mRNA_P-fluviatile_contig8.14315.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14315.1 vs. uniprot
Match: D7FTP2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP2_ECTSI) HSP 1 Score: 582 bits (1499), Expect = 1.060e-201 Identity = 315/472 (66.74%), Postives = 363/472 (76.91%), Query Frame = 1
Query: 19 PWAEVDPGEQNAARFDALGNGLPQSSSEEEGADGAGDQVNHEERIY--VAALRRRRAYIIAQLHNVGQSIRETEAEVLSRQPLPEIPRRSLAPKDTVDESNTGSFLQAVNWQAGTDDGPGPKPLTERWAMERAEALQRLFDADGDGCLNFDEFRAYLVRLGRDKGQLGERLTTDREFWLSYVMDQAGPPAISDTAGTISFDGTSLTRSGFVGHRRMVEREHPLEVDLLELGLDLLPECLQRWLKAKDAFDRIGAEAVAAAAERGEREGDAQG-YHGSIERGEMQLLLADSGEVMSKLRIEEELILASKRAKVLLQIVEERRKRNRRMADTPVPSRAAAFDSKRVYRAAWLSWFMSGRAKEENETSWLEQGLIRIKTGLSRGFRSFYSMVGYPKTVLENLAHQGLISL---------------------NILSPLKSSDATATLRAAIGDAEDDGRGFSVSINYIHKGNASTE 1362
PWAE++PGE RFD LGN L +SS +AALRRRRAYIIAQLHNVGQSIRETEAEVL+ + +PEI +R LAP+DTVDES TGSFL AVNW AGTDDGPGPKPLT+R AM+RA AL RLFDADGDGCL+FDEFRAYLVRLGRDKG+LGERLTT+REFWLSYV DQAGPPA +D G +SFDG LT+SGFVGHRRMVE +HPLEVDLL +GLDLLPE LQRWL+ K+AFDRI AE V+AA ERGER ++G Y GS++RGE QLLLAD+GEVMSKLR+EEEL LA+ AK++L++VEERRKRNR +A T SR+A D++R+YR AWLSWFMSGRAKEE ETSWLE+ LIR+KT L RGFR+ YS+VG P+ VLE L QGLIS N+L+P K SDA ATLRAAIGDAEDDG GFSVS+N++HKGN E
Sbjct: 3 PWAELNPGE---GRFDQLGNSLLESSXXXXXXXXXXXXXXXXXXXXXXIAALRRRRAYIIAQLHNVGQSIRETEAEVLAGKCVPEISKRDLAPQDTVDESKTGSFLHAVNWSAGTDDGPGPKPLTDR-AMDRARALLRLFDADGDGCLSFDEFRAYLVRLGRDKGKLGERLTTNREFWLSYVADQAGPPAAADVGGAVSFDGC-LTQSGFVGHRRMVEADHPLEVDLLTMGLDLLPESLQRWLRVKNAFDRIDAEGVSAATERGERGAKSRGDYDGSVDRGEAQLLLADAGEVMSKLRVEEELTLATMHAKLMLEVVEERRKRNR-LAHTQALSRSAVNDAQRIYRTAWLSWFMSGRAKEERETSWLEKNLIRLKTRLYRGFRACYSLVGRPRRVLEELVQQGLISCTSLILNPTGRFDDVTLYGVAANLLAPFKGSDARATLRAAIGDAEDDGSGFSVSLNFLHKGNGVWE 468
BLAST of mRNA_P-fluviatile_contig8.14315.1 vs. uniprot
Match: A0A7S2SK77_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SK77_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 7.480e-17 Identity = 75/266 (28.20%), Postives = 137/266 (51.50%), Query Frame = 1
Query: 1021 AFDSKRVYRAAWLSWFMSGRAKEENETSWLEQGLIRIKTGLSRGFRSFYSMVGYPKTVLENLAHQGLISLNILSPLKSSDATATLRAAIGDAEDDG---RGFSVSINYIHKGNASTENPVDALPPGVGLAATLDLESKHEVADQALDTAAAAVEKVVRIHALPELRRSVLFHSMRV-SVASLPDKSQVLRVAFFWRTQANIDYQCRQLKLGLRPTDLLRELSISLFCPLQLSQILASSKTVLNDRLKVSLSAEGCFCGPLVSKLIE 1806
+ + K +YRA+ ++ + S K + E I+ K+ + R +R + L +++ +GLI ++++ LK + +G D+G GFS++++ N++ +P G+G A +D + EV D+A+ AA+A+E V+ H EL R F RV D VLRVAF W+ +++ID+ R+L +G++ +D+L +L+++L L L+ IL KT++++ L V + LV+KL+E
Sbjct: 6 SLNPKALYRASTVALWFSNWPKLPHRD--FEAAAIQFKSIIRRAYRMGLHGLKSVMGTLNSVSERGLIVDSLVARLKQEVGRYGMEFRLG--ADEGVLDAGFSMTLSLRKLANSTAGFAELGMPGGLGTAFLVDFLIRSEVPDKAVTRAASALEAVLNEHCKYELERIPSFKLFRVFKHTHEADHVPVLRVAFAWKPESSIDFVLRRLNIGVKFSDILLDLTMTLQSSLGLTDILEGRKTIIDESLNVQATGNLVCARRLVAKLLE 267
BLAST of mRNA_P-fluviatile_contig8.14315.1 vs. uniprot
Match: D7FTP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP1_ECTSI) HSP 1 Score: 56.6 bits (135), Expect = 5.630e-5 Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 1
Query: 1705 QILASSKTVLNDRLKVSLSAEGCFCGPLVSKLIE 1806
+IL S VL+DRLKVS+SAEGCFCGPLVSKL+E
Sbjct: 4 EILESRTLVLDDRLKVSISAEGCFCGPLVSKLLE 37 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14315.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14315.1 >prot_P-fluviatile_contig8.14315.1 ID=prot_P-fluviatile_contig8.14315.1|Name=mRNA_P-fluviatile_contig8.14315.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=603bp MAESQPPWAEVDPGEQNAARFDALGNGLPQSSSEEEGADGAGDQVNHEERback to top mRNA from alignment at P-fluviatile_contig8:344066..355694+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14315.1 ID=mRNA_P-fluviatile_contig8.14315.1|Name=mRNA_P-fluviatile_contig8.14315.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11629bp|location=Sequence derived from alignment at P-fluviatile_contig8:344066..355694+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:344066..355694+ >mRNA_P-fluviatile_contig8.14315.1 ID=mRNA_P-fluviatile_contig8.14315.1|Name=mRNA_P-fluviatile_contig8.14315.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3618bp|location=Sequence derived from alignment at P-fluviatile_contig8:344066..355694+ (Porterinema fluviatile SAG_2381)back to top |