mRNA_P-fluviatile_contig8.14317.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14317.1
Unique NamemRNA_P-fluviatile_contig8.14317.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:369167..370777 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1167
Cds size588
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14317.1prot_P-fluviatile_contig8.14317.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 369745..370777 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817214.6427593-UTR-P-fluviatile_contig8:369166..3697441622817214.6427593-UTR-P-fluviatile_contig8:369166..369744Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 369167..369744 -
1693571529.8831565-UTR-P-fluviatile_contig8:369166..3697441693571529.8831565-UTR-P-fluviatile_contig8:369166..369744Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 369167..369744 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817214.6536107-CDS-P-fluviatile_contig8:369744..3699751622817214.6536107-CDS-P-fluviatile_contig8:369744..369975Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 369745..369975 -
1693571529.8919122-CDS-P-fluviatile_contig8:369744..3699751693571529.8919122-CDS-P-fluviatile_contig8:369744..369975Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 369745..369975 -
1622817214.6653636-CDS-P-fluviatile_contig8:370420..3707771622817214.6653636-CDS-P-fluviatile_contig8:370420..370777Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 370421..370777 -
1693571529.90201-CDS-P-fluviatile_contig8:370420..3707771693571529.90201-CDS-P-fluviatile_contig8:370420..370777Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 370421..370777 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14317.1

>prot_P-fluviatile_contig8.14317.1 ID=prot_P-fluviatile_contig8.14317.1|Name=mRNA_P-fluviatile_contig8.14317.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=196bp
YQQGIHAQTSALPAPGDVPPPPPPRTQPQHQRLHEAAASAQQQAVGGGGG
HVYAPAPSVVSSSTPAPPAVPPAYQYPFAAYGGYGQHQPTAAEISAANSA
TASLNAAAAAATMAAYNPQSQHTAPTPPASQADIQAAAASAASAITAAHQ
RRHYMQQQQLLAAQQQQQQQQHQQSERAGGANGGSADLYAPYRSP*
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mRNA from alignment at P-fluviatile_contig8:369167..370777-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14317.1 ID=mRNA_P-fluviatile_contig8.14317.1|Name=mRNA_P-fluviatile_contig8.14317.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1611bp|location=Sequence derived from alignment at P-fluviatile_contig8:369167..370777- (Porterinema fluviatile SAG_2381)
TATCAACAGGGCATCCACGCCCAGACCTCAGCGCTGCCAGCACCGGGCGA
CGTGCCGCCACCGCCGCCCCCTCGAACCCAGCCGCAGCATCAACGGCTGC
ACGAAGCTGCGGCCTCTGCGCAGCAGCAGGCGGTAGGGGGAGGAGGAGGG
CACGTCTATGCGCCGGCGCCTTCCGTCGTCTCTTCTTCTACCCCTGCTCC
TCCTGCTGTTCCCCCCGCCTACCAGTACCCGTTTGCGGCCTACGGGGGGT
ACGGGCAACACCAGCCGACGGCGGCGGAGATCTCGGCGGCGAACTCGGCC
ACGGCCAGCCTGAACGCAGCGGCGGCGGCGGCGACGATGGCGGCGTATAA
CCCACAGGTGAGCTTCCAGAGACAAGTCGATTTCACGCTCTTTATGTGTT
GCCTACCTGCCCACGTGCGGTTCGTTGACGTCACCTTGCGTGCGCACGAA
AATTATGACAGGCCTGCCACTAGCCCCTGCGGCAGGCAGGAAATATGGAG
CTGCTTTCGCGGCCGCTCAGTAGTTTCTTTGCTGGAGTTGTTCCTCAAGA
AGCAGGCTTCATGGGTTGTTTCGCCGTTGCACGACTCTCAGTTGTTTGCT
GTCGGCCGGAAAGGTCTTAGTGTTATGTTCCTTGCGACAGGAAACGTGGC
TGCGTCGCGCCATGGGCTTGAGGGAGCCACTCTTCTTTCCTCCAGGTTTC
AATTTTGTTTCCCAACACGCACGGCTTTGAGGCCGTTTTTGCTAGATTGA
CATTTCTTCCCGGCCGCTTGTGCACGTGTGCTTCGTTTCTCGCCACCAGC
AGAGCCAGCACACCGCGCCCACCCCACCCGCGTCTCAGGCAGACATCCAA
GCTGCTGCTGCCTCTGCAGCGAGCGCTATAACGGCTGCCCATCAACGCAG
GCACTACATGCAGCAGCAGCAGCTTTTGGCAGCCCAGCAGCAGCAGCAGC
AGCAGCAACACCAGCAGTCGGAGCGTGCTGGCGGTGCGAACGGGGGAAGC
GCCGACCTGTATGCTCCGTATCGCTCTCCTTGAAGCAGCCACGCAAGGCT
TGTGACAGATATATTTTTGAAACTTAAGATCGGAGAGGACTCTGAGAATT
AATCAAGCGTGGGATTCGCTGCATGCATGCGAAATTGGGTGGTGTGTGCC
CGATTATTTCTTTGTTTTGCGAGGTACGGCGGTTTTTTTCTCACTCCAAG
ATTTTCACGGCGACGTTGAAATATCCTGAGAAGATAAAGACGGGAGGCTT
CCTCCGTTTTTTTGGCGACGCCCCCTCCTTCCCTCTTCCTCGCTCTCTCG
TTGGGGCACCCGAGAAGTCCCGGGAACGAATGGTTCCTTCCAGCATGCAG
CGAGTTTATCCCCCGCGAGCCCTCGTCGGTTGTGCTTGGTGCGCATGCCT
GCCAATGTTAGATCGAGAGAAGGCACATTTGCGCTTGTGTCCTTGCGTTT
TTTCGTGCGCTCTTATTTTTTTTGTGTGTGCTGTGTTGCGACAACTTGCG
GACCGAACTTCACAACACGGTCAGATTTTGTGCGTTCAGGTACAGCTTTA
GGTTGGCGCAGTGTTTTGTTTAGGAAAGTGGTGTGCTTTGTGTGAGGTTG
GATTGGGCGGG
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:369167..370777-

>mRNA_P-fluviatile_contig8.14317.1 ID=mRNA_P-fluviatile_contig8.14317.1|Name=mRNA_P-fluviatile_contig8.14317.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1176bp|location=Sequence derived from alignment at P-fluviatile_contig8:369167..370777- (Porterinema fluviatile SAG_2381)
TATCAACAGGGCATCCACGCCCAGACCTCAGCGCTGCCAGCACCGGGCGA
CGTGCCGCCACCGCCGCCCCCTCGAACCCAGCCGCAGCATCAACGGCTGC
ACGAAGCTGCGGCCTCTGCGCAGCAGCAGGCGGTAGGGGGAGGAGGAGGG
CACGTCTATGCGCCGGCGCCTTCCGTCGTCTCTTCTTCTACCCCTGCTCC
TCCTGCTGTTCCCCCCGCCTACCAGTACCCGTTTGCGGCCTACGGGGGGT
ACGGGCAACACCAGCCGACGGCGGCGGAGATCTCGGCGGCGAACTCGGCC
ACGGCCAGCCTGAACGCAGCGGCGGCGGCGGCGACGATGGCGGCGTATAA
CCCACAGTATCAACAGGGCATCCACGCCCAGACCTCAGCGCTGCCAGCAC
CGGGCGACGTGCCGCCACCGCCGCCCCCTCGAACCCAGCCGCAGCATCAA
CGGCTGCACGAAGCTGCGGCCTCTGCGCAGCAGCAGGCGGTAGGGGGAGG
AGGAGGGCACGTCTATGCGCCGGCGCCTTCCGTCGTCTCTTCTTCTACCC
CTGCTCCTCCTGCTGTTCCCCCCGCCTACCAGTACCCGTTTGCGGCCTAC
GGGGGGTACGGGCAACACCAGCCGACGGCGGCGGAGATCTCGGCGGCGAA
CTCGGCCACGGCCAGCCTGAACGCAGCGGCGGCGGCGGCGACGATGGCGG
CGTATAACCCACAGAGCCAGCACACCGCGCCCACCCCACCCGCGTCTCAG
GCAGACATCCAAGCTGCTGCTGCCTCTGCAGCGAGCGCTATAACGGCTGC
CCATCAACGCAGGCACTACATGCAGCAGCAGCAGCTTTTGGCAGCCCAGC
AGCAGCAGCAGCAGCAGCAACACCAGCAGTCGGAGCGTGCTGGCGGTGCG
AACGGGGGAAGCGCCGACCTGTATGCTCCGTATCGCTCTCCTTGAAGCCA
GCACACCGCGCCCACCCCACCCGCGTCTCAGGCAGACATCCAAGCTGCTG
CTGCCTCTGCAGCGAGCGCTATAACGGCTGCCCATCAACGCAGGCACTAC
ATGCAGCAGCAGCAGCTTTTGGCAGCCCAGCAGCAGCAGCAGCAGCAGCA
ACACCAGCAGTCGGAGCGTGCTGGCGGTGCGAACGGGGGAAGCGCCGACC
TGTATGCTCCGTATCGCTCTCCTTGA
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