mRNA_P-fluviatile_contig8.14306.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14306.1
Unique NamemRNA_P-fluviatile_contig8.14306.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig8.14306.1 vs. uniprot
Match: A0A6H5LRL5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRL5_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 8.730e-99
Identity = 196/352 (55.68%), Postives = 225/352 (63.92%), Query Frame = 1 
Query: 1378 IPPPLPFMLRPLEDAWSMV*QLRHAKHE*PPPSLLGCSKRTSNAAVRAELGIQSLRSGRDARRLAWQYRMCGMGEERLPFFVWEAKWANKERGRKPTEWVKVVEDVWKGLDIDEDETLETEGLMGFKETISVACAQRQ-QNLNNEAKDK-GLKVCGMLNEEIGFKDYLHGPMDSGTKLNV*FRTGDIAFEN-------VDEDIGR*TTKTASS-----NVIAASNAKTVFM*SRNVRGARRGKCP*L------SW---EK*MGCTGRCLRHGIERKGR*LYWGTGVGLKGGKGYHEDRQTREDIFEPPVWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKT*EYAPP 2364
            I PPL +     E    +V +L  A+ +    ++LGCS+RTSNAAVRAELGIQSLRSGRDAR+L WQYRMCGMGEERLP  VWEAKWANK+RGR+PTEWVKVVEDVWKGLDIDEDETLETEGL GFKE ISVACA+R+ QNL  E+KDK GL+V GML E IGFKDYLHGPMD+GTKL V FRTGDI           VDE+                +V+A      ++   R V     GK          +W   E+ +   G   R  +E+ GR +                DR  +   F   +WQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKT    PP
Sbjct:  123 IVPPLEYAGEVWEGNKKVVKELEAAQMK-AAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAEC---PLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVLGH--RRWVEKAGRDIV-------------RIDRLGK--TFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKTQRVRPP 453
[Close]
BLAST of mRNA_P-fluviatile_contig8.14306.1 vs. uniprot
Match: A0A6H5KMG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG6_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 1.470e-96
Identity = 191/346 (55.20%), Postives = 220/346 (63.58%), Query Frame = 1 
Query: 1378 IPPPLPFMLRPLEDAWSMV*QLRHAKHE*PPPSLLGCSKRTSNAAVRAELGIQSLRSGRDARRLAWQYRMCGMGEERLPFFVWEAKWANKERGRKPTEWVKVVEDVWKGLDIDEDETLETEGLMGFKETISVACAQRQ-QNLNNEAKDK-GLKVCGMLNEEIGFKDYLHGPMDSGTKLNV*FRTGDIAFEN-------VDEDIGR*TTKTASS-----NVIAASNAKTVFM*SRNVRGARRGKCP*L------SW---EK*MGCTGRCLRHGIERKGR*LYWGTGVGLKGGKGYHEDRQTREDIFEPPVWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKT 2346
            I PPL +     E    +V +L  A+ +    ++LGCS+RTSNAAVRAELGIQSLRSGRDAR+L WQYRMCGMGEERLP  VWEAKWANK+RGR+PTEWVKVVEDVWKGLDIDEDETLETEGL GFKE ISVACA+R+ QNL  + KDK GL+V GML E IGFKDYLHGPMD+GTKL V FRTGDI           VDE+                +V+A      ++   R V     GK          +W   E+ +   G   R  +E+ GR +                DR  +   F   +WQSRKERLAIGDRSCGNNAPSS G VVNGLTAKACKT
Sbjct:   37 IVPPLEYAGEVWEGNKKVVKELEAAQMK-AAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKQIKDKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAEC---PLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVVGH--RRWVEKAGRDIV-------------RIDRLGK--TFLSHLWQSRKERLAIGDRSCGNNAPSSGGCVVNGLTAKACKT 361
[Close]
BLAST of mRNA_P-fluviatile_contig8.14306.1 vs. uniprot
Match: A0A6H5JT82_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT82_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 4.020e-95
Identity = 192/337 (56.97%), Postives = 217/337 (64.39%), Query Frame = 1 
Query: 1378 IPPPLPFMLRPLEDAWSMV*QLRHAKHE*PPPSLLGCSKRTSNAAVRAELGIQSLRSGRDARRLAWQYRMCGMGEERLPFFVWEAKWANKERGRKPTEWVKVVEDVWKGLDIDEDETLETEGLMGFKETISVACAQRQ-QNLNNEAKDK-GLKVCGMLNEEIGFKDYLHGPMDSGTKLNV*FRTGDIAFEN-------VDEDIGR*TTKTASS-----NVIAASNAKTVFM*SRNVRGARRGKCP*LSWEK*MGCTGRCLRHGIERKGR*LYWGTGVGLKGGKGYHEDRQTREDIFEPPVWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKT 2346
            I PPL +     E    +V +L  A+ +     +LGCS RTSNAAVRAELGIQSLRSGRDAR+L WQYRMCGMGEERLP  VWEAKWANK+RGR+PTEWVKVVEDVWKGLDIDEDETLETEGL GFKE ISVACA+R+ QNL  E+KDK GL+V GML E IGFKDYLHGPMD+GTKL V FRTGDI           VDE+                +V+A      ++   R V     GK         +  T R +     R+ R     T V L    G+    +T    F   +WQSRKERLAIGDR C NNAPSSRGRVVNGLTAKACKT
Sbjct:   81 IVPPLEYAGEVWEGNKKVVKELEAAQMK-AAKIILGCSTRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAEC---PLYKKEREVYVTELGK---------IDGTYREMFEAWNREER-----TVVVL----GHSRLGET----FLSHLWQSRKERLAIGDRFCRNNAPSSRGRVVNGLTAKACKT 391
[Close]
BLAST of mRNA_P-fluviatile_contig8.14306.1 vs. uniprot
Match: A0A6H5KUW5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUW5_9PHAE)

HSP 1 Score: 323 bits (828), Expect = 6.340e-95
Identity = 193/346 (55.78%), Postives = 223/346 (64.45%), Query Frame = 1 
Query: 1378 IPPPLPFMLRPLEDAWSMV*QLRHAKHE*PPPSLLGCSKRTSNAAVRAELGIQSLRSGRDARRLAWQYRMCGMGEERLPFFVWEAKWANKERGRKPTEWVKVVEDVWKGLDIDEDETLETEGLMGFKETISVACAQRQ-QNLNNEAKDK-GLKVCGMLNEEIGFKDYLHGPMDSGTKLNV*FRTGDIAFEN-------VDEDIGR*TTKTASS-----NVIAASNAKTVFM*SRNVRGARRGKCP*L------SW---EK*MGCTGRCLRHGIERKGR*LYWGTGVGLKGGKGYHEDRQTREDIFEPPVWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKT 2346
            I PPL +     E    +V +L  A+ +    ++LGCS+RTSNAAVRAELGIQSLRSGRDAR+L WQYRMCGMGEERLP  VWEAKWANK+RGR+PTEWVKVVEDVWKGLDIDEDETLETEGL GFKE ISVACA+R+ QNL  E+KDK GL+V GML E IGFKDYLHGPMD+GTKL V FRTGDI           VDE+                +V+A      ++   R V     GK          +W   E+ +   G   R  +E+ GR +                DR  +   F   +WQSRKERLAIGDRSCGNNAPSSRGRVVNGL+AKACKT
Sbjct:  340 IVPPLEYAGEVWEGNKKVVKELEAAQMK-AAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAEC---PLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVLGH--RRWVEKAGRDIV-------------RIDRLGK--TFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLSAKACKT 664
[Close]
BLAST of mRNA_P-fluviatile_contig8.14306.1 vs. uniprot
Match: A0A6H5JI54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI54_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 9.180e-95
Identity = 188/336 (55.95%), Postives = 216/336 (64.29%), Query Frame = 1 
Query: 1378 IPPPLPFMLRPLEDAWSMV*QLRHAKHE*PPPSLLGCSKRTSNAAVRAELGIQSLRSGRDARRLAWQYRMCGMGEERLPFFVWEAKWANKERGRKPTEWVKVVEDVWKGLDIDEDETLETEGLMGFKETISVACAQR-QQNLNNEAKDK-GLKVCGMLNEEIGFKDYLHGPMDSGTKLNV*FRTGDIAFEN-------VDEDIGR*TTKTASS-----NVIAASNAKTVFM*SRNVRGARRGKCP*LSWEK*MGCTGRCLRHGIERKGR*LYWGTGVGLKGGKGYHEDRQTREDIFEPPVWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACK 2343
            I PPL +     E    +V +L  A+ +    ++LGCS+RTSNAAVRAELGIQSLRSGRDAR+L WQYRMCGMGEERLP  VWEAKWANK+RGR+PTEWVKVVEDVWKGLDIDEDETLETEGL GFKE ISVACA+R QQNL  E+KDK GL+V GML E IGFKDYLHGPMD+GTKL V FRTGDI           VD++  +      S      +V+A      ++   R V      K     WE       R  +  +    R   W    G   G+            F   +WQSRKERLAIGDRSCG+NAPSSRGRVV+ LTAKACK
Sbjct:  122 IVPPLEYAGEVWEGNKKVVKELEAAQMK-AAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREQQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDDEDDKFKCDCGSECEDGVHVVAEYQ---LYEKEREVYTTELVKVEGRYWEM-FEAWNREKKVAVLVHRR---WFDKAGSYIGRIDIVRIDRLGKTFLNHLWQSRKERLAIGDRSCGHNAPSSRGRVVSSLTAKACK 449
[Close]
BLAST of mRNA_P-fluviatile_contig8.14306.1 vs. uniprot
Match: A0A6H5L4L1_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4L1_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 3.990e-94
Identity = 191/349 (54.73%), Postives = 218/349 (62.46%), Query Frame = 1 
Query: 1378 IPPPLPFMLRPLEDAWSMV*QLRHAKHE*PPPSLLGCSKRTSNAAVRAELGIQSLRSGRDARRLAWQYRMCGMGEERLPFFVWEAKWANKERGRKPTEWVKVVEDVWKGLDIDEDETLETEGLMGFKETISVACAQRQ-QNLNNEAKDK-GLKVCGMLNEEIGFKDYLHGPMDSGTKLNV*FRTGDIAFENVDEDIGR*TTKTASSNVIAASNAKTVFM*SRNVRGARRGKCP*LSWEK*MGCTGRCLRHGIERKGR*LYWGT--GVGLKGGKGYHEDRQT-------------REDI---------FEPPVWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKT 2346
            I PPL +     E    +V +L  A+ +    ++LGCS+RTSNAAVRAELGIQSLRSGRDAR+L WQYRMCGMGEERLP  VWEAKWANK+RGR+PTEWVKVVEDVWKGLDIDEDETLETEGL GFKE ISVACA+R+ QNL  E+KDK GL+V GML E IGFKDYLHGPMD+GTKL V FRTGDI              +     V    N                 KC     E  +     CL +  ER+     WG   G   +  + ++ + +T               DI         F   +WQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKT
Sbjct:  460 IVPPLEYAGEVWEGNKKVVKELEAAQMK-AAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRE---------RRRRHRKVDDEDNEL---------------KCDGFECEDRVHVVAECLWYKKEREVYVTGWGKIDGTYREMFEAWNREERTVAVLGHRRWVEKAGRDIVRIDRLGKTFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKT 783
[Close]
BLAST of mRNA_P-fluviatile_contig8.14306.1 vs. uniprot
Match: A0A6H5KS87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS87_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 4.840e-94
Identity = 186/326 (57.06%), Postives = 210/326 (64.42%), Query Frame = 1 
Query: 1477 LLGCSKRTSNAAVRAELGIQSLRSGRDARRLAWQYRMCGMGEERLPFFVWEAKWANKERGRKPTEWVKVVEDVWKGLDIDEDETLETEGLMGFKETISVACAQRQQ-NLNNEAKDK-GLKVCGMLNEEIGFKDYLHGPMDSGTKLNV*FRTGDIAFEN-------VDEDIGR*TTKTASS-----NVIAASNAKTVFM*SRNVRGARRGKCP*L------SW---EK*MGCTGRCLRHGIERKGR*LYWGTGVGLKGGKGYHEDRQTREDIFEPPVWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKACKT*EY---APPSLLS 2376
            +LGCSKRTSNAAVRAELGIQSLRSGRDAR+L WQYRMCGMGEERLP  VWEAKWANK+RGR+PTEWVKVVEDVWKGLDIDEDETLETEGL GFKE ISVACA+R++ NL  E KDK GL+V GML E IGFKDYLHGPMD+GTKL V FRTGDI           VDE+                +V+A      ++   R V     GK          +W   E+ +   G   R  +E+ GR +     +G                     +WQSRKERLAIGDRSCGNNAPSSRGRVVN LTA ACKT E     P +LL+
Sbjct:   62 ILGCSKRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEKNLRKETKDKEGLQVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCGFECEDRVHVVAEC---PLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVLGH--RRWVEKAGRDIVTIARLGK---------------ALLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNSLTANACKTKEVLVMTPNALLN 367
[Close]
BLAST of mRNA_P-fluviatile_contig8.14306.1 vs. uniprot
Match: A0A6H5K739_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K739_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 9.230e-94
Identity = 190/335 (56.72%), Postives = 218/335 (65.07%), Query Frame = 1 
Query: 1378 IPPPLPFMLRPLEDAWSMV*QLRHAKHE*PPPSLLGCSKRTSNAAVRAELGIQSLRSGRDARRLAWQYRMCGMGEERLPFFVWEAKWANKERGRKPTEWVKVVEDVWKGLDIDEDETLETEGLMGFKETISVACAQRQ-QNLNNEAKDK-GLKVCGMLNEEIGFKDYLHGPMDSGTKLNV*FRTGDIAFENVDEDIGR*TTKTASSNVIAASNAKTVFM*SRNVRGARRGKCP*LSWEK*MGCTGRCLRHGIERKGR*LYWGTG-----VGLKGGKGYHE---------DRQTREDIFEPPVWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAK 2334
            I PPL +     E    +V +L  A+ +    ++LGCS+RTSNAAVRAELGIQSLRSGRDAR+L WQYRMCGMGEERLP  VWEAKWANK+RGR+PTEWVKVVEDVWKGLDIDEDETLETEGL GFKE ISVACA+R+ QNL  E+KDK GL+V GML E IGFKDYLHGPMD+GTKL V FRTGDI      E   R  T     +          F     V      +CP    E+ +  T      G  R+   ++  TG     V + G + + E         DR  +   F   +WQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAK
Sbjct:  195 IVPPLEYAGEVWEGNKKVVKELEAAQMK-AAKTILGCSRRTSNAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLR---ERRRRHRTVDEEDDEFKCDCG---FECEDRVHVV--AECPLYKKEREVYVTELGKIDGTYRE---MFEATGDEERTVAVLGHRRWFEQAGRYIVRIDRLGK--TFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAK 515
[Close]
BLAST of mRNA_P-fluviatile_contig8.14306.1 vs. uniprot
Match: A0A6H5JJA8_9PHAE (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA8_9PHAE)

HSP 1 Score: 306 bits (785), Expect = 2.040e-91
Identity = 175/297 (58.92%), Postives = 200/297 (67.34%), Query Frame = 1 
Query: 1477 LLGCSKRTSNAAVRAELGIQSLRSGRDARRLAWQYRMCGMGEERLPFFVWEAKWANKERGRKPTEWVKVVEDVWKGLDIDEDETLETEGLMGFKETISVACAQRQQNLNNEAKDK-GLKVCGMLNEEIGF-KDYLHGPMDSGTKLNV*FRTGDIAF-ENVDEDIGR*TTKTASSNVIAASNAKTVFM*SRNVRGARRGKCP*L------SWEK*MGCTGRCLRHG--IERKGR*LYWGTGVGLKGGKGYHEDRQTREDIFEPPVWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAK 2334
            +LGCSKRTSNAAVRAELGIQSLRSGRDAR+L WQYR+CGMGEERLP  VWEAKWANK+RGRKPTEWVKVVEDVWKGLDIDEDETLETEGL GFKE ISVACA+R+QNL  E+KDK GL+V G+L E I F KDYLHGPMD+GTKL V FR GDI   E  ++D  +        + +        +   R V     GK          +W +  G T   + H   +E+ G  +     +G               + F   +WQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAK
Sbjct:  159 ILGCSKRTSNAAVRAELGIQSLRSGRDARKLTWQYRICGMGEERLPRIVWEAKWANKKRGRKPTEWVKVVEDVWKGLDIDEDETLETEGLKGFKEKISVACAEREQNLRKESKDKEGLQVYGILKEGIAFFKDYLHGPMDAGTKLKVKFRPGDIGLRERREDDEFKCDCGFECEDRVLVVAECPWYKKEREVYVTELGKIDGTYGEMFEAWNR-EGRTVAVVGHRRWVEKAGSDIVRIYRLG---------------ETFLSYLWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAK 439
[Close]
BLAST of mRNA_P-fluviatile_contig8.14306.1 vs. uniprot
Match: A0A6H5KV30_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV30_9PHAE)

HSP 1 Score: 311 bits (797), Expect = 1.730e-90
Identity = 185/329 (56.23%), Postives = 210/329 (63.83%), Query Frame = 1 
Query: 1411 LEDAWSMV*QLRHAKHE*PPPSLLGCSKRTSNAAVRAELGIQSLRSGRDARRLAWQYRMCGMGEERLPFFVWEAKWANKERGRKPTEWVKVVEDVWKGLDIDEDETLETEGLMGFKETISVACAQRQ-QNLNNEAKDK-GLKVCGMLNEEIGFKDYLHGPMDSGTKLNV*FRTGDIAFEN-------VDE--DIGR*TTKTASSNVIAASNAKTVFM*SRNVRGARRGKCP*L------SW---EK*MGCTGRCLRHGIERKGR*LYWGTGVGLKGGKGYHEDRQTREDIFEPPVWQSRKERLAIGDRSCGNNAPSSRGRVVNGLTAKA 2337
            +ED W  +        E     +LGCSKRTS+AAVRAELGIQSLRSGRDAR+L WQYRMCGMGEERLP  VWEAKWANK+RGR+PTEWVKVVEDVWKGLDIDEDETLETEGL GFKE ISVACA+R+ QNL  E+KDK GL+V GML E IGFKDYLHGPMD+GTKL V FRTGDI           VDE  D  +        + +       ++   R V     GK          +W   E+ +   G   R  +E+ GR +                DR  +   F   +WQSRKERLAIGDRSCGNNAPSSRGRVV GLTAKA
Sbjct:  352 VEDVWKGLDIDEDETPEKEAKIILGCSKRTSDAAVRAELGIQSLRSGRDARKLTWQYRMCGMGEERLPRIVWEAKWANKKRGRQPTEWVKVVEDVWKGLDIDEDETLETEGLQGFKEKISVACAEREEQNLRKESKDKEGLEVYGMLKEGIGFKDYLHGPMDAGTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFKCDCDFECDDRVHVVAECPLYKKEREVYVTELGKIDGTYREMFEAWNREERTVAVLGH--RRWVEKAGRDIV-------------RIDRLGK--TFLSHLWQSRKERLAIGDRSCGNNAPSSRGRVVIGLTAKA 663
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14306.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LRL5_9PHAE8.730e-9955.68Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMG6_9PHAE1.470e-9655.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT82_9PHAE4.020e-9556.97Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUW5_9PHAE6.340e-9555.78Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JI54_9PHAE9.180e-9555.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4L1_9PHAE3.990e-9454.73Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KS87_9PHAE4.840e-9457.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K739_9PHAE9.230e-9456.72Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JJA8_9PHAE2.040e-9158.92tRNA (adenine(58)-N(1))-methyltransferase non-cata... [more]
A0A6H5KV30_9PHAE1.730e-9056.23Reverse transcriptase domain-containing protein n=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:219999..225095 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score83.2
Seed ortholog evalue8.4e-14
Seed eggNOG ortholog2880.D7G873
KEGG rclassRC00003,RC00004,RC00039,RC00041,RC00060,RC00181,RC00496
KEGG koko:K11367,ko:K11424,ko:K11654,ko:K13506,ko:K14437
KEGG ReactionR00851,R03875,R03938,R04866,R04867,R09380
KEGG Pathwayko00310,ko00561,ko00564,ko01100,ko01110,ko05202,map00310,map00561,map00564,map01100,map01110,map05202
KEGG ModuleM00089
EggNOG free text desc.SET domain
EggNOG OGsCOG0553@1,COG2940@1,COG5076@1,KOG0383@2759,KOG0384@2759,KOG1075@1,KOG1075@2759,KOG1081@2759,KOG1474@2759
EC2.1.1.43,2.3.1.15,3.6.4.12
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko03021,ko03036
Hectar predicted targeting categoryother localisation
Exons2
Model size2832
Cds size330
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14306.1prot_P-fluviatile_contig8.14306.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 223848..224177 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817220.2341044-UTR-P-fluviatile_contig8:219998..2201101622817220.2341044-UTR-P-fluviatile_contig8:219998..220110Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 219999..220110 +
1693571549.3896997-UTR-P-fluviatile_contig8:219998..2201101693571549.3896997-UTR-P-fluviatile_contig8:219998..220110Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 219999..220110 +
1622817220.248295-UTR-P-fluviatile_contig8:222375..2238471622817220.248295-UTR-P-fluviatile_contig8:222375..223847Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 222376..223847 +
1693571549.6652749-UTR-P-fluviatile_contig8:222375..2238471693571549.6652749-UTR-P-fluviatile_contig8:222375..223847Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 222376..223847 +
1622817220.2691896-UTR-P-fluviatile_contig8:224177..2250951622817220.2691896-UTR-P-fluviatile_contig8:224177..225095Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 224178..225095 +
1693571550.1706762-UTR-P-fluviatile_contig8:224177..2250951693571550.1706762-UTR-P-fluviatile_contig8:224177..225095Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 224178..225095 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817220.2583628-CDS-P-fluviatile_contig8:223847..2241771622817220.2583628-CDS-P-fluviatile_contig8:223847..224177Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 223848..224177 +
1693571549.682153-CDS-P-fluviatile_contig8:223847..2241771693571549.682153-CDS-P-fluviatile_contig8:223847..224177Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 223848..224177 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14306.1

>prot_P-fluviatile_contig8.14306.1 ID=prot_P-fluviatile_contig8.14306.1|Name=mRNA_P-fluviatile_contig8.14306.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=110bp
MCGMGEERLPFFVWEAKWANKERGRKPTEWVKVVEDVWKGLDIDEDETLE
TEGLMGFKETISVACAQRQQNLNNEAKDKGLKVCGMLNEEIGFKDYLHGP
MDSGTKLNV*
back to top

mRNA from alignment at P-fluviatile_contig8:219999..225095+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14306.1 ID=mRNA_P-fluviatile_contig8.14306.1|Name=mRNA_P-fluviatile_contig8.14306.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5097bp|location=Sequence derived from alignment at P-fluviatile_contig8:219999..225095+ (Porterinema fluviatile SAG_2381)
AAAGCATTCGATCAAAATGCCCCAACGTCAGCCACCCACGGGAGCTTGAG
AGGAGAGGGACCAATTCTGCAACACCCGCACCCGATCCCGTTGAATAACC
GACGAGGAGCAGGTGCGTTTATGTTCCTCTGCCAAGCAAGTGCCCTGCGG
TTGATCATTGTGTGCTCGCATCTGTGCACACCCGCGCGCGTATCTCTTTC
TCTCGGGGTGGTTAAAGCGGTTGAGTGGATGTCGGTGCGGGAGGGGACGC
ATCTCACATATCGCTCCGGCCTTTGCCCTTGCTCGCGCGTCAAAGATTCT
CTCACCGAGAGGATTCGACGCCATGCAGCTGGTAAAGCTGTGCCGCGAGC
TTTTCCGCGGACTGTCGAGATGCATCGGGGGTGTTCCTGTAACAGCGATC
TCGAGGGCTTCGATTTGAAGTGTTGCCAGTTAGAGTTTTCTGCGATGGGT
CCCTCTATCCCCCTAACTCCGAGTCGCCTGAAGAGAGCCCGGTTGCTCGC
GAACAAACTCTCTGGTGCAGACCTATTGTCGGGGCGCTGAGGTGATGATT
TTACCCCAGCAAAAACTTAGCCGTTTACCCGTCATACTCCTCTTTCACGA
GAGCTATGGTGAGTCGCGCTCGAATGAGCCTCCGCGCCCGGACACCTCCC
GACTCACGCTGCTGCATATCCAAGCACCACACATATGCGCGAATGACAGG
AACATTCGACCCCTCTCGTCCCGCTCGGGACCAATCGACACGCCGGAACG
CACGGTTAATTAGTGAGCCACCCCGCCCCAAGAAGTGCTCAGCAACAGAT
TTCGGTCGACACACATGCGGTGTCTTTGACGTGGCGTGGAAGTCAAGTTT
CTCGGCAGCGCCGACTGCACACGAGTGTTCTTCCCGAGAGCGCTGACTGC
ACAAGGGTGGTCCGAAATGATTCATGGCGGAAAAGAGGCAGCATCAACAA
GTCTTCGTGCGTACACTACACCCCCTTACCCCCCGCACGCGCGAGCTAGG
TGTTGGCATCGCCATGTTCGCAAGAAATACAGCACCGGCCACCTCTCCAT
CTCTCCCTCTCTCTCGCTCTCTCCCTCCCTCCCTCCCCCACACCCTTCTC
TCTCTTCGTACACGTTGGTGCGACCACTTTCCAGCAACGTACGAATGTTC
GCGAAGCGATCACCAAGGGGATATATCAAACCCTTCATTTGTCCGCTGGC
CTGTCTGTGGGGGGAGGGGGAAGAGGGGTGTTGCGTCGTGGTGTTCGTCA
TGCGCGTGTGAAAAGTGAGCCCACGTACGAGGGGGTGATGAGAACGAATA
TTTCATACATCCATTGATGACAACCGAAAACTACAGTCTTCAAAGTTCAC
TGACCCTTGCTCACTTCACGCCTTCATTCGGCCTTACAGCAGTTCCCGAA
AAGAAGAAAATGACGGCCGTTTGCTTTTTTTTGCGGTCTCCCTGTTTGTT
GCGGTCCATTCTTAGGCGAGCCCATTTGTCAGCGTGCATGCTCCCTCGTA
CGTTGAGTTGTAGCGGTTGTTTGAAGCCGAACACACAAGTGATACGGTCG
CCAGAAAGCATTTTTTTGTCCCAGCATATGCGGGATTTTTACTCTCTTAT
CTAGACTTGATTCGTCATCGGCATTTCAGATTTTTACTGCTCAATGATTA
GAAGCATGATAAAGAGGATTACGCAAAAGCGCAGGAATGATTACACACAA
TCATCCTGGAGTCCCATCTTGGCCCAGTTTCTGGACCACAGGACGATGCC
GGGCTATATATGTCATAGTTACACTGACCTGCGCTCTTCGATAAAAACCT
CAGAAACCCTCCTCAAAAAACCATCAAACCATCACAGAAGGAACAACACT
ACAACAACGAACTCACGTTGCCTCCTCAGGTGGTGTGAGGTAAAGAACTC
CTCTCGTATCAGCCCGGCGCATGGGCTTTCGCAGGTCATTCTTGCGTGTA
CAGTTGCCGCGAGCTTGTCCGTAGCGTGTGCGTAGTTTTGATTTTACCTT
CGTCCCGACCATTTCTTTCTCATCCCACGGTTTTGTTTTATCGCTGTGTC
GTCGCTTTTCGTGAAGTCGAGAGAGAGCACACTTTCAGATCGTCACAGTG
GAATGGTTTTCGAGGCCTGGAGGCGGGGTCCCTAGCAGCTCTCTTTTCTG
TTGAGCTTGTTCGTCGAATGTGCTGGTGTGTGTGAACACTGTTCGAACCC
GATCTTGCACAAGTAGATGCCGCGTGAACAGGGTTAGAGAATTGTCGACC
CCACGAAACAAAACTCGCTGGGGTTGTGCGTATGTATCGATTTTTCTCAC
GCCCGCCTTTCCCCCCATTACGCCCCGAACGCGCGCACTCACGGGGCCGC
GACGAATCATGCCATCCTCCACCGCAGGCCGGGCGATCCCAGCTGAAGCG
GAGGCGTCATCTCGCTGAAGGATCCCCTTCTCGAGATCATGGTCGAAAAG
ACGACCGTTGGGTTTACGCCACCGCATGAGCTTTCCGTCGACCGGGATGT
GAAACGCGTTTAAGCGGCACGAGCAAATCGTCGTTGGAGATGTGATTTAC
CCACGGTGTGAGCAGCTCGTCTATGGAGACGTGGTTTGCTAGCGGGGTCA
GCAGCTCGTCGTCCGGATTTCGACTTGATTTCAAACGGGTTCCTGCCGAG
GGCTCAAATCAAATGTCTTCGTCTCCTCGTGTGTCTCTTCCGTCTGGTGC
GGGCGACGCGTTTCCGACTTGTTGGCATGGGTAGCCATTTGACGTTTATG
CTTCTGTTTTCTTCTCGCTGAAGTTTTGCGTCCTGACGTTGTGTCGAAAG
ATACGGGTTTCAGGTCCCTTCGGGTCCGACTCCGAAGAGCTTGTCATTTT
GACCCAGACGGCTGGGATTTTCCGGCCTCTCATAAGAGTTGAGCGCACAA
GTCGTCGAGGATGGGGTTCAGGCGAAAACAAACGTGACGTCTCCTCTCCT
TCGTCACCCTGTTTGCTTATGTCGCACGCGAGACCGACTTTCCCGCCGCG
AAGCTGATAGGGAGCGAGGTTCGCATGCTCCGTGTTTTGCCTTTGCATCG
GGGGCGGTGGGACTACACGGCGGCATTTCAACTTTGCTTTAGACAAGCGC
TTAAGGCGACGACAGGAGGGAGATGGTAAGGTTTCCGCGAAATGTGACCA
CACCCTTCTCCTACGTCGGGTGTACGACCTTCGCGGGCGAGAACGAGACC
CCCCGTCCCGAAGCCGGACATTTCCTTTTTGGTTGTTTGGTGTCGACGGC
ATAAATTTCTCGTGTCCAGGCACACGAACGTTTTTGAGCTTTTGGCCCAG
CTCGTCGGATCTCTTTTAACCTTGTGTGTGTCCTGCCTGGATTGGCGCGC
GTGTAGTTATTGACGTGTATCACTGCACGATTGATACGCAGTGGGCGAGC
TGCGCACGTTCCGGAAGAACTTGTCAAGCCTCTAGATCGGCGAAGTCATT
TATGTTTGAAGGGGGGAGGTGACGCGGCTGCACAACTCCGCTTGCCCACG
ATTTTCTGTCCTCTGCATGTAAGTCCAATCAACCTTTTCCCGCAGTTTTT
TGTATTTTTGCGACGGCCACTCTCGCTGTAACATTCGCCGTTGGTGATAA
TCGTGCAGTTCATTACCGGCCAATGCCGAGGTTTGAGATTGAATTCCCCC
CCCCCTCCCTTTTATGCTCCGTCCTCTCGAGGACGCGTGGTCAATGGTCT
AACAACTACGGCATGCGAAACATGAGTAGCCCCCCCCCTCCCTTTTAGGA
TGCTCCAAGCGCACAAGTAATGCAGCCGTCAGGGCAGAATTGGGGATCCA
ATCCCTACGGTCGGGAAGAGACGCGAGGAGGCTGGCATGGCAGTATCGCA
TGTGCGGGATGGGAGAGGAGAGGTTGCCGTTTTTTGTATGGGAGGCGAAG
TGGGCAAACAAAGAGAGGGGTAGAAAACCCACGGAATGGGTCAAGGTTGT
AGAGGACGTATGGAAGGGGCTCGACATCGACGAAGATGAAACGCTAGAAA
CGGAGGGTCTAATGGGGTTCAAGGAGACGATATCTGTTGCATGTGCACAG
CGACAGCAGAATCTAAATAACGAAGCCAAGGATAAGGGTCTAAAAGTGTG
CGGAATGTTGAATGAAGAAATAGGGTTCAAGGATTACCTACATGGACCAA
TGGATTCAGGAACAAAGCTTAATGTTTAATTCAGGACCGGAGACATAGCC
TTCGAGAACGTAGACGAAGACATCGGACGGTAGACGACGAAGACGGCGAG
TTCAAATGTGATTGCGGCTTCGAATGCGAAAACCGTGTTCATGTAGTCGC
GGAATGTCCGTGGTGCAAGGAGAGGGAAGTGTCCGTGACTGAGCTGGGAA
AAATAGATGGGATGTACAGGGAGATGTTTGAGGCATGGAATAGAGAGGAA
AGGGCGGTAGCTGTACTGGGGCACAGGAGTTGGGTTGAAAGGCGGGAAGG
GATATCATGAGGATAGACAGACTAGGGAGGACATTTTTGAGCCACCTGTC
TGGCAAAGTAGGAAGGAAAGATTGGCCATCGGCGATCGGTCCTGTGGGAA
CAATGCTCCGTCCTCTCGAGGACGCGTGGTCAATGGTCTAACCGCTAAGG
CATGCAAAACATAAGAGTACGCCCCCCCCTCCCTTCTGTCCGATTGTGTC
CGCCCTCATGTAGTGAAGACGTGGCTTTCCCATATCGATTGGTGCAAAGC
TGTTGTTGTCGTGAGTCGGGGTGTAGAGTACGTTTTGCCTTCGGCGTTTC
GTGCAACCGAGTTGCTGTCAATTTGATCCCGACGGGTAAGAGATGAGCGT
CCAAGTCGTCGGGGATGGATCTGTGTTCAGGGGGAAGCAAACGTGACCAG
CCCTCGCCTTCGTCGCCTTGTTCGCTAATGTCGTCTGCGAGATCCAACAT
TTCCCGCAGCGAAGCTGAGCGGGGGCGTTTCGCTACTTCGTGTTTTGCGA
TGATGATAATCCCTACTGATCTCATGGAGAGCAGTAGTACCCGTACATGC
AAATACGTCCTGCACTCCTTCCGGGACAAAATGCCCTCCCTACATAATTC
CAAGATGTCGCCTTCCTCGGCGTGCCTCGACGTTCAATACATTTGGG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig8:219999..225095+

>mRNA_P-fluviatile_contig8.14306.1 ID=mRNA_P-fluviatile_contig8.14306.1|Name=mRNA_P-fluviatile_contig8.14306.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=660bp|location=Sequence derived from alignment at P-fluviatile_contig8:219999..225095+ (Porterinema fluviatile SAG_2381)
ATGTGCGGGATGGGAGAGGAGAGGTTGCCGTTTTTTGTATGGGAGGCGAA
GTGGGCAAACAAAGAGAGGGGTAGAAAACCCACGGAATGGGTCAAGGTTG
TAGAGGACGTATGGAAGGGGCTCGACATCGACGAAGATGAAACGCTAGAA
ACGGAGGGTCTAATGGGGTTCAAGGAGACGATATCTGTTGCATGTGCACA
GCGACAGCAGAATCTAAATAACGAAGCCAAGGATAAGGGTCTAAAAGTGT
GCGGAATGTTGAATGAAGAAATAGGGTTCAAGGATTACCTACATGGACCA
ATGGATTCAGGAACAAAGCTTAATGTTTAAATGTGCGGGATGGGAGAGGA
GAGGTTGCCGTTTTTTGTATGGGAGGCGAAGTGGGCAAACAAAGAGAGGG
GTAGAAAACCCACGGAATGGGTCAAGGTTGTAGAGGACGTATGGAAGGGG
CTCGACATCGACGAAGATGAAACGCTAGAAACGGAGGGTCTAATGGGGTT
CAAGGAGACGATATCTGTTGCATGTGCACAGCGACAGCAGAATCTAAATA
ACGAAGCCAAGGATAAGGGTCTAAAAGTGTGCGGAATGTTGAATGAAGAA
ATAGGGTTCAAGGATTACCTACATGGACCAATGGATTCAGGAACAAAGCT
TAATGTTTAA
back to top