mRNA_P-fluviatile_contig8.14389.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14389.1 vs. uniprot
Match: D7FWM3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWM3_ECTSI) HSP 1 Score: 934 bits (2414), Expect = 0.000e+0 Identity = 716/1066 (67.17%), Postives = 792/1066 (74.30%), Query Frame = 2
Query: 104 MAHMGSIPPAFLCTAGDLRH------QLVVQRQRRAPAPTLATATRSTPVIRRRPGTPTAVTSXXXXXXXXXXXXXI--VVGPTAGHSQKQVEWLGRIDYYGGREMWRKAEDKFQQMQDEGVYPTLSICNSLMEAYLKGKRYVNAVGFLEDLCLGNVLTDVAHDGFRVIKM-PAASGFRCGAVLTSIQGDGGGAAVQTTAIVPNLRTFNLVLATLAAVGKWKTAMDLSEPLRRSKRGAAASAAASDGGESGRXXXXXXXXRGRGDVARNAVKSVAEGLMADAETFTHLIVACGKGAESDRSRQVFDEMRAMGIAPPPQATAALIKSLAKGGQGSSEALRLLGDMRAAAAXXXXXXXGRGAGGRDSTVYLG-GLPAGTAEAEAARERSEAAAQRLGFEAAIEACVANGEWQKAVSLLDEMRQARMHPDARCYGNAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRASEEGGLELDVVSYRAALAGLRREKRWEAAVKLLGEMGRRGVGPDELCYATAMNTCVAAQQPLRALDLFRDMRDVGRVFPRVPSVTALVEAYAALGRWEDALAALRTLSASGVKPDGRAIAYAMSACNSAKKWDQTLGLYQYVTKMEIDSSMESLVLVARAYGARKDWQAVAGVLAAAEEKCTSA----------GAARSAAAPAEAKYPPAELYEVVSRSLALAGRWEEAASAVRRLEKLPSGKYRHQRGGERAGGAAAVEGTSAAGLGTYEMIMSAALAAGRYDAVLAQADAARAALRDYANRGGEGRGETRA---GWKGRGGASSCDDGGDDLNPAALVHEATAAGRLGHWDRVSPLIARAMRSPELRGVAGARLYSALISASTACGKPGRGLEIYEEMRGSAXXXXXXXXXXXXXXXXXXXX-----------------REGEHLSRG*----PRXXXXXXXXXXXXXXXXGAAFLAALDACAAVGGEESVSLAMGVTKDAAAAARDFRQSCGHGGGGDGKAAKARLSTGRLAEVLSKA 3169
M H ++ PAFL T+G Q VQR+RR+ AP L+T +R+ + RRP P + S XXXXXXX VVGP AGHS++QV WLGR+DYYGGR+MWRKAEDKFQQMQDEGVYPTL +CNSLMEAYLKGKRYVNAVGFLEDLCLGN+L+DVAHDG R K+ PAASG + G AV T IVPNLRTFNLVLATLA+ GKWK A+D+S P+R K AA S XXXXXXXX GD+ARNAVKSVA GL AD+ET+THLIVACGKG E DRSRQ+FDEMR+ GI+PP +ATAALIK+LAKGG+GSSEALRLLGDMRAAA GA GR VYLG G+P+ + AARE+SEAAAQ LGFE AIEAC NGEWQKAVSLLDEMRQARM+PDARCYGNA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRASEEGGLELDVVSYRAAL GLRREKRWEAAVKLLG+M RRG+GPDE+C A AMNTCVAAQQPLRALDLFRDMRDVGRVFPR+ SVTAL+EA+AALGRWEDAL LR LSASGVKPDGRAIA+AM+ACN+A+KW+QT+ LY Y KM I+SSME LVLVARAYGA KDWQAV GVLA AEE C+ G R+AA PA K+PPAELYEV +RSLALAG WEEAASAVRRLEKL K R GA A TSAAGLGTYEMI+ AALAAG ++AVLAQADAARAALRD ++ G G +GRGG + LNP AL HEA AAGRLG WDRVSPL+A+AMRSP+LRGVAG RLY+ALI+A+ ACGKP RGLE+++EM + XXXXXXXXXXXX GE + G XXXXXXXXXXX FLAALDACAAVGGEESV+LA+GVTKDA D K K RLS+ +LA VLSKA
Sbjct: 1 MVHASAVSPAFLHTSGSTGTRVAFVAQQTVQRERRSLAPKLSTRSRAP--VTRRPQAPRGIVSSDGGSGXXXXXXXXXXVVGPAAGHSEEQVAWLGRLDYYGGRQMWRKAEDKFQQMQDEGVYPTLPLCNSLMEAYLKGKRYVNAVGFLEDLCLGNILSDVAHDGLRGAKVSPAASGSXXXXXXXXXX-EAGETAVATAPIVPNLRTFNLVLATLASAGKWKKALDVSAPMRAGKDPAAGSXXXXX------XXXXXXXXXXXGDLARNAVKSVAGGLTADSETYTHLIVACGKGGEPDRSRQLFDEMRSRGISPPAEATAALIKALAKGGRGSSEALRLLGDMRAAAQG--------GAAGRSGGVYLGDGMPSDGMDG-AAREKSEAAAQSLGFEGAIEACAVNGEWQKAVSLLDEMRQARMYPDARCYGNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRASEEGGLELDVVSYRAALGGLRREKRWEAAVKLLGDMQRRGLGPDEVCTAMAMNTCVAAQQPLRALDLFRDMRDVGRVFPRISSVTALLEAHAALGRWEDALVELRALSASGVKPDGRAIAFAMAACNAARKWEQTISLYHYALKMGIESSMEGLVLVARAYGAGKDWQAVLGVLATAEEACSXXXXXXXXXXXRGGERAAAVPA-VKHPPAELYEVAARSLALAGMWEEAASAVRRLEKLSPRKTRE--------GAGAAARTSAAGLGTYEMILGAALAAGCFEAVLAQADAARAALRDASSSPSSSSGYDHGASQGGQGRGGGGGVRE----LNPGALAHEAAAAGRLGQWDRVSPLLAKAMRSPDLRGVAGCRLYAALITAAAACGKPRRGLEVFQEMVEESRSGXXXXXXXXXXXXVDAAVLGAAAAVVSGGVEWSDSMSGEDGTTGEVAMEEAFSRSGXXXXXXXXXXXXXTFLAALDACAAVGGEESVTLAIGVTKDAXXXXXXXXXXXXXXXXXDAK--KPRLSSRQLAAVLSKA 1033 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14389.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14389.1 >prot_P-fluviatile_contig8.14389.1 ID=prot_P-fluviatile_contig8.14389.1|Name=mRNA_P-fluviatile_contig8.14389.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=942bp MTRRVSMAHMGSIPPAFLCTAGDLRHQLVVQRQRRAPAPTLATATRSTPVback to top mRNA from alignment at P-fluviatile_contig8:965396..983285+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14389.1 ID=mRNA_P-fluviatile_contig8.14389.1|Name=mRNA_P-fluviatile_contig8.14389.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=17890bp|location=Sequence derived from alignment at P-fluviatile_contig8:965396..983285+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:965396..983285+ >mRNA_P-fluviatile_contig8.14389.1 ID=mRNA_P-fluviatile_contig8.14389.1|Name=mRNA_P-fluviatile_contig8.14389.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5652bp|location=Sequence derived from alignment at P-fluviatile_contig8:965396..983285+ (Porterinema fluviatile SAG_2381)back to top |