mRNA_P-fluviatile_contig8.14336.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14336.1 vs. uniprot
Match: A0A6H5JN10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN10_9PHAE) HSP 1 Score: 173 bits (439), Expect = 2.830e-44 Identity = 120/192 (62.50%), Postives = 136/192 (70.83%), Query Frame = 2
Query: 947 EAGAGLGVIGIGEIEEEERRLQEMASKLELEISAVQRRRLEVHLVKVEQQLQEEAATRLVQREARVNLEVERSVRALAEEREERISSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEKELRERAVIDQRKAVEREDRGVRRRIRALMLEHGGKAAAAVSAPXXXXAA-----GDASSCGGPASRG 1507
EAGAG+GV+G+GEIEEEERRLQE ASKLELE+SAVQ RRLEV+LVKVEQQLQEEAA RLVQREAR+NLEVERS +ALA ER+ER+S VA +AE EL++RA+ DQRKAVEREDRGVRRR+RA+MLEHGGKA XXXX GDA+SCG P SRG
Sbjct: 95 EAGAGVGVVGMGEIEEEERRLQEKASKLELEMSAVQSRRLEVYLVKVEQQLQEEAAMRLVQREARINLEVERSCKALAAERDERVSGVAAVKDNLRGKLEQLSIMYEEVSTRMDNLEKAYAQAESELKDRALADQRKAVEREDRGVRRRVRAIMLEHGGKAXXXXXXXXXXXXXXXXXXGDAASCGEP-SRG 285
BLAST of mRNA_P-fluviatile_contig8.14336.1 vs. uniprot
Match: D7G239_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G239_ECTSI) HSP 1 Score: 161 bits (407), Expect = 3.990e-39 Identity = 163/309 (52.75%), Postives = 189/309 (61.17%), Query Frame = 2
Query: 674 ESVGDDVVGG---CMPDSSSRFDHEAAPASGSNITSKLIRSARELGQQ--------------PSSA--------------APATNHRKRAGVAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGAGLGVIGIGEIEEEERRLQEMASKLELEISAVQRRRLEVHLVKVEQQLQEEAATRLVQREARVNLEVERSVRALAEEREERISSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEKELRERAVIDQRKAVEREDRGVRRRIRALMLEHGGKAAAAVSAPXXXXAAGDASSCGGPASRG 1507
ES ++VVG + RF+HEAAPASGS+ITSKL+RSAR +G+Q P+ A APA++HR+ G A + XXXXXXXXXXXXXXXXXXXXXX ERRLQE ASKLELE+SAVQ RRLEV+LVKVEQQLQEEAA RLVQREAR+NLEVERS +ALA ER+ER+S VA +AE EL++RA+ DQRKA EREDRGVRRR+RA+MLEHGGKA XXXX GDA+SCG P SRG
Sbjct: 126 ESAMEEVVGAGGRAVNSKGQRFEHEAAPASGSSITSKLLRSARGVGRQQXXXXXXXXXXXSPPAPAVGIGSLVSSTAVVSAPASHHRR--GSASNSEVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------ERRLQEKASKLELEMSAVQSRRLEVYLVKVEQQLQEEAAMRLVQREARINLEVERSCKALAAERDERVSGVAAVKDNLRGKLEQLSTMYEEVSTRMNNLEKAYAQAENELKDRALADQRKAAEREDRGVRRRVRAIMLEHGGKAXXXXXXXXXXXN-GDAASCGEP-SRG 422
BLAST of mRNA_P-fluviatile_contig8.14336.1 vs. uniprot
Match: A0A6H5JPN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN8_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 9.100e-8 Identity = 58/111 (52.25%), Postives = 66/111 (59.46%), Query Frame = 1
Query: 379 ASSSQERPSTMGATIRRSKKRFSVEDTTGRTKARSGSVGSVGDKRSSLGSTSRPGGAAXXXXXGMGDKEDEDLGAISDLDAAAPSQEEIRLMIERIRR--------GVGGR 687
ASSSQERPS T R ++KR SVE G K RS S+GSVG +R+ LG G XXXXX + L I DLDA APSQEEIR+MI+RIRR G GGR
Sbjct: 33 ASSSQERPSVGAGTRRSARKRLSVERN-GAAKPRSSSIGSVG-RRTILG------GRXXXXXXXXXXXXXDALRGIGDLDAVAPSQEEIRVMIDRIRRESAVEEVVGAGGR 135 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14336.1 >prot_P-fluviatile_contig8.14336.1 ID=prot_P-fluviatile_contig8.14336.1|Name=mRNA_P-fluviatile_contig8.14336.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=430bp MPDSSSRFDHEAAPASGSNITSKLIRSARELGQQPSSAAPATNHRKRAGVback to top mRNA from alignment at P-fluviatile_contig8:547374..554976+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14336.1 ID=mRNA_P-fluviatile_contig8.14336.1|Name=mRNA_P-fluviatile_contig8.14336.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7603bp|location=Sequence derived from alignment at P-fluviatile_contig8:547374..554976+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:547374..554976+ >mRNA_P-fluviatile_contig8.14336.1 ID=mRNA_P-fluviatile_contig8.14336.1|Name=mRNA_P-fluviatile_contig8.14336.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2580bp|location=Sequence derived from alignment at P-fluviatile_contig8:547374..554976+ (Porterinema fluviatile SAG_2381)back to top |