mRNA_P-fluviatile_contig8.14416.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14416.1
Unique NamemRNA_P-fluviatile_contig8.14416.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14416.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:1210244..1210960 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons1
Model size717
Cds size717
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817218.224217-CDS-P-fluviatile_contig8:1210243..12109601622817218.224217-CDS-P-fluviatile_contig8:1210243..1210960Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1210244..1210960 +
1693571543.846644-CDS-P-fluviatile_contig8:1210243..12109601693571543.846644-CDS-P-fluviatile_contig8:1210243..1210960Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1210244..1210960 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14416.1prot_P-fluviatile_contig8.14416.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 1210244..1210960 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14416.1

>prot_P-fluviatile_contig8.14416.1 ID=prot_P-fluviatile_contig8.14416.1|Name=mRNA_P-fluviatile_contig8.14416.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=239bp
MSAIRCTSQTSTIWIWTTSRRVFALPPSPSRRTQRRPGTRYSTASRRPWS
AVDTTAARKCDQSTGYVMPLGLYVRRSVNRPQPFYIEGGCSRARLSSVLI
SNGRLIFFHTRYQSYQVHVGSGRSSCARTTGSPPPRLRLPTSRNRGTRHQ
PRCEHFRHFIFLLPDNVVCCYRDFPYQTRPLFICPALVYFKASTVYLAGS
ELFDVPLPCHVGSRLPCFFFQGKHVVPPLLLLFRRRPS*
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mRNA from alignment at P-fluviatile_contig8:1210244..1210960+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14416.1 ID=mRNA_P-fluviatile_contig8.14416.1|Name=mRNA_P-fluviatile_contig8.14416.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=717bp|location=Sequence derived from alignment at P-fluviatile_contig8:1210244..1210960+ (Porterinema fluviatile SAG_2381)
ATGTCAGCGATCCGGTGCACAAGTCAGACGTCCACGATCTGGATCTGGAC
TACGAGTCGAAGGGTGTTCGCGCTCCCACCTTCGCCGAGTCGGAGAACCC
AGAGAAGACCTGGGACGAGATATTCGACAGCATCAAGAAGGCCTTGGTCA
GCCGTGGACACAACTGCTGCACGAAAGTGCGATCAATCGACCGGGTACGT
GATGCCACTCGGTTTGTATGTTCGCCGGTCGGTGAATCGTCCACAGCCAT
TCTATATTGAGGGAGGTTGTTCACGTGCCCGGCTCTCGTCTGTTTTGATA
TCCAACGGTCGCTTGATATTTTTCCACACAAGGTATCAAAGCTACCAGGT
GCACGTTGGAAGCGGAAGGAGCTCGTGTGCAAGAACCACGGGAAGTCCAC
CGCCACGCCTAAGGTTGCCAACGTCGAGAAACAGAGGAACACGTCATCAG
CCAAGGTGTGAACATTTCCGGCACTTTATCTTCTTGCTTCCTGACAACGT
TGTATGTTGCTACCGAGATTTTCCCTACCAAACGCGTCCCTTGTTCATCT
GCCCAGCTTTGGTATATTTTAAGGCGTCTACAGTATACCTCGCTGGTTCG
GAACTTTTCGACGTGCCTCTGCCGTGCCACGTCGGCTCCCGGTTGCCCTG
TTTTTTTTTTCAAGGGAAGCATGTAGTCCCCCCGCTTCTCCTATTGTTCC
GGCGACGGCCCTCTTAA
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:1210244..1210960+

>mRNA_P-fluviatile_contig8.14416.1 ID=mRNA_P-fluviatile_contig8.14416.1|Name=mRNA_P-fluviatile_contig8.14416.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1434bp|location=Sequence derived from alignment at P-fluviatile_contig8:1210244..1210960+ (Porterinema fluviatile SAG_2381)
ATGTCAGCGATCCGGTGCACAAGTCAGACGTCCACGATCTGGATCTGGAC
TACGAGTCGAAGGGTGTTCGCGCTCCCACCTTCGCCGAGTCGGAGAACCC
AGAGAAGACCTGGGACGAGATATTCGACAGCATCAAGAAGGCCTTGGTCA
GCCGTGGACACAACTGCTGCACGAAAGTGCGATCAATCGACCGGGTACGT
GATGCCACTCGGTTTGTATGTTCGCCGGTCGGTGAATCGTCCACAGCCAT
TCTATATTGAGGGAGGTTGTTCACGTGCCCGGCTCTCGTCTGTTTTGATA
TCCAACGGTCGCTTGATATTTTTCCACACAAGGTATCAAAGCTACCAGGT
GCACGTTGGAAGCGGAAGGAGCTCGTGTGCAAGAACCACGGGAAGTCCAC
CGCCACGCCTAAGGTTGCCAACGTCGAGAAACAGAGGAACACGTCATCAG
CCAAGGTGTGAACATTTCCGGCACTTTATCTTCTTGCTTCCTGACAACGT
TGTATGTTGCTACCGAGATTTTCCCTACCAAACGCGTCCCTTGTTCATCT
GCCCAGCTTTGGTATATTTTAAGGCGTCTACAGTATACCTCGCTGGTTCG
GAACTTTTCGACGTGCCTCTGCCGTGCCACGTCGGCTCCCGGTTGCCCTG
TTTTTTTTTTCAAGGGAAGCATGTAGTCCCCCCGCTTCTCCTATTGTTCC
GGCGACGGCCCTCTTAAATGTCAGCGATCCGGTGCACAAGTCAGACGTCC
ACGATCTGGATCTGGACTACGAGTCGAAGGGTGTTCGCGCTCCCACCTTC
GCCGAGTCGGAGAACCCAGAGAAGACCTGGGACGAGATATTCGACAGCAT
CAAGAAGGCCTTGGTCAGCCGTGGACACAACTGCTGCACGAAAGTGCGAT
CAATCGACCGGGTACGTGATGCCACTCGGTTTGTATGTTCGCCGGTCGGT
GAATCGTCCACAGCCATTCTATATTGAGGGAGGTTGTTCACGTGCCCGGC
TCTCGTCTGTTTTGATATCCAACGGTCGCTTGATATTTTTCCACACAAGG
TATCAAAGCTACCAGGTGCACGTTGGAAGCGGAAGGAGCTCGTGTGCAAG
AACCACGGGAAGTCCACCGCCACGCCTAAGGTTGCCAACGTCGAGAAACA
GAGGAACACGTCATCAGCCAAGGTGTGAACATTTCCGGCACTTTATCTTC
TTGCTTCCTGACAACGTTGTATGTTGCTACCGAGATTTTCCCTACCAAAC
GCGTCCCTTGTTCATCTGCCCAGCTTTGGTATATTTTAAGGCGTCTACAG
TATACCTCGCTGGTTCGGAACTTTTCGACGTGCCTCTGCCGTGCCACGTC
GGCTCCCGGTTGCCCTGTTTTTTTTTTCAAGGGAAGCATGTAGTCCCCCC
GCTTCTCCTATTGTTCCGGCGACGGCCCTCTTAA
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