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Homology
BLAST of mRNA_P-fluviatile_contig8.14390.1 vs. uniprot
Match: D8LSU4_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU4_ECTSI) HSP 1 Score: 574 bits (1479), Expect = 4.220e-176 Identity = 499/987 (50.56%), Postives = 580/987 (58.76%), Query Frame = 1
Query: 28 SATAADWAFVAILTLCGGAIVAAGPGRVGQTSGHYHSSGSMATISRGVVGELNILTPSRAED---AGKGASP-----RKWGKGGALITLSLELNLYVTFLEEVMRGHIVAYQASPKELLGRRVVRRAKGGCATSAAAATVAATRGGALPLPMLEEGMLTELLRFQVVLQAQQTSRRKVFSTFCSKVMPTLFQILPPEPPVVAAGAASPSPLTAAAKTLVCEALFHEENLEGFREAFARAEAAESTAAVSEATTARSXXXXXXXXXXXXXXXXGVETGDNTANXXXXXXXXXXXXTRRGNVAEAVGSGGGEAPR-RGSYQQQLLDELAALMAGSPTEQSGPRLRLRLGAMAGAPLLLEGFITRLGKAVVQQHETADIHEAAAATAVASVTGGKRSRSSGVATGAGGRGGAGLLSSSPASQMFKLWAVLTSTLSGPLKVASLS---------SRLEAPQQLMLLLPYLRSSNSMLRLLADHDVYRINEDWGGLEFDKLRSFSSSLIRLAGTAVATSG-RSGGDIAEEG-AGSVTPTTTAVKISTGRIGTAAADVPMAAAA---------AAAPAAVPQEFLRAFSSLLGLNHNLLHDDLRPVLRMTFEWAAAAAVAVPGSEEPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDGSLALHDLAIGFVVNLVDTYGRLRQMDHLVRALFCSVADRPRAAAAMLRRGECTEALARAFRRLPEGQIESMWDVFAVQLRKGWNRGDSGSGGEDGGALLAREVDAEMFVLFVRNLHVTSSVASGVGKLCTRLAEESLRSFWAPLQRAAASAAAAVISATATGGPSXXXXXXXXXXXXXXXLKLEERREAEPKL---DGPPQVAADGTSGGVGGVLTAEAMLSFRPALDVHGWLLDLDTKCRFWSAVNETYPPSSPTAAAV----ALGPRYDGNILVEDEHARSVTSDVSSPPSPAAPPSAFSAAGGSATEADLPRIVAAAADALEIGRRAES 2880
+A A DWAFVA+LTLCGG I GH SSGSM +I V+ EL P RA+ A G +P ++WG GGA++ +SL+ +VTFL+EV+RGH QA G R+ G +AA AT GGALP L EG LTELLRFQVVLQAQQTS RKVF+TFCSK+M +LFQ LPPE + A++ SPL AAK + C+ALFHEE+LEG+REAF AAE+ S XXXX XXXXXXXXXXXX G + PR R YQQQLLDE+AAL AGS + G R RLGA+AGAP+LLEGFI RLGK Q DIHEA+ A A SPASQMF+LW+VL STL G L S + P+ +LLLP+LRSSNSMLR LA+HDVYRINEDWGGLEFD+LRSFSSSLIRLA + G R+GGD + +G A T AV R D P AAA AA A +EFLRAF SLLGLNH++LHDDLRPVLRMTFEWAA A +EE XXXXXXXXXXXXXXXXXXXX L LA+ V +LV TYGRLRQMDHLVRALF +V+D P+AAAAMLR EC AL RAFRRLPEGQI SMWDVFA LR+GWN+G LLARE+DAE+FV+FVRNLHVTSSVAS VG LC RLAEESLRSF PL++AA XXXXXXXXXXXXXXX ER E+E DG G+ G GGV ++ MLSFRPALDVHGWLLDLDT+CRFWSAV ++ P++ A A P+ DG+ LVE+ R T+ ++ P+P A S G + LPRI+AAA ALE + S
Sbjct: 182 AAGAGDWAFVAVLTLCGGVIXXXXXXXXXXXXGH--SSGSMTSIDAAVLDELR---PRRADGRLLAVAGPAPATVASKRWGGGGAVMKMSLDA--FVTFLDEVLRGHEAVCQALLLAGDGAGSGGRSSVGGKEAAAVATAG---GGALP--SLAEGALTELLRFQVVLQAQQTSPRKVFTTFCSKLMGSLFQALPPE----GSTASASSPLKTAAKAVACDALFHEEHLEGYREAFT---AAEAXXXXXXXARTGSSPQGEGVAPTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKFKKPRIRVCYQQQLLDEMAALAAGSRGDGEGEG-RSRLGAVAGAPILLEGFILRLGKV---QRGAVDIHEASGA-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPASQMFRLWSVLNSTLLGYLPSVPPSXXXXXXXXDGTVVLPR--LLLLPFLRSSNSMLRFLAEHDVYRINEDWGGLEFDQLRSFSSSLIRLADSCYGRGGSRAGGDNSTDGGAPGSTAAAMAVSGDGARRREDTPDAPAAAARVLVKPTKEQAAGAGAAAEEFLRAFGSLLGLNHSILHDDLRPVLRMTFEWAATAE-----TEEXXXXXXXXXXXXXXXXXXXXXXPPA------------VLRALAVDLVASLVGTYGRLRQMDHLVRALFGAVSDCPQAAAAMLRMDECAAALGRAFRRLPEGQIASMWDVFAAHLREGWNQGAGXXXXXXRNDLLAREMDAELFVVFVRNLHVTSSVASAVGALCLRLAEESLRSFGVPLRQAA----------XXXXXXXXXXXXXXXXXXXXXXXXXGERAESEQHGAIGDG------SGSGGSSGGVPMSQMMLSFRPALDVHGWLLDLDTRCRFWSAVLDSSLPATAAAXXXXXXXAAIPQDDGDTLVEEGGDRDETTGATTTPAPCA--SLLVPPDGDGADVSLPRIIAAATAALETSNSSGS 1107
BLAST of mRNA_P-fluviatile_contig8.14390.1 vs. uniprot
Match: A0A6H5JIT9_9PHAE (Urb2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIT9_9PHAE) HSP 1 Score: 536 bits (1380), Expect = 3.590e-158 Identity = 485/1081 (44.87%), Postives = 560/1081 (51.80%), Query Frame = 1
Query: 43 DWAFVAILTLCGGAIVAAGPGRVGQTSGHYHSSGSMATISRGVVGELNILTPSRAED-----AGKGA--------SPRKWGKGGALITLSLELNLYVTFLEEVMRGHIVAYQASPKELLGRRVVRRAKGGCATSAAAATVAATRGGALPLPMLEEGMLTELLRFQVVLQAQQTSRRKVFSTFCSKVMPTLFQILPPEPPVVAAGAASPSPLTAAAKTLVCEALFHEENLEGFREAFARAEAAESTAAVSEATTARSXXXXXXXXXXXXXXXXGVETGDNTANXXXXXXXXXXXXTRRGNVAEAVGSGGGEAPRRGSYQQQLLDELAALMAGSPTEQSGPRLRLRLGAMAGAPLLLEGFITRLGKAVVQQHETADIHEAAAATAVASVTGGKRSRSSGVATGAGGRGGAGLLSSSPASQMFKLWAVLTSTLSGPLKVASLSSRLEAPQQ-------LMLLLPYLRSSNSMLRLLADHDVYRINEDWGGLEFDKLRSFSSSLIRLAGTAVATSGRSGGDIAEEG--AGSVTPTTTAVKISTGRIGTAAADVPMAAAAA---------AAPAAVPQEFLRAFSSLLGLNHNLLHDDLRPVLRMTFEWAAAA-----AVAVPGS-----------------------------------------------------------EEPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDGSLA------LHD---------------------------------------------LAIGFVVNLVDTYGRLRQMDHLVRALFCSVADRPRAAAAMLRRGECTEALARAFRRLPEGQIESMWDVFAVQLRKGWNRGDSGSGGEDGGA-----LLAREVDAEMFVLFVRNLHVTSSVASGVGKLCTRLAEESLRSFWAPLQRAAASAAAAVISATATGGPSXXXXXXXXXXXXXXXLKLEERREAEPKLDGPPQVAADGTSGGVGGVLTAEAMLSFRPALDVHGWLLDLDTKCRFWSAVNETYPPSSPTAAAVALGPRYDGNILVEDEHARSVTSDVSSPPSPAAPPSAFSAAGGSATEADLPRI 2832
DWAFVA+LTLCGG SSGSM +I V+ EL P RA+ AG A + ++WG GGA++ +SL+ Y TFL+EV+RGH A P G R+ G +AA AT GGALP L EG LTELLRFQVVLQAQQTS RKVF+TFCSK+M +LF+ LPPE ++ A++ SPL AAK + +ALFHEE+LEG+REAF AAE A + A T S XXXXXXXXXX + D + XXXXXXXXXXXX + R YQQQLLDE+AAL AGS + G R RLGA+AGAP+LLEGFI RLGK Q DIHEA+ A A GGKR SPASQMF+LW+VL STL G L A SS A +LLLP+LRSSNSMLRLLA+HDVYRINEDWGGLEF +LRSFSSSLIRLA + A + TP AV R A D P AAA A +EFLRAF SLLGLNH++LHDDLR VLRMTFEWAA A A A PG+ E+ GSL LHD LA+ V +LV TYGRLRQMDHLVRALF +V+D P+AAAAMLRR EC AL RAFRRLPEGQI MWDVFA LR+GWN+G +G G LLARE+DAE+FV+FVRNLHVTSSVAS VG LC+ LAEESLRSF PL++AA XXXXXXXXXXXXXXX EER E+E Q A G G GGV +E MLSFRPALDVHGWLLDLDT+CRFW AV ++ SS TA A A P+ DGN LVE+ T+ ++ P+P P S G +A LPRI
Sbjct: 231 DWAFVAVLTLCGGVXX---XXXXXXXXXXXQSSGSMTSIDAAVLDELR---PRRADGMVLATAGPAAPAPALATVASKRWGGGGAVMKMSLDA--YATFLDEVLRGHEAVCLALPLAGDGAGSGGRSSVGGKEAAAVATAG---GGALP--SLAEGALTELLRFQVVLQAQQTSPRKVFTTFCSKLMGSLFRALPPE---ISTTASASSPLKTAAKAVAFDALFHEEHLEGYREAFT---AAEEAVAAAVARTGSSPQGXXXXXXXXXXDGKNISEPDQSXXXXXXXXXXXXXXXXXXXXXXXXXXKFKKPRSRVCYQQQLLDEMAALAAGSRADGEGGG-RSRLGAVAGAPILLEGFILRLGKV---QRGAVDIHEASGAATAAVAVGGKRXXXXXXXXX---XXXXXXXXXSPASQMFRLWSVLHSTLLGSLPSAPSSSPPPAQPSDGTVVLPRLLLLPFLRSSNSMLRLLAEHDVYRINEDWGGLEFGQLRSFSSSLIRLAESCXXXXXXXXXXXXXXXXXAPASTPAAMAVSRDGARRTEDAPDAPAAAARVLVKPTKEEVTGAGAAAEEFLRAFGSLLGLNHSILHDDLRQVLRMTFEWAATAETAESATAAPGTVRGGDGGSGGPTVVLRALAVDLVASLVGTGGGXXNSTDGGAPASTPAAMAVSRDGARRTEDAPDAPAAAARVLVKPTKEEVTGAGAAAEEFLRAFGSLLGLNHSILHDDLRQVLRMTFEWAATAETXXXXXXXPGTVRGGDGGSGGPTVVLRALAVDLVASLVGTYGRLRQMDHLVRALFGAVSDCPQAAAAMLRRDECAAALGRAFRRLPEGQIAPMWDVFAAHLREGWNQG-AGCGXXXXXXXXRNDLLAREMDAELFVVFVRNLHVTSSVASAVGALCSSLAEESLRSFGVPLRQAA----------XXXXXXXXXXXXXXXXXXXXXXXXGEERAESE-------QHGALGDGSGSGGVPMSEMMLSFRPALDVHGWLLDLDTRCRFWFAVLDS--SSSATAGAGAAIPQDDGNTLVEEGGDGDKTARATTAPAP--PASVLMPPDGDEADASLPRI 1263
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-00_009970.1 |
| Exons | 6 |
| Model size | 3854 |
| Cds size | 2964 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817228.3839169-UTR-P-fluviatile_contig8:989011..989262 | 1622817228.3839169-UTR-P-fluviatile_contig8:989011..989262 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 989012..989262 - |
| 1693571578.783957-UTR-P-fluviatile_contig8:989011..989262 | 1693571578.783957-UTR-P-fluviatile_contig8:989011..989262 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 989012..989262 - |
| 1622817228.3972797-UTR-P-fluviatile_contig8:989618..989754 | 1622817228.3972797-UTR-P-fluviatile_contig8:989618..989754 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 989619..989754 - |
| 1693571578.7944422-UTR-P-fluviatile_contig8:989618..989754 | 1693571578.7944422-UTR-P-fluviatile_contig8:989618..989754 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 989619..989754 - |
| 1622817228.4084883-UTR-P-fluviatile_contig8:990000..990356 | 1622817228.4084883-UTR-P-fluviatile_contig8:990000..990356 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 990001..990356 - |
| 1693571578.8042722-UTR-P-fluviatile_contig8:990000..990356 | 1693571578.8042722-UTR-P-fluviatile_contig8:990000..990356 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 990001..990356 - |
| 1622817228.47466-UTR-P-fluviatile_contig8:994525..994672 | 1622817228.47466-UTR-P-fluviatile_contig8:994525..994672 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 994526..994672 - |
| 1693571578.8525755-UTR-P-fluviatile_contig8:994525..994672 | 1693571578.8525755-UTR-P-fluviatile_contig8:994525..994672 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig8 994526..994672 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817228.421672-CDS-P-fluviatile_contig8:990356..991157 | 1622817228.421672-CDS-P-fluviatile_contig8:990356..991157 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 990357..991157 - |
| 1693571578.8175733-CDS-P-fluviatile_contig8:990356..991157 | 1693571578.8175733-CDS-P-fluviatile_contig8:990356..991157 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 990357..991157 - |
| 1622817228.4348238-CDS-P-fluviatile_contig8:991558..991790 | 1622817228.4348238-CDS-P-fluviatile_contig8:991558..991790 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 991559..991790 - |
| 1693571578.8260763-CDS-P-fluviatile_contig8:991558..991790 | 1693571578.8260763-CDS-P-fluviatile_contig8:991558..991790 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 991559..991790 - |
| 1622817228.4463592-CDS-P-fluviatile_contig8:992094..993638 | 1622817228.4463592-CDS-P-fluviatile_contig8:992094..993638 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 992095..993638 - |
| 1693571578.834973-CDS-P-fluviatile_contig8:992094..993638 | 1693571578.834973-CDS-P-fluviatile_contig8:992094..993638 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 992095..993638 - |
| 1622817228.4617648-CDS-P-fluviatile_contig8:994138..994525 | 1622817228.4617648-CDS-P-fluviatile_contig8:994138..994525 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 994139..994525 - |
| 1693571578.8437028-CDS-P-fluviatile_contig8:994138..994525 | 1693571578.8437028-CDS-P-fluviatile_contig8:994138..994525 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 994139..994525 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14390.1 >prot_P-fluviatile_contig8.14390.1 ID=prot_P-fluviatile_contig8.14390.1|Name=mRNA_P-fluviatile_contig8.14390.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=988bp
MATISRGVVGELNILTPSRAEDAGKGASPRKWGKGGALITLSLELNLYVT
FLEEVMRGHIVAYQASPKELLGRRVVRRAKGGCATSAAAATVAATRGGAL
PLPMLEEGMLTELLRFQVVLQAQQTSRRKVFSTFCSKVMPTLFQILPPEP
PVVAAGAASPSPLTAAAKTLVCEALFHEENLEGFREAFARAEAAESTAAV
SEATTARSAGGAVPAAGGGSGGGVGVETGDNTANSEGGGKKKRRRGTRRG
NVAEAVGSGGGEAPRRGSYQQQLLDELAALMAGSPTEQSGPRLRLRLGAM
AGAPLLLEGFITRLGKAVVQQHETADIHEAAAATAVASVTGGKRSRSSGV
ATGAGGRGGAGLLSSSPASQMFKLWAVLTSTLSGPLKVASLSSRLEAPQQ
LMLLLPYLRSSNSMLRLLADHDVYRINEDWGGLEFDKLRSFSSSLIRLAG
TAVATSGRSGGDIAEEGAGSVTPTTTAVKISTGRIGTAAADVPMAAAAAA
APAAVPQEFLRAFSSLLGLNHNLLHDDLRPVLRMTFEWAAAAAVAVPGSE
EPRTVAAATAAASVAEVAVPAGGSIAGGGGSGGDDGSLALHDLAIGFVVN
LVDTYGRLRQMDHLVRALFCSVADRPRAAAAMLRRGECTEALARAFRRLP
EGQIESMWDVFAVQLRKGWNRGDSGSGGEDGGALLAREVDAEMFVLFVRN
LHVTSSVASGVGKLCTRLAEESLRSFWAPLQRAAASAAAAVISATATGGP
SSPASPSKKARKNKKKLKLEERREAEPKLDGPPQVAADGTSGGVGGVLTA
EAMLSFRPALDVHGWLLDLDTKCRFWSAVNETYPPSSPTAAAVALGPRYD
GNILVEDEHARSVTSDVSSPPSPAAPPSAFSAAGGSATEADLPRIVAAAA
DALEIGRRAESGSGSGSGSGSGSGSGSGSGSGSESEAATAWAPIRAADAV
SGHGRAAQERAWHGRGGGSRRLCNRWPCTGCSRSTPA* back to topmRNA from alignment at P-fluviatile_contig8:989012..994672- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig8.14390.1 ID=mRNA_P-fluviatile_contig8.14390.1|Name=mRNA_P-fluviatile_contig8.14390.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5661bp|location=Sequence derived from alignment at P-fluviatile_contig8:989012..994672- (Porterinema fluviatile SAG_2381)
ACCAATGTGGATGCGGATGCCGCCGATTCGGCGACAGCGGCGGACTGGGC
TTTCGTCGCGATCCTCACTCTCTGCGGCGGAGCCATCGTCGCGGCAGGCC
CGGGGAGAGTAGGGCAAACGAGCGGCCATTACCACAGCAGCGGTTCAATG
GCGACCATCAGCCGTGGTGTTGTTGGTGAGCTAAATATTCTAACGCCATC
ACGAGCAGAAGATGCGGGGAAAGGCGCGTCGCCGAGAAAGTGGGGCAAGG
GGGGAGCGCTGATTACGTTGTCGCTCGAGCTGAACCTGTACGTGACTTTT
CTGGAGGAGGTTATGCGCGGACACATCGTCGCGTACCAGGCGTCGCCGAA
GGAGCTGCTCGGACGACGTGTGGTGCGCCGGGCAAAAGGCGGTTGTGCCA
CATCGGCGGCGGCGGCGACAGTTGCGGCAACGAGAGGCGGTGCACTGCCG
CTGCCGATGCTGGAGGAGGGAATGCTGACAGAGCTTTTGCGCTTTCAGGT
TGTGCTGCAGGCACAGCAGACAAGCCGCCGCAAGGTGGAGTATTTGGACC
CCTCCCCCTTTTGTTCTCTCGGTTGTCGTCGACCCGCAGCATTTCCCGCC
CTGGCCTATGCGTTCGTCGGCTTTCTGGCAACCTCATGTATCGAGCGTAC
GAGGGAAGCCCATTATTCATGATCTTTGATTGTGTGAACTAAGTCAGCAC
TCTTGACACGTACGTTTGGAGCTCTTTTCAGCTGGCGCCTTTTGCGATGG
CTCAACTTCAATGAATACAGAAGAATCACTGCGATGAGGGCAACCTTTCA
ATGGCGCCAAGGGTCGGATTCGGGGGGAGTGGTTAGGAAACCGGAGAACA
AAGATGATTTGTACTTCTCCTGAGAGCTAGGGCGGGCTACTGTATAGATA
TGGACCATCAAATCTTGTAACTGCTGCTGTGTCCTCGTTACCACCGCCTC
GGTGCATTCTCTTGTATACGTTCCCACAAGTCATCTGATCGTTTATACTT
ACGCATTCTGTTTCCATCAAACGAAAATCATCAGGTGTTCTCCACGTTTT
GCTCAAAGGTGATGCCAACGCTATTCCAGATTCTCCCGCCCGAGCCTCCC
GTTGTCGCCGCGGGGGCGGCAAGCCCATCGCCCCTCACGGCCGCGGCGAA
GACGCTCGTCTGCGAAGCTCTTTTCCACGAGGAAAACCTCGAGGGCTTCC
GCGAGGCCTTCGCGAGGGCCGAAGCGGCCGAATCGACGGCAGCGGTTTCC
GAAGCCACGACCGCGAGAAGCGCGGGAGGCGCTGTTCCGGCCGCGGGTGG
TGGTAGCGGTGGCGGTGTTGGTGTCGAGACGGGCGACAACACGGCGAATA
GCGAAGGCGGCGGCAAGAAGAAGCGGAGAAGGGGGACCAGGCGCGGGAAC
GTGGCGGAGGCCGTTGGCAGCGGCGGGGGTGAAGCTCCGCGCCGCGGGTC
TTACCAGCAGCAGCTCTTGGACGAGTTGGCTGCACTAATGGCTGGCTCGC
CGACAGAGCAATCGGGGCCGCGGCTTCGGCTTCGCCTCGGGGCCATGGCC
GGGGCCCCGCTGTTGCTGGAAGGTTTCATCACCCGCCTGGGGAAGGCCGT
GGTGCAACAGCACGAAACGGCCGACATTCACGAGGCGGCGGCGGCGACCG
CTGTCGCGTCGGTCACAGGCGGGAAGCGCTCCCGTTCTTCCGGCGTTGCT
ACTGGCGCCGGTGGCCGTGGCGGTGCCGGCCTGTTGTCCTCGTCGCCGGC
CTCCCAAATGTTCAAGCTTTGGGCCGTGCTGACCTCGACGCTTTCCGGGC
CCTTGAAGGTAGCGTCGCTATCGTCGAGGCTTGAGGCCCCGCAGCAGCTG
ATGCTGCTGCTCCCCTACTTGCGATCGAGCAACTCGATGCTGAGGCTCCT
CGCCGACCATGACGTCTACCGGATCAATGAGGACTGGGGCGGGCTGGAGT
TTGACAAGCTCCGAAGTTTCTCGTCCAGTCTCATCCGCCTCGCCGGCACC
GCGGTGGCCACTTCCGGTAGAAGCGGAGGGGACATCGCTGAGGAGGGGGC
GGGGAGCGTCACCCCTACTACCACCGCGGTGAAAATCAGCACGGGTAGAA
TAGGTACGGCGGCGGCGGATGTTCCCATGGCGGCGGCGGCGGCGGCGGCC
CCGGCCGCGGTCCCTCAGGAGTTCCTTAGGGCCTTCAGCTCGCTGCTGGG
TCTGAACCACAACCTCCTGCACGACGACCTGCGACCGGTGTTGCGGATGA
CGTTTGAGTGGGCGGCGGCCGCGGCGGTGGCAGTGCCGGGGTCGGAGGAA
CCCCGAACAGTGGCAGCAGCAACAGCAGCAGCATCGGTAGCAGAGGTGGC
AGTGCCCGCTGGCGGAAGCATTGCCGGTGGTGGCGGCAGCGGCGGTGACG
ACGGCTCTCTTGCTCTTCACGACCTAGCGATCGGTTTCGTGGTCAACCTA
GTGGACACGTACGGCCGCCTGCGGCAGATGGATCATCTCGTGCGGGCGCT
GTTCTGCTCCGTCGCCGACCGACCCCGAGCCGCGGCCGCCATGCTGAGGA
GAGGCGAGTGCACGGAAGCTCTGGCGCGGTGAGCTTGGGTGCATTGGTTT
AAAGTGCGCCTACGGGAGAGTACAGGGGGAAAGGAGGGTCAACACCTGCT
CGGCTACCGATCGAGAATGTGATCGACAGAAAATGCAGGAGGCACGCAGA
TGGTCTGTCTGGAGAGGCGCGTTCCTCAAAGAGAACGGAAATCCTGTTTG
CTTCGAGCGTCGGCGCACAGGGTTTGTGTAGTGGCCACGATGTCTTGTTT
TGATCCTCTGCTCGCCTCGCCGTATTTGTATCTTTCGCACCGATCTGTAC
TTGCTCTCGGGTGATTTTGCAAAAATTGCCAGTGCCTTTCGACGGCTTCC
AGAGGGCCAGATCGAATCTATGTGGGACGTGTTCGCCGTTCAGTTGCGGA
AGGGATGGAACCGCGGCGACAGCGGCAGCGGCGGCGAAGACGGCGGCGCG
CTGTTGGCGAGAGAGGTGGATGCCGAGATGTTCGTTCTCTTCGTGCGCAA
CCTCCACGTCACGAGCAGCGTTGCCTCCGGGGTGGGGAAGCTCTGTACGC
GCCTGGCGGAGGAGGTGGGACACTGCATGCACACGGCATGAATCAACATC
GAGCTGCGTGCGGGAGGACGGCGTGCGTGTAGTCGTCGTCGTCTTGAGCT
GGTTTGTCTTGTCTCTCCCTGCTGATTTTTCGTCCGCAGGAACTGTGTGC
CACTTAATCCCGCCTGTCCGTCGAGTTGGCGGAGGGGTGCGAGGATGGGG
CGAATAAATGTTTTGTCAAAATTTTGAAGTGCTATTTTTCAAGGTATAGG
GTCGAGCCGGATGCTTTTTGTTTGGGATGGGCTTGAATGCCGCTATTGGT
GTTTACACACGCTGGTGAAATGTTTCCCCTGTTGCGCACCCTCCTGCTTT
TGACGCGTCTTTTCCCCCCCCCTTCACGTGTGTACGTGCGGGGTGTCCTT
CTGGTTGTGCTCCAGAGCCTCCGCAGCTTCTGGGCGCCCCTCCAGCGGGC
CGCCGCTTCCGCCGCCGCTGCGGTGATCTCAGCTACGGCGACCGGCGGTC
CCAGCTCTCCGGCATCGCCCTCTAAGAAGGCGAGGAAGAACAAGAAGAAA
TTAAAACTGGAAGAGCGCCGAGAGGCGGAGCCAAAGCTTGACGGGCCACC
ACAAGTTGCCGCTGACGGGACCAGCGGCGGCGTTGGGGGCGTTTTGACGG
CTGAGGCAATGCTGTCCTTCCGACCTGCGCTGGACGTGCATGGTTGGCTG
TTGGATCTCGACACCAAGTGCCGGTTCTGGTCGGCCGTTAATGAAACTTA
TCCGCCGTCATCACCGACGGCGGCAGCGGTGGCCTTGGGGCCTCGATATG
ACGGCAACATCCTCGTAGAAGATGAACATGCCAGAAGCGTAACCTCCGAT
GTCTCTTCTCCCCCTTCTCCTGCTGCGCCCCCTTCTGCGTTCTCGGCGGC
GGGAGGGAGCGCCACGGAAGCAGACCTACCGCGCATCGTTGCCGCTGCCG
CCGATGCTCTCGAGATCGGTCGCCGGGCTGAGAGCGGCAGCGGCAGCGGC
AGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGAAGCGGAAG
CGAAAGCGAAGCGGCAACAGCATGGGCACCGATACGGGCGGCGGATGCGG
TCTCAGGACATGGTCGGGCGGCGCAGGAGAGAGCGTGGCATGGGCGAGGA
GGAGGCTCGAGAAGACTCTGCAACAGGTGGCCGTGCACAGGGTGCAGCAG
ATCTACGCCCGCTTGAACGGCTTTACCGCTCTCGAGCCAGTGATGGTGGA
ACCGCCCGCGTCGACGGCTGTAGCTTCGGGGCTCGGCAAAGTGAAGCAGG
AGGAAGGGGCGGAAAATGGAGCCGCCGCCGCCGCAGCAGCAGCAGCAGCA
GCAGTATTAGCAGCGAAAGATGATGAAGGGCGATTGGAAGAAGAGGCGAG
AGAGCTCGTTGCGTTCGCTTGCAGGTCTTGCGGCACCGGCGGTAGCGGCG
GCGCGAGCGGCTCGTTGAGATGGGACGATGAAGACCGCTACCGCGGGGAC
GGAGGAGGCGTCAGCTGGAGCATGATGATGCCGTACCTGCCCGTATGGGT
GGGCTTTGCCGCGAAGGAGCAGGTAAGAGCCGGTGGGTACCGCAACATCA
TTCTACGCAGGTAAAGTTGTGCTCGAATGTGTGCGCCTTGTGTTGATGCA
CAAAGCTGCTTCGAATTTATGGGACACGCACCGGTTTGATGTTTTTCAAC
GCGACGGTGTCCGTTGACACCTCAAGCGCCTGCGGCCAGCGCAAGAGCAG
CATTTTCTCGTTCCGCCCAATAAAATTATTTTTTTATTCATTTGTTTATT
TATTTTTGCGCGATGGAGGTGGCCCTGTTTCTGGAGGCGCTCCTGCTGAG
ATGCGCGTCAGACCTCCTTGCTGGCTGCGGAGAGGACGAAAGCCCTCCGC
TGACGCTTCTCGCCGACGCGTCTTTCTACGAAATGGAAGCCGTCGCTCAG
TCTGGTGAGCTCTTCCATGATTGAGGGTGGTCGAATCATTTTGCCGTCTG
CAGGAGGAGTTTCCACTTGTGTGTTCCTCCAGCTTGTACAAAACTTTGTG
GAGGTTCAGTGTCTTCTCGCAGAATGCGAAGTCCTCTTTCACTCTCCGCT
TTTTTTTTCCCCACCTGCGAGCCGGCTGAAGCACACGCCCTCCTCGGGCT
GCCCATATTTGTGAAACGGGTCGCGTGAGTAGAGCCCATTTTTGTACTTT
CCGCTCCTGGTGATCGCCGTCGTGCTTCTCACCCTTGACGGCTTCTCCGC
CCCTCGTCGAACGCTTTTGAACCGACCGACCACACTCCGGTTTCTGCGCC
CGTGCCGCAGCGCCCACGGTGATACTAAGGAGGGTGTACCACGCGGTCAG
GCGTGCAGCGTCCCCGAGGAGCGGGGGCGACGACGACGACGACGGTGGGC
GCACTAGCAGTAGTAACACCGGCAGCACAACGGCGAAGGCGACAACACTG
TTAGGCGTGGCTGAATCATTGGACGGGGTCGTGGCCGCCGTCAAGGCCCT
CGCCGTAGCTCGGCGGCGCGGAGGCGGGGCCGAGGCGGACGACGGCGAAG
GCTACGCGGGG back to topCoding sequence (CDS) from alignment at P-fluviatile_contig8:989012..994672- >mRNA_P-fluviatile_contig8.14390.1 ID=mRNA_P-fluviatile_contig8.14390.1|Name=mRNA_P-fluviatile_contig8.14390.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5928bp|location=Sequence derived from alignment at P-fluviatile_contig8:989012..994672- (Porterinema fluviatile SAG_2381)
ATGGCGACCATCAGCCGTGGTGTTGTTGGTGAGCTAAATATTCTAACGCC
ATCACGAGCAGAAGATGCGGGGAAAGGCGCGTCGCCGAGAAAGTGGGGCA
AGGGGGGAGCGCTGATTACGTTGTCGCTCGAGCTGAACCTGTACGTGACT
TTTCTGGAGGAGGTTATGCGCGGACACATCGTCGCGTACCAGGCGTCGCC
GAAGGAGCTGCTCGGACGACGTGTGGTGCGCCGGGCAAAAGGCGGTTGTG
CCACATCGGCGGCGGCGGCGACAGTTGCGGCAACGAGAGGCGGTGCACTG
CCGCTGCCGATGCTGGAGGAGGGAATGCTGACAGAGCTTTTGCGCTTTCA
GGTTGTGCTGCAGGCACAGCAGACAAGCCGCCGCAAGATGGCGACCATCA
GCCGTGGTGTTGTTGGTGAGCTAAATATTCTAACGCCATCACGAGCAGAA
GATGCGGGGAAAGGCGCGTCGCCGAGAAAGTGGGGCAAGGGGGGAGCGCT
GATTACGTTGTCGCTCGAGCTGAACCTGTACGTGACTTTTCTGGAGGAGG
TTATGCGCGGACACATCGTCGCGTACCAGGCGTCGCCGAAGGAGCTGCTC
GGACGACGTGTGGTGCGCCGGGCAAAAGGCGGTTGTGCCACATCGGCGGC
GGCGGCGACAGTTGCGGCAACGAGAGGCGGTGCACTGCCGCTGCCGATGC
TGGAGGAGGGAATGCTGACAGAGCTTTTGCGCTTTCAGGTTGTGCTGCAG
GCACAGCAGACAAGCCGCCGCAAGGTGTTCTCCACGTTTTGCTCAAAGGT
GATGCCAACGCTATTCCAGATTCTCCCGCCCGAGCCTCCCGTTGTCGCCG
CGGGGGCGGCAAGCCCATCGCCCCTCACGGCCGCGGCGAAGACGCTCGTC
TGCGAAGCTCTTTTCCACGAGGAAAACCTCGAGGGCTTCCGCGAGGCCTT
CGCGAGGGCCGAAGCGGCCGAATCGACGGCAGCGGTTTCCGAAGCCACGA
CCGCGAGAAGCGCGGGAGGCGCTGTTCCGGCCGCGGGTGGTGGTAGCGGT
GGCGGTGTTGGTGTCGAGACGGGCGACAACACGGCGAATAGCGAAGGCGG
CGGCAAGAAGAAGCGGAGAAGGGGGACCAGGCGCGGGAACGTGGCGGAGG
CCGTTGGCAGCGGCGGGGGTGAAGCTCCGCGCCGCGGGTCTTACCAGCAG
CAGCTCTTGGACGAGTTGGCTGCACTAATGGCTGGCTCGCCGACAGAGCA
ATCGGGGCCGCGGCTTCGGCTTCGCCTCGGGGCCATGGCCGGGGCCCCGC
TGTTGCTGGAAGGTTTCATCACCCGCCTGGGGAAGGCCGTGGTGCAACAG
CACGAAACGGCCGACATTCACGAGGCGGCGGCGGCGACCGCTGTCGCGTC
GGTCACAGGCGGGAAGCGCTCCCGTTCTTCCGGCGTTGCTACTGGCGCCG
GTGGCCGTGGCGGTGCCGGCCTGTTGTCCTCGTCGCCGGCCTCCCAAATG
TTCAAGCTTTGGGCCGTGCTGACCTCGACGCTTTCCGGGCCCTTGAAGGT
AGCGTCGCTATCGTCGAGGCTTGAGGCCCCGCAGCAGCTGATGCTGCTGC
TCCCCTACTTGCGATCGAGCAACTCGATGCTGAGGCTCCTCGCCGACCAT
GACGTCTACCGGATCAATGAGGACTGGGGCGGGCTGGAGTTTGACAAGCT
CCGAAGTTTCTCGTCCAGTCTCATCCGCCTCGCCGGCACCGCGGTGGCCA
CTTCCGGTAGAAGCGGAGGGGACATCGCTGAGGAGGGGGCGGGGAGCGTC
ACCCCTACTACCACCGCGGTGAAAATCAGCACGGGTAGAATAGGTACGGC
GGCGGCGGATGTTCCCATGGCGGCGGCGGCGGCGGCGGCCCCGGCCGCGG
TCCCTCAGGAGTTCCTTAGGGCCTTCAGCTCGCTGCTGGGTCTGAACCAC
AACCTCCTGCACGACGACCTGCGACCGGTGTTGCGGATGACGTTTGAGTG
GGCGGCGGCCGCGGCGGTGGCAGTGCCGGGGTCGGAGGAACCCCGAACAG
TGGCAGCAGCAACAGCAGCAGCATCGGTAGCAGAGGTGGCAGTGCCCGCT
GGCGGAAGCATTGCCGGTGGTGGCGGCAGCGGCGGTGACGACGGCTCTCT
TGCTCTTCACGACCTAGCGATCGGTTTCGTGGTCAACCTAGTGGACACGT
ACGGCCGCCTGCGGCAGATGGATCATCTCGTGCGGGCGCTGTTCTGCTCC
GTCGCCGACCGACCCCGAGCCGCGGCCGCCATGCTGAGGAGAGGCGAGTG
CACGGAAGCTCTGGCGCGGTGTTCTCCACGTTTTGCTCAAAGGTGATGCC
AACGCTATTCCAGATTCTCCCGCCCGAGCCTCCCGTTGTCGCCGCGGGGG
CGGCAAGCCCATCGCCCCTCACGGCCGCGGCGAAGACGCTCGTCTGCGAA
GCTCTTTTCCACGAGGAAAACCTCGAGGGCTTCCGCGAGGCCTTCGCGAG
GGCCGAAGCGGCCGAATCGACGGCAGCGGTTTCCGAAGCCACGACCGCGA
GAAGCGCGGGAGGCGCTGTTCCGGCCGCGGGTGGTGGTAGCGGTGGCGGT
GTTGGTGTCGAGACGGGCGACAACACGGCGAATAGCGAAGGCGGCGGCAA
GAAGAAGCGGAGAAGGGGGACCAGGCGCGGGAACGTGGCGGAGGCCGTTG
GCAGCGGCGGGGGTGAAGCTCCGCGCCGCGGGTCTTACCAGCAGCAGCTC
TTGGACGAGTTGGCTGCACTAATGGCTGGCTCGCCGACAGAGCAATCGGG
GCCGCGGCTTCGGCTTCGCCTCGGGGCCATGGCCGGGGCCCCGCTGTTGC
TGGAAGGTTTCATCACCCGCCTGGGGAAGGCCGTGGTGCAACAGCACGAA
ACGGCCGACATTCACGAGGCGGCGGCGGCGACCGCTGTCGCGTCGGTCAC
AGGCGGGAAGCGCTCCCGTTCTTCCGGCGTTGCTACTGGCGCCGGTGGCC
GTGGCGGTGCCGGCCTGTTGTCCTCGTCGCCGGCCTCCCAAATGTTCAAG
CTTTGGGCCGTGCTGACCTCGACGCTTTCCGGGCCCTTGAAGGTAGCGTC
GCTATCGTCGAGGCTTGAGGCCCCGCAGCAGCTGATGCTGCTGCTCCCCT
ACTTGCGATCGAGCAACTCGATGCTGAGGCTCCTCGCCGACCATGACGTC
TACCGGATCAATGAGGACTGGGGCGGGCTGGAGTTTGACAAGCTCCGAAG
TTTCTCGTCCAGTCTCATCCGCCTCGCCGGCACCGCGGTGGCCACTTCCG
GTAGAAGCGGAGGGGACATCGCTGAGGAGGGGGCGGGGAGCGTCACCCCT
ACTACCACCGCGGTGAAAATCAGCACGGGTAGAATAGGTACGGCGGCGGC
GGATGTTCCCATGGCGGCGGCGGCGGCGGCGGCCCCGGCCGCGGTCCCTC
AGGAGTTCCTTAGGGCCTTCAGCTCGCTGCTGGGTCTGAACCACAACCTC
CTGCACGACGACCTGCGACCGGTGTTGCGGATGACGTTTGAGTGGGCGGC
GGCCGCGGCGGTGGCAGTGCCGGGGTCGGAGGAACCCCGAACAGTGGCAG
CAGCAACAGCAGCAGCATCGGTAGCAGAGGTGGCAGTGCCCGCTGGCGGA
AGCATTGCCGGTGGTGGCGGCAGCGGCGGTGACGACGGCTCTCTTGCTCT
TCACGACCTAGCGATCGGTTTCGTGGTCAACCTAGTGGACACGTACGGCC
GCCTGCGGCAGATGGATCATCTCGTGCGGGCGCTGTTCTGCTCCGTCGCC
GACCGACCCCGAGCCGCGGCCGCCATGCTGAGGAGAGGCGAGTGCACGGA
AGCTCTGGCGCGTGCCTTTCGACGGCTTCCAGAGGGCCAGATCGAATCTA
TGTGGGACGTGTTCGCCGTTCAGTTGCGGAAGGGATGGAACCGCGGCGAC
AGCGGCAGCGGCGGCGAAGACGGCGGCGCGCTGTTGGCGAGAGAGGTGGA
TGCCGAGATGTTCGTTCTCTTCGTGCGCAACCTCCACGTCACGAGCAGCG
TTGCCTCCGGGGTGGGGAAGCTCTGTACGCGCCTGGCGGAGGAGTGCCTT
TCGACGGCTTCCAGAGGGCCAGATCGAATCTATGTGGGACGTGTTCGCCG
TTCAGTTGCGGAAGGGATGGAACCGCGGCGACAGCGGCAGCGGCGGCGAA
GACGGCGGCGCGCTGTTGGCGAGAGAGGTGGATGCCGAGATGTTCGTTCT
CTTCGTGCGCAACCTCCACGTCACGAGCAGCGTTGCCTCCGGGGTGGGGA
AGCTCTGTACGCGCCTGGCGGAGGAGAGCCTCCGCAGCTTCTGGGCGCCC
CTCCAGCGGGCCGCCGCTTCCGCCGCCGCTGCGGTGATCTCAGCTACGGC
GACCGGCGGTCCCAGCTCTCCGGCATCGCCCTCTAAGAAGGCGAGGAAGA
ACAAGAAGAAATTAAAACTGGAAGAGCGCCGAGAGGCGGAGCCAAAGCTT
GACGGGCCACCACAAGTTGCCGCTGACGGGACCAGCGGCGGCGTTGGGGG
CGTTTTGACGGCTGAGGCAATGCTGTCCTTCCGACCTGCGCTGGACGTGC
ATGGTTGGCTGTTGGATCTCGACACCAAGTGCCGGTTCTGGTCGGCCGTT
AATGAAACTTATCCGCCGTCATCACCGACGGCGGCAGCGGTGGCCTTGGG
GCCTCGATATGACGGCAACATCCTCGTAGAAGATGAACATGCCAGAAGCG
TAACCTCCGATGTCTCTTCTCCCCCTTCTCCTGCTGCGCCCCCTTCTGCG
TTCTCGGCGGCGGGAGGGAGCGCCACGGAAGCAGACCTACCGCGCATCGT
TGCCGCTGCCGCCGATGCTCTCGAGATCGGTCGCCGGGCTGAGAGCGGCA
GCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGC
GGAAGCGGAAGCGAAAGCGAAGCGGCAACAGCATGGGCACCGATACGGGC
GGCGGATGCGGTCTCAGGACATGGTCGGGCGGCGCAGGAGAGAGCGTGGC
ATGGGCGAGGAGGAGGCTCGAGAAGACTCTGCAACAGGTGGCCGTGCACA
GGGTGCAGCAGATCTACGCCCGCTTGAAGCCTCCGCAGCTTCTGGGCGCC
CCTCCAGCGGGCCGCCGCTTCCGCCGCCGCTGCGGTGATCTCAGCTACGG
CGACCGGCGGTCCCAGCTCTCCGGCATCGCCCTCTAAGAAGGCGAGGAAG
AACAAGAAGAAATTAAAACTGGAAGAGCGCCGAGAGGCGGAGCCAAAGCT
TGACGGGCCACCACAAGTTGCCGCTGACGGGACCAGCGGCGGCGTTGGGG
GCGTTTTGACGGCTGAGGCAATGCTGTCCTTCCGACCTGCGCTGGACGTG
CATGGTTGGCTGTTGGATCTCGACACCAAGTGCCGGTTCTGGTCGGCCGT
TAATGAAACTTATCCGCCGTCATCACCGACGGCGGCAGCGGTGGCCTTGG
GGCCTCGATATGACGGCAACATCCTCGTAGAAGATGAACATGCCAGAAGC
GTAACCTCCGATGTCTCTTCTCCCCCTTCTCCTGCTGCGCCCCCTTCTGC
GTTCTCGGCGGCGGGAGGGAGCGCCACGGAAGCAGACCTACCGCGCATCG
TTGCCGCTGCCGCCGATGCTCTCGAGATCGGTCGCCGGGCTGAGAGCGGC
AGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAG
CGGAAGCGGAAGCGAAAGCGAAGCGGCAACAGCATGGGCACCGATACGGG
CGGCGGATGCGGTCTCAGGACATGGTCGGGCGGCGCAGGAGAGAGCGTGG
CATGGGCGAGGAGGAGGCTCGAGAAGACTCTGCAACAGGTGGCCGTGCAC
AGGGTGCAGCAGATCTACGCCCGCTTGA back to top
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