mRNA_P-fluviatile_contig8.14351.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14351.1 vs. uniprot
Match: D8LG55_ECTSI (Similar to Stromal cell-derived factor 2 (SDF-2) (Partial) (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG55_ECTSI) HSP 1 Score: 266 bits (679), Expect = 3.290e-80 Identity = 123/148 (83.11%), Postives = 134/148 (90.54%), Query Frame = 1
Query: 2002 SSAVALDVAPVLVTCGSVIKLRHDDTRFHLHSHVIKWGGGSGQQSVTAHGGEDDQGSLWIVKEGDGALPCEVGQPIACGSVVRMEHVNTGRNLHSHAFKSPLTRGQEVSAFGDSGEGDGGDSWELICSRKGSKNWARDESVKLKHVVT 2445
++A ++ VLVTCGSVIKLRHD TRFHLHSHVIKWGGGSGQQSVT HGGEDDQGS+WIVKEGDGALPCEVGQP+ACGSVVR+EHV+TGRNLHSH FKSPLTRGQEVSAFGDSGEGD GDSWE+ C KGS+ WARDESV+LKHV T
Sbjct: 17 AAACSVGAGEVLVTCGSVIKLRHDTTRFHLHSHVIKWGGGSGQQSVTGHGGEDDQGSMWIVKEGDGALPCEVGQPVACGSVVRLEHVSTGRNLHSHNFKSPLTRGQEVSAFGDSGEGDAGDSWEVTCVHKGSETWARDESVRLKHVST 164
BLAST of mRNA_P-fluviatile_contig8.14351.1 vs. uniprot
Match: A0A024UFT7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UFT7_9STRA) HSP 1 Score: 177 bits (449), Expect = 5.280e-46 Identity = 87/153 (56.86%), Postives = 105/153 (68.63%), Query Frame = 1
Query: 2038 VTCGSVIKLRHDDTRFHLHSHVIKWGGGSGQQSVTAHGGEDDQGSLWIVKEGDGALPCEVGQPIACGSVVRMEHVNTGRNLHSHAFKSPLTRGQ--EVSAFGDSGEGDGGDSWELICSRK-------------GSKNWARDESVKLKHVVTHK 2451
VTCGS IKL H+D+RF LHSH + +G GSGQQSVTAHG DD S W+VKEGDGA PC++G I CGS +R+EHVNT RNLHSH F SPL+ G+ EVS FG +G+GD GDSW + C G +W RDE V+L+HVV+ K
Sbjct: 103 VTCGSTIKLVHEDSRFRLHSHEVNYGTGSGQQSVTAHGSRDDFNSYWLVKEGDGASPCDLGAKIRCGSTIRLEHVNTRRNLHSHDFSSPLSNGRYAEVSGFGVAGDGDSGDSWIVECENAQQCQATDKDCHSTGVPSWGRDELVRLRHVVSGK 255
BLAST of mRNA_P-fluviatile_contig8.14351.1 vs. uniprot
Match: A0A6G0XVG4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVG4_9STRA) HSP 1 Score: 176 bits (447), Expect = 8.860e-46 Identity = 85/153 (55.56%), Postives = 106/153 (69.28%), Query Frame = 1
Query: 2038 VTCGSVIKLRHDDTRFHLHSHVIKWGGGSGQQSVTAHGGEDDQGSLWIVKEGDGALPCEVGQPIACGSVVRMEHVNTGRNLHSHAFKSPLTRGQ--EVSAFGDSGEGDGGDSWELICSRK-------------GSKNWARDESVKLKHVVTHK 2451
VTCGS IKL H+++RF LHSH + +G GSGQQSVTAHG +DD S W+VKEGD +PC +G I CG+ +R+EH+NT RNLHSH F SPL+RG+ EVS FG +G+GDGGD+W L C G +WARDE V+L+HV T K
Sbjct: 99 VTCGSTIKLVHEESRFRLHSHEVNYGTGSGQQSVTAHGSQDDFNSYWLVKEGDSEIPCVLGSKIKCGAKIRLEHINTRRNLHSHDFSSPLSRGRFAEVSGFGVAGDGDGGDTWVLECENAEQCQASDKDCQTTGVPSWARDELVRLRHVATGK 251
BLAST of mRNA_P-fluviatile_contig8.14351.1 vs. uniprot
Match: W4H6S5_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6S5_9STRA) HSP 1 Score: 176 bits (447), Expect = 9.880e-46 Identity = 86/153 (56.21%), Postives = 105/153 (68.63%), Query Frame = 1
Query: 2038 VTCGSVIKLRHDDTRFHLHSHVIKWGGGSGQQSVTAHGGEDDQGSLWIVKEGDGALPCEVGQPIACGSVVRMEHVNTGRNLHSHAFKSPLTRGQ--EVSAFGDSGEGDGGDSWELICSR-------------KGSKNWARDESVKLKHVVTHK 2451
VTCGS IKL HD++RF LHSH + +G GSGQQSVTAHG DD S W+VKEGDGA PC +G I CGS +R+EHVN+ RNLHSH F SPL+ G+ EVS FG +G+GDGGDSW + C G +W RDE V+L+H+V+ K
Sbjct: 104 VTCGSTIKLVHDESRFRLHSHEVNYGTGSGQQSVTAHGSRDDFNSYWLVKEGDGATPCALGAKIICGSTIRLEHVNSRRNLHSHDFASPLSSGRFAEVSGFGVAGDGDGGDSWTVECDNAQQCQASDKDCHTSGIPSWGRDELVRLRHLVSGK 256
BLAST of mRNA_P-fluviatile_contig8.14351.1 vs. uniprot
Match: A0A485LF58_9STRA (Aste57867_20541 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LF58_9STRA) HSP 1 Score: 174 bits (442), Expect = 4.470e-45 Identity = 86/153 (56.21%), Postives = 104/153 (67.97%), Query Frame = 1
Query: 2038 VTCGSVIKLRHDDTRFHLHSHVIKWGGGSGQQSVTAHGGEDDQGSLWIVKEGDGALPCEVGQPIACGSVVRMEHVNTGRNLHSHAFKSPLTRGQ--EVSAFGDSGEGDGGDSWELICSRK-------------GSKNWARDESVKLKHVVTHK 2451
VTCGS IKL H+++RF LHSH + +G GSGQQSVTA G DD S W+VKEGDGA PC +G I CGS+VR+EH+NT RNLHSH F SPL+ G+ EVS FG +G+GDGGDSW + C G +W RDE V+L+HV T K
Sbjct: 103 VTCGSTIKLVHEESRFRLHSHEVSYGTGSGQQSVTATGSRDDFNSYWLVKEGDGAAPCVLGAKITCGSIVRLEHINTRRNLHSHNFASPLSNGRFAEVSGFGVAGDGDGGDSWVVECDNAQQCQAHDKDCQTTGVPSWGRDELVRLRHVATGK 255
BLAST of mRNA_P-fluviatile_contig8.14351.1 vs. uniprot
Match: A0A812U349_SYMMI (Sdf2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U349_SYMMI) HSP 1 Score: 169 bits (429), Expect = 2.360e-44 Identity = 82/139 (58.99%), Postives = 103/139 (74.10%), Query Frame = 1
Query: 2035 LVTCGSVIKLRHDDTRFHLHSHVIKWGGGSGQQSVTAHGGEDDQGSLWIVKEGDGALPCEVGQPIACGSVVRMEHVNTGRNLHSHAFKSPLTRGQEVSAFGDSGEGDGGDSWELICSRKGSKNWARDESVKLKHVVTHK 2451
+V+CGS +KL + + HLHSH I +G GSGQQSVTAHG DDQGSLW++ EG+G+ CE G PI CGS +R+ H++TG+NLHSH FKSPL+ EVS FG++G GD GD+WE+ C RKG W R E V+LKHV T K
Sbjct: 26 VVSCGSAVKLLNVQSNHHLHSHGIAYGSGSGQQSVTAHGSVDDQGSLWLLTEGEGSPLCEAGTPIKCGSRIRLRHMSTGKNLHSHMFKSPLSGNFEVSGFGENGHGDTGDNWEVQC-RKGPY-WLRGEHVQLKHVDTGK 162
BLAST of mRNA_P-fluviatile_contig8.14351.1 vs. uniprot
Match: A0A4D9DC59_9STRA (Uncharacterized protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DC59_9STRA) HSP 1 Score: 169 bits (429), Expect = 2.820e-44 Identity = 78/144 (54.17%), Postives = 99/144 (68.75%), Query Frame = 1
Query: 2023 VAPVL------VTCGSVIKLRHDDTRFHLHSHVIKWGGGSGQQSVTAHGGEDDQGSLWIVKEGDGALPCEVGQPIACGSVVRMEHVNTGRNLHSHAFKSPLTRGQEVSAFGDSGEGDGGDSWELICSRKGSKNWARDESVKLKH 2436
V PVL +T GSV+KL+H +++ LHSH I WG GSGQQSVTAHG DD+G LW+V EGD E G P+ACG+ +R+ H+ T +NLHSH F SPL+ QEVS FGD G GD GD+WE++C G+K W R + V+ KH
Sbjct: 19 VTPVLSLEDDIMTFGSVVKLQHVPSKYFLHSHQISWGSGSGQQSVTAHGSADDRGGLWVVAEGDNDPFKEGGSPVACGTAIRLGHMETSKNLHSHFFSSPLSNQQEVSCFGDGGRGDSGDNWEVVCMAPGAKFWRRGDEVRFKH 162
BLAST of mRNA_P-fluviatile_contig8.14351.1 vs. uniprot
Match: A0A835YSR9_9STRA (MIR motif-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR9_9STRA) HSP 1 Score: 163 bits (412), Expect = 8.680e-43 Identity = 75/136 (55.15%), Postives = 95/136 (69.85%), Query Frame = 1
Query: 2032 VLVTCGSVIKLRHDDTRFHLHSHVIKWGGGSGQQSVTAHGGEDDQGSLWIVKEGDGALPCEVGQPIACGSVVRMEHVNTGRNLHSHAFKSPLTRGQEVSAFGDSGEGDGGDSWELICSRKGSKNWARDESVKLKHV 2439
V VTCGS +KL+H T + LHSH ++WG GSGQQSVTA+G DDQG L+IVKE LPCE G + CG +VR+EH+ T +NLH+H F SPL R QEVSAFG+ G+GD GD+W + C S +W +D V H+
Sbjct: 22 VEVTCGSTVKLQHVKTGYQLHSHQVRWGAGSGQQSVTANGAADDQGELFIVKEPHNGLPCEAGTVVKCGGIVRLEHMFTQKNLHTHRFVSPLLRLQEVSAFGEEGDGDSGDNWVVECVDPSSGSWLKDGKVSRLHL 157
BLAST of mRNA_P-fluviatile_contig8.14351.1 vs. uniprot
Match: A0A7S3H152_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H152_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.530e-42 Identity = 77/139 (55.40%), Postives = 100/139 (71.94%), Query Frame = 1
Query: 2038 VTCGSVIKLRHDDTRFHLHSHVIKWGGGSGQQSVTAHGGEDDQGSLWIVKEGDGALPCEVGQPIACGSVVRMEHVNTGRNLHSHAFKSPLTRGQEVSAFGD-SGEGDGGDSWELICSRKGSKNWARDESVKLKHVVTHK 2451
VTCGSVIKL H +T +LHSH I WG GSGQQSVT + ++D+GSLW+VKEG A PCEVG+P+ CG +R+EH++T +NLHSH F++PL+ QEVSAFGD +G GD GD+W++ C W R + V +H T K
Sbjct: 36 VTCGSVIKLIHKETGNNLHSHGIAWGSGSGQQSVTTNSVKNDKGSLWLVKEGFRAAPCEVGKPVQCGETIRLEHLDTRKNLHSHLFRAPLSGNQEVSAFGDENGNGDTGDNWQVHCDSSADAVWNRKKPVVFRHADTGK 174
BLAST of mRNA_P-fluviatile_contig8.14351.1 vs. uniprot
Match: A0A067CV48_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CV48_SAPPC) HSP 1 Score: 166 bits (420), Expect = 3.520e-42 Identity = 81/153 (52.94%), Postives = 102/153 (66.67%), Query Frame = 1
Query: 2038 VTCGSVIKLRHDDTRFHLHSHVIKWGGGSGQQSVTAHGGEDDQGSLWIVKEGDGALPCEVGQPIACGSVVRMEHVNTGRNLHSHAFKSPLTRGQ--EVSAFGDSGEGDGGDSWEL-------------ICSRKGSKNWARDESVKLKHVVTHK 2451
VTCGS IKL H+ +RF LHSH + +G GSGQQSVTAHG DD S W+VKEGDG C +G IACG+ +R+EH+NT RNLHSH F SPL+ G+ EVS FG +G+GD DSW L C+ + +WARD+ V+L+HV T +
Sbjct: 98 VTCGSTIKLVHEASRFRLHSHEVNYGTGSGQQSVTAHGSRDDYNSYWLVKEGDGDAACSLGAKIACGATIRLEHINTRRNLHSHHFASPLSNGRFGEVSGFGVAGDGDRSDSWILECESGMQCKAGDEACANGAAPSWARDDLVRLRHVETQR 250 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14351.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14351.1 >prot_P-fluviatile_contig8.14351.1 ID=prot_P-fluviatile_contig8.14351.1|Name=mRNA_P-fluviatile_contig8.14351.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=68bp MEHVNTGRNLHSHAFKSPLTRGQEVSAFGDSGEGDGGDSWELICSRKGSKback to top mRNA from alignment at P-fluviatile_contig8:680836..685816+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14351.1 ID=mRNA_P-fluviatile_contig8.14351.1|Name=mRNA_P-fluviatile_contig8.14351.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4981bp|location=Sequence derived from alignment at P-fluviatile_contig8:680836..685816+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:680836..685816+ >mRNA_P-fluviatile_contig8.14351.1 ID=mRNA_P-fluviatile_contig8.14351.1|Name=mRNA_P-fluviatile_contig8.14351.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=408bp|location=Sequence derived from alignment at P-fluviatile_contig8:680836..685816+ (Porterinema fluviatile SAG_2381)back to top |