mRNA_P-fluviatile_contig8.14370.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14370.1 vs. uniprot
Match: A0A6H5J8L0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8L0_9PHAE) HSP 1 Score: 487 bits (1254), Expect = 1.150e-166 Identity = 236/267 (88.39%), Postives = 259/267 (97.00%), Query Frame = 3
Query: 300 SNFGKRKADDFLRRQELAMDPRFQATVVLPGDDVTDSTTRTTKNIRLGPGLVQHTQDKVLATRAGMLRYRPPCSFWVESNGRRYGARVEDQVLGVVEDRMGESYKVNIFGTCAALLGMLEFDGASKRSKPNLKRGSLVFCRVSAVDKDMETELTCTSTHHGSKKDWMTGQSTFGELKGGKMERCSLLLSKSLTKPNCRVLKSLAKHMPFEIAAGLNGAFWVDSGSEASTIVICNAILNSEVMTDDQTEAMVERLATHMKRELAAMDA 1100
S+FGKRKADDFLRRQELAMDPRF+ATVVLPGDDVT++TTRTT+++RLGPGLVQH QDKVLATRAG+LRYRPPC++WVESNGRRYGARVEDQVLG+VEDRM +SYKVNIFG+CAALLGMLEFDGASKRSKPNL+ GSLVFCRV+AV+KDMETELTCTSTHHGSKKDWMTGQSTFGEL+GGKMERCSLLLSKSLTKP+CRVLKSLAK+MPFE+AAGLNG FWVDSGSEA TIVICNAILNSEVMTD QT+AMV+RLA HMK+ LAAMDA
Sbjct: 60 SSFGKRKADDFLRRQELAMDPRFKATVVLPGDDVTETTTRTTRSLRLGPGLVQHAQDKVLATRAGVLRYRPPCTYWVESNGRRYGARVEDQVLGIVEDRMADSYKVNIFGSCAALLGMLEFDGASKRSKPNLRTGSLVFCRVAAVNKDMETELTCTSTHHGSKKDWMTGQSTFGELRGGKMERCSLLLSKSLTKPDCRVLKSLAKYMPFELAAGLNGTFWVDSGSEAHTIVICNAILNSEVMTDAQTDAMVDRLAKHMKQGLAAMDA 326
BLAST of mRNA_P-fluviatile_contig8.14370.1 vs. uniprot
Match: D8LG41_ECTSI (RNA binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG41_ECTSI) HSP 1 Score: 442 bits (1137), Expect = 3.560e-150 Identity = 214/248 (86.29%), Postives = 233/248 (93.95%), Query Frame = 3
Query: 354 MDPRFQATVVLPGDDVTDSTTRTTKNIRLGPGLVQHTQDKVLATRAGMLRYRPPCSFWVESNGRRYGARVEDQVLGVVEDRMGESYKVNIFGTCAALLGMLEFDGASKRSKPNLKRGSLVFCRVSAVDKDMETELTCTSTHHGSKKDWMTGQSTFGELKGGKMERCSLLLSKSLTKPNCRVLKSLAKHMPFEIAAGLNGAFWVDSGSEASTIVICNAILNSEVMTDDQTEAMVERLATHMKRELAAMD 1097
MDPRF+ATVVLPGDDVT++TTRTT+++RLGPGLVQH QDKV+ATRAG+LRYRPPCS+WVESNGRRYGARVEDQVLG+VEDRM +SYKVNIFG+CAALLGMLEFDGASKRSKPNL+ GSLVFCRV+AV+KDMETELTCTSTHHGSKKDWMTGQSTFGEL+GGKMERCSLLLSKSLTKP+CRVLKSLAKHMPFE+AAGLNG FWVDSGSEA TIVICNAILNSEVMTD RLA HMK+ LAAMD
Sbjct: 1 MDPRFKATVVLPGDDVTETTTRTTRSLRLGPGLVQHAQDKVMATRAGVLRYRPPCSYWVESNGRRYGARVEDQVLGIVEDRMADSYKVNIFGSCAALLGMLEFDGASKRSKPNLRTGSLVFCRVAAVNKDMETELTCTSTHHGSKKDWMTGQSTFGELRGGKMERCSLLLSKSLTKPDCRVLKSLAKHMPFELAAGLNGTFWVDSGSEAHTIVICNAILNSEVMTDXXXXXXXXRLAKHMKKGLAAMD 248
BLAST of mRNA_P-fluviatile_contig8.14370.1 vs. uniprot
Match: A0A1V9Y536_9STRA (Exosome complex exonuclease RRP40 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y536_9STRA) HSP 1 Score: 249 bits (636), Expect = 5.980e-75 Identity = 129/247 (52.23%), Postives = 173/247 (70.04%), Query Frame = 3
Query: 321 ADDFLRRQELAMDPRFQATVVLPGDDVTDSTTRTTKNIRLGPGLVQHTQDKVLATRAGMLRYRPPCSFWVESNGRRYGARVEDQVLGVVEDRMGESYKVNIFGTCAALLGMLEFDGASKRSKPNLKRGSLVFCRVSAVDKDMETELTCTSTHHGSKKDWMTGQSTFGELKGGKMERCSLLLSKSLTKPNCRVLKSLAKHMPFEIAAGLNGAFWVDSGSEASTIVICNAILNSEVMTDDQTEAMVERL 1061
A++FL E ++D F VLPGDDVT + +RLG GLV + V T AG+LRYRPP +W++ N +RY A V+D V+G+V DR E Y+++I + A LGML FDGASKR++PNL+ GSLV+CRV + +KD+E LTC + H +KKDWMTG + +GEL GG + + S+ L+KSL K +C VL +L K +PFE+AAG+NG WV+SGS +TI+I NAILNSE +TD Q EAMV+RL
Sbjct: 2 AEEFLLSTEKSIDLAFTPVTVLPGDDVTKHIANLGQKLRLGAGLVAN-GSTVSCTNAGLLRYRPPNRYWIDFNHKRYVAAVDDGVVGLVVDRNAEFYRLDIGASSYATLGMLAFDGASKRNRPNLQPGSLVYCRVLSTNKDLEPALTCEAPSHMTKKDWMTGLALYGELNGGYVFKVSIGLAKSLLKDDCAVLAALGKAIPFEVAAGMNGVVWVNSGSCHNTILITNAILNSEGLTDAQIEAMVDRL 247
BLAST of mRNA_P-fluviatile_contig8.14370.1 vs. uniprot
Match: A0A1W0A9P5_9STRA (Ribosomal RNA-processing protein 40 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9P5_9STRA) HSP 1 Score: 246 bits (629), Expect = 6.060e-74 Identity = 126/253 (49.80%), Postives = 177/253 (69.96%), Query Frame = 3
Query: 321 ADDFLRRQELAMDPRFQATVVLPGDDVTDSTTRTTKNIRLGPGLVQHTQDKVLATRAGMLRYRPPCSFWVESNGRRYGARVEDQVLGVVEDRMGESYKVNIFGTCAALLGMLEFDGASKRSKPNLKRGSLVFCRVSAVDKDMETELTCTSTHHGSKKDWMTGQSTFGELKGGKMERCSLLLSKSLTKPNCRVLKSLAKHMPFEIAAGLNGAFWVDSGSEASTIVICNAILNSEVMTDDQTEAMVERLATHMKR 1079
A++FL E ++D F+ VLPGDDVT S T + +RLG GLV + +VLAT AG+LRYRPP +W++ N +RY ++D V+GV+ DR E Y+++I + A LGML FDGASKR++PNL+ GSLV+CRV++ ++++E LTC + H +KKDWMTG + +GEL GG + + S+ L+KSL K C VL +L + +PFEIA G NG WV+SG+ TI+I NAILNSE + + Q EAMV++L + KR
Sbjct: 2 AEEFLLSTEQSIDLSFKPLSVLPGDDVTTSIANTNQKLRLGAGLVA-SGTQVLATNAGVLRYRPPNRYWIDFNHKRYIPSMDDGVVGVIVDRNAEFYRLDIGASTYATLGMLAFDGASKRNRPNLQPGSLVYCRVASANQNLEPSLTCEAPSHMTKKDWMTGLALYGELNGGYVLKTSIGLAKSLLKDECVVLSALGRAIPFEIAVGFNGIIWVNSGTCQDTILITNAILNSEGLPEAQVEAMVDKLISEYKR 253
BLAST of mRNA_P-fluviatile_contig8.14370.1 vs. uniprot
Match: A0A5D6XUT6_9STRA (KH_dom_type_1 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUT6_9STRA) HSP 1 Score: 245 bits (626), Expect = 3.100e-73 Identity = 120/247 (48.58%), Postives = 171/247 (69.23%), Query Frame = 3
Query: 321 ADDFLRRQELAMDPRFQATVVLPGDDVTDSTTRTTKNIRLGPGLVQHTQDKVLATRAGMLRYRPPCSFWVESNGRRYGARVEDQVLGVVEDRMGESYKVNIFGTCAALLGMLEFDGASKRSKPNLKRGSLVFCRVSAVDKDMETELTCTSTHHGSKKDWMTGQSTFGELKGGKMERCSLLLSKSLTKPNCRVLKSLAKHMPFEIAAGLNGAFWVDSGSEASTIVICNAILNSEVMTDDQTEAMVERL 1061
A FL + ++D F TVVLPGDDVT + T+TT+ ++LG GL Q + +V+ T AG+LRYRP +WV+ N +RY A ++D V+GVV DR E Y+VNI +A LG L FDGA+KR++P+L+ G+LV+ RVS KD+E E+TC + + SKKDWMTG + +GEL GG + + S+ L+K L + +C VL +L + +PFEIA G+NG WV+S S +T ++CNAILN+E +T + + MV RL
Sbjct: 19 ATKFLEEAQRSVDFTFAPTVVLPGDDVTAALTKTTRCVKLGAGLKQLSDQRVVCTNAGVLRYRPANRYWVDYNYKRYAASLDDGVIGVVTDRNAEIYRVNIGAASSATLGALAFDGATKRNRPSLRIGALVYARVSKTHKDLEPEITCEAPANLSKKDWMTGLAVYGELSGGYVFKTSVTLAKRLLQEDCAVLAALGRRLPFEIAVGVNGVVWVNSRSSKNTTIVCNAILNAEALTASEADVMVARL 265
BLAST of mRNA_P-fluviatile_contig8.14370.1 vs. uniprot
Match: A0A6G0XI83_9STRA (Ribosomal RNA-processing protein 40 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XI83_9STRA) HSP 1 Score: 244 bits (622), Expect = 7.210e-73 Identity = 123/247 (49.80%), Postives = 170/247 (68.83%), Query Frame = 3
Query: 321 ADDFLRRQELAMDPRFQATVVLPGDDVTDSTTRTTKNIRLGPGLVQHTQDKVLATRAGMLRYRPPCSFWVESNGRRYGARVEDQVLGVVEDRMGESYKVNIFGTCAALLGMLEFDGASKRSKPNLKRGSLVFCRVSAVDKDMETELTCTSTHHGSKKDWMTGQSTFGELKGGKMERCSLLLSKSLTKPNCRVLKSLAKHMPFEIAAGLNGAFWVDSGSEASTIVICNAILNSEVMTDDQTEAMVERL 1061
A++FL E ++D F LPGDDVT T T+ +RLG GL+ Q++V+ T AG+LRYRPP +W++ N +RY V+D V+G++ DR E Y+V+I G A LGML FDGASKR++PNL+ GSL++CRV KD+E +TC + H +KKDWMTG + +GEL GG + + S+ L+KSL + +C VL +L K +PFE+A G+NG W++S S A TI+I NAILNSE + Q+EAMV RL
Sbjct: 2 AEEFLISTEKSVDLAFTPRTCLPGDDVTQHITNVTRKLRLGAGLIADDQNRVVCTNAGVLRYRPPNRYWIDFNHKRYLPSVDDGVVGMIVDRNAEFYRVDIGGAAHATLGMLAFDGASKRNRPNLQPGSLIYCRVLRAAKDLEPCVTCEAPSHLTKKDWMTGLAIYGELIGGFVFKISIGLAKSLLEDDCVVLTALGKSVPFELAVGVNGVVWLNSKSNADTILITNAILNSEGLNAAQSEAMVARL 248
BLAST of mRNA_P-fluviatile_contig8.14370.1 vs. uniprot
Match: W4FDB9_9STRA (Ribosomal RNA-processing protein 40 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FDB9_9STRA) HSP 1 Score: 244 bits (622), Expect = 7.950e-73 Identity = 120/247 (48.58%), Postives = 171/247 (69.23%), Query Frame = 3
Query: 321 ADDFLRRQELAMDPRFQATVVLPGDDVTDSTTRTTKNIRLGPGLVQHTQDKVLATRAGMLRYRPPCSFWVESNGRRYGARVEDQVLGVVEDRMGESYKVNIFGTCAALLGMLEFDGASKRSKPNLKRGSLVFCRVSAVDKDMETELTCTSTHHGSKKDWMTGQSTFGELKGGKMERCSLLLSKSLTKPNCRVLKSLAKHMPFEIAAGLNGAFWVDSGSEASTIVICNAILNSEVMTDDQTEAMVERL 1061
A++FL E ++D F+ LPGDD+T T T+ +RLG GLV T ++V+ T AG+LRYRPP +W++ N +RY ++D V+G+V DR E Y+V+I G+ A LGML FDGASKR++PN++ GSLV+CRV KD++ +TC + H +KKDWMTG + +GEL GG + + S+ L+KSL + C VL+SL + +PFE+A G+NG W++S S TI++ NAILNSE +T Q EAMV +L
Sbjct: 2 AEEFLLTAEKSIDLAFKTRTCLPGDDITQHITNVTQKLRLGAGLVATTDNRVVCTNAGVLRYRPPNRYWLDFNHKRYTPALDDGVVGMVVDRNAEFYRVDIGGSSFATLGMLAFDGASKRNRPNMQPGSLVYCRVVRAAKDLDACVTCEAPTHLAKKDWMTGLAIYGELTGGYVFKASIGLAKSLVQDECAVLESLGRAIPFELAVGVNGVVWLNSKSSQDTILVANAILNSEGLTPAQCEAMVAKL 248
BLAST of mRNA_P-fluviatile_contig8.14370.1 vs. uniprot
Match: A0A8K1CT22_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT22_PYTOL) HSP 1 Score: 243 bits (620), Expect = 2.540e-72 Identity = 129/272 (47.43%), Postives = 177/272 (65.07%), Query Frame = 3
Query: 309 GKRKADD------------FLRRQELAMDPRFQATVVLPGDDVTDSTTRTTKNIRLGPGLVQHTQDKVLATRAGMLRYRPPCSFWVESNGRRYGARVEDQVLGVVEDRMGESYKVNIFGTCAALLGMLEFDGASKRSKPNLKRGSLVFCRVSAVDKDMETELTCTSTHHGSKKDWMTGQSTFGELKGGKMERCSLLLSKSLTKPNCRVLKSLAKHMPFEIAAGLNGAFWVDSGSEASTIVICNAILNSEVMTDDQTEAMVERLATHMKRELA 1088
GKRKAD+ FL + +D F TVVLPGDDVT+ T+T+KN+RLG GL D+++ T AG+LRYRPP +WVE + +RY V+D V+GVV DR E Y+VNI + LG L FDGA+KR++P+L+ GSLV+ RV + DME ELTC ++ + +KKDWMTG S +GEL GG + + S+ L+K L + + VL++LAK + FEIA GLNG WV+S + T V+ NAILNSE M+ + + MV++L R+ A
Sbjct: 3 GKRKADEPIDATADDEASRFLEDAQRQVDFLFSPTVVLPGDDVTEILTKTSKNVRLGAGLRLLPGDRIVCTNAGVLRYRPPNRYWVEFDHKRYNVAVDDGVIGVVTDRNAEFYRVNIGAASSVTLGCLAFDGATKRNRPSLRVGSLVYARVLKTNPDMEPELTCEASANMTKKDWMTGLSVYGELTGGYVFKTSISLAKKLLQDDSYVLQALAKSIAFEIAVGLNGIVWVNSRATKHTTVVTNAILNSETMSPSEIDVMVQQLIATTSRDAA 274
BLAST of mRNA_P-fluviatile_contig8.14370.1 vs. uniprot
Match: T0R8U7_SAPDV (KH_dom_type_1 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R8U7_SAPDV) HSP 1 Score: 242 bits (618), Expect = 2.720e-72 Identity = 123/247 (49.80%), Postives = 172/247 (69.64%), Query Frame = 3
Query: 321 ADDFLRRQELAMDPRFQATVVLPGDDVTDSTTRTTKNIRLGPGLVQHTQDKVLATRAGMLRYRPPCSFWVESNGRRYGARVEDQVLGVVEDRMGESYKVNIFGTCAALLGMLEFDGASKRSKPNLKRGSLVFCRVSAVDKDMETELTCTSTHHGSKKDWMTGQSTFGELKGGKMERCSLLLSKSLTKPNCRVLKSLAKHMPFEIAAGLNGAFWVDSGSEASTIVICNAILNSEVMTDDQTEAMVERL 1061
A++FL E ++D F+ VLPGDDVT ++ +RLG GL+ + + + +T AG+LRYRPP +W++ N +RY V+D V+G+V DR E Y+++I + A LGML FDGASKR++PNL+ G+LV+CRV + ++D+E LTC + H SKKDWMTG + +GEL GG + + S+ L+KSL K +C VL +L K MPFE+AAG NG WV+S S TI+I NAILNSE + D Q EAMV++L
Sbjct: 2 AEEFLLSTEKSIDLAFKPATVLPGDDVTKHIANLSQKLRLGAGLIAN-GNAITSTNAGVLRYRPPNRYWLDYNHKRYVPAVDDGVVGLVVDRNAEFYRLDIGASSYATLGMLAFDGASKRNRPNLQPGALVYCRVLSTNQDLEPALTCEAPSHMSKKDWMTGLALYGELNGGYVFKASIGLAKSLLKDDCAVLSALGKAMPFEVAAGFNGLVWVNSSSCHDTILITNAILNSEGLPDAQVEAMVDKL 247
BLAST of mRNA_P-fluviatile_contig8.14370.1 vs. uniprot
Match: A0A485LHG2_9STRA (Ribosomal RNA-processing protein 40 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LHG2_9STRA) HSP 1 Score: 241 bits (614), Expect = 1.090e-71 Identity = 123/247 (49.80%), Postives = 166/247 (67.21%), Query Frame = 3
Query: 321 ADDFLRRQELAMDPRFQATVVLPGDDVTDSTTRTTKNIRLGPGLVQHTQDKVLATRAGMLRYRPPCSFWVESNGRRYGARVEDQVLGVVEDRMGESYKVNIFGTCAALLGMLEFDGASKRSKPNLKRGSLVFCRVSAVDKDMETELTCTSTHHGSKKDWMTGQSTFGELKGGKMERCSLLLSKSLTKPNCRVLKSLAKHMPFEIAAGLNGAFWVDSGSEASTIVICNAILNSEVMTDDQTEAMVERL 1061
A++FL E ++D F LPGDDVT T T+ +RLG GLV ++VL T+AG+LRYRPP +W++ N +RY V+D V+G++ DR E Y+V+I + A LGML FDGASKR++PNL+ GSLV+CRV KD++ +TC + H +KKDWMTG S +GEL GG + + S+ L+KSL K C VL +L +PFEIA G NG W++S + TI+I NAILNSE +T Q EAMV +L
Sbjct: 2 AEEFLVSAEKSIDLAFTPRTCLPGDDVTQHITHVTQKLRLGAGLVADNNNRVLCTQAGVLRYRPPNRYWLDFNHKRYLPSVDDGVVGMIVDRNAEFYRVDIGASSYATLGMLAFDGASKRNRPNLQPGSLVYCRVVRASKDLDPCVTCEAPSHMAKKDWMTGLSIYGELTGGYVLKASVGLAKSLLKDECVVLSALGTSIPFEIAVGFNGIIWINSKTNQDTILITNAILNSEGLTPAQNEAMVLKL 248 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14370.1 >prot_P-fluviatile_contig8.14370.1 ID=prot_P-fluviatile_contig8.14370.1|Name=mRNA_P-fluviatile_contig8.14370.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=331bp MDEASNSDEDAPETMSSNTTTAASMVAARAAKTRKRPSGGSSRSEADSDGback to top mRNA from alignment at P-fluviatile_contig8:804794..809169+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14370.1 ID=mRNA_P-fluviatile_contig8.14370.1|Name=mRNA_P-fluviatile_contig8.14370.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4376bp|location=Sequence derived from alignment at P-fluviatile_contig8:804794..809169+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:804794..809169+ >mRNA_P-fluviatile_contig8.14370.1 ID=mRNA_P-fluviatile_contig8.14370.1|Name=mRNA_P-fluviatile_contig8.14370.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1986bp|location=Sequence derived from alignment at P-fluviatile_contig8:804794..809169+ (Porterinema fluviatile SAG_2381)back to top |