mRNA_P-fluviatile_contig8.14316.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14316.1 vs. uniprot
Match: D7FTP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP1_ECTSI) HSP 1 Score: 198 bits (503), Expect = 8.250e-58 Identity = 138/321 (42.99%), Postives = 162/321 (50.47%), Query Frame = 1
Query: 1 ETLAVMIGNAQQAVVDSAEHDFERGEREARTQAVATGMPHPLVVPKRKPMGVVNRDEKGTSNSGGTXXXXXXXXXAAGVPG-----------GRLRTDRERRLEAARTKRWLDRMWAFASKLRGTKAFVLELEAETPLQFLDSSWARANLPASWLSEELFLTPGYAAERFATWRRSLYTQASRLRKRARQHMEENQLRMEAAVEKAAAMADTEEGKRLTGLEEELIRLGLSKDLLAETMGEKEEETARRLREAKDKQATCCFRPLLRFMEDHASLDSALRACTEYLLGPRELRIQSGPNVLVAEIQGLDMFESLSAAQPEG 930
ETLA MI N +QAV DSAEHD R EREARTQ A GM HPLVVPKR+ G V GG+ ++G GRL T+R +R + +T +WLDRMWAFA+KLRG KAF L+LEA +PL+FL+SSWARA +SK LLAE MGEKEEET RRLREAKDKQ ME++A L+ AL ACT+YLLGPRELRIQSG NVLVAE QGLD+ ++LSAA+ G
Sbjct: 38 ETLASMIDNVRQAVADSAEHDVGRVEREARTQKNAPGMRHPLVVPKRRVAGSVREGRGAGLPGGGSGGVGQKKSESSGGTSAEMAAIITPTRGRLLTERGKRFQDTKTSKWLDRMWAFAAKLRGAKAFALDLEASSPLEFLESSWARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------XXXXVSKALLAEAMGEKEEETVRRLREAKDKQ-----------MEEYAELEDALLACTKYLLGPRELRIQSGHNVLVAEFQGLDILDALSAARHPG 300 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14316.1 >prot_P-fluviatile_contig8.14316.1 ID=prot_P-fluviatile_contig8.14316.1|Name=mRNA_P-fluviatile_contig8.14316.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=320bp MIGNAQQAVVDSAEHDFERGEREARTQAVATGMPHPLVVPKRKPMGVVNRback to top mRNA from alignment at P-fluviatile_contig8:356167..360678+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14316.1 ID=mRNA_P-fluviatile_contig8.14316.1|Name=mRNA_P-fluviatile_contig8.14316.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4512bp|location=Sequence derived from alignment at P-fluviatile_contig8:356167..360678+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:356167..360678+ >mRNA_P-fluviatile_contig8.14316.1 ID=mRNA_P-fluviatile_contig8.14316.1|Name=mRNA_P-fluviatile_contig8.14316.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1920bp|location=Sequence derived from alignment at P-fluviatile_contig8:356167..360678+ (Porterinema fluviatile SAG_2381)back to top |