAGGACCAGTCGGCCCGCCGTTTGGCGCTCATCTCGGCGC
CCTCCACGGGGAAGCCGGGCCAGAAGCTGCTGCCGTGGTCGCCGCCGTCG
CCGTCGGAGACGGACTGGTCGCAAGAGTTGCCTGACCCCTTCAGGCGCCC
GCAAGCCCCGCCCGTGATCGGGTGCAGCCTGGGAGAGAACGCCTACGAGC
GGCAGACGAGGCGGCTCAGGCAGGACCAGTCGGCCCGCCGTTTGGCGCTC
ATCTCGGCGCCCTCCACGGGGAAGCCGGGCCAGAAGCTGCTGCCGTGGTC
GCCGCCGTCGCCGTCGGAGACGGACTGGTCGCAAGAGTTGCCTGACCCCT
TCAGATCGCCGAAGATAGTCACGGTACTCGGGCTAGGGTTCGAGAAGGAG
GACGCTAAGGGAGGGGACAAAGTCGGGGGAGACGGAGGACGCATCGAGGC
CCTCCCTGTGTACGCCGAGGGGGGGAGCTTTCCCAACATCGCAGGCAAGG
ATAGCGTCTCGAGGATCTTCGGCATGCCGAGGGAGAAGCCACCTTTGTTC
TTCCTGCTGAGCCAGGATGACCAGTCCCAAGACCTCCAGGAGACCAACCG
GAGGCTGGAGAATTTGCTCCCGATGAGCGGCAGATCGCCGAAGATAGTCA
CGGTACTCGGGCTAGGGTTCGAGAAGGAGGACGCTAAGGGAGGGGACAAA
GTCGGGGGAGACGGAGGACGCATCGAGGCCCTCCCTGTGTACGCCGAGGG
GGGGAGCTTTCCCAACATCGCAGGCAAGGATAGCGTCTCGAGGATCTTCG
GCATGCCGAGGGAGAAGCCACCTTTGTTCTTCCTGCTGAGCCAGGATGAC
CAGTCCCAAGACCTCCAGGAGACCAACCGGAGGCTGGAGAATTTGCTCCC
GATGAGCGGCAGGTTGTGCGCGCTGAGCTCCGGCGACCCTTCCTCAGTGG
TGTCCACTTTCCCCGTCGGAGACGCGGAGGCACCCGTCCGCGGTGTATGC
CTCATGGTTGTGCGCGCTGAGCTCCGGCGACCCTTCCTCAGTGGTGTCCA
CTTTCCCCGTCGGAGACGCGGAGGCACCCGTCCGCGGTGTATGCCTCATG
GGTGACATTTCTCTTCAGGAGCAGGCGAGGCTGGCGCGCAAGACCCTGGG
CGCTTTCGGCTTCAGTGCGATCATAGTCTCCGGCGACGTATGTAATGAGC
TCTTCGTGCCAGCGCACCCCTCCGCCGCTGAATCCGGATCGCTCTCCTCC
GCGTTTTCGTCCGAGGCGGCGGCGGCGACCAAGGCGGGGGGCACGCTCGA
GCGGGTGCAGGAGACCTTACGAATGGCGGTGCGCCAGGCGGAGCGGGAGC
GGCGGTGGAAGGAGCAACAGCGGCAGCAGCTCGGCGTGTTCAAGGGTGAC
ATTTCTCTTCAGGAGCAGGCGAGGCTGGCGCGCAAGACCCTGGGCGCTTT
CGGCTTCAGTGCGATCATAGTCTCCGGCGACGTATGTAATGAGCTCTTCG
TGCCAGCGCACCCCTCCGCCGCTGAATCCGGATCGCTCTCCTCCGCGTTT
TCGTCCGAGGCGGCGGCGGCGACCAAGGCGGGGGGCACGCTCGAGCGGGT
GCAGGAGACCTTACGAATGGCGGTGCGCCAGGCGGAGCGGGAGCGGCGGT
GGAAGGAGCAACAGCGGCAGCAGCTCGGCGTGTTCAAGGTGGACGAGGTG
GTGTTCCCGGGCATGACGAGACGGTTTCGGATCTTCGAGCCGAGGTACCG
CGCCCTTGTGAAGCAGTGTCTCGCGGACGACGTCCCCCTGGTGATGCTGC
CGCTGTCCAGGGGCGGCAACACGGTGGCGACCGCCGCGCGCGTGACCGGC
TTGTTCAACGTCGAGGAGGACGGGAGGTGGACGAGGTGGTGTTCCCGGGC
ATGACGAGACGGTTTCGGATCTTCGAGCCGAGGTACCGCGCCCTTGTGAA
GCAGTGTCTCGCGGACGACGTCCCCCTGGTGATGCTGCCGCTGTCCAGGG
GCGGCAACACGGTGGCGACCGCCGCGCGCGTGACCGGCTTGTTCAACGTC
GAGGAGGACGGGAGGTGCGAGGTAGAGATCACGGGGATCGCCCGCTGCAA
AGTCAAGACAATGTGGATGAAGGGGGAGAGCTTCGGGCTGTTCGAGGCCG
AGGTCGAGCTCTTCGCGGATGAAGACTACAACCAGGGGGCGGTGGCGGCG
GAAGGAAGGGAGGGGGTTGAGAAGGACGAGGAGGGGATCAGCCGTGCGCG
ACATGCTGCGGGAGCAAGTGGACGAGGTGCGAGGTAGAGATCACGGGGAT
CGCCCGCTGCAAAGTCAAGACAATGTGGATGAAGGGGGAGAGCTTCGGGC
TGTTCGAGGCCGAGGTCGAGCTCTTCGCGGATGAAGACTACAACCAGGGG
GCGGTGGCGGCGGAAGGAAGGGAGGGGGTTGAGAAGGACGAGGAGGGGAT
CAGCCGTGCGCGACATGCTGCGGGAGCAAGTGGACGAGCCGCGATGAGCG
GGGATGGCGCTGGGAAGAGAGAAGGAGCAGGAGCAGGAACAGGAGCCAGA
GATGGCATCGCCGAAGAGGTTGGGCTGGCGGCAAACCTCCCGGAGTTGGA
GCGGTTGCGAATCGAGCCGCGATGAGCGGGGATGGCGCTGGGAAGAGAGA
AGGAGCAGGAGCAGGAACAGGAGCCAGAGATGGCATCGCCGAAGAGGTTG
GGCTGGCGGCAAACCTCCCGGAGTTGGAGCGGTTGCGAATCGAGGTGTCC
GCCATCATGCAGAAGGAGCTGCACCGCACCCGCACCCAAGGCAGGTCCCC
GCTGTGGCCGGGCTGGGACGGCTCGGTCTCCCGGAACGATGCCTTAGCTG
CCTTCGCCGCGACGCCGCCGCTGCCCACCCCGCTTTTGATCAAGACGGCT
GGCGATGACAACGGCGATGGCGAAGGCGGCGGCGAAGAGAGCCAGGGCGG
CCAAGGGAGCGGAGGAACGACAGCAGCGGAGCCCAAAACCGGCATCGACA
GCAGGGGCGGCGGCGGCGGCATCGGCGGCATGGACCCGTGCGACCTTGAC
GCGGAGGCTCTGAGCTTCTGGGCCGCGCAGAACGTGGAGGCCGGCGCCCT
GGTGAAGCACGAGTGGCTTTCGTCCACGTCGACGGCGGAGCGACTGAGGG
GGGTGCGGGACCTGTGCAGGTTCGCTCTGGCGAGACACCGCGACCGGAGC
GGGGTGGACGGGGCCATCCTGTCTCGGCCACTTTCGGCGCTGCGCGACCT
CACGTTTAGGTAGGTGTCCGCCATCATGCAGAAGGAGCTGCACCGCACCC
GCACCCAAGGCAGGTCCCCGCTGTGGCCGGGCTGGGACGGCTCGGTCTCC
CGGAACGATGCCTTAGCTGCCTTCGCCGCGACGCCGCCGCTGCCCACCCC
GCTTTTGATCAAGACGGCTGGCGATGACAACGGCGATGGCGAAGGCGGCG
GCGAAGAGAGCCAGGGCGGCCAAGGGAGCGGAGGAACGACAGCAGCGGAG
CCCAAAACCGGCATCGACAGCAGGGGCGGCGGCGGCGGCATCGGCGGCAT
GGACCCGTGCGACCTTGACGCGGAGGCTCTGAGCTTCTGGGCCGCGCAGA
ACGTGGAGGCCGGCGCCCTGGTGAAGCACGAGTGGCTTTCGTCCACGTCG
ACGGCGGAGCGACTGAGGGGGGTGCGGGACCTGTGCAGGTTCGCTCTGGC
GAGACACCGCGACCGGAGCGGGGTGGACGGGGCCATCCTGTCTCGGCCAC
TTTCGGCGCTGCGCGACCTCACGTTTAGGTAG
back to top