mRNA_P-fluviatile_contig8.14393.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14393.1 vs. uniprot
Match: A0A836CIL5_9STRA (Dynein light chain roadblock n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIL5_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.520e-53 Identity = 82/101 (81.19%), Postives = 94/101 (93.07%), Query Frame = 1
Query: 1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKDEMKYMRIRAKRHEVLVAFDRDFLAIVIQRWQPGGVA 303
++VEETLERIKVQPGVEGYVICDM+GQVLRRFPTMSQETAE+YA +M HLA KARGVVRD+NPK E+ Y+RIRAKRHEV+VAFD++FLAIVIQRWQP G +
Sbjct: 2 AQVEETLERIKVQPGVEGYVICDMQGQVLRRFPTMSQETAEMYAASMMHLAHKARGVVRDLNPKSELNYLRIRAKRHEVMVAFDKEFLAIVIQRWQPAGTS 102
BLAST of mRNA_P-fluviatile_contig8.14393.1 vs. uniprot
Match: D7FWL6_ECTSI (Robl_LC7 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWL6_ECTSI) HSP 1 Score: 159 bits (403), Expect = 3.600e-49 Identity = 81/86 (94.19%), Postives = 83/86 (96.51%), Query Frame = 1
Query: 1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKDEMKYMRIRAKRHEVLVAFDRD 258
SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPK E+KYMRIRAKRHEVLVAF +
Sbjct: 2 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKGELKYMRIRAKRHEVLVAFGEE 87
BLAST of mRNA_P-fluviatile_contig8.14393.1 vs. uniprot
Match: A0A6T7GUX9_9STRA (Dynein light chain roadblock n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7GUX9_9STRA) HSP 1 Score: 152 bits (385), Expect = 3.160e-46 Identity = 73/99 (73.74%), Postives = 88/99 (88.89%), Query Frame = 1
Query: 1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKDEMKYMRIRAKRHEVLVAFDRDFLAIVIQRWQPGG 297
SEVEETLER+KVQ GVEGYVIC+ +G VLRRFP MSQE AE YA++MRHLA KARGVVRD+NP++E++Y+RIRAKRHEV++AFD +FL IVIQ+W P G
Sbjct: 2 SEVEETLERVKVQNGVEGYVICNRQGLVLRRFPQMSQEHAEQYADSMRHLANKARGVVRDLNPQNELRYLRIRAKRHEVMIAFDNEFLVIVIQKWTPAG 100
BLAST of mRNA_P-fluviatile_contig8.14393.1 vs. uniprot
Match: A0A6U1LT09_9STRA (Dynein light chain roadblock n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LT09_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.830e-45 Identity = 71/97 (73.20%), Postives = 88/97 (90.72%), Query Frame = 1
Query: 1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKDEMKYMRIRAKRHEVLVAFDRDFLAIVIQRWQP 291
SEVEETLER+KVQPGVEGYVIC+ +GQVLRRFP+M Q+ AE+YA++MR LA KARGVVRD+NP+ E++Y+RIRA+R EV+VA+D +FL IVIQRWQP
Sbjct: 2 SEVEETLERVKVQPGVEGYVICNKQGQVLRRFPSMRQDLAELYADSMRCLAAKARGVVRDLNPQHELRYLRIRARREEVMVAYDNEFLVIVIQRWQP 98
BLAST of mRNA_P-fluviatile_contig8.14393.1 vs. uniprot
Match: F0Y2Y8_AURAN (Dynein light chain roadblock n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2Y8_AURAN) HSP 1 Score: 147 bits (370), Expect = 5.930e-44 Identity = 70/97 (72.16%), Postives = 85/97 (87.63%), Query Frame = 1
Query: 1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKDEMKYMRIRAKRHEVLVAFDRDFLAIVIQRWQP 291
SEVEETLER+K+Q GVEGYVIC +GQVLRR P+M+Q AEIYA+ M L+ KARGVVRD+NPK+E++Y+R+RAKRHEVLVAFD++FL IVIQRW P
Sbjct: 2 SEVEETLERVKIQAGVEGYVICSKQGQVLRRLPSMTQAQAEIYADFMSQLSRKARGVVRDLNPKNELRYLRLRAKRHEVLVAFDQEFLVIVIQRWTP 98
BLAST of mRNA_P-fluviatile_contig8.14393.1 vs. uniprot
Match: A0A7S3H6W3_9STRA (Dynein light chain roadblock n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6W3_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.040e-40 Identity = 67/97 (69.07%), Postives = 81/97 (83.51%), Query Frame = 1
Query: 1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKDEMKYMRIRAKRHEVLVAFDRDFLAIVIQRWQP 291
SEVEET+ERIKVQ GVEGYVIC+ +GQVLRRFPTMS E AE YA M L +ARGVVRD++PK+E+ Y+R+RAKRHE++VA+D F+ IVIQRW P
Sbjct: 2 SEVEETIERIKVQSGVEGYVICNKQGQVLRRFPTMSLEDAERYATTMISLTTQARGVVRDLDPKNELSYLRVRAKRHEIMVAYDVQFIVIVIQRWTP 98
BLAST of mRNA_P-fluviatile_contig8.14393.1 vs. uniprot
Match: A0A812SWU6_SYMMI (DYNLRB1 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SWU6_SYMMI) HSP 1 Score: 131 bits (330), Expect = 4.330e-38 Identity = 63/83 (75.90%), Postives = 77/83 (92.77%), Query Frame = 1
Query: 1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKDEMKYMRIRAKRHEVLVAF 249
SEVEET+ERIKVQPGVEGYVIC+ +GQVLRRFPTM+QETAE Y+EAM L+ +AR VVRD+NPK+E+KY+R+RAKRHE++VAF
Sbjct: 1 SEVEETIERIKVQPGVEGYVICNKQGQVLRRFPTMTQETAEQYSEAMMSLSSQARSVVRDLNPKNELKYLRVRAKRHEIMVAF 83
BLAST of mRNA_P-fluviatile_contig8.14393.1 vs. uniprot
Match: A0A7S1XSI3_9STRA (Dynein light chain roadblock n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSI3_9STRA) HSP 1 Score: 127 bits (318), Expect = 5.110e-36 Identity = 64/97 (65.98%), Postives = 78/97 (80.41%), Query Frame = 1
Query: 1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKDEMKYMRIRAKRHEVLVAFDRDFLAIVIQRWQP 291
S+VEETLERIK++PGV GYVIC+ +G VLRRFP+M+ E A+ YA AM+ LA KA GVVRD+NP D ++Y+RIR KR EV+VA D FL IVIQRW P
Sbjct: 2 SDVEETLERIKMKPGVIGYVICNSDGTVLRRFPSMTPEQAQQYAAAMQKLAAKAGGVVRDMNPTDALEYLRIRCKRQEVVVARDDRFLVIVIQRWMP 98
BLAST of mRNA_P-fluviatile_contig8.14393.1 vs. uniprot
Match: A0A7S2F8W6_9STRA (Dynein light chain roadblock n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F8W6_9STRA) HSP 1 Score: 125 bits (314), Expect = 2.560e-35 Identity = 62/99 (62.63%), Postives = 81/99 (81.82%), Query Frame = 1
Query: 1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQE--TAEIYAEAMRHLALKARGVVRDVNPKDEMKYMRIRAKRHEVLVAFDRDFLAIVIQRWQP 291
SEVEETLERIK + GVEGYVIC+ G VLRR+P ++ A +YAE+MR LA KAR VVRD++P++E++Y+RIRAK HEV+VAFD +FL +VIQ+W+P
Sbjct: 7 SEVEETLERIKEKEGVEGYVICNRHGDVLRRYPNEPKDFQDAAVYAESMRILAWKARSVVRDLDPENELQYLRIRAKTHEVIVAFDLEFLVVVIQKWEP 105
BLAST of mRNA_P-fluviatile_contig8.14393.1 vs. uniprot
Match: A0A7S0SZ17_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZ17_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.710e-34 Identity = 57/95 (60.00%), Postives = 77/95 (81.05%), Query Frame = 1
Query: 1 SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLALKARGVVRDVNPKDEMKYMRIRAKRHEVLVAFDRDFLAIVIQRW 285
SEVE T+ERIK GVEGYVIC+ GQVLRRFPTMS + A+ YA M L +ARGV+RD++PK+++KY+R+R+K+HE++VAFD F+ I++QRW
Sbjct: 8 SEVEATIERIKRLNGVEGYVICNQVGQVLRRFPTMSPDVADEYATKMLSLTTQARGVIRDLSPKNDLKYLRVRSKKHEIMVAFDTQFVVIILQRW 102 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14393.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14393.1 >prot_P-fluviatile_contig8.14393.1 ID=prot_P-fluviatile_contig8.14393.1|Name=mRNA_P-fluviatile_contig8.14393.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=102bp SEVEETLERIKVQPGVEGYVICDMEGQVLRRFPTMSQETAEIYAEAMRHLback to top mRNA from alignment at P-fluviatile_contig8:1000354..1002683- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14393.1 ID=mRNA_P-fluviatile_contig8.14393.1|Name=mRNA_P-fluviatile_contig8.14393.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2330bp|location=Sequence derived from alignment at P-fluviatile_contig8:1000354..1002683- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:1000354..1002683- >mRNA_P-fluviatile_contig8.14393.1 ID=mRNA_P-fluviatile_contig8.14393.1|Name=mRNA_P-fluviatile_contig8.14393.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=612bp|location=Sequence derived from alignment at P-fluviatile_contig8:1000354..1002683- (Porterinema fluviatile SAG_2381)back to top |