mRNA_P-fluviatile_contig8.14399.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14399.1 vs. uniprot
Match: A0A6H5JIN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN5_9PHAE) HSP 1 Score: 211 bits (537), Expect = 4.960e-64 Identity = 125/185 (67.57%), Postives = 138/185 (74.59%), Query Frame = 2
Query: 41 LREVATIAVSAILCCSNGRCYVSAFAFTSPLR-SPSFQRQSPISTLRTQLHQQPQPQPQQLRVLGTTGRCK---HVTGAVAARGMSMAQETLILTEENVITVLAEAKRELSTLFGNNAENTAVGITGDCEFVCLDGPSVVVRLTGRFWHEKAVVLARVANFVQTRIPECVDVEIEDPAQLEDADP 583
LR VA +A + LCCS+ RC SAFAFT+ L S + RQS S+ + +Q R L T R + H+ V RG+ MAQETLILTEENV+ VLAEAKRELSTLFGNNAENTAVGITGDCEFVCLDGPSVVVRLTGRFWHEK VLARV NFVQTRIPECVDVEIEDP+QLEDADP
Sbjct: 11 LRVVAVVAAALALCCSS-RC--SAFAFTARLSPSTAVLRQSHSSSSSRCSGSWDRRVQEQFRALDTRSRGRSETHLANGVG-RGLYMAQETLILTEENVVAVLAEAKRELSTLFGNNAENTAVGITGDCEFVCLDGPSVVVRLTGRFWHEKTTVLARVGNFVQTRIPECVDVEIEDPSQLEDADP 191
BLAST of mRNA_P-fluviatile_contig8.14399.1 vs. uniprot
Match: D7G2J7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2J7_ECTSI) HSP 1 Score: 191 bits (485), Expect = 1.660e-57 Identity = 96/104 (92.31%), Postives = 98/104 (94.23%), Query Frame = 2
Query: 287 MAQETLILTEENVITVLAEAKRELSTLFGNNAENTAVGITGDCEFVCLDGPSVVVRLTGRFWHEKAVVLARVANFVQTRIPECVDVEIEDPAQLEDADP-QGRG 595
MAQETLILTEENV+ VLAEAKRELSTLFGNNAENTAVGITGDCEFVCLDGPSVVVRLTGRFWHEK VLARV NFVQTRIPECVDVEIEDP+QLEDADP QG G
Sbjct: 1 MAQETLILTEENVVAVLAEAKRELSTLFGNNAENTAVGITGDCEFVCLDGPSVVVRLTGRFWHEKTTVLARVGNFVQTRIPECVDVEIEDPSQLEDADPPQGPG 104
BLAST of mRNA_P-fluviatile_contig8.14399.1 vs. uniprot
Match: A0A7S3T494_EMIHU (Hypothetical protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T494_EMIHU) HSP 1 Score: 123 bits (308), Expect = 3.730e-30 Identity = 60/92 (65.22%), Postives = 74/92 (80.43%), Query Frame = 2
Query: 302 LILTEENVITVLAEAKRELSTLFGNNAENTAVGITGDCEFVCLDGPSVVVRLTGRFWHEKAVVLARVANFVQTRIPECVDVEIEDPAQLEDA 577
L+LTEENV VL EA+R+L T+FG+N E+ AVGITG + V LDGP+VV+RL+GRFWH +A VL R+ FV RIPEC+ VEIEDP+QLEDA
Sbjct: 71 LVLTEENVQAVLDEAERDLGTMFGSNPESAAVGITGRADLVELDGPTVVIRLSGRFWHARARVLERLEAFVLERIPECIGVEIEDPSQLEDA 162
BLAST of mRNA_P-fluviatile_contig8.14399.1 vs. uniprot
Match: A0A7S0DXW5_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DXW5_9CRYP) HSP 1 Score: 122 bits (305), Expect = 8.910e-30 Identity = 62/117 (52.99%), Postives = 81/117 (69.23%), Query Frame = 2
Query: 242 RCKHVTGAVAARGMSMAQETLILTEENVITVLAEAKRELSTLFGNNAENTAVGITGDCEFVCLDGPSVVVRLTGRFWHEKAVVLARVANFVQTRIPECVDVEIEDPAQLEDADPQGR 592
R K V+ ++ G M +E L LTEENV L EAK L T+FGN+ EN +GITGD + + LDGP VRL GRFWH++A VLARV N+++TRIPE ++V IEDP QL+D P+ +
Sbjct: 62 RRKGVSVKLSVDGPPMDKEPLDLTEENVQNALEEAKEILGTMFGNSQENREIGITGDVKLINLDGPFATVRLVGRFWHKRADVLARVENYLKTRIPEIIEVSIEDPMQLDDNLPENQ 178
BLAST of mRNA_P-fluviatile_contig8.14399.1 vs. uniprot
Match: A0A0G4GKJ3_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GKJ3_VITBC) HSP 1 Score: 120 bits (300), Expect = 3.520e-29 Identity = 58/94 (61.70%), Postives = 70/94 (74.47%), Query Frame = 2
Query: 293 QETLILTEENVITVLAEAKRELSTLFGNNAENTAVGITGDCEFVCLDGPSVVVRLTGRFWHEKAVVLARVANFVQTRIPECVDVEIEDPAQLED 574
++ LILTEENV L ++ELS LFGN+ EN +VGITGD EF LDGP V++RL GRFWH +A VL RV F+ RIPEC+ VEIEDPA L+D
Sbjct: 73 EDQLILTEENVEKTLEACRQELSALFGNSEENRSVGITGDVEFAGLDGPLVILRLKGRFWHSRATVLERVTAFLLNRIPECLGVEIEDPAMLDD 166
BLAST of mRNA_P-fluviatile_contig8.14399.1 vs. uniprot
Match: L1JDA8_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JDA8_GUITC) HSP 1 Score: 118 bits (295), Expect = 1.890e-28 Identity = 65/130 (50.00%), Postives = 83/130 (63.85%), Query Frame = 2
Query: 215 QLRVLGTTGRCKHVTGAVAAR----GMSMAQETLILTEENVITVLAEAKRELSTLFGNNAENTAVGITGDCEFVCLDGPSVVVRLTGRFWHEKAVVLARVANFVQTRIPECVDVEIEDPAQLEDADPQGR 592
+LR G T VA R G M +E L LTE+NV L E+K L T+FGN+ EN +GITGD + V LDGP VRL GRFWH+++ VLARV N+V+TR+PE V+V IEDP QL+D P+ +
Sbjct: 38 ELRTGGLTSLPLQTRKGVALRLSVGGPPMDKEPLDLTEDNVQQALEESKEILGTMFGNSQENREIGITGDVQLVNLDGPFASVRLVGRFWHKRSDVLARVENYVKTRVPEIVEVSIEDPMQLDDNLPENQ 167
BLAST of mRNA_P-fluviatile_contig8.14399.1 vs. uniprot
Match: A0A7S2FRC3_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2FRC3_9EUKA) HSP 1 Score: 119 bits (297), Expect = 5.220e-28 Identity = 58/96 (60.42%), Postives = 73/96 (76.04%), Query Frame = 2
Query: 296 ETLILTEENVITVLAEAKRELSTLFGNNAENTAVGITGDCEFVCLDGPSVVVRLTGRFWHEKAVVLARVANFVQTRIPECVDVEIEDPAQLEDADP 583
+T IL EEN VLAE EL TLFG+NAE+ VGITG+ FV LDGP +V+ L+GRFWH+++VV+ RV+ +V RIPECVDVEI D AQL+D +P
Sbjct: 44 KTRILDEENAKEVLAECMEELGTLFGSNAESLKVGITGEVSFVELDGPILVISLSGRFWHQRSVVVDRVSKYVMDRIPECVDVEIVDAAQLDDTNP 139
BLAST of mRNA_P-fluviatile_contig8.14399.1 vs. uniprot
Match: A0A7S3EC75_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EC75_9RHOD) HSP 1 Score: 113 bits (283), Expect = 5.830e-27 Identity = 57/94 (60.64%), Postives = 71/94 (75.53%), Query Frame = 2
Query: 299 TLILTEENVITVLAEAKRELSTLFGNNAENTAVGITGDCEFVCLDGPSVVVRLTGRFWHEKAVVLARVANFVQTRIPECVDVEIEDPAQLEDAD 580
T L+EEN+ VL EAK EL TLFGN+ EN VGITGD LDG +VV+RLTGRFWH+++ V+ARV+ ++Q RIPE DV IED +QL+DAD
Sbjct: 47 TTYLSEENINIVLEEAKIELGTLFGNSEENREVGITGDVSLAELDGVTVVLRLTGRFWHKRSDVVARVSQYLQNRIPEVCDVMIEDESQLDDAD 140
BLAST of mRNA_P-fluviatile_contig8.14399.1 vs. uniprot
Match: A0A7S3EXN2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EXN2_9EUKA) HSP 1 Score: 115 bits (287), Expect = 7.220e-27 Identity = 60/104 (57.69%), Postives = 72/104 (69.23%), Query Frame = 2
Query: 272 ARGMSMAQETLILTEENVITVLAEAKRELSTLFGNNAENTAVGITGDCEFVCLDGPSVVVRLTGRFWHEKAVVLARVANFVQTRIPECVDVEIEDPAQLEDADP 583
+R M E +L EEN VL E +EL TLFG NAE+ VGITG FV LDGP++VV L+GRFWHE++ V+ RV +FV RIPECV VEI D AQL+D DP
Sbjct: 30 SRPAMMKPEERVLDEENAKAVLDECMQELGTLFGTNAESLQVGITGIVNFVELDGPTMVVSLSGRFWHERSRVIERVNSFVLERIPECVGVEIVDEAQLDDTDP 133
BLAST of mRNA_P-fluviatile_contig8.14399.1 vs. uniprot
Match: A0A0M0K0E4_9EUKA (WW domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K0E4_9EUKA) HSP 1 Score: 114 bits (284), Expect = 1.160e-26 Identity = 54/92 (58.70%), Postives = 70/92 (76.09%), Query Frame = 2
Query: 308 LTEENVITVLAEAKRELSTLFGNNAENTAVGITGDCEFVCLDGPSVVVRLTGRFWHEKAVVLARVANFVQTRIPECVDVEIEDPAQLEDADP 583
LTEEN VL E +L TLFG+NAE+ AVGITG +FV L+GP +V+ L+GRFWH++++V+ RV +V RIPECVDVEI D AQL+D +P
Sbjct: 10 LTEENARAVLQECMEDLGTLFGSNAESLAVGITGAADFVDLEGPILVISLSGRFWHQRSMVVERVKKYVMDRIPECVDVEIVDVAQLDDTNP 101 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14399.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14399.1 >prot_P-fluviatile_contig8.14399.1 ID=prot_P-fluviatile_contig8.14399.1|Name=mRNA_P-fluviatile_contig8.14399.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=193bp MGLREVATIAVSAILCCSNGRCYVSAFAFTSPLRSPSFQRQSPISTLRTQback to top mRNA from alignment at P-fluviatile_contig8:1084530..1087789- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14399.1 ID=mRNA_P-fluviatile_contig8.14399.1|Name=mRNA_P-fluviatile_contig8.14399.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3260bp|location=Sequence derived from alignment at P-fluviatile_contig8:1084530..1087789- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:1084530..1087789- >mRNA_P-fluviatile_contig8.14399.1 ID=mRNA_P-fluviatile_contig8.14399.1|Name=mRNA_P-fluviatile_contig8.14399.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1158bp|location=Sequence derived from alignment at P-fluviatile_contig8:1084530..1087789- (Porterinema fluviatile SAG_2381)back to top |