mRNA_P-fluviatile_contig8.14368.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14368.1 vs. uniprot
Match: D8LG39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG39_ECTSI) HSP 1 Score: 340 bits (871), Expect = 1.260e-98 Identity = 472/924 (51.08%), Postives = 514/924 (55.63%), Query Frame = 1
Query: 457 WRDIQEGEPQEGDXXXXXXXXXXXXXXXXXXXXXXX----VVRDVLAASVSSMGKSSSGLKGLKSSLLREDGDTADTRPHYPPAAGRTSASNKGHGPKWGGRAAVEGEGGGRGLWDEASAGDVGALAAALAPGGGGDVHACNSDGWTALHSAAHAGHGAPIISLLLGFGASTASVSRRGYTPLHLACMRGRWYAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPDAWGRDPAAVAKQLDRAGPLQLLKAXXXXXXXXXXXXXXXXXXKIFPVAPATXXXXXXRDASSGDAITPGAAAPAALADDQEEADEG-EDLQVERAVV------TAVVVGKRWVVMNESGRMLERRSGKVALFKSMAAAVDWANGL----EITSGSFQVAEVAPAMRKTFENEVAFEMTGCGTASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAWTAPAQRRDEDQARADVAATAKKLRDVSEEAAMHREKAESLERALEAVLKEYDELAEAAAAAVAGG------------------------REAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGRQSESSPESVTTDAEPDVCAAXXXXXXXXXXXXARSLLLGVDAVADTVDVVXXXXXXXXXDDPPEQSSPALSVAFG-------------------------------------------------------------------------EAGERGVAQVAEHPALDIANGNIGGDEGDHKSGEISSNRSDSGRRXXXXXXXXXXXXXXXXEEAAVERLTTWLMELMIRKRDAARYARSLVVDGFDSGEALRGVREEELVQYGMKKGHARFVVTSL 2892
WRDIQEG + GD VVRD LAA VSS+GKSSSGLKGLK+SLL+EDGDT PP RT AS+ G P G + GRGLWDEA+AGD+ ALAAAL PGG GDVHACN DGWTALHSAAHAGHG +ISLL+G GAS ASV+RRGYTPLH ACMRGRW++A+A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PPDAWGRDPAAVA+QLDRAGPL+LL+A XXXXXXXXXXXXXXXXX XXXXXX EG +D + ER + VVG RWVVMNESGRMLERRSGKVALFKSMAAAVDWANGL EITSGSFQVAEV P MRK FE EV FE+TG GT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ED+ARA VAATA +LR+ +EA MHR+KA SLERALEAVLKE D++ +AA AA A G A A XXXXXXXXXXXXXXXXXXXXXXXX G + E+ P S + A A S G + + X D EQS+ S G + +G A A LD G + GD S S+ G XXXXXX E A VERL WL L IR+ DA+RYA LV DGFDS EALRGVREEEL+QYGMKKGHAR VV L
Sbjct: 2 WRDIQEGSLRGGDYGEGSGRGFSGESGSRATASAANAGVGVVRDALAAGVSSVGKSSSGLKGLKTSLLKEDGDT------IPP---RTLASDAGASPAAGNK--------GRGLWDEAAAGDLAALAAALTPGGEGDVHACNGDGWTALHSAAHAGHGLAVISLLVGSGASPASVARRGYTPLHSACMRGRWHSAAALLALGADANVRADDQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHFPPDAWGRDPAAVARQLDRAGPLKLLEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--EGVDDEEAERVIGEGGQKGATAVVGNRWVVMNESGRMLERRSGKVALFKSMAAAVDWANGLTLDREITSGSFQVAEVVPDMRKAFEKEVLFEITGGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----EDEARAMVAATANRLREAQQEADMHRQKAASLERALEAVLKECDDIVKAAEAAGARGLAEVSATGEEXXXXXXXXXXGCPVSTAAADAAAAPSMLLGVDSPAAGSSDAXXXXXXXXXXXXXXXXXXXXXXXXLNFDGGDGEEEARPTSPSPSAGAGAPACGEPEPAEGTEGAESS---GSEEGSSXXXXXXASDEEAQLDSSSEQSAAEPSTILGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASAIXXXXXXXXXXXXXXAEASASXXXXXXXXXXQSRQQPSPQGEAGGAGSSLLDF-----GDNTGDQHSTTASAANGTGGNXXXXXXX----------EAAVVERLAAWLSGLKIREPDASRYAGRLVADGFDSEEALRGVREEELLQYGMKKGHARLVVRLL 884
BLAST of mRNA_P-fluviatile_contig8.14368.1 vs. uniprot
Match: A0A6H5JAE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAE9_9PHAE) HSP 1 Score: 156 bits (394), Expect = 1.170e-36 Identity = 237/524 (45.23%), Postives = 266/524 (50.76%), Query Frame = 1
Query: 1591 MNESGRMLERRSGKVALFKSMAAAVDWANGL----EITSGSFQVAEVAPAMRKTFENEVAFEMTGCGTASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAWTAPAQRRDEDQARADVAATAKKLRDVSEEAAMHREKAESLERALEAVLKEYDELAEAAAAAVAGG-REAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGRQSESSPESVTTDAEPDVCAAXXXXXXXXXXXXARSLLLGVDAVA----------------------------DTVDVVXXXXXXXXXDDPPEQSSPALSVAFG-----EAGERGVAQVAEHPALDI-ANGN--IGGDEGD------------------------------HKSGEISSNRSDSGRRXXXXXXXXXXXXXXXXEEAAV-------------------ERLTTWLMELMIRKRDAARYARSLVVDGFDSGEALRGVREEELVQYGMKKGHARFVVTSL 2892
MNESGRMLERRSGKVALFKSMAAAVDWANGL EITSGSFQVAEV P MRK FE EV FE+TG GT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +ARA VAATA +LR+V EEA MHR+KA SLERALEAVLKE D+L +AA A A G E A XXXXXXXXXXXXXXXXXXXXXXX G G S+ + T +AEP + + S G A A + +D D EQS+ S+ G G+ G A P+L + A+G G E +S + SS + ++G AAV +RL TWL L IR+ DA+RYA LV DGFDS EALRGVREEEL+QYGMKKGHAR VV L
Sbjct: 1 MNESGRMLERRSGKVALFKSMAAAVDWANGLTLDREITSGSFQVAEVVPDMRKAFEKEVLFEITGGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----EARAIVAATANRLREVQEEADMHRQKAASLERALEAVLKECDDLVKAAEAGGARGLAEVSATGEEXXXXXXXXXXXXXXXXXXXXXXXPSMLLGVDSPGADSDASPPLLLLGEGDPSQQA----TGEAEPSLLNFDGNDGEEEAHPTSPSPSAGTSAPACGEPEPAGGTEGAESSGSEEGSFCGEDDEALD------EEAQLDSSSEQSAAEASMLLGVDDDAADGDSGNRDAASAPSLLLGADGPDAAGSSEASAXXXXXXXXXXXXXAAEAXXXXXXXXXXXXXRSRQQSSPQGETGGAGSSLLDFGDETGDQHTTSAAVANGTGGNDGAEDGGEAVVVQRLATWLSGLKIREPDASRYAGRLVADGFDSEEALRGVREEELLQYGMKKGHARLVVRLL 510 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14368.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14368.1 >prot_P-fluviatile_contig8.14368.1 ID=prot_P-fluviatile_contig8.14368.1|Name=mRNA_P-fluviatile_contig8.14368.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=972bp STCYARSNLSGSRGGGCADSMDFAPDTPTTGYERYVSENESTDGEGDISGback to top mRNA from alignment at P-fluviatile_contig8:787454..796506+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14368.1 ID=mRNA_P-fluviatile_contig8.14368.1|Name=mRNA_P-fluviatile_contig8.14368.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9053bp|location=Sequence derived from alignment at P-fluviatile_contig8:787454..796506+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:787454..796506+ >mRNA_P-fluviatile_contig8.14368.1 ID=mRNA_P-fluviatile_contig8.14368.1|Name=mRNA_P-fluviatile_contig8.14368.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5832bp|location=Sequence derived from alignment at P-fluviatile_contig8:787454..796506+ (Porterinema fluviatile SAG_2381)back to top |