mRNA_P-fluviatile_contig8.14361.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14361.1 vs. uniprot
Match: D8LG48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG48_ECTSI) HSP 1 Score: 335 bits (860), Expect = 6.500e-102 Identity = 167/223 (74.89%), Postives = 191/223 (85.65%), Query Frame = 3
Query: 3513 MIPAQLLDAHMQLDKRKALNVIVLCMAVLTVCFFVFACVVSSNANAGFNVVLTALIYAAYAGLLATFFNKKRSVDQGLDASMAIEPMAGGVLIGLTTMMCFLSLMTAVYWGQMSGCEDDTGDVEGYSCYHAWGMAAVAWFASFLLVAEFAVLAALILWKEDIFFVDGGYDNFDAQEDRGAYNSSAYAYDGVTFGAGGIGGG---------DGDMRGVPQEADL 4154
MIPA +DAHMQLDKRK+LN +VL MAVLT+CFF+ ACVVSSNANAG NVVLTA++Y AY GLLA FN+KR+ D G+D +MAIEP+ GG LIG+TTMMCFLSLMTAVYWGQMSGCEDDT DV+GYSCY+++GMAAVAWFASFLL++E LAALILWKED+FFVDGGYDNFDAQEDRGAY+SSAYAYDG TFG GG+GGG +GD GVPQ+ADL
Sbjct: 1 MIPAPFIDAHMQLDKRKSLNTVVLAMAVLTICFFICACVVSSNANAGLNVVLTAMMYVAYVGLLAVVFNRKRATDGGMDTAMAIEPIVGGGLIGITTMMCFLSLMTAVYWGQMSGCEDDTDDVDGYSCYNSFGMAAVAWFASFLLISEAVTLAALILWKEDMFFVDGGYDNFDAQEDRGAYSSSAYAYDGATFGTGGMGGGLXXXXXXXXNGDDDGVPQQADL 223
BLAST of mRNA_P-fluviatile_contig8.14361.1 vs. uniprot
Match: D8LG47_ECTSI (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG47_ECTSI) HSP 1 Score: 316 bits (810), Expect = 3.270e-87 Identity = 266/573 (46.42%), Postives = 306/573 (53.40%), Query Frame = -3
Query: 1 EILKGLGNYGLGVDGGPLTKDEIEEERDDDGSEDEDYGSGGELDADAEENDRAIWRESFGEEMPAGVAGGTWIDMKAVRDKDMREEFASSIAPFALLWSTLSEWVTPATRAVCLAGRSAAIDFE---------SALMGXXXXXXXXVCXXXXXKEVGAAAQP---PAMAATPHAEATEEGEGHDGTSGSISNGGHRNRRRFFPADFQARKAGAVAKAIEAVASRHTRNNWGRGKTEKRDGEAGNPGDHCRGSDRGGRDGGSEGLTFTGALRHSAVSAMVNMHLVQAERALRIAAEVIADSSAGGCDHGNGAGESGRRGIPNAGIRCDNARTRKKWTWSDTAATARQGSRVPGGWVVEXXXXXXXXXXXXXASAVPLKVPPALVAAKVLEKNG--TPDGI--------TPGRRRREGAAADVDARPERPEIKRGRKKASEHPEAERAAENFTAPGLATRTAAAESVSVGGAESRRAVAMVIDTLDA--GSASAA--ANLSIAQWKIVSLVLLTAVGLGAREAGAGVGVVAGAE-AGRVGSAETAGAEEACLRLFGPETVVTAREFRILVEVLLE 1638
E KG YGLGVDGGPLT DE+E+E+ D AIWRE+FGEEMPA V+ G+WIDM AVRDK+MREEFASSIAPFALLWS LSEWV+P TRAVC AGR+A S L V + AA+P PA+ + +E+G D + S ++ GH PADFQARKAGAVA+AIEA SRH + N R K D GD C RGG EG T TGALRH+ VS MVNMHL QAERAL AA + GG GR GI + +N +RKKW WSD A ARQG+RVPGGWV E A AVPLK PPA V + NG T D + T R E A A+ + R GR+ E P AE AA AA E V+ GGAE RRAVA VIDTL+A GSAS+A A+LSIAQWK+VS+VLLTAVGLGA G A V E A EAC RL G E V+AREFRILV+V+LE
Sbjct: 347 EEAKGAREYGLGVDGGPLTADEVEDEK-------------XXXXXXXXXXDGAIWRETFGEEMPAEVSSGSWIDMDAVRDKEMREEFASSIAPFALLWSALSEWVSPETRAVCQAGRAAXXXXXXXXXXXXXXSPLPSAGKAKTGGVNGRSLSEIGDVAAEPAGSPAITGASCCDVSEQGPRIDSSHSSSASPGHLGP---VPADFQARKAGAVAEAIEAEMSRHAKRNRDRRKANANDSPNKGTGDSCA---RGGGATVGEGPTLTGALRHTGVSTMVNMHLAQAERALIAAAPTL--HVRGGXXXXXX--XXGRSGILQTSGQHNNVGSRKKWIWSDKATGARQGARVPGGWVEEEGATAAAAAVA--AEAVPLKAPPA---GGVCKANGETTGDDVPAVATASGTGTTARGENADAETNQRESSAVALEGRQ-TREAPAAEPAA----------AAAAGEHVAGGGAECRRAVAAVIDTLNAAVGSASSATAADLSIAQWKVVSVVLLTAVGLGAGAIGXXXXXXXXXXXAPGVTGEEAEVAAEACARLCGAEMGVSAREFRILVDVMLE 880
BLAST of mRNA_P-fluviatile_contig8.14361.1 vs. uniprot
Match: A0A6H5K2G0_9PHAE (RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2G0_9PHAE) HSP 1 Score: 295 bits (754), Expect = 2.750e-78 Identity = 261/574 (45.47%), Postives = 308/574 (53.66%), Query Frame = -3
Query: 1 EILKGLGNYGLGVDGGPLTKDEIEEERD-DDGSEDEDYGSGGELDADAEENDRAIWRESFGEEMPAGVAGGTWIDMKAVRDKDMREEFASSIAPFALLWSTLSEWVTPATRAVCLAGRSAAIDFESAL------MGXXXXXXXXVCXXXXXKEVG-AAAQP---PAMAATPHAEATEEGEGHDGTSGSISNGGHRNRRRFFPADFQARKAGAVAKAIEAVASRHTRNNWGRGKTEKRDGEAGNPGDHCRGSDRGGRDGGSEGLTFTGALRHSAVSAMVNMHLVQAERALRIAAEVIADSSAGGCDHGNGAGESGRRGIPNAGIRCDNARTRKKWTWSDTAATARQGSRVPGGWVVEXXXXXXXXXXXXXASAVPLKVPPALVAAK----------VLEKNGTPDGITPGRRRREGAAADVDARP-ERPEIKRGRKKASEHPEAERAAENFTAPGLATRTAAAESVSVGGAESRRAVAMVIDTLD--AGSASAA--ANLSIAQWKIVSLVLLTAVGLGA--REAGAGVGVVAGAEAGRVGSAETAGAEEACLRLFGPETVVTAREFRILVEVLLE 1638
E K +GLGVDGGPLT DE E+E++ ++ ENDRAIWRE+FGEEMPA V+ G+WIDM AVRDK+MREEFASSIAPFALLWS LSEWV+P TRAVC AGR+A + E+G AA+P PA+ A + +E+ D + S ++ GH PADF ARKAGAVA+AIEA SRH + N R K D GD S RGG EG T TGALRH+ VS MVNMHL AERAL IAA G G SG I + +N R+RKKW WSDTAA ARQG+RVPGGWV + XXXXXXX AK V +GT ++ G AD + E P I ++ + P AE AA AA E V+ GGAE RRAV+ VIDTL+ AGSAS+A A+LSIAQWK+VS+VLLTAVGLG GA A RV E A EAC RL G E V+AREFRILV+V+LE
Sbjct: 602 EEAKDAREFGLGVDGGPLTADEFEDEKEMEEVXXXXXXXXXXXXXXXXXENDRAIWRETFGEEMPAEVSSGSWIDMDAVRDKEMREEFASSIAPFALLWSALSEWVSPETRAVCRAGRAAXXXXXXXXXXXXXPLSSAGKAKTSGVNGRSSSEIGDVAAEPASSPAITAASCCDVSEQSPRIDSSHSSSASPGHFGS---VPADFLARKAGAVAEAIEAEMSRHAKRNRDRRKANPNDSPMKGTGDS---SARGGGTTVGEGPTLTGALRHTGVSTMVNMHLALAERAL-IAAATTLHVRGGXXXXXXXXGCSG---ILQTSGQHNNMRSRKKWVWSDTAAGARQGARVPGGWVEKEGPTAAXXXXXXXXXXXXXXXXXXXXKAKEGTTGDDVPAVATASGTGTTVS-------GKHADAETNQRESPAISVAGRQTGKAPAAEPAA----------AAAAGEHVAGGGAECRRAVSAVIDTLNVAAGSASSATAADLSIAQWKVVSVVLLTAVGLGTGXXXXXXXXXXXXGAAAPRVTGEEAEVAAEACSRLCGEEMGVSAREFRILVDVMLE 1148
BLAST of mRNA_P-fluviatile_contig8.14361.1 vs. uniprot
Match: A0A835YPK3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPK3_9STRA) HSP 1 Score: 138 bits (348), Expect = 5.620e-33 Identity = 85/190 (44.74%), Postives = 111/190 (58.42%), Query Frame = 3
Query: 3531 LDAHMQLDKRKALNVIVLCMAVLTVCFFVFACVVSSNANAGFNVVLTALIYAAYAGLLATFFNKKRSVDQGLDASMA----------------IEP------MAGGVLIGLTTMMCFLSLMTAVYWGQMSGCEDDTGDVEGYSCYHAWGMAAVAWFASFLLVAEFAVLAALILWKEDIFFVDG--GYDNF 4028
+D + +K++A+NV++L A CFFV ACVV+ NANAGFN+VLTAL+Y A+A A + + GL A +A +EP MAGGV IG T+ + LSL TAVYWG+MSGC V GYSCY A GM A + FA+ LLV E + AAL+ WK+ +F DG GY+ F
Sbjct: 1 MDVLGEAEKKQAINVVLLAQAACAGCFFVCACVVARNANAGFNIVLTALLYIAHALYTAYVVGR----ESGLHALLANLGSGXXXXXXXAHGLVEPSSTSRLMAGGVAIGTTSALTLLSLTTAVYWGRMSGCTAGVSGVAGYSCYAAGGMRAASAFAALLLVCEALLAAALVAWKDALFAADGLDGYEGF 186
BLAST of mRNA_P-fluviatile_contig8.14361.1 vs. uniprot
Match: W7TS32_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS32_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 9.470e-19 Identity = 60/179 (33.52%), Postives = 96/179 (53.63%), Query Frame = 3
Query: 3531 LDAHMQLDKRKALNVIVLCMAVLTVCFFVFACVVSSNANAGFNVVLTALIYAAYAGLLATFFNKKRSVDQGLDASMAIEPMAGGVLIGLTTMMCFLSLMTAVYWGQMSGCEDDTGDVEGYSCYHAWGMAAVAWFASFLLVAEFAVLAALILWKEDIFFVDGGYDNFDAQEDRGAYNSSA 4067
+D LD K + ++ V +C+ + + VV+S AN GFN VLTAL+Y Y + T+ +RS P+A G ++G++ M+ FLSLMTA++WGQ++ C D++ YSC + +A FA+ L + + +AL+LW+++ YD D GA +SSA
Sbjct: 1 MDQLGDLDHEKLITAGLVTQGVFVLCYTICSFVVASTANMGFNAVLTALLYIFY--VAGTYHVLQRSK----------MPLAVGFVLGVSVMITFLSLMTAIFWGQLANCSPGYYDIKRYSCTNRSAYSATCAFATLLFLVQLVFTSALVLWRDEFIQDSSAYD--DIHGAGGASSSSA 165
BLAST of mRNA_P-fluviatile_contig8.14361.1 vs. uniprot
Match: A0A7S1TNM9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNM9_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 1.360e-18 Identity = 68/195 (34.87%), Postives = 100/195 (51.28%), Query Frame = 3
Query: 3531 LDAHMQLDKRKALNVIVLCMAVLTVCFFVFACVVSSNANAGFNVVLTALIYAAYAGLLATFFNKKRSVDQGLDASMAIEPMAGGVLIGLTTMMCFLSLMTAVYWGQMSGCEDDTGDVEGYSCYH--AWGMAAVAWFASFLLVAEFAVLAALILWKEDIFFVDGGYDNFDAQED-----RGAYNSSAYA-YDGVTF 4091
+D + K LNV + A+ + + + VV++ ANAGFN VLTA++ + N+ +S +A G +IG++TMM FL LMTAV+WGQ+SGCED D + YSC + A+G FLL F +L L+LW++D GYD+ GA +++AYA YD T+
Sbjct: 1 MDLLGNAEHGKLLNVNLALQALFSFALLICSFVVAATANAGFNAVLTAILSCTFVVGAYRVLNRSQST------------LAVGFVIGVSTMMSFLMLMTAVFWGQLSGCEDVKDDPDQYSCDNKKAYGATCAMSVLLFLLDVSFTIL--LVLWRDDFMSESSGYDDIGGNSAFVNNAPGAADANAYAAYDSSTY 181
BLAST of mRNA_P-fluviatile_contig8.14361.1 vs. uniprot
Match: A0A7S2V692_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V692_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 3.160e-18 Identity = 65/195 (33.33%), Postives = 96/195 (49.23%), Query Frame = 3
Query: 3531 LDAHMQLDKRKALNVIVLCMAVLTVCFFVFACVVSSNANAGFNVVLTALIYAAYAGLLATFFNKKRSVDQGLDASMAIEPMAGGVLIGLTTMMCFLSLMTAVYWGQMSGCEDDTGDVEGYSCYHAWGMAAVAWFASFLLVAEFAVLAALILWKEDIFFVDGGYDNFDAQEDRGA----YNSSAY-AYDGVTFGAG 4100
+D +D KA + VLT C+ + + VV+S ANAGFN VLT L+YA Y +K ++ ++ G LIG + ++ LSL TA+YWGQ++ CE + + YSC + G AV FAS L + + A+ AL+ WK++ ++ GA + Y AYDG F AG
Sbjct: 1 MDVLASMDHTKATLFGIGAHGVLTACYLICSFVVASTANAGFNAVLTGLVYAVYCVGAYQVLHKSKTA------------LSVGFLIGFSALLIVLSLETAIYWGQLANCETVSESISQYSCSNKSGYRAVCAFASLLFILQGAMTTALVAWKDEFISDPNTASLYEDLNQPGAGLDATSDQPYTAYDGGNFSAG 183
BLAST of mRNA_P-fluviatile_contig8.14361.1 vs. uniprot
Match: A0A7R9U994_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U994_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 1.340e-14 Identity = 54/162 (33.33%), Postives = 80/162 (49.38%), Query Frame = 3
Query: 3621 ACVVSSNANAGFNVVLTALIYAAYA-GLLATFFNKKRSVDQGLDASMAIEPMAGGVLIGLTTMMCFLSLMTAVYWGQMSGCEDDTGDVEGYSCYHAWGMAAVAWFASFLLVAEFAVLAALILWKEDIFFVDGGYDNFDAQ----EDRGAYNSSAYAYDGVTF 4091
ACVV+ ANAGFN VLTAL + G + + ++ A G +IG+ TMM L MTA++WGQ+SGCE DV+ Y+C + A F+ L + + A L+LW++D Y++ + + GA +S AYD T+
Sbjct: 58 ACVVAPTANAGFNAVLTALCSCLFVVGAYRVLYRSQSTL-------------AVGFVIGVATMMSLLMFMTAIFWGQLSGCEKVDEDVDQYTCDNKKAYGATCAFSVLLFLLDTAFTILLVLWRDDFMGETAAYEDIGSSPFVNDQPGAEGNSYAAYDSSTY 206
BLAST of mRNA_P-fluviatile_contig8.14361.1 vs. uniprot
Match: D7FPE0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPE0_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 1.710e-13 Identity = 67/196 (34.18%), Postives = 98/196 (50.00%), Query Frame = 3
Query: 3588 MAVLTVCFFVFACVVSSNANAGFNVVLTALIYAAYAGLLATFFNKKRSVDQGLDASMAIEPMAGGVLIGLTTMMCFLSLMTAVYWGQMSGCEDD-TGDVEGYSCYHAWGMAAVAWFASFLLVAEFAVLAALI-----LWKEDIFFVDGGYDNFDAQEDR-GAYNSSAYAYDGVTFGAGGIGGGDGDMRGVPQEADL 4154
M V T FF+ A VV+S NAGF+VVLT L+ + + A + K+ D L G LIG+T ++ ++LMTA+YWGQ++GC+ D GD + YSC + M VA FAS + V + + L+ L +ED G Y ++D G +S + V G+ +G G G P+ DL
Sbjct: 37 MLVFTAAFFICALVVASIDNAGFDVVLTGLLLCVWE-VGAMWLLKRGPHDTSL-----------GFLIGVTLVLNVITLMTAIYWGQLAGCDSDYDGDYDQYSCSNKSAMRGVAAFASIIWVLQLPFIYLLVQRRGVLTREDYATSGGRYADYDDPAFAPGERDSGGWGKPPVDDGSPRVGAVVGSSSGTPETTDL 220
BLAST of mRNA_P-fluviatile_contig8.14361.1 vs. uniprot
Match: A0A7S2S6Q8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6Q8_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 4.460e-13 Identity = 48/151 (31.79%), Postives = 80/151 (52.98%), Query Frame = 3
Query: 3549 LDKRKALNVIVLCMAVLTVCFFVFACVVSSNANAGFNVVLTALIYAAYA--GLLATFFNKKRSVDQGLDASMAIEPMAGGVLIGLTTMMCFLSLMTAVYWGQMSGCEDDTGDVEGYSCYHAWGMAAVAWFASFLLVAEFAVLAALILWKED 3995
LD++ L +++ A+ T CFF+ ACV + AN GFNVV T+ + + G+L + + L + + G L+GL+ +LSL TA++WGQ++ C+ + YSC + AV FA+ L + + + A L +WK+D
Sbjct: 17 LDRKLVLKLLLGAHALFTGCFFICACVAAKTANMGFNVVFTSFCFGFHVAVGILV--------IHRSLHTQLWV-----GFLLGLSGATAWLSLQTAIFWGQLADCDRHAHHLSQYSCSNVSAYKAVCAFAALLFILQGGLFAVLAVWKDD 154 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14361.1 >prot_P-fluviatile_contig8.14361.1 ID=prot_P-fluviatile_contig8.14361.1|Name=mRNA_P-fluviatile_contig8.14361.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=215bp MIPAQLLDAHMQLDKRKALNVIVLCMAVLTVCFFVFACVVSSNANAGFNVback to top mRNA from alignment at P-fluviatile_contig8:727778..740315- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14361.1 ID=mRNA_P-fluviatile_contig8.14361.1|Name=mRNA_P-fluviatile_contig8.14361.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=12538bp|location=Sequence derived from alignment at P-fluviatile_contig8:727778..740315- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:727778..740315- >mRNA_P-fluviatile_contig8.14361.1 ID=mRNA_P-fluviatile_contig8.14361.1|Name=mRNA_P-fluviatile_contig8.14361.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1290bp|location=Sequence derived from alignment at P-fluviatile_contig8:727778..740315- (Porterinema fluviatile SAG_2381)back to top |