mRNA_P-fluviatile_contig8.14402.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14402.1
Unique NamemRNA_P-fluviatile_contig8.14402.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig8.14402.1 vs. uniprot
Match: A0A6H5JHQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ0_9PHAE)

HSP 1 Score: 367 bits (942), Expect = 7.150e-101
Identity = 450/1082 (41.59%), Postives = 524/1082 (48.43%), Query Frame = 3
Query:  354 AAVAVVPAPSRLISARRAASGTV-TDILGCVEVGAG-GVGSRSDREGAITKALAKGSSLQEAVGXXXXXXXXXSWTGGRRSISVGGDLSSLAREAGGGRGGAVEWGGREVASTAKEFGAVQPLTAVVAVVELPSPVSDDPAAVSASQXXXXXXXXXXXXXXXTSADGGGAKLGQTSFIGKSSSSSQLSRMPELRLGGGXXGAGTDAVGSRASFTLPLARAAEEPGGPFGGLPAGGTRVLSAPATIGGGKLTARTGSVGSASXXXXXXXXXXXXGRGGLMPRKERRLDILGQNRFTPRKDYPPSSMLFQAMRFHYGNDYSSRDLPDTPAACWALVFSAQESRRGAARKFSSANYIAEEPPAYDVESTRAPLDTSS---------TGTQPIIRTHSSEVNMGVAGATSGGEGERGGVGGAAGFRPTSA---------GFAXXXXXXXXXXGTQNSSRPRSLPIGSRRGIVGGGDDGSNSMALLKNTLLSGHRGRRNAEGSSRA--------GLGSSSSGVSPATXXAGXXXXXSELEAAAGEETSPKQERDGGGSAVDGRGGRGGIGLWSGGQVSPAGMSSDGALSSSSPAVTGGRYNPP-RSSRNRESSGASLSSATSIEWGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLASGVWGANDPYVLSASDLPGQQKGYVGAEPRQREAEEXXXXXXXSPNRSPGAGGXXXXXXXXXXXXXXXXXXX---------------------------REGFEKIRTRSRSHSMHMTDLGGQGLDLPINTFSCTVGLKLSQANYYIKSSLAAAALCKE-----LSQVKDKEEYGSYEGYEDGGSMFVQQGYAVANQQGAARAPPHTSSASNIADLDIVMGSQFPEDSGGG--------GERYHP---SGRSSRRSLTPSLNYNQISAGWADFAESIEPS---------GXXXXXXXXXXXXXXXGRNGFRGRDFELPGGSANGGLPGVFSGGREKGRKKEGAAFRSGILKHVRSAGSLSLAA 3356
            AA +VV +P+  +  R  +SGT+ + + G V VG G GV  RS RE AI  ALAKGSSLQEAV             G  RS+SVGGDLSSL+  +       +E G     + A    A +P   V+                                        GG K   TS I + SSS QL    ++ LG G  G            +LP+A AA+       G    G RV SAP                   XXXXXXXXXXXX    L+P++ RRLDI GQN+FTPRKDYPPSSMLFQAMR HYGNDYSSRDLPDTPAACWALV SAQE+RRG  RK S+A Y+ E+P  YD EST AP   S+         +G+             G   AT GG+ +RGG+ G  GFRP  A         G  XXXXXXXXXX     +RP SLP+G+R G +GG                                       G            XX  XX       +AA                                                          PP R +R+RE S ASL S +S++ G XXXXXXXXXXXXXXXXXXXXXX                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          + +  W  +D YV    DLPGQQKG+VGAEPRQ EA +               G                                               REG EK+RTRSRSHSMHM D+G  GLDLPINTFSCTVGLKLSQANYYIKSS AAAALCKE     LSQVKDKE+YGS+EGYEDG  ++VQ  YAVANQQGAA+APPHTSSASNIADLDIVMGSQFP+ + G         G+R+ P    GRS++RSLTPS+NYNQ+S  W+DFAE+I+                           GR G    DF+ P  S   G     SGG        G+ +R G +KH RSAGS+S +A
Sbjct:  472 AATSVVRSPAARLLPRMGSSGTLGSGLRGGVGVGVGEGVIGRSRRESAILNALAKGSSLQEAV-------RDKGLGGAARSVSVGGDLSSLSASS------MIEAGEAATGAGAMGSAAAEPAAGVMRAA-------------------------------------GGLKKTGTSSIDRVSSSPQLPHGSDVLLGAGAAG------------SLPMAEAADS----GSGAQPRGMRVSSAPQXX------------XXXXXXXXXXXXXXXXXXXXLVPKRNRRLDISGQNKFTPRKDYPPSSMLFQAMRTHYGNDYSSRDLPDTPAACWALVVSAQEARRGT-RKLSTAKYMHEQPATYDAESTMAPPSPSAGQWRTPNGGSGSAXXXXXXXXXXXXGAGAATGGGDEDRGGLFGP-GFRPALASQSSTGSISGXXXXXXXXXXXXXXXXXTRPLSLPVGARDGDIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSWLKHGXXXXXXXXXXXXEPRGRYPSAASXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXGPPLRHNRHREVSEASLVSVSSVDEGRXXXXXXXXXXXXXXXXXXXXXXPTVREEATVVGPKEVGGGAARVADKSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGV-------MRTTGWSEDDAYVAPVGDLPGQQKGFVGAEPRQWEAGKRAHEQQRGXXXXXXGGSVSGDLYPAAARDLLMAGAAXXXXXXXXXXGXXXXXXXXXXXXXGGGREGLEKVRTRSRSHSMHMGDVGVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKEAIVGPLSQVKDKEDYGSFEGYEDGAGVYVQ--YAVANQQGAAKAPPHTSSASNIADLDIVMGSQFPDGNSGXXXXXXXATGDRFQPMGYQGRSAKRSLTPSMNYNQVSTAWSDFAEAIDAKHVDDGAGGFSDLVSGAAGGNGQFGGGRGGLNDWDFDPPD-SVPAGFT-TLSGG--------GSGYRPGTMKHARSAGSISTSA 1443          
BLAST of mRNA_P-fluviatile_contig8.14402.1 vs. uniprot
Match: D7G2K1_ECTSI (Alpha,alpha-trehalose-phosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K1_ECTSI)

HSP 1 Score: 348 bits (894), Expect = 1.990e-99
Identity = 399/942 (42.36%), Postives = 466/942 (49.47%), Query Frame = 3
Query:  336 GTTTVPAAVAVVPAPSRLISARRAASGTV-TDILGCVEVGAG-GVGSRSDREGAITKALAKGSSLQEAVGXXXXXXXXXSWTGGRRSISVGGDLSSLAREAGGGRGGAVEWGGREVASTAKEFGAVQPLTAVVAVVELPSPVSDDPAAVSASQXXXXXXXXXXXXXXXTSADGGGAKLGQTSFIGKSSSSSQLSRMPELRLGGGXXGAGTDAVGSRASFTLPLARAAEEPGGPFGGLPA-GGTRVLSAPATIGGGKLTARTGSVGSASXXXXXXXXXXXXGRGGLMPRKERRLDILGQNRFTPRKDYPPSSMLFQAMRFHYGNDYSSRDLPDTPAACWALVFSAQESRRGAARKFSSANYIAEEPPAYDVESTRAPLDTSSTGTQPIIRTHSSEVNMGVAGATSGGEGERGGVGGAAGFRPTSAGFAXXXXXXXXXXGTQNSSRPRSLPIGSRRGIVGGGDDGSNSMALLKNTLLSGHRGRRNAEGSSRAGLGSSSSGVSPATXXAGXXXXXSELEAAAGEETSPKQERDGGGSAVDGRGGRGGIGLWSGGQVSPAGMSSDGALSSSSPAVTGGRYNPPRSSRNRESSGASLSSATSIEWGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLASGVWGANDPYVLSASDLPGQQKGYVGAEPRQREAEEXXXXXXXSPNRSPGAGGXXXXXXXXXXXXXXXXXXX---------REGFEKIRTRSRSHSMHMTDLGGQGLDLPINTFSCTVGLKLSQANYYIKSSLAAAALCKELSQVKDKEEYGSYEGYEDGGSMFVQQGYAVANQQGAARAPPHTSSASNIADLDIVMGSQFPEDSGGG---------GERYHPSG---RSSRRSLTPSLNYNQ 3089
            G     AAV+VV +P+  +  R ++SGT+ + + G V V  G GV  RS RE AI  ALAKGSSLQEAV             GG RS+SVGGDLSSL+                  AS+  E G                          A+ XXXXXXXXXXXXXXX     GG K  +TS I + SSS QL   P++ LG G  G            +LP+A AA+      G +   GG RV SAP      ++ A   +  SA             G GGL+P++ RRLDI GQN+FTPRKDYPPSSMLFQAMR HYGNDYSSRDLPDTPAACWALV SAQE+RRG  RK S+ANY+ E+P  YD E+                     E + G  G   G EG  GG G   G  P++A  A     XXXXX                               L         R  R+ E S+ A LGS SS                       EE   ++ R G   +                +++PA           +P V             RE   AS++    +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXX                                              + +  W  +DPYV    DLPGQQKG+VGAEPRQ EA +               G                             REG EK+RTRSRSHSMHM D+G  GLDLPINTFSCTVGLKLSQANYYIKSS AAAALCKELSQVKDKE+YGS+EGYEDG  ++VQ  YAVANQQGAA+APPHTSSASNIADLDIVMGSQFP+ + G          G+R+ P G   RS++RSLTPS+NYNQ
Sbjct:   58 GAAVPTAAVSVVRSPAARLLPRMSSSGTLGSGLRGGVGVDVGEGVIGRSRRESAILNALAKGSSLQEAV-------RDKGLGGGTRSVSVGGDLSSLS------------------ASSMIEAG-------------------------EAAAXXXXXXXXXXXXXXXXXXAAGGLKKSRTSSIDRVSSSPQLPHGPDVLLGAGAAG------------SLPMAEAADS-----GSVAQPGGMRVSSAP------QVPAAAAAGSSAG------------GLGGLVPKRNRRLDISGQNKFTPRKDYPPSSMLFQAMRTHYGNDYSSRDLPDTPAACWALVVSAQEARRGT-RKLSTANYMQEQPATYDAET---------------------EGSRGKHGGGRG-EGVEGGGGEPRGRDPSAASSAGNWDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPPL---------RHDRHREVSA-ASLGSVSS---------------------VDEERGRERGRSGAARSTSA-------------EMAPA----------LAPTV-------------REE--ASIAGPEEVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPRMPQGDXXXXXXXV---------------------------------------------VKTTGWSGDDPYVAPVGDLPGQQKGFVGAEPRQWEAGKRAHEQQRGXXXXXXGGSVSGDLYPAAARDLLMAGPAGGVGAGGGGREGLEKVRTRSRSHSMHMGDIGVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKELSQVKDKEDYGSFEGYEDGAGVYVQ--YAVANQQGAAKAPPHTSSASNIADLDIVMGSQFPDGNSGXXXXXXXXATGDRFQPMGYLGRSAKRSLTPSMNYNQ 775          
BLAST of mRNA_P-fluviatile_contig8.14402.1 vs. uniprot
Match: A0A8J2X0D0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X0D0_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 5.770e-10
Identity = 45/103 (43.69%), Postives = 62/103 (60.19%), Query Frame = 3
Query: 1197 RRLDILGQNRFTPRKDYPPSSMLFQAMRFHYGNDYSSRDLPDTPAACWALVFSAQESRRGAARKFSSANYIAEEPPAYDVESTRA-PLDTSSTGTQPIIRTHS 1502
            RR D++ +  F PR+D+PPS+MLFQAMR  YG D+S  DLP + +ACWALV   +  R GA R   S  ++AE    + V+S    P    +T  QP++R  S
Sbjct: 1012 RRADLVARREFNPRRDFPPSAMLFQAMRRRYGRDWSRVDLPTSASACWALV-GGRTPRPGAPRAERS-TFLAEFEDLHGVDSPDVLPSLAEATSGQPLVRQRS 1112          
BLAST of mRNA_P-fluviatile_contig8.14402.1 vs. uniprot
Match: A0A7S3XLJ3_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLJ3_HETAK)

HSP 1 Score: 70.9 bits (172), Expect = 8.260e-9
Identity = 32/69 (46.38%), Postives = 49/69 (71.01%), Query Frame = 3
Query: 1197 RRLDILGQNRFTPRKDYPPSSMLFQAMRFHYGNDYSSRDLPDTPAACWALVFSAQESRRGAARKFSSAN 1403
            R+ DI G+ +F PR D+PP+ +L+QAM+  YG + S+ +LP+TPAACWALV++   S R   R  S+++
Sbjct:  159 RQTDITGRKKFEPRMDFPPAGILYQAMKRKYGPNVSNFELPETPAACWALVYTMVPSLRHVVRTESTSS 227          
BLAST of mRNA_P-fluviatile_contig8.14402.1 vs. uniprot
Match: A0A329SM09_9STRA (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A n=13 Tax=Phytophthora TaxID=4783 RepID=A0A329SM09_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 8.300e-9
Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 3
Query: 1185 PRKERRLDILGQNRFTPRKDYPPSSMLFQAMRFHYGNDYSSRDLPDTPAACWALV 1349
            P   RR +I  +++FTPR+D+PPS+ LF+AMR  YG+++    LPDTPAACWALV
Sbjct: 1009 PSNARRDEITEKSKFTPRRDFPPSAALFKAMRVKYGDNFGIHRLPDTPAACWALV 1063          
BLAST of mRNA_P-fluviatile_contig8.14402.1 vs. uniprot
Match: H3GTK8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTK8_PHYRM)

HSP 1 Score: 71.2 bits (173), Expect = 1.840e-8
Identity = 30/55 (54.55%), Postives = 42/55 (76.36%), Query Frame = 3
Query: 1185 PRKERRLDILGQNRFTPRKDYPPSSMLFQAMRFHYGNDYSSRDLPDTPAACWALV 1349
            P   RR +I  +++FTPR+D+PPS+ LF+AM+  YG+++    LPDTPAACWALV
Sbjct:  934 PSNARRDEITEKSKFTPRRDFPPSAALFKAMKVKYGDNFGIHRLPDTPAACWALV 988          
BLAST of mRNA_P-fluviatile_contig8.14402.1 vs. uniprot
Match: A0A6A3MPS8_9STRA (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MPS8_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.890e-8
Identity = 30/55 (54.55%), Postives = 42/55 (76.36%), Query Frame = 3
Query: 1185 PRKERRLDILGQNRFTPRKDYPPSSMLFQAMRFHYGNDYSSRDLPDTPAACWALV 1349
            P   RR +I  +++FTPR+D+PPS+ LF+AM+  YG+++    LPDTPAACWALV
Sbjct: 1024 PSNARRDEITEKSKFTPRRDFPPSAALFKAMKVKYGDNFGIHRLPDTPAACWALV 1078          
BLAST of mRNA_P-fluviatile_contig8.14402.1 vs. uniprot
Match: A0A662XC19_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XC19_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.940e-8
Identity = 30/55 (54.55%), Postives = 42/55 (76.36%), Query Frame = 3
Query: 1185 PRKERRLDILGQNRFTPRKDYPPSSMLFQAMRFHYGNDYSSRDLPDTPAACWALV 1349
            P   RR +I  +++FTPR+D+PPS+ LF+AM+  YG+++    LPDTPAACWALV
Sbjct: 1153 PSNARRDEITEKSKFTPRRDFPPSAALFKAMKVKYGDNFGIHRLPDTPAACWALV 1207          
BLAST of mRNA_P-fluviatile_contig8.14402.1 vs. uniprot
Match: K3WI94_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WI94_GLOUD)

HSP 1 Score: 70.5 bits (171), Expect = 2.870e-8
Identity = 29/56 (51.79%), Postives = 43/56 (76.79%), Query Frame = 3
Query: 1182 MPRKERRLDILGQNRFTPRKDYPPSSMLFQAMRFHYGNDYSSRDLPDTPAACWALV 1349
            +P   RR +I  +++FTPR+D+PPS+ L++AM+  YG+++    LPDTPAACWALV
Sbjct:  708 IPSNARRDEITERSKFTPRRDFPPSAALYKAMKSKYGDNFGMHALPDTPAACWALV 763          
BLAST of mRNA_P-fluviatile_contig8.14402.1 vs. uniprot
Match: A0A0P1A8Y1_PLAHL (-trehalose-phosphate synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8Y1_PLAHL)

HSP 1 Score: 68.2 bits (165), Expect = 1.610e-7
Identity = 27/48 (56.25%), Postives = 39/48 (81.25%), Query Frame = 3
Query: 1206 DILGQNRFTPRKDYPPSSMLFQAMRFHYGNDYSSRDLPDTPAACWALV 1349
            +I  +++FTPR+D+PPS+ LF+AM+  YG+++    LPDTPAACWALV
Sbjct: 1019 EITEKSKFTPRRDFPPSAALFKAMKVKYGDNFGLHRLPDTPAACWALV 1066          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5JHQ0_9PHAE7.150e-10141.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2K1_ECTSI1.990e-9942.36Alpha,alpha-trehalose-phosphate synthase n=1 Tax=E... [more]
A0A8J2X0D0_9STRA5.770e-1043.69Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3XLJ3_HETAK8.260e-946.38Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A329SM09_9STRA8.300e-956.36Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
H3GTK8_PHYRM1.840e-854.55Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6A3MPS8_9STRA1.890e-854.55Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
A0A662XC19_9STRA1.940e-854.55Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
K3WI94_GLOUD2.870e-851.79Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0P1A8Y1_PLAHL1.610e-756.25-trehalose-phosphate synthase n=1 Tax=Plasmopara h... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:1107781..1117140 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score73.2
Seed ortholog evalue6.5e-10
Seed eggNOG ortholog164328.Phyra80488
KEGG rclassRC00005,RC00017,RC00049,RC02748
KEGG koko:K16055
KEGG ReactionR02737,R02778
KEGG Pathwayko00500,ko01100,map00500,map01100
EggNOG free text desc.Trehalose-phosphatase
EggNOG OGs3QCMS@4776,COG1877@1,KOG1050@2759
EC2.4.1.15,3.1.3.12
COG Functional cat.G
CAZyGT20
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionalpha,alpha-trehalose-phosphate synthase
Ec32 orthologEc-11_002530.1
Exons8
Model size4946
Cds size2484
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14402.1prot_P-fluviatile_contig8.14402.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 1109329..1116226 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817229.6693995-UTR-P-fluviatile_contig8:1107780..11093281622817229.6693995-UTR-P-fluviatile_contig8:1107780..1109328Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1107781..1109328 -
1693571579.9149694-UTR-P-fluviatile_contig8:1107780..11093281693571579.9149694-UTR-P-fluviatile_contig8:1107780..1109328Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1107781..1109328 -
1622817229.776379-UTR-P-fluviatile_contig8:1116226..11171401622817229.776379-UTR-P-fluviatile_contig8:1116226..1117140Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1116227..1117140 -
1693571580.1769261-UTR-P-fluviatile_contig8:1116226..11171401693571580.1769261-UTR-P-fluviatile_contig8:1116226..1117140Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 1116227..1117140 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817229.6838899-CDS-P-fluviatile_contig8:1109328..11097301622817229.6838899-CDS-P-fluviatile_contig8:1109328..1109730Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1109329..1109730 -
1693571580.0912116-CDS-P-fluviatile_contig8:1109328..11097301693571580.0912116-CDS-P-fluviatile_contig8:1109328..1109730Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1109329..1109730 -
1622817229.6945238-CDS-P-fluviatile_contig8:1110885..11110621622817229.6945238-CDS-P-fluviatile_contig8:1110885..1111062Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1110886..1111062 -
1693571580.1011047-CDS-P-fluviatile_contig8:1110885..11110621693571580.1011047-CDS-P-fluviatile_contig8:1110885..1111062Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1110886..1111062 -
1622817229.7045333-CDS-P-fluviatile_contig8:1111499..11116121622817229.7045333-CDS-P-fluviatile_contig8:1111499..1111612Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1111500..1111612 -
1693571580.1093612-CDS-P-fluviatile_contig8:1111499..11116121693571580.1093612-CDS-P-fluviatile_contig8:1111499..1111612Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1111500..1111612 -
1622817229.7178543-CDS-P-fluviatile_contig8:1111949..11121591622817229.7178543-CDS-P-fluviatile_contig8:1111949..1112159Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1111950..1112159 -
1693571580.12253-CDS-P-fluviatile_contig8:1111949..11121591693571580.12253-CDS-P-fluviatile_contig8:1111949..1112159Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1111950..1112159 -
1622817229.7289212-CDS-P-fluviatile_contig8:1112658..11137151622817229.7289212-CDS-P-fluviatile_contig8:1112658..1113715Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1112659..1113715 -
1693571580.1344821-CDS-P-fluviatile_contig8:1112658..11137151693571580.1344821-CDS-P-fluviatile_contig8:1112658..1113715Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1112659..1113715 -
1622817229.7399335-CDS-P-fluviatile_contig8:1114783..11148611622817229.7399335-CDS-P-fluviatile_contig8:1114783..1114861Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1114784..1114861 -
1693571580.1441987-CDS-P-fluviatile_contig8:1114783..11148611693571580.1441987-CDS-P-fluviatile_contig8:1114783..1114861Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1114784..1114861 -
1622817229.754363-CDS-P-fluviatile_contig8:1115330..11154201622817229.754363-CDS-P-fluviatile_contig8:1115330..1115420Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1115331..1115420 -
1693571580.1532567-CDS-P-fluviatile_contig8:1115330..11154201693571580.1532567-CDS-P-fluviatile_contig8:1115330..1115420Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1115331..1115420 -
1622817229.765944-CDS-P-fluviatile_contig8:1115869..11162261622817229.765944-CDS-P-fluviatile_contig8:1115869..1116226Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1115870..1116226 -
1693571580.1629155-CDS-P-fluviatile_contig8:1115869..11162261693571580.1629155-CDS-P-fluviatile_contig8:1115869..1116226Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 1115870..1116226 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14402.1

>prot_P-fluviatile_contig8.14402.1 ID=prot_P-fluviatile_contig8.14402.1|Name=mRNA_P-fluviatile_contig8.14402.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=828bp
MPELRLGGGGGGAGTDAVGSRASFTLPLARAAEEPGGPFGGLPAGGTRVL
SAPATIGGGKLTARTGSVGSASGGGGGGGGGGAAGRGGLMPRKERRLDIL
GQNRFTPRKDYPPSSMLFQAMRFHYGNDYSSRDLPDTPAACWALVFSAQE
SRRGAARKFSSANYIAEEPPAYDVESTRAPLDTSSTGTQPIIRTHSSEVN
MGVAGATSGGEGERGGVGGAAGFRPTSAGFAAAAAAAAAAAGTQNSSRPR
SLPIGSRRGIVGGGDDGSNSMALLKNTLLSGHRGRRNAEGSSRAGLGSSS
SGVSPATSGAGGGSGGSELEAAAGEETSPKQERDGGGSAVDGRGGRGGIG
LWSGGQVSPAGMSSDGALSSSSPAVTGGRYNPPRSSRNRESSGASLSSAT
SIEWGGRPPLKEEEGEDDDDDDDDDECAAAAAAAAAMAAADAAAGGTSGE
SPDGGGGGTVTRSGGSALEHSAAASSSASLSAGERPSSQQTTTAAAAAAA
GLASGVWGANDPYVLSASDLPGQQKGYVGAEPRQREAEERGRGRGDSPNR
SPGAGGRGGRGGGESSGTAVGGGGGREGFEKIRTRSRSHSMHMTDLGGQG
LDLPINTFSCTVGLKLSQANYYIKSSLAAAALCKELSQVKDKEEYGSYEG
YEDGGSMFVQQGYAVANQQGAARAPPHTSSASNIADLDIVMGSQFPEDSG
GGGERYHPSGRSSRRSLTPSLNYNQISAGWADFAESIEPSGGGGGGGTAN
DSASGGGRNGFRGRDFELPGGSANGGLPGVFSGGREKGRKKEGAAFRSGI
LKHVRSAGSLSLAASSSSSSFPSGGNK*
back to top

mRNA from alignment at P-fluviatile_contig8:1107781..1117140-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14402.1 ID=mRNA_P-fluviatile_contig8.14402.1|Name=mRNA_P-fluviatile_contig8.14402.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9360bp|location=Sequence derived from alignment at P-fluviatile_contig8:1107781..1117140- (Porterinema fluviatile SAG_2381)
ACGGCGGCGGCGGCGGGACCGGCGGAAGGGAAGCCGATGGCCGCGGCTCT TGCGGCTCTAGGGGAGTTCGATCCCGTGCGGCCACGTACGCTGGCCTCAT CGCTCCGCGAGTCGTCTTCCCTGTCGCCGTCGCCGCGGTCGCCGCCGTTC ACGGCCGAGCCACTCCGACGAAGGGCGTCTTCTCCCGTTTTGCCTTCGCT GGACGCGGAGGATGCGGCGGCGGCGGCGGCGGCGGAAGAGTGGTCATCGC CGCTACGCGACGACCCTGCGGCGGGAGCTGGTGTCGACGGCGGTGCCGGG GGCCGTTGCTGAGTAGGAAAACGTCCTGGTTGGCGGGGACTACTACGGTG CCGGCGGCGGTGGCCGTCGTTCCCGCCCCCTCGCGGCTCATCTCGGCAAG GAGAGCGGCGTCGGGGACCGTGACGGACATACTGGGGTGTGTGGAAGTCG GCGCGGGTGGCGTGGGATCGCGAAGCGACAGGGAGGGCGCAATCACCAAG GCGCTAGCAAAGGGGTCGTCGCTACAGGAGGCTGTCGGCGGCGGCGGCGG CGGCAGCGAGAAGAAGAGTTGGACCGGCGGGAGAAGGAGCATCAGCGTAG GCGGCGACCTTTCGTCTCTTGCAAGAGAAGCAGGAGGAGGACGAGGAGGA GCGGTGGAATGGGGCGGGCGCGAGGTAGCGTCGACGGCGAAGGAGTTCGG GGCGGTGCAGCCGCTCACGGCGGTGGTGGCGGTGGTGGAGCTGCCATCGC CGGTTTCGGACGACCCGGCCGCCGTTTCCGCGAGCCAGTCTGCGGCTTCG GAGGCTGCCGCCGCCGCGGCCGTGTCGGTGGCCACAAGCGCGGATGGCGG GGGCGCGAAGCTCGGACAGACCTCTTTTATTGGCAAGTCCTCGTCCTCGT CTCAGCTGTCGCGGATGCCGGAATTGCGGCTCGGCGGCGGCGGCGGCGGC GCTGGTACCGATGCCGTGGGATCCCGTGCTTCCTTCACCTTGCCATTGGC GAGGGCTGCGGAAGAGCCCGGCGGTCCGTTCGGCGGGTTACCAGCAGGTG GAACAAGAGTTTTGTCGGCACCCGCTACCATCGGCGGCGGCAAACTTACT GCTAGAACGGGCAGCGTCGGATCTGCGAGCGGCGGCGGCGGCGGTGGCGG CGGTGGCGGCGCCGCCGGCCGCGGAGGTCTTATGCCGAGGAAGGAACGAC GTCTGGACATCTTGGGGCAGAATAGGTTCACCCCTAGGAAAGACTACCCG CCCTCATCGATGTTATTTCAGGTGTGTGTGTGCTCGATGATGTGCGTGCT GTGGTTTGTGCAAAACCGGTTCGCGACTGTGACTTCTCATGTCGTGCTTG AGTGTATTTCTCATGCTTGTGCGTGTTGCGGAGACGGCACGGATTCCAAA GCGACGCTCGAGTTACGTTTTCTCGCATTGCATTATTTCAACGAACACGC CATATGTGTTTGGGGATTGTGACTGGCTTTCCCGTCACTTCTCCCCAGCG GAAAATTAGGCGGACCCTAGTTGTTTTTTCATGTTGAACGCGTTCGATTT ACCCCGAGCTTCTGTTCACCGTTTTTCTTTACATTTTTTTGCCGTTCTCT CGTCCCTCGATCCCTCTGGCTCCGCGTGTTTGGCGCCGATGATTCAACCC CCCCCTCCCCCTCCCCTTCCCCTGGCGCGCGCCTTTGCTTCCCTTCGACC GCGAAAAAATCGGGCAAAAGGCTATGCGCTTCCACTACGGGAACGACTAC AGCTCGAGGGACCTTCCTGACACTCCCGCCGCTTGTTGGGCTTTAGTGTT CAGCGCTCAGGTGGGTGCGCGCGCGCGCCCCTCGGCCTATCTTCCGGCTG CGAAGCTGTGGAGTTTGCTGGATCTGTATCGCTTTTTCGGATGGAATCTC TGCACTCTGTGCTCCGGAAAACCCGGCGTTTTTTTTCTTTTTAATGAGGC ACAGAAACGAGAAAACGCCGAAATGACAACATACAACGGTCGGTGCCGAT CGATGCCCCTGCTTTTGTTTCCCTGTCGCGTGGCCTACCGGAGGACGAGA GCGACCCCTAGTGTGGCGTGACGCGACGCGATGCCGTTTGGCGCCTCTTT CGGCACTCCAACTCCGCAGTCCCCTCCTATTCTTTGCTCCCTCTGCTGCG TCGAGCGTGCGTGTGTGTACGTGCTCTTGTTCCAACCATGCTTTTGCAAC ATCGCCGACGCGGTTCACGGGAAACTGGCTCTCCCCTCTCCCCCCCCCAC TCACATACGCCGGGTTTTTTGTTAAACAGGAGTCTCGGAGAGGGGCGGCG CGAAAATTCTCGTCGGCGAACTACATCGCAGAAGAGCCACCGGCCTACGA CGTGGAGGTGCGGCCGGCACGTATCCGTGTGACATTTTATATTTGTGTGT CGGTGCGTGCGGCGCCGCTATGTTGCGGCCTGTGTGGTGTGTGCTCCTTC GGATATGTGCCCCGCCGGGGGAGACTAGGCTTGAGGGCTTCGGAAGAGTT AGGGAGGGGAAGGTGGGGGGAATGAGCTGACTGGGAGGCCACGTCCTCCA CGCCACCCCTCCCCCCTGCCGAATGCAACACGACCAAGCTACGTGAGTCG TTGCCCAAGGAAGTCGGCATAACCAGTCGATCGGTTTCGCCGCTTCGGAT TACGCCGCGCGCATCCCCAGTCCGCTCGCGCAACTCGCTGGCAGCAAGAG CCAGGCCTGGTGGTCGCGGCGACCGTACGGCGCGACCGAGTAGCCCAGTA ACAGCAGTCTTTTGGCGACACGAGTAGTAGCTGGGCATAGCTCGGGTAAG GGGAACAACTCGTATTTTTTTGTTTTATGGACGAAGAGTACAGGTTTTCA TTCGGGTCCACAATGCAACACCCACACAGTTTTTGCTGCTGCTGGGTTGG TTTGTCCTTGTTTTTTCTGCTTGCCTCTTGATGTTTCGCTTCGTGTTTTT TTTCCTTCTGGTATCCATTTTGATACTCCTTCGGTTTTTTTCAGCCTGTG ACCACGGGATACCACGGGATCGCTTCCGACGGAAAAGGGTACGGACATTT GGAGGTTCTGGAGGTGATCCACAAGTGTTTTGAAATGTGAAGACACCAAC AACAACAACAAAAACAGCAAACTCTCGGGGGGAAAAAAACGCCCCAGCCC TCTCGATTCTGGTAGAAATTGGTATTTTTTGTGAATCTCGTACACAGAGA TCAAGACCTCAAACTTTTTGTTACATATGTCATGCCAATGAGAGAGTTGA CAAAAACGTTCGACTGTAGTAGAAAGGACCAATAGTCTCGGGCCGTTGTT GGCTTTTCGACTGACATCCACGATCGCCCTCCCTTTCCCCCTCTCTTTTG CCGTATTTTCGGCCGGTTCTTCTGTTGGATTGGATTGGTTTGGATGGGAT GGATCCCACTTCGGTCTTCCGGCAGTCGACGAGGGCACCTCTCGACACTT CCTCCACCGGCACACAGCCGATAATCAGAACGCACAGTAGTGAGGTAAAC ATGGGTGTAGCAGGGGCAACATCAGGGGGAGAAGGAGAAAGAGGAGGCGT GGGGGGGGCGGCGGGATTCCGCCCGACAAGCGCGGGGTTTGCCGCCGCCG CCGCCGCCGCCGCCGCCGCTGCGGGGACTCAAAACTCCTCTAGACCGAGG TCGCTGCCGATTGGATCTCGACGGGGCATTGTCGGGGGCGGGGACGACGG CAGCAACTCGATGGCCCTTCTCAAAAACACGCTTCTGAGCGGCCACCGCG GCAGGAGAAACGCCGAAGGGAGCAGCAGAGCGGGCCTCGGCAGCAGCTCG AGCGGTGTTTCCCCCGCCACTTCTGGTGCTGGCGGCGGCAGCGGTGGTTC TGAATTGGAAGCGGCGGCGGGTGAGGAAACGTCACCGAAGCAGGAGCGTG ACGGAGGGGGATCGGCAGTTGATGGCCGCGGTGGCCGCGGCGGTATCGGC CTGTGGAGCGGCGGTCAGGTCTCGCCGGCAGGGATGTCCTCTGACGGCGC CTTGTCATCCTCCTCTCCCGCGGTAACAGGTGGGCGCTACAACCCCCCCC GCTCTAGCCGAAACAGGGAGTCATCGGGCGCCTCCTTGTCCTCGGCCACG TCTATCGAATGGGGAGGCAGGCCGCCGCTGAAGGAGGAAGAAGGCGAGGA CGACGACGACGACGACGATGACGACGAGTGCGCTGCGGCTGCGGCTGCTG CGGCGGCTATGGCGGCAGCGGACGCGGCAGCGGGCGGCACCAGCGGCGAG AGTCCCGACGGAGGCGGCGGCGGCACCGTGACGCGATCAGGAGGCAGCGC TTTGGAGCATTCGGCTGCTGCATCTTCTTCCGCTTCTCTTTCTGCCGGCG AACGTCCCTCGTCGCAGCAGACGACGACGGCGGCGGCGGCGGCGGCGGCG GGGCTGGCGTCGGGCGTGTGGGGGGCGAACGACCCGTACGTGTTGAGCGC CAGCGACCTCCCGGGCCAGCAGAAAGGATACGGTGAGAATGGTCGGCCGT CCATGCCCGCTTTTTCGTCGGTCACCGCTCTCTTGCTTTTCTCTCGCCTC CAATCGATGCTCTTGTTTTCTCGTTCTTGCTCGTAATCTTCGCCTCTTGC GAACGCACACACGCAGCCACCACACGCACAAACAAGCAAAATATACCGCA AACGCATGGGTCTCGGGCTGATACTTTCAATCGTGTGACCTGTGTCTCCC CGCCTTGCTGGCTCTCGGGCAAACGCCTCCTCCTCTCTTTTCCTCCACCC TTTTTTGATTTATCTCGGGGGACTTGACATGAGCTGCTGCTGCTGCACTG CGACGACTGGCGGCGGCGGCGGCGGTAGCGGGGGCGGTATCAAAACAACA AGCCGGCCGGCGTTTCAACTAACCAACCAACCGTCGAGTTAATTGTATGC GCCGCTACCGCTGCCGCCACTACCACGGCCGCCGCCACCACTGACGCCAC CGTCTCCGTTACCGTGCCCAAATGCTAGCAGTCGGCGCCGAGCCACGGCA GCGGGAAGCGGAGGAGCGAGGCCGGGGACGGGGCGACTCCCCAAACCGTT CTCCGGGTGCCGGCGGCCGCGGCGGCCGCGGCGGCGGAGAATCATCGGGA ACGGCGGTGGGCGGCGGTGGAGGTCGGGAGGGCTTCGAGAAGATCCGGAC GAGAAGCCGGTCGCACTCGATGCACATGACCGATTTGGGCGGTGAGGTTT TTCTCGTTTTCATGCCTTCGATCGATCGATCGGGACATCAATGGAGGTTG AGGTAACGACTTATCGTGAGGAACGGGGTGAGTCGCGCCATCCGCCCTCA AACCCCCGCGCCCCCCGAGTGTGTTCGTCTTTCTGTTCGCATGTCAGCGA AGTTCGTTTCCCCGCTCCTTTTCCATTTCCTTTTCCTTCTCCTTTTTTTT CTTCGCTAACTCCTCCCCTCTCGTGTGTCTCATCTCACTTTTTTTTTCGG TTCTTCCACTTTTTTTTTTTTTTTTTTTTTTTTCGTATCACACTTTTTTG TCCACCTGGTCGTCGTTGTCGTCGTCAGGGCAAGGCCTGGATCTCCCGAT CAACACGTTCTCTTGCACGGTGGGCCTGAAGCTGAGCCAGGCGAATTACT ACATCAAGAGCAGCCTTGCGGCGGCGGCGCTCTGTAAAGAGGTACGGCAG CAGTGCAAAAGGTCGTTCTATCGACGGTGCCCACTCCCCTTGTTTTGAGG CAGCCGGCGAGCAGGCAGGAGCGGGAGGGGATGGGGAGGACGCCAGAAGA GGACGGACAGGCGGTGGAATCTTTGATTGATCTGCCGCACGATCTCGCTC CGTGTCGGCCGGGCTGATGTCCCCCTTTCGGTGGGCGTGCTCTCCTCCCG TACATGGTAGGTTGAAGGTCCAGATGCCGCCGCCTCCGGCACGGGCGATC ATGTATTCCCCCCCCACACACACACACACAAACGTGCCCCGTCCCCGCGT CGTGGGTATGCGACGTCCATGGTCGCACGGCTACGGCACGGACGGTCACG GTTTATCTCCCCTCTGCACATACACAGCACTCGTACGGTAAAATACTGTC CACTTTTTCGCCTCGTTTCGTTGTCCAGCTGAGCCAGGTGAAGGACAAGG AGGAATACGGCAGCTACGAGGGCTACGAGGACGGGGGCTCGATGTTCGTC CAGCAGGGCTACGCGGTGGCCAACCAGCAGGGGGCGGCCAGGGCTCCCCC GCACACGTCCTCCGCCTCGAATATCGCAGACCTCGACATCGTGATGGGGT CACAGGTGCGGTGTCGGCCCTCTTGACCCCCCGCGTGTGTCAAGCTCGCG AGCAACGTGCAGGATGTTTATTCCCGCTCTTTGCTCCGATGTGCGTTTCA TTGGAAGCCACGTTGTTGCTGTGCTCTCGCAGTGGGCTCCCTGGCCCCAG CCAATTGATTCTAGATCCCAAAACTGTTGCCAAGAAGCTCTACTTCACAG TTTTTTGTTTTTCCGAGCGTGCCCCCCCCCTCCCCCCCCGGGGTCTGACA GGGACGTCATCTGTACTGGATACCGCAAAATGTTCCTTTACCGCCAGCTC GATTGTTTTTTCTTACCCCATAAAGAGGGCGCGAAATACCTCACAAAGGG CTGCGGCAATCGTGACGCTTTTCATGTGCGGCACCAAAAGTATTTCGTTT CAAGACACGTTTGCAGACCGGCGGACGTTCGGTGTCATCGTTCATAACGG GGTCCATTCATTTGACTTGAGGGTGTGTCGCAGAATGCTCACACTGCGAG AAGGTTGTATGTCTTACCTTGTTATTTCTGCGACCCTTGCAGAGAGCTAG TGGTGTGTGTGTAGCGCGTGTTGCTGATGCCGTGCTTGTGTCTGGTTGCT CTGCTTGGAGAGGGGTGGGGGGGGGCACCGCGGCTTAAGCTTTGGTGCGA AGGGCGCCGGTGATAAGGTGTGCAGGTGATCGCTTCGCCGGCCGAGTCCC GAGTCACGATATTTCGTTGTTTAGTGCATCAAATAAACTTCAAAGCATGC GTTCAAGACCGCCGATCTTCACGCGAGGCTCAGAGCAACGATTCTAGACC AGGGACAGGCATGAATTTGGGAAGTTTTCGCGGCATGGACGCCCCCCGTT CCTCGCGAGCACCCAGCACTGTCGTTGTTTTTTGGTCATGACCGACACAA TTTGACTATATTGATCGCCCCAAGACATCAAGCCGCTACTTTCCCATTTT AACCAATCCTAGTCTTTCGACGTGCTGGGCTCGCCCCACTTTTGAGACAT TTTTCGAGAAATTTCGCGATAATTTTTTCTCAAACTTGAATGCACCACCA CGAATCGATGTCCTGATTTGAAGTGCACCCCCGTTGCCCCCTCCCACCGC TTACCAACATCGTAAATTAAAAATTTTGCCCCTTGTGAAAAAAATCCTTC ACTCGAACAGTTCCCTGAAGACAGCGGAGGCGGCGGCGAGCGGTATCACC CCTCGGGCCGATCCTCCCGGCGGTCGCTCACCCCGTCCTTGAACTACAAC CAGATCTCCGCCGGTTGGGCCGACTTCGCCGAATCCATCGAGCCCAGCGG CGGTGGCGGTGGTGGCGGCACCGCCAATGACAGCGCCAGCGGCGGTGGCC GTAACGGCTTTCGAGGGCGGGATTTCGAGCTTCCGGGGGGTAGTGCGAAT GGAGGTCTTCCGGGGGTGTTCAGCGGGGGCAGGGAGAAGGGGAGGAAGAA GGAAGGCGCGGCGTTTCGGTCAGGCATCTTGAAGCACGTCAGAAGCGCTG GGTCGCTGTCGCTGGCGGCCTCCTCTTCCTCCTCCTCCTTCCCGAGCGGA GGCAACAAGTAGGCTTTGCCCCGGAGGACGAAAGGCGGCAGGAGGAACGT CCAGCGCTCACGCACGACAGCAGCAGCAGCAGCAGCAGCGGCATCAGCGG CAGCGTAAGTAGCGCTCGGGGCCAACCGACAGACCCACCGTAATGTTTCC GCGAGTGGCGAAAATTGTTTTGGGGTCACACGTCCTTTTCCCACTCCTCA TTTTGGATTTGTCCACTGTGTCGGGACTTGTGCCTACCAGGACCACGCGA AGCCTGCGTGTTTTCTTTGGCTGGGGTAGTGTGGTAGATTCCGTTCTTGG AAGGAAGCTGAGCGAGCGCGGCAAGACGGAGGAGGGTCGTAGATCATAGC GCTGTGGCATAGCGATGGCCAAAGCCACCGCGGTATATGTCTTTTGGTTG TGGAGAGGTGGGGGAGGCTGGGGTGGCATCTCGCACAGCCAGGCTAGAAA CCTTCCCGCAGCCATCTCGGTTGCTAGGTTGATTACGTTTCGAAGACCCG GGGCGTGGAAAAGTCAGTGTCCGAGCCCCTTGCCTTCCACACTTGGTATT ACTCCTGACGTCTTGACTCATTTGGCGCTGAAAAAGTTGAATGGGTCCCA AGCGCCTTCCTGACAGCGGAGCGAAACCATTCGCGCTCTTTTTCGATCTC GTATTCGGGGGGGGGCGATTGTATTTGTGGACGGTTGACGGAGGAGTCGG GAGCGGTGGCCTCTCGAGAGGTACACGCGTGCGAGTCCGATGTTGTCGTA CTTGTAGGGCCCCTTTGCAGACGGTAGCCTAGGCAGGTTTTGGTTTGAGT AAACATATGGGATAAAGTGTTGGATTCGTGTTTTTTGGGGGGGGCTGGGA TTGTGTACGTGTTAGATCCCATCCCCCCCACCTGTCATTTGATTGAACAC ACTTTTTTACTTTGCGTGGGCGGTCTTTTGCGGGGCGATTAGTTGTGGCG ATTTCGATTCCCGACCGGGTGAAGGGCGAGGAGAGGAAATTGAGTAGAGT TGGCAAGCTATACGGCCCGGCCCGCCCTCTAGGTTTATCCTGCGGCCGCG AACGCTAAAATTCGCACCGCACGCAGATGACGCTTTAGTCTAGCACGCCA CGGGATGTTTCCCATCCTAAGAAAAAGGGCGCGCTCGCCTTCGTCTTGTT GTGCATTTTCATTTCCGCTGCTGCTGTGTCGTGACTTCGAGTCTGGAGAT CTTTCGTTCGTTGAAAGTGCGTTGCAATGCACCCCTCCCCACCCCCTCTC CCTCCCCCGTTCTGTGTACCGTACTTGCACGCACGCGCGATTTGTTTTTA TCCGCCACTACGTGCAAAGTTTTCAGCGAATTCTTGTTACTTCGCTTTCA CGCTTTCGTACACGGGGGGAAAGTTTTGTCACGGGTTAGGCAGAGTGGAA GAGGGCACCCACCGATTTTGAACCAACGATTTTGAGCCCTCTGCATTTCA GCTTTTTTCGAGAGTGCAGCGGTAGCGCACCAATCCGCGCATAACGGAGA GCTTTGGCGTACACGCCCAAACGCGTGACTAAGAACGAACACCAACTTAG GAAAATATCT
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig8:1107781..1117140-

>mRNA_P-fluviatile_contig8.14402.1 ID=mRNA_P-fluviatile_contig8.14402.1|Name=mRNA_P-fluviatile_contig8.14402.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4968bp|location=Sequence derived from alignment at P-fluviatile_contig8:1107781..1117140- (Porterinema fluviatile SAG_2381)
ATGCCGGAATTGCGGCTCGGCGGCGGCGGCGGCGGCGCTGGTACCGATGC
CGTGGGATCCCGTGCTTCCTTCACCTTGCCATTGGCGAGGGCTGCGGAAG
AGCCCGGCGGTCCGTTCGGCGGGTTACCAGCAGGTGGAACAAGAGTTTTG
TCGGCACCCGCTACCATCGGCGGCGGCAAACTTACTGCTAGAACGGGCAG
CGTCGGATCTGCGAGCGGCGGCGGCGGCGGTGGCGGCGGTGGCGGCGCCG
CCGGCCGCGGAGGTCTTATGCCGAGGAAGGAACGACGTCTGGACATCTTG
GGGCAGAATAGGTTCACCCCTAGGAAAGACTACCCGCCCTCATCGATGTT
ATTTCAGATGCCGGAATTGCGGCTCGGCGGCGGCGGCGGCGGCGCTGGTA
CCGATGCCGTGGGATCCCGTGCTTCCTTCACCTTGCCATTGGCGAGGGCT
GCGGAAGAGCCCGGCGGTCCGTTCGGCGGGTTACCAGCAGGTGGAACAAG
AGTTTTGTCGGCACCCGCTACCATCGGCGGCGGCAAACTTACTGCTAGAA
CGGGCAGCGTCGGATCTGCGAGCGGCGGCGGCGGCGGTGGCGGCGGTGGC
GGCGCCGCCGGCCGCGGAGGTCTTATGCCGAGGAAGGAACGACGTCTGGA
CATCTTGGGGCAGAATAGGTTCACCCCTAGGAAAGACTACCCGCCCTCAT
CGATGTTATTTCAGGCTATGCGCTTCCACTACGGGAACGACTACAGCTCG
AGGGACCTTCCTGACACTCCCGCCGCTTGTTGGGCTTTAGTGTTCAGCGC
TCAGGCTATGCGCTTCCACTACGGGAACGACTACAGCTCGAGGGACCTTC
CTGACACTCCCGCCGCTTGTTGGGCTTTAGTGTTCAGCGCTCAGGAGTCT
CGGAGAGGGGCGGCGCGAAAATTCTCGTCGGCGAACTACATCGCAGAAGA
GCCACCGGCCTACGACGTGGAGGAGTCTCGGAGAGGGGCGGCGCGAAAAT
TCTCGTCGGCGAACTACATCGCAGAAGAGCCACCGGCCTACGACGTGGAG
TCGACGAGGGCACCTCTCGACACTTCCTCCACCGGCACACAGCCGATAAT
CAGAACGCACAGTAGTGAGGTAAACATGGGTGTAGCAGGGGCAACATCAG
GGGGAGAAGGAGAAAGAGGAGGCGTGGGGGGGGCGGCGGGATTCCGCCCG
ACAAGCGCGGGGTTTGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTGCGGG
GACTCAAAACTCCTCTAGACCGAGGTCGCTGCCGATTGGATCTCGACGGG
GCATTGTCGGGGGCGGGGACGACGGCAGCAACTCGATGGCCCTTCTCAAA
AACACGCTTCTGAGCGGCCACCGCGGCAGGAGAAACGCCGAAGGGAGCAG
CAGAGCGGGCCTCGGCAGCAGCTCGAGCGGTGTTTCCCCCGCCACTTCTG
GTGCTGGCGGCGGCAGCGGTGGTTCTGAATTGGAAGCGGCGGCGGGTGAG
GAAACGTCACCGAAGCAGGAGCGTGACGGAGGGGGATCGGCAGTTGATGG
CCGCGGTGGCCGCGGCGGTATCGGCCTGTGGAGCGGCGGTCAGGTCTCGC
CGGCAGGGATGTCCTCTGACGGCGCCTTGTCATCCTCCTCTCCCGCGGTA
ACAGGTGGGCGCTACAACCCCCCCCGCTCTAGCCGAAACAGGGAGTCATC
GGGCGCCTCCTTGTCCTCGGCCACGTCTATCGAATGGGGAGGCAGGCCGC
CGCTGAAGGAGGAAGAAGGCGAGGACGACGACGACGACGACGATGACGAC
GAGTGCGCTGCGGCTGCGGCTGCTGCGGCGGCTATGGCGGCAGCGGACGC
GGCAGCGGGCGGCACCAGCGGCGAGAGTCCCGACGGAGGCGGCGGCGGCA
CCGTGACGCGATCAGGAGGCAGCGCTTTGGAGCATTCGGCTGCTGCATCT
TCTTCCGCTTCTCTTTCTGCCGGCGAACGTCCCTCGTCGCAGCAGACGAC
GACGGCGGCGGCGGCGGCGGCGGCGGGGCTGGCGTCGGGCGTGTGGGGGG
CGAACGACCCGTACGTGTTGAGCGCCAGCGACCTCCCGGGCCAGCAGAAA
GGATACGTCGACGAGGGCACCTCTCGACACTTCCTCCACCGGCACACAGC
CGATAATCAGAACGCACAGTAGTGAGGTAAACATGGGTGTAGCAGGGGCA
ACATCAGGGGGAGAAGGAGAAAGAGGAGGCGTGGGGGGGGCGGCGGGATT
CCGCCCGACAAGCGCGGGGTTTGCCGCCGCCGCCGCCGCCGCCGCCGCCG
CTGCGGGGACTCAAAACTCCTCTAGACCGAGGTCGCTGCCGATTGGATCT
CGACGGGGCATTGTCGGGGGCGGGGACGACGGCAGCAACTCGATGGCCCT
TCTCAAAAACACGCTTCTGAGCGGCCACCGCGGCAGGAGAAACGCCGAAG
GGAGCAGCAGAGCGGGCCTCGGCAGCAGCTCGAGCGGTGTTTCCCCCGCC
ACTTCTGGTGCTGGCGGCGGCAGCGGTGGTTCTGAATTGGAAGCGGCGGC
GGGTGAGGAAACGTCACCGAAGCAGGAGCGTGACGGAGGGGGATCGGCAG
TTGATGGCCGCGGTGGCCGCGGCGGTATCGGCCTGTGGAGCGGCGGTCAG
GTCTCGCCGGCAGGGATGTCCTCTGACGGCGCCTTGTCATCCTCCTCTCC
CGCGGTAACAGGTGGGCGCTACAACCCCCCCCGCTCTAGCCGAAACAGGG
AGTCATCGGGCGCCTCCTTGTCCTCGGCCACGTCTATCGAATGGGGAGGC
AGGCCGCCGCTGAAGGAGGAAGAAGGCGAGGACGACGACGACGACGACGA
TGACGACGAGTGCGCTGCGGCTGCGGCTGCTGCGGCGGCTATGGCGGCAG
CGGACGCGGCAGCGGGCGGCACCAGCGGCGAGAGTCCCGACGGAGGCGGC
GGCGGCACCGTGACGCGATCAGGAGGCAGCGCTTTGGAGCATTCGGCTGC
TGCATCTTCTTCCGCTTCTCTTTCTGCCGGCGAACGTCCCTCGTCGCAGC
AGACGACGACGGCGGCGGCGGCGGCGGCGGCGGGGCTGGCGTCGGGCGTG
TGGGGGGCGAACGACCCGTACGTGTTGAGCGCCAGCGACCTCCCGGGCCA
GCAGAAAGGATACGTCGGCGCCGAGCCACGGCAGCGGGAAGCGGAGGAGC
GAGGCCGGGGACGGGGCGACTCCCCAAACCGTTCTCCGGGTGCCGGCGGC
CGCGGCGGCCGCGGCGGCGGAGAATCATCGGGAACGGCGGTGGGCGGCGG
TGGAGGTCGGGAGGGCTTCGAGAAGATCCGGACGAGAAGCCGGTCGCACT
CGATGCACATGACCGATTTGGGCGTCGGCGCCGAGCCACGGCAGCGGGAA
GCGGAGGAGCGAGGCCGGGGACGGGGCGACTCCCCAAACCGTTCTCCGGG
TGCCGGCGGCCGCGGCGGCCGCGGCGGCGGAGAATCATCGGGAACGGCGG
TGGGCGGCGGTGGAGGTCGGGAGGGCTTCGAGAAGATCCGGACGAGAAGC
CGGTCGCACTCGATGCACATGACCGATTTGGGCGGGCAAGGCCTGGATCT
CCCGATCAACACGTTCTCTTGCACGGTGGGCCTGAAGCTGAGCCAGGCGA
ATTACTACATCAAGAGCAGCCTTGCGGCGGCGGCGCTCTGTAAAGAGGGC
AAGGCCTGGATCTCCCGATCAACACGTTCTCTTGCACGGTGGGCCTGAAG
CTGAGCCAGGCGAATTACTACATCAAGAGCAGCCTTGCGGCGGCGGCGCT
CTGTAAAGAGCTGAGCCAGGTGAAGGACAAGGAGGAATACGGCAGCTACG
AGGGCTACGAGGACGGGGGCTCGATGTTCGTCCAGCAGGGCTACGCGGTG
GCCAACCAGCAGGGGGCGGCCAGGGCTCCCCCGCACACGTCCTCCGCCTC
GAATATCGCAGACCTCGACATCGTGATGGGGTCACAGCTGAGCCAGGTGA
AGGACAAGGAGGAATACGGCAGCTACGAGGGCTACGAGGACGGGGGCTCG
ATGTTCGTCCAGCAGGGCTACGCGGTGGCCAACCAGCAGGGGGCGGCCAG
GGCTCCCCCGCACACGTCCTCCGCCTCGAATATCGCAGACCTCGACATCG
TGATGGGGTCACAGTTCCCTGAAGACAGCGGAGGCGGCGGCGAGCGGTAT
CACCCCTCGGGCCGATCCTCCCGGCGGTCGCTCACCCCGTCCTTGAACTA
CAACCAGATCTCCGCCGGTTGGGCCGACTTCGCCGAATCCATCGAGCCCA
GCGGCGGTGGCGGTGGTGGCGGCACCGCCAATGACAGCGCCAGCGGCGGT
GGCCGTAACGGCTTTCGAGGGCGGGATTTCGAGCTTCCGGGGGGTAGTGC
GAATGGAGGTCTTCCGGGGGTGTTCAGCGGGGGCAGGGAGAAGGGGAGGA
AGAAGGAAGGCGCGGCGTTTCGGTCAGGCATCTTGAAGCACGTCAGAAGC
GCTGGGTCGCTGTCGCTGGCGGCCTCCTCTTCCTCCTCCTCCTTCCCGAG
CGGAGGCAACAAGTAGTTCCCTGAAGACAGCGGAGGCGGCGGCGAGCGGT
ATCACCCCTCGGGCCGATCCTCCCGGCGGTCGCTCACCCCGTCCTTGAAC
TACAACCAGATCTCCGCCGGTTGGGCCGACTTCGCCGAATCCATCGAGCC
CAGCGGCGGTGGCGGTGGTGGCGGCACCGCCAATGACAGCGCCAGCGGCG
GTGGCCGTAACGGCTTTCGAGGGCGGGATTTCGAGCTTCCGGGGGGTAGT
GCGAATGGAGGTCTTCCGGGGGTGTTCAGCGGGGGCAGGGAGAAGGGGAG
GAAGAAGGAAGGCGCGGCGTTTCGGTCAGGCATCTTGAAGCACGTCAGAA
GCGCTGGGTCGCTGTCGCTGGCGGCCTCCTCTTCCTCCTCCTCCTTCCCG
AGCGGAGGCAACAAGTAG
back to top