mRNA_P-fluviatile_contig8.14365.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14365.1
Unique NamemRNA_P-fluviatile_contig8.14365.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:765559..769957 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size601
Cds size591
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14365.1prot_P-fluviatile_contig8.14365.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 765559..769947 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817215.2459083-CDS-P-fluviatile_contig8:765558..7660471622817215.2459083-CDS-P-fluviatile_contig8:765558..766047Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 765559..766047 -
1693571533.2898197-CDS-P-fluviatile_contig8:765558..7660471693571533.2898197-CDS-P-fluviatile_contig8:765558..766047Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 765559..766047 -
1622817215.259986-CDS-P-fluviatile_contig8:769845..7699471622817215.259986-CDS-P-fluviatile_contig8:769845..769947Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 769846..769947 -
1693571533.2980127-CDS-P-fluviatile_contig8:769845..7699471693571533.2980127-CDS-P-fluviatile_contig8:769845..769947Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 769846..769947 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817215.2721884-UTR-P-fluviatile_contig8:769947..7699571622817215.2721884-UTR-P-fluviatile_contig8:769947..769957Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 769948..769957 -
1693571533.307955-UTR-P-fluviatile_contig8:769947..7699571693571533.307955-UTR-P-fluviatile_contig8:769947..769957Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 769948..769957 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14365.1

>prot_P-fluviatile_contig8.14365.1 ID=prot_P-fluviatile_contig8.14365.1|Name=mRNA_P-fluviatile_contig8.14365.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=197bp
MATEAEMRVLGGHKLRHERRDTSTWDWVESGDDESIAGRILHRQQQQQQQ
EQLLPRWQAVRTRPLPPPLDPHRGDLLIQDEQRRQRQHQHQRYRHRSGQD
EGEERDSSGDETSAAATSTASAGNTRSTNHEESGGSGGGSGGGNVTRWRN
WASAGALRGDGSSDDSVSTKKRQQQQEQHRRSSNNIRCEYRSSLWS*
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mRNA from alignment at P-fluviatile_contig8:765559..769957-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14365.1 ID=mRNA_P-fluviatile_contig8.14365.1|Name=mRNA_P-fluviatile_contig8.14365.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4399bp|location=Sequence derived from alignment at P-fluviatile_contig8:765559..769957- (Porterinema fluviatile SAG_2381)
CTCGCAACTCATGGCGACAGAAGCGGAGATGCGAGTCCTTGGCGGGCATA
AACTTCGCCATGAACGGAGGGATACGTCGACGTGGGACTGGGTGGAAAGC
GGGGACGACGAGGTCAGTGCATCATTGAGCAAGGGCATTCTCAACTGCCC
TTCCCTTCCTGCACACACACGTGCACACACAGCGAATGCACGCGCGGTGT
TTGACCAGAGTGGCACAAGCGGGGCCACTTTACTCTGCTCTTTTGCCTAA
AGCCGAGTATGGCCTCTCAAATCCGCAGTCGAAGCAGCTGCATCCATCTC
GGCTCTCCGTTCAGTGTAGATTCGAACGCGGCTGTGCAGGTCTGTGCGCG
GAACGGATCTCGCGCACACAAGGCGATCATCCGCGCCTATGTTCCACACT
TCCCCTCCGGTCCTGCTCATAACCATTTGTCGGCGCATCTCACAGCAGCT
TGCCTCGTCTGAGTCGTTGTGCTGAGGGCCATGTCGGATGACAACAAGAG
CTCGCTCGCCACCCTCTTCGGGAGTGCTGTTGTGCGGTCCTGCGAGAACG
GTTGCCAAAAACCTGAGAACCCTCCTCCATGAATAGCATTGCACACCTGT
TGAGCCCATTCCAGCAGCCACCATGACGGCGTGAAACCCCTTTGGATGCG
GGCGTGCATTGTGTGACGATGGGTACGCAAAAAAGTTGCCCACGTGCGCA
GTAGAAAATCAATGACCGCACAACCTTGCGTCGCAAATCGACGGGATTGC
CGTTAGGTCGGTTTCAGCCTCTTCGTGGCACGTAGTCCGTCATCATCAGA
GTCTACAGCACAAGTGCCTCATGAGCTTTACACGCCTTCGCCTTCGTCCA
GTTGCTCGATGTAGTAACTCTGTGTACCTGTCTAGCGCTTGCTATCAACA
TAGTTTTGGGAGTTCGCAAAGGTGCCGAGACTCTCCCCCTCCATGCTCTT
CCTCTCATCCCCCCCCCCCCTTCCTCGGTACCGAGTAGATGGAGGGAAGG
GGTGGTGGTGAACCTATTTAAGAAAGGAGATAAGACTGACCCAGGAAACT
ATAGGGGAATCACCCTGTCGAGCACAGTGGGGAAAGTGTTCTTCAAGATC
CTCAACAACAGAATAGTACGAGTACTGGAGATGGAAAAGAGAATTAGTGA
GGGTCAAGCAGGTTTCAGGGAGGCTAGGGGGTGTGGAGATCACCTATACA
CGGTAGGGAGAATCATACAAGGTCGGAAGAGGGTGGGAAAGCCGACATAT
TGATTTTTTCCTAGACGTTCAGAAAGCGTATGATACAGTATGGAGAAATG
GGCTCTGGAAAAAGTTGGCGAAGTATGGGATAAACGGGAAGATGTGGAGA
ATGATTAAGAAGATGACAGAGAGCACGAAAAGCGCCGTGATGTTAGATGG
AGAACTCTCGAGGTTCTTCGACATTGAGCAGGGGGTCCCACAGGGTGCAC
AATGTCCCCAACGTTGTTCCAGGTATTCATCAACGACTTACTGAAAGAGG
TAGAGGCGGTAGGGAAGGGAGTAGAAGTAGGGGAAACCTCGGTATCGGGA
CTGCTATTTGCTGACGACTTTGTTGGGATGTCGGACACGCCTGAGGGCTC
CAACTACAGATTAACGCAGCGAAGACCTACGCTGATAAGTGGAGATTCTC
GGCCAACGTCCCAAAGTGTGCCGTAATGGTATGCAATGAAGATGGTGACG
AGGAAGTAGGTACCAAGTGGACGTGGGGGACAAGGAGCTGCCAAGAGTGG
AAAAATACACATACCTTGGAGTAGAGATAGCAAAGGACTGTAAATGGGAT
GCACACATGCACAAAATGGCGGACAAGGGCAAAGCAAGGGCAGGGAAGTT
GCACCCAATCCTAGCAGACCGGCACCTTGATACACGCGTCAAAATGACCA
TTCTGAAAAGTGTTATCATCCCGCCACTAGAGTACGCGGGAGAAGTTTGG
GAAGGAACAAGAAAATAGTAGCAGAGTTGGAGGCAGCGCAGATGAAAGCA
GCGAAGATCATTCTAGGATGCTCCCAGCGCACAAGTAACGCAGCAGTAAG
AGCAGAGTTGGGGATCTACTCCTTAAGAACGGGAAGAGACAGGAGGAAGT
TGACATGGCAATACCGTTTGGAAAACATGGGAAAGGAGAGGTTACCGAGA
ATAGCTTGGGAGGCGAGATGGGTAAACAAGGCCAGGGGTAGACAACTCAT
TGAGTGGGCTAAGGTTGTACAGGGAGTGTGGAGGGGTTAGATATTGACGA
ACGGGAGACGACGGGGCGGAAAGCTTAGAAGGGTACAAGAAGAGCATCTC
AGAAGCCTTTGGAAATAGAGAAGACCAAAGCTTGCGGAAAGAGACCAAGG
AAAAGGAGGTTCTAGAAGTGTACGGAAGGCTGAACGAAGGAATAGGGTTC
AAGGAGTACCTGAACGGACCATGGGATGAAGGGACAAAGATGAAGGTCAA
ATTTAGAACGGGCGACATTGACCTACGGGAACGTAGAAGGAGGTTTAGGA
AGGTAGACGACGACGAAGACAAGTTCAAATGTGACTGCGGCGCCGAATGC
GAAGACCGGGTACATGTAGTTGCGGAATGCCCGTTGTACGATCAGGAGAG
AGAAGGGTACATCGTTGAGCTGGAAAAAGTAGACAGTCGGTATAGAGAGA
AGTTTGAGGCATGGAACAAAGAGGAGAAGACGGTAGCGGTACTCGGGTGT
AAGATGTGGCCCAGGACGGACAGTAGACAGGTTAGGGAAAACATTTTTGA
GCCACCTTTGGCAAAGTAGGAAGGAACGATTGGCCATCGGTGGTCGATCG
TGCGGGAACAATGCTCCGTCCTCTCGAGGACGCGTGGTCAATGGTCTAAC
AACTAAGGCATGCAAAACATGAGTACGCCCCCCCCCCTTCCTCGGTACAT
GTAGTTGCGGAATGCCCGTTGTACGATCAGGAGAGAGAAGGGTACATCGT
TGAGCTGGAAAAAGTAGACAGTCGGTATAGAGAGAAGTTTGAGGCATGGA
ACAAAGAGGAGAAGACGGTAGCGGTACTCGGGTGTAAGATGTGGCCCAGG
ACGGACAGGTATAAAGTAGACAGGTTAGGGAAAACATTTTTGAGCCACCT
TTGGCAAAGTAGGAAGGAACGATTGGCCATAGGTGGTCGATCCTGCGGGA
ACAATGCTCCGTCCTCTCGAGGACGCGTGGTCAATGGTCTAACAACTAAG
GCATGCAAAACATGAGTACGCCCCCTTCCTCGCATTCGTGGCCGACTACC
TTCCAGCTTCTCCAAAAGGAGAAAGTTACCGTAAGTCTTTGCCTTACATT
GGTACCGGTTTTCCATTTCAAAGCTTTCTTGATCTGCGAAATTTCTCGCC
TGGAATCGCTTGCCCTCGCCGCGTTTGAACGAACACAGGAGGCAAGCGCC
GATGTGTGACAACAGCTCGAGCTTGCCAGAGCACGTGATCTGTCAGATTC
TTGTTTGGTTTTATTTCGATTTTCGGTAAAGCTTGCGCGGTAGCAATCAG
TTCGAACGCCTCAGCACCGGATGCAACAGTGCAGGATGGGGAGGGGAGGT
GAGCGGGAGGCGCGGCTGCTTATGTAGCGCAAGTCCCTTGGTTTCAGGAA
CGCCGAGTACGCTGCTGCTTAAGAGAGAAACACGCTCCGCCAGCCATGTG
CAGACTTTTGTCCGTTCAGCAACCAATCCTTGATGGTCCCGTTGAGTTTT
GTCTCGCGCGGGGAGGGAGTGCTGTTTCACGAGGCGGGACTGACCGTGTG
ACTTCTGTGCCTCCATGCAATCTCGAACGCCCTACAGATGAGTCTTGCGA
TTGATTCCGTCGTACCTTGTCCCTCCCGCTCCGCTTTACCCTCCCCACCG
CAATAAAAAAAACATCCAAAACACCGCGTGAATTCATTGCATCATGGCAT
CCGGGTGAAGTCGATTGCCGGGAGAATTTTGCATCGGCAGCAACAGCAGC
AGCAGCAGGAGCAGCTGCTGCCGAGGTGGCAAGCGGTCCGAACTAGGCCG
CTGCCGCCGCCGCTAGATCCTCACCGCGGAGATCTACTGATTCAGGACGA
GCAGCGCCGGCAACGGCAGCACCAGCACCAGCGGTATCGGCACCGCAGCG
GGCAAGACGAAGGAGAAGAGCGAGACAGTAGCGGCGACGAAACCTCCGCC
GCTGCCACGTCCACCGCAAGCGCCGGCAACACCCGCAGCACCAACCATGA
GGAAAGTGGCGGTAGCGGCGGTGGCAGCGGCGGCGGCAACGTTACGCGGT
GGCGGAATTGGGCATCGGCGGGAGCTCTGCGCGGCGATGGCAGCAGCGAT
GACAGTGTTTCTACAAAGAAGAGGCAGCAGCAGCAGGAGCAGCACCGCCG
CAGTAGCAACAATATCAGGTGTGAGTATCGAAGCTCGCTGTGGTCCTGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:765559..769957-

>mRNA_P-fluviatile_contig8.14365.1 ID=mRNA_P-fluviatile_contig8.14365.1|Name=mRNA_P-fluviatile_contig8.14365.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1182bp|location=Sequence derived from alignment at P-fluviatile_contig8:765559..769957- (Porterinema fluviatile SAG_2381)
ATGGCGACAGAAGCGGAGATGCGAGTCCTTGGCGGGCATAAACTTCGCCA
TGAACGGAGGGATACGTCGACGTGGGACTGGGTGGAAAGCGGGGACGACG
AGATGGCGACAGAAGCGGAGATGCGAGTCCTTGGCGGGCATAAACTTCGC
CATGAACGGAGGGATACGTCGACGTGGGACTGGGTGGAAAGCGGGGACGA
CGAGTCGATTGCCGGGAGAATTTTGCATCGGCAGCAACAGCAGCAGCAGC
AGGAGCAGCTGCTGCCGAGGTGGCAAGCGGTCCGAACTAGGCCGCTGCCG
CCGCCGCTAGATCCTCACCGCGGAGATCTACTGATTCAGGACGAGCAGCG
CCGGCAACGGCAGCACCAGCACCAGCGGTATCGGCACCGCAGCGGGCAAG
ACGAAGGAGAAGAGCGAGACAGTAGCGGCGACGAAACCTCCGCCGCTGCC
ACGTCCACCGCAAGCGCCGGCAACACCCGCAGCACCAACCATGAGGAAAG
TGGCGGTAGCGGCGGTGGCAGCGGCGGCGGCAACGTTACGCGGTGGCGGA
ATTGGGCATCGGCGGGAGCTCTGCGCGGCGATGGCAGCAGCGATGACAGT
GTTTCTACAAAGAAGAGGCAGCAGCAGCAGGAGCAGCACCGCCGCAGTAG
CAACAATATCAGGTGTGAGTATCGAAGCTCGCTGTGGTCCTGATCGATTG
CCGGGAGAATTTTGCATCGGCAGCAACAGCAGCAGCAGCAGGAGCAGCTG
CTGCCGAGGTGGCAAGCGGTCCGAACTAGGCCGCTGCCGCCGCCGCTAGA
TCCTCACCGCGGAGATCTACTGATTCAGGACGAGCAGCGCCGGCAACGGC
AGCACCAGCACCAGCGGTATCGGCACCGCAGCGGGCAAGACGAAGGAGAA
GAGCGAGACAGTAGCGGCGACGAAACCTCCGCCGCTGCCACGTCCACCGC
AAGCGCCGGCAACACCCGCAGCACCAACCATGAGGAAAGTGGCGGTAGCG
GCGGTGGCAGCGGCGGCGGCAACGTTACGCGGTGGCGGAATTGGGCATCG
GCGGGAGCTCTGCGCGGCGATGGCAGCAGCGATGACAGTGTTTCTACAAA
GAAGAGGCAGCAGCAGCAGGAGCAGCACCGCCGCAGTAGCAACAATATCA
GGTGTGAGTATCGAAGCTCGCTGTGGTCCTGA
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