mRNA_P-fluviatile_contig8.14401.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14401.1 vs. uniprot
Match: A0A6H5JMR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR4_9PHAE) HSP 1 Score: 331 bits (849), Expect = 4.500e-105 Identity = 190/269 (70.63%), Postives = 211/269 (78.44%), Query Frame = 1
Query: 169 RWGLIPSFTKRSDKPDFFRMFNARSETAADKPSFRRLVGRRHGVVAFSGFYEWKQDDKGERQPYYFHYSDNRPLLFAVLYDTWQQGDRF-----DGGXXXXXXXXXXXXXXXXXXXSKPATPGGEAKEERGRGQEQGHKKWEEEKERREGGEADMQMELLKREVEEEDRGESLLFSYAVLTTSAAPRLAWLHDRMPVILNGAQEAAAWLSCKGGEASTFLKNHRPYGGDDLVWHPVSKQMNTMWYDGDDCSAAIELKKPSKPLPAITSF 960
RWGL+PSFTK+ DKPDFFRMFNARSETAA+KPSFRRLVGRRHGVVAF+GFYEWK+D+KGERQPYYFHY+D+RPLL AVLYDTWQQG +GGXXXXXXXXXXXXXXXXXXX G + G Q LL+REVEEEDRG SL+FSYAVLTT AAPRL WLH+RMPVIL G+Q+AAAW+SCKG EAS FLKNH PY G+DLVWHPVSKQMNTM YD +DCSAAIELK+P+KPLPAIT+F
Sbjct: 59 RWGLVPSFTKKGDKPDFFRMFNARSETAAEKPSFRRLVGRRHGVVAFTGFYEWKRDEKGERQPYYFHYADDRPLLLAVLYDTWQQGGDAIRGYGNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGEXE----------GRLRGQAALLEREVEEEDRGGSLMFSYAVLTTKAAPRLEWLHERMPVILRGSQDAAAWMSCKGQEASKFLKNHTPYSGEDLVWHPVSKQMNTMRYDAEDCSAAIELKEPAKPLPAITTF 317
BLAST of mRNA_P-fluviatile_contig8.14401.1 vs. uniprot
Match: D7G2K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K0_ECTSI) HSP 1 Score: 247 bits (631), Expect = 1.760e-76 Identity = 148/225 (65.78%), Postives = 163/225 (72.44%), Query Frame = 1
Query: 169 RWGLIPSFTKRSDKPDFFRMFNARSETAADKPSFRRLVGRRHGVVAFSGFYEWKQDDKGERQPYYFHYSDNRPLLFAVLYDTWQQGDRF-----DGGXXXXXXXXXXXXXXXXXXXSKPATPGGEAKEERGRGQEQGHKKWEEEKERREGGEADM----------QMELLKREVEEEDRGESLLFSYAVLTTSAAPRLAWLHDRMPVILNGAQEAAAWLSCKGGE 798
RWGL+PSFTK+ DKPDFFRMFNARSETAA+KPSFRRLVGRRHGVVAF+GFYEWK+D+KGERQPYYFHY+D+RPLLFAVLYDTWQQG +GGXXXXXXXXXXXXXXX T GG GG AD+ Q LL+REVEEEDRG SL+FSYAVLTT AAPRL WLH+RMPVIL GAQ+AAAW+ CKG E
Sbjct: 2 RWGLVPSFTKKGDKPDFFRMFNARSETAAEKPSFRRLVGRRHGVVAFTGFYEWKRDEKGERQPYYFHYADDRPLLFAVLYDTWQQGGDAIQGYGNGGXXXXXXXXXXXXXXXIGDGKAVPTTGGR------------------------GGHADLAGEGEGGLRGQAALLEREVEEEDRGGSLMFSYAVLTTKAAPRLEWLHERMPVILRGAQDAAAWMRCKGQE 202
BLAST of mRNA_P-fluviatile_contig8.14401.1 vs. uniprot
Match: A0A835Z2X9_9STRA (DUF159-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2X9_9STRA) HSP 1 Score: 209 bits (531), Expect = 8.350e-61 Identity = 119/317 (37.54%), Postives = 162/317 (51.10%), Query Frame = 1
Query: 10 VEPQALAAAVGFSGNVPLRRASHYRRRENAHPGNAAPIAYRTST----------GGSALRTMRR----WGLIPSFTKRSDKPDFFRMFNARSETAADKPSFRRLVGRRHGVVAFSGFYEWKQDDKGERQPYYFHYSDNRPLLFAVLYDTWQQGDRFDGGXXXXXXXXXXXXXXXXXXXSKPATPGGEAKEERGRGQEQGHKKWEEEKERREGGEADMQMELLKREVEEEDRGESLLFSYAVLTTSAAPRLAWLHDRMPVILNGAQEAAAWLSCKGGEASTFLKNHRPYGGDDLVWHPVSKQMNTMWYDGDDCSAAIE 918
VEPQA+A A G GNVP RR + +R N HPG P+ Y GGS + + WGL+PSF+K DKP+FFRMFNARSET K F+RL+ +R VVAF GFYEWK+D GE+QPY+ HY D RP+L A LYD ++ F+ +P+ + EED + L +++ +LTT ++PRLAWLHDRMP +++ A+ A WL G +A++ L + P D+VWHPVSK+MN++ Y G+DC +E
Sbjct: 9 VEPQAVARATGLPGNVPTRRTARFRPSCNVHPGQNVPVLYHAYAPEQQQEQEKGGGSGHQDLEVASMVWGLVPSFSKPEDKPNFFRMFNARSETVNSKSIFKRLMAKRRAVVAFDGFYEWKKDAAGEKQPYFIHYEDGRPMLMAALYDRARRPTAFE----------------------RPS------------------------------------------DAPEEDDPDHL-YTFTILTTDSSPRLAWLHDRMPAVIS-AEAARRWLHA-GVDAASALSSIAPNDSADIVWHPVSKRMNSVKYQGEDCMEPVE 258
BLAST of mRNA_P-fluviatile_contig8.14401.1 vs. uniprot
Match: A0A2P6PTZ5_ROSCH (Putative SOS response associated peptidase (SRAP) n=2 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6PTZ5_ROSCH) HSP 1 Score: 177 bits (448), Expect = 5.940e-48 Identity = 106/300 (35.33%), Postives = 146/300 (48.67%), Query Frame = 1
Query: 79 YRRRENAHPGNAAPIAYRTSTG-----GSALRTMRRWGLIPSFTKRSDKPDFFRMFNARSETAADKPSFRRLVGRRHGVVAFSGFYEWKQDDKGERQPYYFHYSDNRPLLFAVLYDTWQQGDRFDGGXXXXXXXXXXXXXXXXXXXSKPATPGGEAKEERGRGQEQGHKKWEEEKERREGGEADMQMELLKREVEEEDRGESLLFSYAVLTTSAAPRLAWLHDRMPVILNGAQEAAAWLSCKGGEASTFLKNHRPYGGDDLVWHPVSKQMNTMWYDGDDCSAAIELKKPSKPLPAITSFF 963
YR N PG P+ R +G G+ L M+ WGLIPSFTK+++KPD +RMFNARSE+ +K SFRRLV + +VA GFYEWK+D ++QPYY H+ D RPLLFA LYD+W+ + GE L +++ ++TTS++ LAWLHDRMPVIL + WL+ +S F K +PY G DLVW+PV+ M + ++G +CS I+LK ++ +IT FF
Sbjct: 50 YRPSYNVSPGADLPVVRRGDSGSDGEDGAVLHCMK-WGLIPSFTKKTEKPDHYRMFNARSESICEKASFRRLVPKNRCLVAVEGFYEWKKDGS-KKQPYYVHFKDGRPLLFAALYDSWENSE-----------------------------------------------------------------------------GEKL-YTFTIITTSSSSALAWLHDRMPVILGDKESIDTWLN--DSSSSNFDKLLKPYEGSDLVWYPVTPAMGKVSFNGPECSNEIQLK--TEGTNSITKFF 265
BLAST of mRNA_P-fluviatile_contig8.14401.1 vs. uniprot
Match: A0A5N5I941_9ROSA (Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein-like n=2 Tax=Pyrus TaxID=3766 RepID=A0A5N5I941_9ROSA) HSP 1 Score: 179 bits (454), Expect = 3.790e-46 Identity = 112/318 (35.22%), Postives = 158/318 (49.69%), Query Frame = 1
Query: 52 NVPLRRAS--HYRRRENAHPGNAAPIAYRT--STGGSALRTMRRWGLIPSFTKRSDKPDFFRMFNARSETAADKPSFRRLVGRRHGVVAFSGFYEWKQDDKGERQPYYFHYSDNRPLLFAVLYDTWQQGDRFDGGXXXXXXXXXXXXXXXXXXXSKPATPGGEAKEERGRGQEQGHKKWEEEKERREGGEADMQMELLKREVE----------EEDRGESLLFSYAVLTTSAAPRLAWLHDRMPVILNGAQEAAAWLSCKGGEASTFLKNHRPYGGDDLVWHPVSKQMNTMWYDGDDCSAAIELKKPSKPLPAITSFF 963
+ P+R + YR N PG+ P+ R + G + +WGLIPSFTK+++KPDF+RMFNARSE+ +K SFRRLV + +VA GFYEWK+D ++QPYY H+ D+RPLLFA LYD+W+ + D SKP E + + ++K +V GE L +++ ++TTS++ L WLHDRMPVIL + WL G +S F +PY G DLVW+PV+ M + +DG +C I+LK +IT FF
Sbjct: 22 HAPVRAVNMDRYRPSYNVSPGSNLPVVRREDGADGDGVVLQCMKWGLIPSFTKKTEKPDFYRMFNARSESICEKASFRRLVPKSRCIVAVEGFYEWKKDGS-KKQPYYVHFKDSRPLLFAALYDSWENSEGDDN------------------LFSKPTL-----------------------------SEISLSV-IVKFKVSLFLGADISNVRYPAGEKL-YTFTIITTSSSSALGWLHDRMPVILGDKESTDTWLD--GSSSSNFDSLLKPYEGPDLVWYPVTPAMGKVSFDGPECINEIQLKTEGNN--SITKFF 285
BLAST of mRNA_P-fluviatile_contig8.14401.1 vs. uniprot
Match: A0A166JFJ3_DAUCS (Uncharacterized protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166JFJ3_DAUCS) HSP 1 Score: 171 bits (434), Expect = 1.000e-43 Identity = 105/309 (33.98%), Postives = 147/309 (47.57%), Query Frame = 1
Query: 58 PLRR--ASHYRRRENAHPGNAAPIAYR---TSTGGSALRTMRRWGLIPSFTKRSDKPDFFRMFNARSETAADKPSFRRLVGRRHGVVAFSGFYEWKQDDKGERQPYYFHYSDNRPLLFAVLYDTWQQGDRFDGGXXXXXXXXXXXXXXXXXXXSKPATPGGEAKEERGRGQEQGHKKWEEEKERREGGEADMQMELLKREVEEEDRGESLLFSYAVLTTSAAPRLAWLHDRMPVILNGAQEAAAWLSCKGGEASTFLKNHRPYGGDDLVWHPVSKQMNTMWYDGDDCSAAIELKKPSKPLPAITSFFKR 969
PLR + YR N PG+ P+ R T++ G A+ M+ WGLIPSFT +++KPD ++MFNARSE+ +K SFRRLV +V GFYEWK+D ++QPYY H+ D RP++FA LYD+W+ + GE +L+++ +LTTS++ LAWLHDRMPVIL WL G +S F +PY DL+W+PV+ MN YDG +C I+LK + + I+SFF +
Sbjct: 203 PLRSIDTNRYRPAYNVAPGSTLPVIRRDNGTNSQGVAIHCMK-WGLIPSFTNKAEKPDHYKMFNARSESVTEKASFRRLVPGSRCLVTVEGFYEWKKDG-AKKQPYYIHFKDGRPMVFAALYDSWKNAE-----------------------------------------------------------------------------GE-VLYTFTILTTSSSSALAWLHDRMPVILGKTGSTEEWLD--GSSSSKFNTVLKPYEEPDLIWYPVTSAMNKPSYDGPECIKEIQLK--TDEMKPISSFFSK 427
BLAST of mRNA_P-fluviatile_contig8.14401.1 vs. uniprot
Match: A0A087SK81_AUXPR (UPF0361 protein yoqW n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SK81_AUXPR) HSP 1 Score: 165 bits (417), Expect = 8.440e-43 Identity = 104/306 (33.99%), Postives = 142/306 (46.41%), Query Frame = 1
Query: 94 NAHPGNAAPIAYRTSTG-GSALRTMRRWGLIPSFTKRSDKPDFFRMFNARSETAADKPSFRRLVGRRHGVVAFSGFYEWKQDDKGERQPYYFHYSDNRPLLFAVLYDTWQQGDRFDGGXXXXXXXXXXXXXXXXXXXSKPATPGGEAKEERGRGQEQGHKKWEEEKERREGGEADMQMELLKREVEEEDRGESLLFSYAVLTTSAAPRLAWLHDRMPVILNGAQEAAAWLSCKGGE--ASTFLKNHRPYGGDDLVWHPVSKQMNTMWYDGDDCSAAIELKKPSKPLPAITSFFKRMDQAVGNTGSS 1002
NA PG R + G G + TMR WGL+PS+TK + PDF+RMFNARSET A+KP+F+RL+ R+ +V +GFYEWK++ + +QPYY H+ RP++ A L+DTWQ E + +Y +LTT + PRL WLHDRMPVIL+ WL G+ A T+ PY G+DLVWHPV+ +M + G +C A ELK+P+ IT FF++ A T S+
Sbjct: 34 NAAPGATRSPVVRVAQGMGREICTMR-WGLVPSYTKPDELPDFWRMFNARSETLAEKPTFQRLLSRQRCLVPVAGFYEWKKEVRSAKQPYYVHFEGGRPMVMAGLWDTWQAQ-------------------------------------------------------------------------------EGPMSTYTILTTDSGPRLGWLHDRMPVILDTKDSQDLWLLDGPGDPKAGTWSAVCGPYIGEDLVWHPVTPEMGSPKLQGPECCA--ELKRPT-----ITQFFEKKSGAKRKTDST 252
BLAST of mRNA_P-fluviatile_contig8.14401.1 vs. uniprot
Match: A0A2H5PEL6_CITUN (Uncharacterized protein n=4 Tax=Citrus TaxID=2706 RepID=A0A2H5PEL6_CITUN) HSP 1 Score: 159 bits (403), Expect = 2.290e-40 Identity = 100/315 (31.75%), Postives = 139/315 (44.13%), Query Frame = 1
Query: 79 YRRRENAHPGNAAPIAYRTSTGGSALRTMRRWGLIPSFTKRSDKPDFFRMFNARSETAADKPSFRRLVGRRHGVVAFSG------------------FYEWKQDDKGERQPYYFHYSDNRPLLFAVLYDTWQQGDRFDGGXXXXXXXXXXXXXXXXXXXSKPATPGGEAKEERGRGQEQGHKKWEEEKERREGGEADMQMELLKREVEEEDRGESLLFSYAVLTTSAAPRLAWLHDRMPVILNGAQEAAAWLSCKGGEASTFLKNHRPYGGDDLVWHPVSKQMNTMWYDGDDCSAAIELKKPSKPLPAITSFFKR 969
YR N PG P+ R G + +WGLIPSFTK+++KPDF++MFNARSE+ +K SFRRL+ + + A G FYEWK+D ++QPYY H+ D RPL+FA LYDTWQ + GE +L+++ +LTTS++ L WLHDRMPVIL + + AWL+ G +S + +PY DLVW+PV+ M + ++G +C I LK K P F K+
Sbjct: 33 YRPSYNVAPGWNLPVVRRDDDGEGFVLHCMKWGLIPSFTKKNEKPDFYKMFNARSESVTEKASFRRLLPKSRCLAAVEGYLCSLMFRALLDFNLLLRFYEWKKDGS-KKQPYYVHFKDGRPLVFAALYDTWQSSE-----------------------------------------------------------------------------GE-ILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLN--GSSSSKYDTILKPYEESDLVWYPVTPVMGKLSFNGPECIKEIPLKTEGKN-PISNFFLKK 265
BLAST of mRNA_P-fluviatile_contig8.14401.1 vs. uniprot
Match: UPI001C27AD40 (abasic site processing protein HMCES-like isoform X1 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27AD40) HSP 1 Score: 154 bits (390), Expect = 2.010e-38 Identity = 97/325 (29.85%), Postives = 147/325 (45.23%), Query Frame = 1
Query: 1 RQTVEPQALAAAVGFSGNVPLR-RASHYRRRENAHPGNAAPIAYRTSTGGSALRT-MRRWGLIPSFTKRSDKPDFFRMFNARSETAADKPSFRRLVGRRHGVVAFSGFYEWKQDDKGERQPYYFHYSDNRPLLFAVLYDTWQQGDRFDGGXXXXXXXXXXXXXXXXXXXSKPATPGGEAKEERGRGQEQGHKKWEEEKERREGGEADMQMELLKREVEEEDRGESLLFSYAVLTTSAAPRLAWLHDRMPVILNGAQEAAAWLSCKGGEASTFLKNHRPYGGDDLVWHPVSKQMNTMWYDGDDCSAAIELKKPSKPLPAITSFFKR 969
R T+ +A A F+ L YR N PG P+ GG + + +WGL+PSFTK++DK D F+MFNAR E+ +K SFRRL+ + +V+F GFYEWK+D ++QPYY H+ D+RP++FA L+D+W+ + G S T V L+++ ++TTS++ L WLHDRMPVIL + WL+ S K +PY DL W+PV+ + + +DG +C ++L++ I+ FF +
Sbjct: 9 RCTLRADGIAQACHFNSRPILHVHMDRYRPSYNVAPGFNVPVVRLDDGGGDCVVSHCMKWGLVPSFTKKTDKVDHFKMFNARCESIREKASFRRLLPKNRCLVSFEGFYEWKKDGS-KKQPYYVHFKDDRPMVFAALFDSWKNSE----GEIHINEEHVHKTTTNALLLSHFCT------------------------------------------VFPIHYSGETLYTFTIITTSSSSSLEWLHDRMPVILGSKESTDWWLN--DSSLSNLDKILKPYEETDLAWYPVTPAVGKISFDGPECIKEVKLEETK----TISQFFSK 280
BLAST of mRNA_P-fluviatile_contig8.14401.1 vs. uniprot
Match: W7T5J7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T5J7_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.020e-37 Identity = 113/357 (31.65%), Postives = 150/357 (42.02%), Query Frame = 1
Query: 22 ALAAAVGFSGNVPLRRASHYRRRENAHPGNAAPIAYRT---------------STGGSALRT--------------------MRRWGLIPSFTKRSDKPDFFRMFNARSETAADKPSFRRLVGRRHGVVAFSGFYEWKQDDKGERQPYYFHYSD-NRPLL-FAVLYDTWQQGDRFDGGXXXXXXXXXXXXXXXXXXXSKPATPGGEAKEERGRGQEQGHKKWEEEKERREGGEADMQMELLKREVEEEDRGESLLFSYAVLTTSAAPRLAWLHDRMPVILNGAQEAAAWLSCKGGEASTFLKNHRP------------YGG---DDLVWHPVSKQMNTMWYDGDDCSAAIELKKPSK 936
A+A G G + RA +R R N HPG+ +P+ R + GG +T + WGLIPS+ K +K DFFR FNARSET A KP FRRL + +V GFYEWK+D KG++QP+Y H D + PLL A LYD W + R D E ++ VE+E + FS+ +LTT AA AWLHDRMP+IL +E AWL G E + P GG +L+ PVSK+MN+M Y+G+DC+ I L++ K
Sbjct: 13 AVATTYGVPGGR-IYRADRFRPRHNLHPGHTSPVIVRAGGYERHCRRQPTTGKAKGGDTSQTRDACQEKKGEDGDLGERAVVVMHWGLIPSWHKEGEKLDFFRAFNARSETVAVKPMFRRLADTKRCLVCVEGFYEWKKDKKGQKQPFYCHSRDPSHPLLSLAGLYDVWYRPPRSD--------------------------------------------------------------EKVEGAVEDE-----VFFSFTILTTEAASSFAWLHDRMPLILQSKEEEEAWLE-GGAEGGPRIAEILPKLWGQKGEGKGKQGGREVPELICEPVSKRMNSMAYEGEDCAVPIVLEEEGK 300 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14401.1 >prot_P-fluviatile_contig8.14401.1 ID=prot_P-fluviatile_contig8.14401.1|Name=mRNA_P-fluviatile_contig8.14401.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=485bp RQTVEPQALAAAVGFSGNVPLRRASHYRRRENAHPGNAAPIAYRTSTGGSback to top mRNA from alignment at P-fluviatile_contig8:1100831..1107271+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14401.1 ID=mRNA_P-fluviatile_contig8.14401.1|Name=mRNA_P-fluviatile_contig8.14401.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6441bp|location=Sequence derived from alignment at P-fluviatile_contig8:1100831..1107271+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:1100831..1107271+ >mRNA_P-fluviatile_contig8.14401.1 ID=mRNA_P-fluviatile_contig8.14401.1|Name=mRNA_P-fluviatile_contig8.14401.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2910bp|location=Sequence derived from alignment at P-fluviatile_contig8:1100831..1107271+ (Porterinema fluviatile SAG_2381)back to top |