mRNA_P-fluviatile_contig8.14343.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14343.1
Unique NamemRNA_P-fluviatile_contig8.14343.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig8.14343.1 vs. uniprot
Match: D7FTN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN5_ECTSI)

HSP 1 Score: 426 bits (1095), Expect = 1.190e-137
Identity = 268/456 (58.77%), Postives = 296/456 (64.91%), Query Frame = 1 
Query:  253 VLSPRMLPRLTRTWSGPLLWPNEVNHVPTAAMVRLTQGRAAELQYLARTSGSDNDKQEGSTASKTGETSSSSGGDASDARPSLHFDSKQFSLLRLESDKFNDGEGSRRSRANRPRAAAA---GETGAAVGGA--VSPGGLEGEQERDHGYGKRVGEQSDDTGAVAVPXXXXXXXXXXXXXXXXXXXXXVTTLPGWDGPLP-EHG-AVLIADGFLVPGKADGGVYLVVPNAGGENGFVPRTSTAGXXXXXXXXXVGGDDSRATXXXXXXXXXXXXXXXXXXXXTAPAERIVRLTAPKRGWFYHKAVWLVLPGGKKVVLTARVHKPLFGQAEGELVVLEMPRVDSPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDGTVQVICAEFFGGRVTMHSVSGGGPVPGSRPVVTESWVLDDDAGPAYSVTAADLRGGSPGGRPTHFLVTTHESSYNTYSFFA 1599
            VLS RM PRLT TW+GPLLWPNEVN   +A+  R  +G                    G + + +GET+ S+GG A   +P L F+S+QFSLLRLESDKF+DG+  R  R  R   AAA     TGA  GGA    P   E    +D   G+     S  T +   P                       TLPGWDGPLP E G AVLIADGFLVPGKADGGVYLVVP A  E     R +TA           GG+ SRA                       P +RIVRLT PKRGWFYHKAVW+VLPGGKKVVLTARVHKP+FGQAEGELV+LEMPRVDSPLSEQNLPWREKVLVTGPDVMFEVVDLD ED TVQVICAEFFGGRVTMHS+ GGG +PGS+P VTESWVLDD+AGPAYS+TAADLRGGSPGGRPTHFLVT HESSYNTYS FA
Sbjct:  174 VLSRRMQPRLTGTWAGPLLWPNEVNQDISAS--RAKEGG-------------------GDSLAGSGETNGSAGGGAHVQQP-LRFESQQFSLLRLESDKFSDGD--RPPRLRRETEAAALPLPVTGAGAGGAPQAPPNTAEPSLLQD---GRNAAGTSASTQSPPPPP----------------------TLPGWDGPLPPEDGDAVLIADGFLVPGKADGGVYLVVPAAAEE-----RRATAAAGLGVDGAARGGE-SRAEGKAGAGAAAAAGSIP-------PEDRIVRLTNPKRGWFYHKAVWVVLPGGKKVVLTARVHKPIFGQAEGELVLLEMPRVDSPLSEQNLPWREKVLVTGPDVMFEVVDLDREDSTVQVICAEFFGGRVTMHSLWGGGQLPGSQPSVTESWVLDDNAGPAYSITAADLRGGSPGGRPTHFLVTVHESSYNTYSLFA 567
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BLAST of mRNA_P-fluviatile_contig8.14343.1 vs. uniprot
Match: A0A6H5KJ55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ55_9PHAE)

HSP 1 Score: 416 bits (1068), Expect = 1.170e-128
Identity = 269/495 (54.34%), Postives = 304/495 (61.41%), Query Frame = 1 
Query:  253 VLSPRMLPRLTRTWSGPLLWPNEVNHVPTA-----AMVR-LTQGRA---------------AELQYLARTSGSD--------NDKQEGSTA----------SKTGETSSSSGGDASDARPSLHFDSKQFSLLRLESDKFNDGEGS-RRSRANRPRAAAAGETGAAVGGA--VSPGGLEGEQERDHGYGKRVGEQSDDTGAVAVPXXXXXXXXXXXXXXXXXXXXXVTTLPGWDGPL-PEHG-AVLIADGFLVPGKADGGVYLVVPNAGGENGFVPRTSTAGXXXXXXXXXVGGDDSRATXXXXXXXXXXXXXXXXXXXXTAPAE-RIVRLTAPKRGWFYHKAVWLVLPGGKKVVLTARVHKPLFGQAEGELVVLEMPRVDSPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDGTVQVICAEFFGGRVTMHSVSGGGPVPGSRPVVTESWVLDDDAGPAYSVTAADLRGGSPGGRPTHFLVTTHESSYNTYSFFAG 1602
            VLS R  PRLT TW+GPLLWPNEVN V  A     ++VR +T GRA               AEL+YLA  +GS           +Q+ ST+          + +GET+ ++GG  +  +  L F+S+QFSLLRLESDKF+DG+ S R+ R                GGA  V PG  E    +D   G+     S  T +                          TTLPGWDGPL PE G AVLIADGFLVPGKADGGVYLVVP A  E                     GG                          ++P E +IVRLT PKRGWFYHKAVW+VLPGGKKVVLTARVHKP+FGQAEGELV+LEMPRVD PLSEQNLPWREKVLVTGPDVMFEVVDLD ED TVQVICAEFFGGRVTMHS+ GGG +PGS+P VTESWVLDD+AGPAYS+TAADLRGGSPGGRPTHFLVT HESSYNTYS FAG
Sbjct:  460 VLSRRTQPRLTGTWAGPLLWPNEVNQVGAAGCLAWSLVRWVTAGRASGRGGPLSVEGRGREAELKYLATRNGSSXXXXXXXGRQRQDSSTSRANEGGSDGLAGSGETNGNAGG--AHVQQPLRFESQQFSLLRLESDKFSDGDCSPRKRRETXXXXXXXXXXXXXXGGAPQVPPGTAEPSLLQD---GRNAAGTSASTESPP------------------------TTLPGWDGPLLPEDGDAVLIADGFLVPGKADGGVYLVVPAAAEERXXXXXGVGVDGAARGRESRAGGKAGAGAAAAVG---------------SSPTEDKIVRLTNPKRGWFYHKAVWVVLPGGKKVVLTARVHKPIFGQAEGELVLLEMPRVDHPLSEQNLPWREKVLVTGPDVMFEVVDLDREDSTVQVICAEFFGGRVTMHSLWGGGQLPGSQPSVTESWVLDDNAGPAYSITAADLRGGSPGGRPTHFLVTVHESSYNTYSLFAG 910
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BLAST of mRNA_P-fluviatile_contig8.14343.1 vs. uniprot
Match: A0A836CJ47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ47_9STRA)

HSP 1 Score: 208 bits (530), Expect = 2.930e-57
Identity = 119/264 (45.08%), Postives = 145/264 (54.92%), Query Frame = 1 
Query:  820 WDGPLPEHGAVLIADGFLVPGKADGGVYLVVPNAG-GENGFVPRTSTAGXXXXXXXXXVGGDDSRATXXXXXXXXXXXXXXXXXXXXTAPAERIVRLTAPKRGWFYHKAVWLVLPGGKKVVLTARVHKPLFGQAEGELVVLEMPRVDSPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDGTVQVICAEFFGGRVTMHSVSGGGPVPGSRPVVTESWVLDDDAGPAYSVTAADLRGGSPGGRPTHFLVTTHESSYNTYSFFAGGN 1608
            W+G  P   A+L+ADGFL+PGK DGGVYLV+P    GE G    +                                                 VR++  K+GWFYHKAVW+ +P G++ VL AR  KPLFG   GELV+ +MP V  PL+   LPWRE VL  GPDVMF +VDLD  DGTV+V  AEFF  R+TMHSV  G    G++  V +SWVLD + GPAYSV AADL G   G  PTH LVT+HE  Y+     A G+
Sbjct:    9 WEG-APADAALLVADGFLMPGKTDGGVYLVLPRERRGEGGGAAESD-----------------------------------------------FVRVSGIKKGWFYHKAVWVNMPDGRRGVLAARATKPLFGGGRGELVLFDMPSVAQPLAAYALPWRETVLANGPDVMFHLVDLDDADGTVEVFAAEFFARRLTMHSVRWGDARRGTQSQVVQSWVLDSNCGPAYSVVAADLLGTGLG--PTHLLVTSHECLYDNRLLKAAGD 222
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BLAST of mRNA_P-fluviatile_contig8.14343.1 vs. uniprot
Match: A0A7S4DAE7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAE7_HETAK)

HSP 1 Score: 184 bits (467), Expect = 8.360e-47
Identity = 107/253 (42.29%), Postives = 137/253 (54.15%), Query Frame = 1 
Query:  847 AVLIADGFLVPGKADGGVYLVVPNAGGENGFVPRTSTAGXXXXXXXXXVGGDDSRATXXXXXXXXXXXXXXXXXXXXTAPAERIVRLTAPKRGWFYHKAVWLVL-PGGKKVVLTARVHKPLFGQAEGELVVLEMPRVDSPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDGTVQVICAEFFGGRVTMHSVSGGGPVPGSRPV-VTESWVLDDDAGPAYSVTAADLRGGSPGGRPTHFLVTTHESSYNTYSFFA 1599
            A+L+ADGFL+PGK DG VYLV    G                                                     P ER +RLTAP  G+FYHKAVW+ L   G+K +LTAR  KPL GQAEGELV  E P V  PL+    PW+E V+ TGPDVMFEV+D+DP+D +++++ AEFF  R+T+ S++      G   + V +  V+D   GPAY VTAA+LR G PG  PTH LVT+H   Y+  S F+
Sbjct:  173 ALLVADGFLMPGKNDGAVYLVASPGG-----------------------------------------------------PGERRLRLTAPAPGFFYHKAVWVDLFQTGQKGILTARAKKPLLGQAEGELVFFEQPLVRDPLASFCTPWKETVITTGPDVMFEVIDIDPDDDSIEIVAAEFFNERLTLTSLAPRRDWLGPNKIQVKQKMVIDAGCGPAYGVTAANLRTGRPGDPPTHLLVTSHACQYDPASDFS 372
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BLAST of mRNA_P-fluviatile_contig8.14343.1 vs. uniprot
Match: A0A4D9DCX2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCX2_9STRA)

HSP 1 Score: 176 bits (445), Expect = 6.000e-43
Identity = 104/246 (42.28%), Postives = 130/246 (52.85%), Query Frame = 1 
Query:  847 AVLIADGFLVPGKADGGVYLVVPNAGGENGFVPRTSTAGXXXXXXXXXVGGDDSRATXXXXXXXXXXXXXXXXXXXXTAPAERIVRLTAPKRGWFYHKAVWLVL--PGGKKVVLTARVHKPLFGQAEGELVVLEMPRVDSPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDGTVQVICAEFFGGRVTMHSVSGGGPVPGSRPVVTESWVLDDDAGPAYSVTAADLRGGSPGGRPTHFLVTTHESSY 1578
            A+L+ADGFL+PG++DGG+Y+V           P TS                                             ER+  LT  + GWFYHKA W+ L  PGG+  +LTAR  KP F Q EGELV+L  P    PL+E N PW+E VL  GPDVMF+V DLDP D  ++V  +EFF  R+++H +  G    G  P V  S VLDD  GPAYSV  ADLRG    GRP+H LV++HE  Y
Sbjct:  507 ALLVADGFLMPGRSDGGLYVVQQ---------PGTSL--------------------------------------------ERVTSLTRHRPGWFYHKATWVDLLGPGGRPCLLTARATKPFFAQTEGELVLLLQPEGPFPLAEWNTPWQEVVLAKGPDVMFDVADLDPTDDVLEVFASEFFSRRLSLHRIIKGDWRTGRLPRVLTSEVLDDALGPAYSVVLADLRGQ---GRPSHVLVSSHECQY 696
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BLAST of mRNA_P-fluviatile_contig8.14343.1 vs. uniprot
Match: L1JIM1_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JIM1_GUITC)

HSP 1 Score: 153 bits (387), Expect = 1.320e-35
Identity = 101/246 (41.06%), Postives = 123/246 (50.00%), Query Frame = 1 
Query:  838 EHGAVLIADGFLVPGKADGGVYLVVPNAGGENGFVPRTSTAGXXXXXXXXXVGGDDSRATXXXXXXXXXXXXXXXXXXXXTAPAERIVRLTAPKRGWFYHKAVWLVLPGGKKVVLTARVHKPL--FGQAEGELVVLEMPRVDSPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDGTVQVICAEFFGGRVTMHSVSGGGPVPGSRPVVTESWVLDDDAGPAYSVTAADLRGGSPGGRPTHFLVTTHE 1569
            +   +L+ADGFLVPGK DG V +V    G                                                     P E   RLT  K+ WFYH+AV L   G  + VLTAR  KP+  F +AEGELV LE P   +P +E NLPWRE +L  GPDVMFEVVDLDPED TV+V+ AEFF  R++  S+         + V TE  ++DD  G AYSV AADL G +     +H LVTTHE
Sbjct:  236 DEACILVADGFLVPGKNDGSVTIVKDPGG-----------------------------------------------------PNEVAYRLTESKKSWFYHRAVPLHF-GSARGVLTARARKPILPFQEAEGELVWLEQPDTVNPFAEWNLPWREVILAEGPDVMFEVVDLDPEDDTVEVVAAEFFRQRLSFFSLRWDETCKSPKVVQTE--LIDDKLGQAYSVVAADLEGPN-----SHLLVTTHE 420
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BLAST of mRNA_P-fluviatile_contig8.14343.1 vs. uniprot
Match: A0A7S4CRI4_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CRI4_9EUGL)

HSP 1 Score: 124 bits (310), Expect = 4.710e-27
Identity = 68/145 (46.90%), Postives = 91/145 (62.76%), Query Frame = 1 
Query: 1165 GKKVVLTARVHKPL--FGQAEGELVVLEMPRVDSPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDGTVQVICAEFFGGRVTMHSVSGGGPVPGSRPVVTESWVLDDDAGPAYSVTAADLRGGSPGGRPTHFLVTTHESSYNTYSF 1593
            G++ +LTAR +KPL  F +A GELV LE P   +P  E + PW+E VLVTGPDVMF+VVDLDP D TV+V  +EFF  R+T+H ++         P V ++ V+D+  GPAY V  ADL G       +H LVTTH+   + Y +
Sbjct:    1 GREGILTARANKPLVPFTKALGELVWLERPNTLAPFREWSAPWKEHVLVTGPDVMFDVVDLDPNDETVEVFASEFFAERLTLHRIAWSRA--SDAPFVVDTQVIDNGLGPAYGVVVADLTGPR-----SHVLVTTHKYGMDYYYY 138
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BLAST of mRNA_P-fluviatile_contig8.14343.1 vs. uniprot
Match: A0A7S1DNQ2_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DNQ2_HEMAN)

HSP 1 Score: 119 bits (299), Expect = 3.810e-25
Identity = 95/254 (37.40%), Postives = 115/254 (45.28%), Query Frame = 1 
Query:  820 WDGPLPEHGAVLIADGFLVPGKADGGVYLVVPNAGGENGFVPRTSTAGXXXXXXXXXVGGDDSRATXXXXXXXXXXXXXXXXXXXXTAPAERIVRLTAPKRGWFYHKAVWLVLPGGKKVVLTARVHKPL--FGQAEGELVVLEMPRVDSPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDGTVQVICAEFFGGRVTMHSVSGGGPVPGSRPVVTESWVLDDDAGPAYSVTAADLRGGSPGGRPTHFLVTTHESS 1575
            W+G L + G +L+ADGFLVPGK  GGV+ V           P T                                              E +V LT  +   FYHKAV   + G + V LTAR   PL  + +  GELV LE P    P +  + PWRE VL  GPDVMF+V DLD  D TVQV  AEFF  R+TM S+         RP V +  VLD   G AYSV    L G +     +H LVTTHE +
Sbjct:  161 WEG-LDKPG-MLVADGFLVPGKTKGGVHFVTE---------PGTDR--------------------------------------------EEVVTLTEGRSKHFYHKAVPCSIDGHEGV-LTARARLPLVPWMKGVGELVWLEKPDTLQPTAPWSTPWREIVLAEGPDVMFDVADLDEGDTTVQVFAAEFFARRLTMFSILW--DADAGRPRVVQREVLDSQLGQAYSVQVLSLDGPN-----SHLLVTTHEDT 351
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BLAST of mRNA_P-fluviatile_contig8.14343.1 vs. uniprot
Match: A0A7S1G010_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G010_9STRA)

HSP 1 Score: 119 bits (299), Expect = 9.210e-25
Identity = 100/308 (32.47%), Postives = 131/308 (42.53%), Query Frame = 1 
Query:  814 PGWDGPLPEHGAVLIADGFLVPGKADGGVYLVV-PNAGGENGFVPRTSTAGXXXXXXXXXVGGDDSRATXXXXXXXXXXXXXXXXXXXXTAPAERIVRLTAPKRGWFYHKAVWLVLPG-GKKVVLTARVHKPLFGQAE-------------GELVVLEMPR-----------------VDSPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDGTVQVICAEFFGGRVTMHSVSGGGPVPGSRPVVTESWVLDDDAGPAYSVTAADLR---------------------GGS---PGGRPTHFLVTTHE 1569
            PG D  L +  A+L+ADGFLVPG+ DGG+Y+V  P   G  G       +           GG  SR                          E   R       WFYHKAVW+ L G G+  +LTAR  +P    ++             G+LV LE PR                 +  P   +++PW+E++L  GPDVMF V DLDP D T+ +I A+FFG +VT HS+  G      RP V    V+DDD G +Y +   +L                      GG    PG   TH LVT+HE
Sbjct:  129 PGLDVALED--ALLVADGFLVPGRDDGGIYVVRHPGGAGPLGRERAVRLS-------PGWDGGKGSRRMRSTVQSLARRLGGIDP-----VAEEDDAR-------WFYHKAVWIDLTGDGRWSILTARARRPDISFSDDGIPQEDPAVLPSGQLVWLERPRPHHRDKLTGELRDEDGTLFDPFGPRHVPWKERILDEGPDVMFAVADLDPTDDTIDIIAAQFFGKKVTCHSLRRG-----PRPEVISRHVIDDDCGASYGILLVNLSEKDDKDKTHVPSAPLVVAPGTGGDILRPGDTFTHVLVTSHE 410
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BLAST of mRNA_P-fluviatile_contig8.14343.1 vs. uniprot
Match: A0A7S0PKA3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PKA3_9STRA)

HSP 1 Score: 105 bits (263), Expect = 5.510e-22
Identity = 69/196 (35.20%), Postives = 96/196 (48.98%), Query Frame = 1 
Query: 1123 GWFYHKAVWLVLPG-GKKVVLTARVHKPLFGQA----EGELVVLEMPR-----------------VDSPLSEQNLPWREKVLVTGPDVMFEVVDLDPEDGTVQVICAEFFGGRVTMHSVSGGGPVPGSRPVVTESWVLDDDAGPAYSVTAADLRGG----------------------SPGGRPTHFLVTTHESSY 1578
            GW+YH+AVW+ L   G++ VL AR   P+ G+      GELV +E PR                 V  P   ++LPW+  +L  GPDVMF V DLD +D +V++I ++FFG +VT+HSV  G       P V    V+DD  G ++S   +DLR                        S G   +H LVT+HE S+
Sbjct:   23 GWYYHRAVWIDLTNDGRQSVLAARARSPIPGRPLEENVGELVFIERPRPYRYDEETGTPLDVDGTVFDPFGPRHLPWKTTILDEGPDVMFCVADLDEKDNSVEIIASQFFGKKVTLHSVERG-----LNPRVNFRRVIDDRCGSSFSAILSDLRPNCLSIEGEIDPKVIDNGSTIQTLSAGDTFSHLLVTSHECSF 213
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTN5_ECTSI1.190e-13758.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJ55_9PHAE1.170e-12854.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJ47_9STRA2.930e-5745.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4DAE7_HETAK8.360e-4742.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9DCX2_9STRA6.000e-4342.28Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
L1JIM1_GUITC1.320e-3541.06Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A7S4CRI4_9EUGL4.710e-2746.90Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A7S1DNQ2_HEMAN3.810e-2537.40Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7S1G010_9STRA9.210e-2532.47Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S0PKA3_9STRA5.510e-2235.20Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:600227..604746 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score156.0
Seed ortholog evalue5.4e-35
Seed eggNOG ortholog55529.EKX48363
KEGG koko:K16465,ko:K16466
KEGG TC1.I.1
EggNOG free text desc.Ca2 -binding protein (EF-Hand superfamily
EggNOG OGsCOG5126@1,KOG0028@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-11_001610.1
COG Functional cat.DTZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03019,ko03036
Hectar predicted targeting categoryother localisation
Exons7
Model size1761
Cds size1761
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817223.8792875-CDS-P-fluviatile_contig8:600226..6004701622817223.8792875-CDS-P-fluviatile_contig8:600226..600470Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 600227..600470 -
1693571570.6733463-CDS-P-fluviatile_contig8:600226..6004701693571570.6733463-CDS-P-fluviatile_contig8:600226..600470Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 600227..600470 -
1622817223.8897903-CDS-P-fluviatile_contig8:600807..6009951622817223.8897903-CDS-P-fluviatile_contig8:600807..600995Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 600808..600995 -
1693571571.9186015-CDS-P-fluviatile_contig8:600807..6009951693571571.9186015-CDS-P-fluviatile_contig8:600807..600995Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 600808..600995 -
1622817223.9020395-CDS-P-fluviatile_contig8:601417..6014951622817223.9020395-CDS-P-fluviatile_contig8:601417..601495Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 601418..601495 -
1693571571.9402711-CDS-P-fluviatile_contig8:601417..6014951693571571.9402711-CDS-P-fluviatile_contig8:601417..601495Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 601418..601495 -
1622817223.9126158-CDS-P-fluviatile_contig8:602486..6026161622817223.9126158-CDS-P-fluviatile_contig8:602486..602616Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 602487..602616 -
1693571571.9517-CDS-P-fluviatile_contig8:602486..6026161693571571.9517-CDS-P-fluviatile_contig8:602486..602616Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 602487..602616 -
1622817223.9232318-CDS-P-fluviatile_contig8:603142..6039331622817223.9232318-CDS-P-fluviatile_contig8:603142..603933Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 603143..603933 -
1693571571.961763-CDS-P-fluviatile_contig8:603142..6039331693571571.961763-CDS-P-fluviatile_contig8:603142..603933Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 603143..603933 -
1622817223.9355226-CDS-P-fluviatile_contig8:604376..6046521622817223.9355226-CDS-P-fluviatile_contig8:604376..604652Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 604377..604652 -
1693571571.978018-CDS-P-fluviatile_contig8:604376..6046521693571571.978018-CDS-P-fluviatile_contig8:604376..604652Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 604377..604652 -
1622817223.9459178-CDS-P-fluviatile_contig8:604692..6047461622817223.9459178-CDS-P-fluviatile_contig8:604692..604746Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 604693..604746 -
1693571571.9915771-CDS-P-fluviatile_contig8:604692..6047461693571571.9915771-CDS-P-fluviatile_contig8:604692..604746Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 604693..604746 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14343.1prot_P-fluviatile_contig8.14343.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 600227..604746 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14343.1

>prot_P-fluviatile_contig8.14343.1 ID=prot_P-fluviatile_contig8.14343.1|Name=mRNA_P-fluviatile_contig8.14343.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=587bp
RGSRRPVGRPSRVPVRLHPRLPFPPPFPSPLLSPKEEAAKDSRGTGPGAA
TGNPGRVAAVAAAVASSAVAVAAVGGRGGGGGGGVLSPRMLPRLTRTWSG
PLLWPNEVNHVPTAAMVRLTQGRAAELQYLARTSGSDNDKQEGSTASKTG
ETSSSSGGDASDARPSLHFDSKQFSLLRLESDKFNDGEGSRRSRANRPRA
AAAGETGAAVGGAVSPGGLEGEQERDHGYGKRVGEQSDDTGAVAVPPPPP
LLSSSAAAASVAAAAAAVTTLPGWDGPLPEHGAVLIADGFLVPGKADGGV
YLVVPNAGGENGFVPRTSTAGAGAGDGGGRVGGDDSRATETDAESVAATA
VGAAAAAASTAPAERIVRLTAPKRGWFYHKAVWLVLPGGKKVVLTARVHK
PLFGQAEGELVVLEMPRVDSPLSEQNLPWREKVLVTGPDVMFEVVDLDPE
DGTVQVICAEFFGGRVTMHSVSGGGPVPGSRPVVTESWVLDDDAGPAYSV
TAADLRGGSPGGRPTHFLVTTHESSYNTYSFFAGGNGGGSGGSSTRLPFE
VEVGASPPTTAAAAAAARSGPAGANPSDLRSIGAVEG
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mRNA from alignment at P-fluviatile_contig8:600227..604746-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14343.1 ID=mRNA_P-fluviatile_contig8.14343.1|Name=mRNA_P-fluviatile_contig8.14343.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4520bp|location=Sequence derived from alignment at P-fluviatile_contig8:600227..604746- (Porterinema fluviatile SAG_2381)
AGAGGGTCGAGACGGCCGGTCGGACGCCCTTCTCGTGTCCCAGTTCGGCT
TCACTCGCGGCGGGGCCGTGTCGTGCGTGGATCTCGACCCGGCCCCGCGA
TTACCGTTTCCGCCACCGTTTCCGTCGCCGCTCCTCTCCCCGAAGGAGGA
GGCGGCGAAAGACAGCAGGGGAACGGGGCCGGGTGCGGCAACCGGGAACC
CGGGGAGGGTTGCTGCTGTGGCTGCTGCGGTGGCGTCGTCGGCCGTAGCG
GTGGCGGCCGTGGGTGGGAGAGGTGGCGGCGGTGGCGGTGGCGTATTGTC
GCCTCGCATGCTGCCGAGACTCACGAGGACTTGGTCTGGCCCCCTGCTGT
GGCCCAACGAGGTCAACCATGTGAGAGAGAAGAGAAGTAGGCGACCTGGT
TACAGGTTGAGCGCGACCAATCTCTCAACTACATGACAGCAGCGGAAGTG
GGCGGGGTAGGGAGAGCGAGATTGGGACAGAGAAACAGTCAGAGGGAGAG
GTGTGAAGGGAGACAGTACATGCAGAAGCGAACGTGCGCGGGGCGCCGGA
GCACTCTCGGTTTGTTGCTGTTGTTGCCGTCGTCGTCGTCGTCGTCTTCG
TCTTTTTTGTTGCGGTGTCGTTGTGATTGTTGGTGTAGCTGCTGTTATTG
CTGACTTTTGCTGGTGCTGAAGACCTTGTTTCGTGCGGTATCCGCGACCT
CCTTTACGGTGATCAAGGTTGCCATGTCTCCTGCTTGTCGATCTCTCGCT
CGGTTTTCACGTCACGGAACGGCATTTTTGCGTCTGCTGCTGCCGCACAC
GGATTGCCGTCAGGTGCCGACGGCGGCAATGGTCCGCCTCACTCAAGGCA
GAGCAGCCGAGCTCCAGTATCTGGCTAGAACCAGCGGTAGCGACAACGAT
AAACAAGAGGGGAGCACAGCCTCGAAAACGGGGGAAACTAGCAGCAGTAG
CGGCGGCGACGCGTCTGACGCGAGGCCCTCCCTGCACTTCGATAGCAAAC
AATTCAGCCTCCTCCGGCTCGAGAGCGACAAATTCAATGACGGGGAGGGC
TCCCGCCGATCACGGGCCAACAGGCCGCGCGCGGCGGCGGCGGGGGAAAC
AGGGGCCGCGGTGGGAGGGGCAGTAAGCCCCGGCGGCTTGGAAGGGGAGC
AGGAGCGAGATCACGGTTATGGGAAACGGGTAGGCGAGCAGTCAGATGAC
ACAGGCGCGGTCGCGGTCCCGCCGCCGCCGCCGTTATTGTCATCGTCCGC
GGCGGCGGCGTCAGTGGCGGCAGCAGCGGCGGCGGTGACGACACTGCCCG
GTTGGGACGGCCCCCTGCCGGAGCACGGGGCGGTTCTCATCGCCGACGGG
TTCCTGGTACCCGGCAAGGCGGACGGCGGGGTCTACCTTGTCGTTCCCAA
TGCGGGTGGGGAGAATGGATTCGTTCCTAGGACCAGCACCGCCGGCGCCG
GCGCCGGCGACGGTGGTGGTAGGGTCGGTGGTGATGATTCGCGGGCGACA
GAGACGGACGCGGAATCTGTCGCCGCCACCGCCGTCGGCGCTGCTGCTGC
TGCGGCGAGCACAGCGCCGGCGGAGCGTATCGTGCGGCTGACGGCTCCGA
AAAGGTGGGACTTCGCGCTACGGGCGGTTGGACAGAAGCAGGGGAGCGAC
TTCGTTCCTAGCCTTCAAGGGTTGGCGAAAGGAGGGTTGTTGAAAGTGTG
CCTCATGACATCCTCTTTCTTGGCCTTTTGCGGTAGTCCCATGACAAGAC
ACGAAGGCCGGCAACACACTAGTGCCGCGACCTTTCCTCCCCCATGCCTC
TTCGTTCCCCTGCCCCCCTTGAATTCATGGGTGTTGCGGCGGCCCACGCA
GCAACACTGCCTCTGTTGAATCTTCCCCGGGGTGGCCCCGACGCCGTTTT
GTACTGAAGGCGAACACTGGCGTCAATCGCAACTGGGACAGAAACAATCT
ACAACAGCAACAGCGACAATACGGAAAATGCCTTCAACTATCATGACAGC
ATCCATCCTTGCGCTTTCGCTCAACGGTCCGCGTGTGCCATCTGGCGGTT
GTGGCTGACTGTGACCTCTCCTTCCGGCCTCGTTCTATGCGCGTGCGCGA
CGGCGGTGGCGCTCTGCGCGGGGAGCGCAGGGGTTGGTTCTACCACAAGG
CCGTGTGGCTTGTTCTCCCGGGGGGGAAGAAGGTGGTGCTCACCGCGAGG
GTGCACAAACCGCTCTTCGGCCAGGCGGAGGGCGAGCTGGTGGTCCTGGA
GATGCCGAGGGTGAGAGGATAGTCACTTGGGCTTCGAGGAACAGGGGGAA
ACAACACACGGAAGTATTTGTTGTCAACAGAGGATCACTTGCGTTCCTCG
GAAGAGGAGGGGGCATTGCACCGATTTTTTTTGGCCAAAAATCGTGGGGT
CCAGTGTCCTGGTTATCGCGGACAGTTCCTGGGGGTAGGGAGGGGGTTTC
CTAAGGGGCAAGGGGGGTTTACAATCGTCTTCGACTAACGCCGGCCAGCG
GCTAGGTTTTCTTTTCCGTCGTCATTAATGGTGAGCCTCCCCGACGCCGA
ATAATCGGAGGGAACAAGCAACGGCGGCGGACGAGAGACAGAATCGACGA
ATTGTGGTCAGCCAGAACTCTCCCTTTTTCCTCCGGATCCTTCGCTTGGT
CTTTTTAGACCACGAGCCTTGCGAAGAGGAAGCACAAGCGTTCTTTTTCT
TTTTTCTCGTTCACGTCTTAAGAAACAAATCTTCGGCGAGCGATCGGATG
TCTCTGACCGAGCGTCGGGTGTAGCGGACATTACAGCGACGTGCCGGTCG
TCGGCGGCCCGTGGGGCAGGGTAGTGCTCTTCGCAAGCGTTTCTCGAAGA
GCCCTCGCAGGCCCTTTTCAACGTGCTGGTTTGTCGTATGCCAATGGGGC
GCGTCGCAAGGCGTTGGCATAGATCGCGGGAGATGGGTCGGCGTTAGGCA
TCTGTGCCTGAGCTTCTGCTGCGTTTATGACGTTTTTCTTCGTTCTGATG
CCCGCTCGGCGTGGATACTATGCCAAGTCGAGTCGAGGTTGTGGTCGAAA
TCAACGGGCCCATGTGTATGCGTCAGTCCTCTTCACATGCAAGCTTTGAA
GAGGCTGTTTTAGCTGCGTAGTTCATATCCTCAGATGCGATTTCTCCTTC
ATTTTCTCGCTTGTGGTCTGCTAGTGCCAATCAACCCCGCCCCCCCTCCC
CTCCCACCCCACCGCATGTCCGGCCTGCCCGTCCTACCGACCTCAAACCA
GGTGGACAGCCCGCTTTCGGAACAGAATCTTCCTTGGAGAGAGAAGGTCT
TGGTGACGGGGCCCGATGTTATGTTCGAGGCAAGTCGATCCGGTCTGCCC
TTATCTAGGCAAAACTTAATCTGTCGGCGAGCGTCATAGTCTTGATCGTG
ATATTTCGATCGTGATTTACGATCGTGATCTTGATCTTTGCGGTTGTTGC
GGTCACCTTCCAACCAATCAACGGCATGAAGCTGCAAGGCCATTATAGGC
AAAATGGAAAATTCAGACTATCGGCGGTACGGGCCAACCGACGACAGGCA
CCACAGGCGCAAGAAATTTTTTGCGTTTTTGCAAAGCAGCTGTGAAGGTT
TGCATAAATTTTCTTTTCAAATCTAGCAGAAGCAAGTCGTGGCACGGCAT
GAAGTTTTCTTGCTACCATTAGAAAAAATAGAAATCAATGCTCCAGCATA
CATATTGTCCTTCGATGTATTGTACCTGCGTTATGACTGTTACCGACGTA
GGTGGTGGACCTGGACCCGGAAGACGGAACAGTGCAGGTGATCTGCGCGG
AGTTCTTCGGCGGGAGGGTCACTATGCACAGCGTCTCGGGGGGCGGGCCG
GTCCCCGGTAGTCGGCCTGTGGTGACGGAGTCCTGGGTGCTTGACGACGA
CGCAGGCCCGGCGTACTCGGTCACTGCCGCGGACCTGCGGTGAGCTCGTC
TCCGCCTTTTTATTCTGCTTGGTTACCCTTCACTTGTGTGAAATGGTCGC
GGGGCTGGCAACGAATGCAGGAGAGCCTAGATGAGGGAGGAGGAGGAAGA
GGAGGACGAAGCCAAAGCCCTGAACTCAAGTGCAAGAACGATGCAGTATA
AATGGAAAAAAAAGAATGCATCACGGAGCGAATGTGCACATGTCGTCGGG
GGAGCGCTGCCCCGACCCGCTCAGGGCGCGCGCGACGCTAGGCGAAAGTA
GTCCTCTTGACTCCCCTCCGCTTGCTCTCTCATCCCTTGCCGATGCGCGA
AACGTTGACGAAACTCAACGAAACAGCGGCGGCTCGCCCGGAGGCCGCCC
TACGCACTTTCTGGTGACCACGCACGAGTCCTCCTACAACACCTACTCCT
TCTTCGCGGGCGGAAACGGCGGCGGCAGCGGTGGCAGCAGCACAAGACTA
CCGTTCGAGGTCGAGGTCGGAGCCTCGCCGCCTACCACAGCGGCGGCGGC
GGCGGCGGCTCGATCTGGGCCCGCCGGAGCCAACCCTTCGGATCTACGAA
GCATTGGCGCGGTCGAGGGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:600227..604746-

>mRNA_P-fluviatile_contig8.14343.1 ID=mRNA_P-fluviatile_contig8.14343.1|Name=mRNA_P-fluviatile_contig8.14343.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3522bp|location=Sequence derived from alignment at P-fluviatile_contig8:600227..604746- (Porterinema fluviatile SAG_2381)
AGAGGGTCGAGACGGCCGGTCGGACGCCCTTCTCGTGTCCCAGTTCGGCT
TCACAGAGGGTCGAGACGGCCGGTCGGACGCCCTTCTCGTGTCCCAGTTC
GGCTTCACCCGCGATTACCGTTTCCGCCACCGTTTCCGTCGCCGCTCCTC
TCCCCGAAGGAGGAGGCGGCGAAAGACAGCAGGGGAACGGGGCCGGGTGC
GGCAACCGGGAACCCGGGGAGGGTTGCTGCTGTGGCTGCTGCGGTGGCGT
CGTCGGCCGTAGCGGTGGCGGCCGTGGGTGGGAGAGGTGGCGGCGGTGGC
GGTGGCGTATTGTCGCCTCGCATGCTGCCGAGACTCACGAGGACTTGGTC
TGGCCCCCTGCTGTGGCCCAACGAGGTCAACCATCCGCGATTACCGTTTC
CGCCACCGTTTCCGTCGCCGCTCCTCTCCCCGAAGGAGGAGGCGGCGAAA
GACAGCAGGGGAACGGGGCCGGGTGCGGCAACCGGGAACCCGGGGAGGGT
TGCTGCTGTGGCTGCTGCGGTGGCGTCGTCGGCCGTAGCGGTGGCGGCCG
TGGGTGGGAGAGGTGGCGGCGGTGGCGGTGGCGTATTGTCGCCTCGCATG
CTGCCGAGACTCACGAGGACTTGGTCTGGCCCCCTGCTGTGGCCCAACGA
GGTCAACCATGTGCCGACGGCGGCAATGGTCCGCCTCACTCAAGGCAGAG
CAGCCGAGCTCCAGTATCTGGCTAGAACCAGCGGTAGCGACAACGATAAA
CAAGAGGGGAGCACAGCCTCGAAAACGGGGGAAACTAGCAGCAGTAGCGG
CGGCGACGCGTCTGACGCGAGGCCCTCCCTGCACTTCGATAGCAAACAAT
TCAGCCTCCTCCGGCTCGAGAGCGACAAATTCAATGACGGGGAGGGCTCC
CGCCGATCACGGGCCAACAGGCCGCGCGCGGCGGCGGCGGGGGAAACAGG
GGCCGCGGTGGGAGGGGCAGTAAGCCCCGGCGGCTTGGAAGGGGAGCAGG
AGCGAGATCACGGTTATGGGAAACGGGTAGGCGAGCAGTCAGATGACACA
GGCGCGGTCGCGGTCCCGCCGCCGCCGCCGTTATTGTCATCGTCCGCGGC
GGCGGCGTCAGTGGCGGCAGCAGCGGCGGCGGTGACGACACTGCCCGGTT
GGGACGGCCCCCTGCCGGAGCACGGGGCGGTTCTCATCGCCGACGGGTTC
CTGGTACCCGGCAAGGCGGACGGCGGGGTCTACCTTGTCGTTCCCAATGC
GGGTGGGGAGAATGGATTCGTTCCTAGGACCAGCACCGCCGGCGCCGGCG
CCGGCGACGGTGGTGGTAGGGTCGGTGGTGATGATTCGCGGGCGACAGAG
ACGGACGCGGAATCTGTCGCCGCCACCGCCGTCGGCGCTGCTGCTGCTGC
GGCGAGCACAGCGCCGGCGGAGCGTATCGTGCGGCTGACGGCTCCGAAAA
GGTGCCGACGGCGGCAATGGTCCGCCTCACTCAAGGCAGAGCAGCCGAGC
TCCAGTATCTGGCTAGAACCAGCGGTAGCGACAACGATAAACAAGAGGGG
AGCACAGCCTCGAAAACGGGGGAAACTAGCAGCAGTAGCGGCGGCGACGC
GTCTGACGCGAGGCCCTCCCTGCACTTCGATAGCAAACAATTCAGCCTCC
TCCGGCTCGAGAGCGACAAATTCAATGACGGGGAGGGCTCCCGCCGATCA
CGGGCCAACAGGCCGCGCGCGGCGGCGGCGGGGGAAACAGGGGCCGCGGT
GGGAGGGGCAGTAAGCCCCGGCGGCTTGGAAGGGGAGCAGGAGCGAGATC
ACGGTTATGGGAAACGGGTAGGCGAGCAGTCAGATGACACAGGCGCGGTC
GCGGTCCCGCCGCCGCCGCCGTTATTGTCATCGTCCGCGGCGGCGGCGTC
AGTGGCGGCAGCAGCGGCGGCGGTGACGACACTGCCCGGTTGGGACGGCC
CCCTGCCGGAGCACGGGGCGGTTCTCATCGCCGACGGGTTCCTGGTACCC
GGCAAGGCGGACGGCGGGGTCTACCTTGTCGTTCCCAATGCGGGTGGGGA
GAATGGATTCGTTCCTAGGACCAGCACCGCCGGCGCCGGCGCCGGCGACG
GTGGTGGTAGGGTCGGTGGTGATGATTCGCGGGCGACAGAGACGGACGCG
GAATCTGTCGCCGCCACCGCCGTCGGCGCTGCTGCTGCTGCGGCGAGCAC
AGCGCCGGCGGAGCGTATCGTGCGGCTGACGGCTCCGAAAAGGGGTTGGT
TCTACCACAAGGCCGTGTGGCTTGTTCTCCCGGGGGGGAAGAAGGTGGTG
CTCACCGCGAGGGTGCACAAACCGCTCTTCGGCCAGGCGGAGGGCGAGCT
GGTGGTCCTGGAGATGCCGAGGGGGTTGGTTCTACCACAAGGCCGTGTGG
CTTGTTCTCCCGGGGGGGAAGAAGGTGGTGCTCACCGCGAGGGTGCACAA
ACCGCTCTTCGGCCAGGCGGAGGGCGAGCTGGTGGTCCTGGAGATGCCGA
GGGTGGACAGCCCGCTTTCGGAACAGAATCTTCCTTGGAGAGAGAAGGTC
TTGGTGACGGGGCCCGATGTTATGTTCGAGGTGGACAGCCCGCTTTCGGA
ACAGAATCTTCCTTGGAGAGAGAAGGTCTTGGTGACGGGGCCCGATGTTA
TGTTCGAGGTGGTGGACCTGGACCCGGAAGACGGAACAGTGCAGGTGATC
TGCGCGGAGTTCTTCGGCGGGAGGGTCACTATGCACAGCGTCTCGGGGGG
CGGGCCGGTCCCCGGTAGTCGGCCTGTGGTGACGGAGTCCTGGGTGCTTG
ACGACGACGCAGGCCCGGCGTACTCGGTCACTGCCGCGGACCTGCGGTGG
TGGACCTGGACCCGGAAGACGGAACAGTGCAGGTGATCTGCGCGGAGTTC
TTCGGCGGGAGGGTCACTATGCACAGCGTCTCGGGGGGCGGGCCGGTCCC
CGGTAGTCGGCCTGTGGTGACGGAGTCCTGGGTGCTTGACGACGACGCAG
GCCCGGCGTACTCGGTCACTGCCGCGGACCTGCGCGGCGGCTCGCCCGGA
GGCCGCCCTACGCACTTTCTGGTGACCACGCACGAGTCCTCCTACAACAC
CTACTCCTTCTTCGCGGGCGGAAACGGCGGCGGCAGCGGTGGCAGCAGCA
CAAGACTACCGTTCGAGGTCGAGGTCGGAGCCTCGCCGCCTACCACAGCG
GCGGCGGCGGCGGCGGCTCGATCTGGGCCCGCCGGAGCCAACCCTTCGGA
TCTACGAAGCATTGGCGCGGTCGAGGGCCGGCGGCTCGCCCGGAGGCCGC
CCTACGCACTTTCTGGTGACCACGCACGAGTCCTCCTACAACACCTACTC
CTTCTTCGCGGGCGGAAACGGCGGCGGCAGCGGTGGCAGCAGCACAAGAC
TACCGTTCGAGGTCGAGGTCGGAGCCTCGCCGCCTACCACAGCGGCGGCG
GCGGCGGCGGCTCGATCTGGGCCCGCCGGAGCCAACCCTTCGGATCTACG
AAGCATTGGCGCGGTCGAGGGC
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