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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 307 |
| Cds size | 306 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817215.4651136-CDS-P-fluviatile_contig8:884397..884479 | 1622817215.4651136-CDS-P-fluviatile_contig8:884397..884479 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 884398..884479 + |
| 1693571533.427907-CDS-P-fluviatile_contig8:884397..884479 | 1693571533.427907-CDS-P-fluviatile_contig8:884397..884479 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 884398..884479 + |
| 1622817215.4752643-CDS-P-fluviatile_contig8:885502..885680 | 1622817215.4752643-CDS-P-fluviatile_contig8:885502..885680 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 885503..885680 + |
| 1693571533.4377618-CDS-P-fluviatile_contig8:885502..885680 | 1693571533.4377618-CDS-P-fluviatile_contig8:885502..885680 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 885503..885680 + |
| 1622817215.4863832-CDS-P-fluviatile_contig8:886755..886801 | 1622817215.4863832-CDS-P-fluviatile_contig8:886755..886801 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 886756..886801 + |
| 1693571533.447641-CDS-P-fluviatile_contig8:886755..886801 | 1693571533.447641-CDS-P-fluviatile_contig8:886755..886801 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig8 886756..886801 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14379.1 >prot_P-fluviatile_contig8.14379.1 ID=prot_P-fluviatile_contig8.14379.1|Name=mRNA_P-fluviatile_contig8.14379.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=102bp
MLVTGGGDSLWNDQRIPFCITGRLSLPGLEVELEKQHLEGYHNRIAYFGR
VLPGGGGDKPDGCPGNDSPPPTRLVGVYEHGDFVLLRNPNADLDSSSRTL
GG back to topmRNA from alignment at P-fluviatile_contig8:884398..886801+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig8.14379.1 ID=mRNA_P-fluviatile_contig8.14379.1|Name=mRNA_P-fluviatile_contig8.14379.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2404bp|location=Sequence derived from alignment at P-fluviatile_contig8:884398..886801+ (Porterinema fluviatile SAG_2381)
ATGCTCGTGACGGGCGGCGGAGACTCTCTCTGGAACGACCAGCGCATCCC
TTTCTGCATCACGGGCCGCCTGTCACTCCCGGGTAAGCACAAGGACCCAC
TGCTGCTGCATCCAAGGTTCATGTCCCTGCCAGACCGCTCGTTGAGAACG
GCGTCTTGGCGAGGAGGCAGCGGGCGTCCTCCCGCGGTGCCGCTGCCCGT
CCCGACGGCTTGCCTGCCAAACAAGCAGTGGCGCGCTGGCTTGTGCTCAA
ACTCGATCGAAGAAGGCTAGCGACAAGAAACGAGCTACACGAGCTGGCGA
TGTTTGGGAAGCACTTCTCGAGAGGGAGGGACGGAGGGAGGAAATGTGCT
TAGACTCATGTTTGCCGTGTGACGGTCACAGGACCACCTCGCCCCGTATT
GAAACCCGAGGTGGAGCCGGTCTACCACTATTTTCCGAAAGGATTGGCCT
AACATTGCAGCAAGAATTACGCCAAGCTCCGTAGGGTGTTCGGAAAGTCG
CGCCGATGGCCGACCTGAAAACCCTTACGTGAGCCTTCGGCGTGTTGCCC
TCGTTTGTCTAGTGTGTGTGCAGAGTACGGCTTTGTGCCATCGTTTTTAC
CGTCATATTTTCCCGGCCTTGGCAAGCGTGGGCCATCGGTGTGCATTGCA
CGGAGTACAACTGCCTCGCGAGTGCGTGGCCTGACATTTGTAGCGCAACG
CAAGCTAGAATCTAACCCATACGTGCACAGCAATCGTGCGCGCATCGATC
CGCCAACCCAGCATTAACCCGCCACATCAAGGAGGGATCAGAATCCAGCG
CCCATGTTGTGTGCACTCGGCTCTCCTATAACGGACAAGAAACACTCTCG
CACGCGACGAGGGCTTTTTTCCTCAGTGACCCTAACGTATGCTGCCCCTC
GCCTGCTCTGCCTTCCAATCCCTTCACGCCCTATCTCGTGCCCGTGTTAA
TAACTTCAACACAACAAGCGACGCCGGGTCGACAAAAACAAACAAAAAAT
ACCGCTACCTTCGCCCCAACAACAACCACACATGGAATGTCAACGGAACC
GTCAACTTCTGGGCTGCCAACAACGACGCCGACGTCGACGGTACATAAAT
TTCAGGTCTAGAGGTGGAGTTGGAGAAGCAGCACCTGGAGGGCTACCACA
ACCGCATCGCATACTTCGGCCGGGTGCTGCCTGGCGGGGGCGGTGACAAG
CCCGATGGCTGTCCCGGGAACGACTCGCCGCCTCCTACACGTCTCGTCGG
TGTCTATGAGCACGGCGATTTCGTTCTGCTCAGGTACAGCGCGTGGGGAA
GGAAAGCGTGGCTTGTGGGGGTGGGCAAGACGGGAGTGCTGTTGGCGTTG
ACCGAAAGACCCGCCTCTCGCGCGTCGCCAACAACGACTGGTCAGTGCAC
GTGAGAACGGAGACGGGGGCTGCGGTGGGGGGTGTACTCATAGTCGTGCA
TGCCGTAGTCGTTAGACCATTGACCTCGCATCCCTACAAAGCCGGGACGG
AGCACGCCGGGTTCTCACCGGACCAGGCTCTCACATCACCAAGCGCGAAG
CGCCGTGAGGTATTCGGCGAGTCGCATGAAGGGTTGCATCCTGCTAAGGG
TGTTCGGCATCTTGTGCTTACTTCCTTGCATACGGATGACAGCTGCGTAT
GGCTTAATTTATTTTCTGGTTCTTTCACTTCCAGAGACAGTTGTAAGCAC
TGTGTAACTGCCTCGAGGGTGCTTGACCATTTTAACACAACGTGGTGCGA
TCATCCCCCTTGCGCGGAATGAGGGTTCTCCACTCCGCACAACATGATCT
TCTCGACCACCATTATGGTTACCGCCAAAAAAACCAGGGGTAGAAAAAAA
GACTGTAACCTGGTTGCCGAGTTCACGAAGTGAATTGGCTTGTTTTACAA
CGTCGTTGCCAAGCGACGAACATCCAATCCCGATGGCAAACACCGAGGTG
AGAGCCAGCGGGGGGGCAGCTGCGGTGGGAGGGAGGAAATGGCATGCGCG
TGGAGCTTTCTTGTTTGTAGGGTTGGCGACAGAGGAGGGGAAAGAAGACG
TGGGGGAGGGGGAGGAGCAAGGAGAAGCAATCACACCATCAGTTGTTCGT
ACGCGTGCGCGTGCGTGTGTCAATGTGCTTGGGTAGAGTGCCAGCACATG
TGCATCGTACTCAGGCGAAAAAAGGAGGCCAACATTCACATGGCCAAAAA
TCATCACCCCCACAGCCGCGATCCCACGTGTCTCCACCGCTATGCCTGCG
CTATTGCATTTTCCATCCCAAAAGGTAGCCCGCCTGGCCCGCTTGTCGCC
CTCAGCGTCGCTCTTCCTATTGCCGTTGCCCCATCCGCCTTCATTTTCGT
CTCGACAGGAACCCGAACGCTGACCTAGATTCCAGCAGCCGAACCCTCGG
AGGC back to topCoding sequence (CDS) from alignment at P-fluviatile_contig8:884398..886801+ >mRNA_P-fluviatile_contig8.14379.1 ID=mRNA_P-fluviatile_contig8.14379.1|Name=mRNA_P-fluviatile_contig8.14379.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=612bp|location=Sequence derived from alignment at P-fluviatile_contig8:884398..886801+ (Porterinema fluviatile SAG_2381)
ATGCTCGTGACGGGCGGCGGAGACTCTCTCTGGAACGACCAGCGCATCCC
TTTCTGCATCACGGGCCGCCTGTCACTCCCGGATGCTCGTGACGGGCGGC
GGAGACTCTCTCTGGAACGACCAGCGCATCCCTTTCTGCATCACGGGCCG
CCTGTCACTCCCGGGTCTAGAGGTGGAGTTGGAGAAGCAGCACCTGGAGG
GCTACCACAACCGCATCGCATACTTCGGCCGGGTGCTGCCTGGCGGGGGC
GGTGACAAGCCCGATGGCTGTCCCGGGAACGACTCGCCGCCTCCTACACG
TCTCGTCGGTGTCTATGAGCACGGCGATTTCGTTCTGCTCAGGTCTAGAG
GTGGAGTTGGAGAAGCAGCACCTGGAGGGCTACCACAACCGCATCGCATA
CTTCGGCCGGGTGCTGCCTGGCGGGGGCGGTGACAAGCCCGATGGCTGTC
CCGGGAACGACTCGCCGCCTCCTACACGTCTCGTCGGTGTCTATGAGCAC
GGCGATTTCGTTCTGCTCAGGAACCCGAACGCTGACCTAGATTCCAGCAG
CCGAACCCTCGGAGGCGAACCCGAACGCTGACCTAGATTCCAGCAGCCGA
ACCCTCGGAGGC back to top
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