mRNA_P-fluviatile_contig8.14299.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14299.1
Unique NamemRNA_P-fluviatile_contig8.14299.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: D7G0J4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J4_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 8.640e-65
Identity = 130/217 (59.91%), Postives = 150/217 (69.12%), Query Frame = 2
Query:  269 SASGVPRATSPTPEKQLATPRKSIDRHRTKSYENWPASLLREACRLPKIGGQSKCKDPRKMARVLEDLDRLKERSSPFLLDLDDKATGGTPASQPPASAKECETIPESLIKAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVAQNLGEWFGHRTQLSKAELDKKLSRKTRPAMLNVWDKFKD 919
            +++G P + +  P   L T +KSID +RTK Y  WPASLLREAC L KI G  + KD  KMA  LE LD + ER+SPFL DLDDK  GGTPASQP ASAKE E IPE L+ A  AA+ +G SF   KLL   G+SYP  AVLA I   K  E  GGD  IG RRKSKHC+PRFCE VA NL  WFGHR QLSKAELD KL+ KTR AM+ +W++FKD
Sbjct:   89 ASAGAPVSATTLPA--LLTLQKSIDHNRTKCYHKWPASLLREACSLRKIMGFCREKDSGKMANRLEQLDVVMERNSPFLADLDDKVAGGTPASQPLASAKETEEIPEELMIATKAAVGMGASFKKRKLLAYNGRSYPAAAVLAAIEAAKDGE--GGDEDIGARRKSKHCVPRFCEVVAMNLELWFGHRRQLSKAELDNKLTSKTRSAMVRLWEQFKD 301          
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: A0A6H5K1S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S9_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 1.810e-47
Identity = 159/455 (34.95%), Postives = 209/455 (45.93%), Query Frame = 2
Query:  335 SIDRHRTKSYENWPASLLREACRLPKIGGQSKCKDPRKMARVLEDLDRLKERSSPFLLDLDDKATGGTPASQPPASAKECETIPESLIKAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVAQ-NLGEWFG-HRTQLSKAELDKKLSRKTRPAMLNVWDKFKDATHRTTSAWWPLISTPTSSTSRTSRSTSSGDEERPHQGPRRHSRQLQEIWKPRRDVLLLQGQPGHALLRPDVRKVPWYRAGDHVHATRRHRKREHGGWGGHQGAERC*GSRGRR-------RQKESGQGGLQXXXXXPXXXXXXXXEAGEGNR*RGEGGREIGEEGTGSWRGGLGV-AAGRVIQHPVRRRPQNSFFATIEGLETTAKKFEVQAKLRQELKDIKASIREEKALGEEADPEDLEILERQLKDVRAALNNE 1669
            S++R+R KSY  W A LLREAC L ++ G S+ KD  KMA  L  LD +  RSSP+L DL+DKATGGTP S+PPAS+ E + +P++LI AV AA+  G S +  K+    GKSY V A++A I+E  RA+ G G+G IG RRKSKHC+PRFCE +      E FG  R QLSK ELD K    TR   L +W+ FKD   + ++                                     ++    K R D              PD+  V      D    T R          GH GA+       +R       R++  G  G Q              +                     + +G LG+ A       P       SF+ T EGLE    K E  AKLR+EL++IK  IR+EK LG +AD EDL++L      VRA +  E
Sbjct:  152 SLNRNRNKSYNKWSAYLLREACALRRLSGYSRSKDTDKMAAGLTQLDIVMSRSSPYLADLEDKATGGTPPSKPPASSAEAQRVPQNLITAVRAAIRSGLSPEPNKMYDCDGKSYTVAAIMAAIKEEDRAD-GRGEG-IGQRRKSKHCVPRFCELLMHPQFRERFGASRLQLSKKELDAKQKGTTRDIHLEIWEAFKDEKFKVSNG------------------------------------EMFSFCKERLDTYYFWLTAEKC---PDILAVCDQMLPD---GTARESTGVETAGDGHSGAQGASADASKRKVAKVESRERNVGVSGHQEKKKKQDAQIENTAKVA-----------------MSAVKGELGLDALFGTSSAPTYADAPTSFYDTKEGLENKTAKLEYIAKLRKELQEIKEDIRKEKELGSDADEEDLQLLRDWATTVRAQIRKE 545          
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: A0A6H5K787_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K787_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 6.840e-44
Identity = 166/485 (34.23%), Postives = 219/485 (45.15%), Query Frame = 2
Query:  335 SIDRHRTKSYENWPASLLREACRLPKIGGQSKCKDPRKMARVLEDLDRLKERSSPFLLDLDDKATGGTPASQPPASAKECETIPESLIKAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVAQ-NLGEWFG-HRTQLSKAELDKKLSRKTRPAMLNVWDKFKDATHRTTSAW-----------------WPLISTPTSSTSRTS-------------RSTSSGDEERPHQGPRRHSRQLQEIWKPRRDVLLLQGQPGHALLRPDVRKVPWYRAGDHVHATRRHRKREHGGWGGHQGAERC*GSRGRR-------RQKESGQGGLQXXXXXPXXXXXXXXEAGEGNR*RGEGGREIGEEGTGSWRGGLGV-AAGRVIQHPVRRRPQNSFFATIEGLETTAKKFEVQAKLRQELKDIKASIREEKALGEEADPEDLEILERQLKDVRAALNNE 1669
            S++R+R KSY  W A LLREAC L ++ G S+ K   KMA  L  LD +  RSSP+L DL+DKAT GTP S+PPAS+ E + +P+ LI AV AA+  G S +  K+    GKSY V A++A I+E  RA+ G G+G IG RRKS+HC+PRFCE +      E FG  R QLSK ELD K    TR   L +W+ FKD   +   ++                  P IS    +T RT              +S S+GD              +    K   D     G        PD+  V      D    T R          GH GA+       +R       R++  G  G Q              +                     + +G LG+ A       P       SF+ T EGLE    K E  AKLR+EL++IK  IR+EK LG +AD EDL++L  +   VRA +  E
Sbjct:   73 SLNRNRNKSYNKWSAYLLREACALRRLSGYSRSKYTDKMAAGLTQLDIVMSRSSPYLADLEDKATSGTPPSKPPASSAEAQRVPQDLITAVRAAIRSGLSPEPNKMYDCDGKSYTVAAIMAAIKEEDRAD-GRGEG-IGQRRKSRHCVPRFCELLMHPQFRERFGASRLQLSKKELDAKQKGTTRDIHLEIWEAFKDEKFKVPRSFADDSNIFGAGINPNVVHQPDISFQKFATMRTDLFKDHGEMYSNFKKSGSNGD--------------MFSFCKESLDTYYF-GLTAEKC--PDILAVCDQMLPD---GTARESTGVETAGDGHSGAQGASADASKRKVAKVESRERNVGVSGHQKKKKKQDAQIENTAKVA-----------------MSAVKGELGLDALFGTSSAPTYADAPTSFYDTKEGLENKTAKLEYIAKLRKELQEIKEDIRKEKELGSDADEEDLQLLRDRATTVRAQIKKE 518          
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: A0A6H5JHA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA4_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 1.540e-43
Identity = 102/197 (51.78%), Postives = 129/197 (65.48%), Query Frame = 2
Query:  335 SIDRHRTKSYENWPASLLREACRLPKIGGQSKCKDPRKMARVLEDLDRLKERSSPFLLDLDDKATGGTPASQPPASAKECETIPESLIKAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVAQ-NLGEWFG-HRTQLSKAELDKKLSRKTRPAMLNVWDKFKD 919
            S++R+R KSY  W A LLREAC L ++ G S+ KD  KMA  L  LD +  RSSP+L DL+DKATGGTP S+PPAS+ E + +P++LI AV AA+  G S +  K+    GKSY V A++A I+E  RA+ G G+G  G RRKSKHC+PRFCE +      E FG  R QLSK ELD K    TR   L +W+ FKD
Sbjct:  278 SLNRNRDKSYNKWSAYLLREACALRRLSGYSRSKDTDKMAAGLTQLDIVMSRSSPYLADLEDKATGGTPPSKPPASSAEAQRVPQNLITAVRAAIRSGLSPEPNKMYDCDGKSYTVAAIMAAIKEEDRAD-GRGEGT-GQRRKSKHCVPRFCELLMHPQFRERFGASRLQLSKKELDAKQKGTTRDIHLEIWEAFKD 472          
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: A0A6H5JY80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY80_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 1.220e-42
Identity = 86/129 (66.67%), Postives = 98/129 (75.97%), Query Frame = 2
Query:  533 GTPASQPPASAKECETIPESLIKAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVAQNLGEWFGHRTQLSKAELDKKLSRKTRPAMLNVWDKFKD 919
            GTPASQPPASAKE E IPE LI A  +A+D+G SF+  KLLP  G+SYP  AVLA I E K AE G  D  IG RRKSKHC+PRFCE VA NL +WF HRTQLSKAEL  KL+ KTRPAM+ +W++FKD
Sbjct:    4 GTPASQPPASAKESEKIPEELILATKSAVDMGASFEKRKLLPCNGRSYPAAAVLAAIEELKNAEGGVED--IGARRKSKHCVPRFCEMVAMNLDKWFRHRTQLSKAELHNKLTGKTRPAMVELWEEFKD 130          
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: A0A6H5JRL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL7_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 1.260e-41
Identity = 98/193 (50.78%), Postives = 124/193 (64.25%), Query Frame = 2
Query:  347 HRTKSYENWPASLLREACRLPKIGGQSKCKDPRKMARVLEDLDRLKERSSPFLLDLDDKATGGTPASQPPASAKECETIPESLIKAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVAQ-NLGEWFG-HRTQLSKAELDKKLSRKTRPAMLNVWDKFKD 919
            +R KSY  W A LLREAC L ++ G S+ KD  K+A  L  LD +  RSSP+L DL+DKATGGTP S+PP S+ E + +P++LI AV AA+  G S +  K+    GKSY V  ++A I+E  RA+ G G+G IG RRKSKHC+PRFCE +      E FG  R QLSK ELD K    TR   L +W+ FKD
Sbjct:   60 NRNKSYNKWSAYLLREACALRRLSGYSRSKDTDKIAAGLTQLDIVMSRSSPYLADLEDKATGGTPRSKPPESSAEAQRVPQNLITAVRAAIWSGLSPEPNKMYDCDGKSYAVATIMAAIKEDDRAD-GRGEG-IGQRRKSKHCVPRFCELLMHPQFRERFGASRLQLSKKELDAKQKGTTRDIHLEIWEAFKD 250          
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: A0A6H5J889_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J889_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 3.970e-38
Identity = 89/197 (45.18%), Postives = 118/197 (59.90%), Query Frame = 2
Query:  335 SIDRHRTKSYENWPASLLREACRLPKIGGQSKCKDPRKMARVLEDLDRLKERSSPFLLDLDDKATGGTPASQPPASAKECETIPESLIKAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVA--QNLGEWFGHRTQLSKAELDKKLSRKTRPAMLNVWDKFKD 919
            S+ RHR +SY+ W A LL+EAC L KI G S+  D   MA+ L  LD + ER SP+  DL+D+ATGGT  S+PPASA E + +P+ LI A+ AA++ G S    K+   G KSY   A++  ++E  R         IG RRKSKHC+PRFCE +   Q    +   RTQLS+ ELD K +   R   L +W+ FKD
Sbjct:  194 SLKRHRGRSYDQWAAYLLKEACGLRKISGYSRSSDTTAMAKALTQLDVVMERDSPYFDDLEDRATGGTAPSKPPASAAEAQRVPQHLIAALRAAINAGASPAPTKMYDCGDKSYTAAAIMEAMKEEDRQNGADNSSSIGQRRKSKHCVPRFCELLMHQQFRKRFCESRTQLSRRELDAKQTGTNRDIHLELWEAFKD 390          
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: A0A6H5JWT0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT0_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 8.820e-38
Identity = 89/197 (45.18%), Postives = 118/197 (59.90%), Query Frame = 2
Query:  335 SIDRHRTKSYENWPASLLREACRLPKIGGQSKCKDPRKMARVLEDLDRLKERSSPFLLDLDDKATGGTPASQPPASAKECETIPESLIKAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVA--QNLGEWFGHRTQLSKAELDKKLSRKTRPAMLNVWDKFKD 919
            S+ RHR +SY+ W A LL+EAC L KI G S+  D   MA+ L  LD + ER SP+  DL+D+ATGGT  S+PPASA E + +P+ LI A+ AA++ G S    K+   G KSY   A++  ++E  R         IG RRKSKHC+PRFCE +   Q    +   RTQLS+ ELD K +   R   L +W+ FKD
Sbjct:  554 SLKRHRGRSYDQWAAYLLKEACGLRKISGYSRSSDTTAMAKALTQLDVVMERDSPYFDDLEDRATGGTAPSKPPASAAEAQRVPQHLIAALRAAINAGASPAPTKMYDCGDKSYTAAAIMEAMKEEDRQNGADNSSSIGQRRKSKHCVPRFCELLMHQQFRKRFCESRTQLSRRELDAKQTGTNRDIHLELWEAFKD 750          
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: A0A6H5KSD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSD9_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 1.450e-35
Identity = 142/360 (39.44%), Postives = 171/360 (47.50%), Query Frame = 2
Query:  623 LGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVAQNLGEWFG---HRTQLSKAELDKKLSR---KTRPAMLNVWDK-FKDATHRTTSAWWPLISTPTSSTSRT-SRSTSSGDEERPHQGPRRHSRQLQEIWKPRRDVLLLQGQPG--HALLRPDVRKVPWYRAGDHVHATRRHRKREHGGWGGHQGAERC*GSRGRRRQKESGQGGLQXXXXXPXXXXXXXXEAGEGNR*RGEGGREIGEEGTGSWRGGLGVAAGRVIQHPVRRRPQNSFFATIEGLETTAKKFEVQAKLRQELKDIKASIREEKALGEEADPEDLEILERQLKDVRAALNNEV 1672
            +G SF+  KLLP  G SY   AVLA I E K AE G  D  IG RRKSKHC+PRFCE VA NL +W     H   L   +  + +     +      ++ D     +  +TT   WP +ST TS TSRT  + T+  DE     G    S   QEI  PRRDVLLLQG     H L+     K P                   G                       G+ GL      P        E GEG+R   EG R      TGSW GGLGVAAG   Q  V   P  SF+ TIEG ET  KK E  A+LRQ L DIK  +R+EKALG+  D ED++I+E +LK VRAAL  ++
Sbjct:    1 MGASFEKRKLLPCNGGSYLAAAVLAAIEELKNAEGGVED--IGARRKSKHCVPRFCELVAMNLDKWXDPPRHGRALGTVQGPQSVGEIHGQGNERSAHLEDACLCPSPSQTTIVCWPPVSTRTSCTSRTFDKFTTMKDEIIKDPGDMYVS--FQEIRTPRRDVLLLQGLDTYYHGLM---CEKYPGIEQTSIQVLPEGTESENTGVXXXXXXXXXXXXXXXXXXXXGRGKEGLDGEERHPWRAREEKKE-GEGDRXXXEGRRLSSNGETGSW-GGLGVAAGYAFQPQVFDAP-TSFYDTIEGCETRNKKLEYSARLRQTLADIKEDVRKEKALGDAVDLEDIQIMEAELKKVRAALKKDL 350          
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Match: A0A6H5K5L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5L8_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 2.120e-35
Identity = 92/195 (47.18%), Postives = 115/195 (58.97%), Query Frame = 2
Query:  335 SIDRHRTKSYENWPASLLREACRLPKIGGQSKCKDPRKMARVLEDLDRLKERSSPFLLDLDDKATGGTPASQPPASAKECETIPESLIKAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVIGGRRKSKHCIPRFCERVAQNLGEWFGHRTQLSKAELDKKLSRKTRPAMLNVWDKFKD 919
            S++R+R KSY  W A LLREAC L  + G S+  D  KMA  L  LD +  RSSP+L DL+DKATGGTP S+PPAS+ E + +P+ LI AV AA+  G S +  K+    GKSY V A++A I+E  RA+ G G+G IG RRKSKHC                     LSK ELD K    TR   L +W+ FKD
Sbjct:   62 SLNRNRNKSYNKWSAYLLREACALRTLTGNSRSNDTDKMAAGLTQLD-IMSRSSPYLADLEDKATGGTPPSKPPASSAEAQRVPQDLITAVRAAIRSGLSPEPNKMYDCDGKSYTVAAIMAAIKEEDRAD-GRGEG-IGQRRKSKHC---------------------LSKKELDAKQKGTTRDIHLEIWEAFKD 232          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0J4_ECTSI8.640e-6559.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K1S9_9PHAE1.810e-4734.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K787_9PHAE6.840e-4434.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHA4_9PHAE1.540e-4351.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY80_9PHAE1.220e-4266.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRL7_9PHAE1.260e-4150.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J889_9PHAE3.970e-3845.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWT0_9PHAE8.820e-3845.18Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSD9_9PHAE1.450e-3539.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5L8_9PHAE2.120e-3547.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:143591..147704 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size2333
Cds size795
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14299.1prot_P-fluviatile_contig8.14299.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 144681..147256 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817219.5511637-UTR-P-fluviatile_contig8:143590..1446801622817219.5511637-UTR-P-fluviatile_contig8:143590..144680Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 143591..144680 -
1693571544.6761265-UTR-P-fluviatile_contig8:143590..1446801693571544.6761265-UTR-P-fluviatile_contig8:143590..144680Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 143591..144680 -
1622817219.6058943-UTR-P-fluviatile_contig8:147256..1477041622817219.6058943-UTR-P-fluviatile_contig8:147256..147704Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 147257..147704 -
1693571545.0069997-UTR-P-fluviatile_contig8:147256..1477041693571545.0069997-UTR-P-fluviatile_contig8:147256..147704Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 147257..147704 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817219.5621352-CDS-P-fluviatile_contig8:144680..1448221622817219.5621352-CDS-P-fluviatile_contig8:144680..144822Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 144681..144822 -
1693571544.6991224-CDS-P-fluviatile_contig8:144680..1448221693571544.6991224-CDS-P-fluviatile_contig8:144680..144822Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 144681..144822 -
1622817219.5738857-CDS-P-fluviatile_contig8:145470..1456401622817219.5738857-CDS-P-fluviatile_contig8:145470..145640Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 145471..145640 -
1693571544.9704943-CDS-P-fluviatile_contig8:145470..1456401693571544.9704943-CDS-P-fluviatile_contig8:145470..145640Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 145471..145640 -
1622817219.584296-CDS-P-fluviatile_contig8:145982..1463831622817219.584296-CDS-P-fluviatile_contig8:145982..146383Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 145983..146383 -
1693571544.9826539-CDS-P-fluviatile_contig8:145982..1463831693571544.9826539-CDS-P-fluviatile_contig8:145982..146383Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 145983..146383 -
1622817219.5943248-CDS-P-fluviatile_contig8:147174..1472561622817219.5943248-CDS-P-fluviatile_contig8:147174..147256Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 147175..147256 -
1693571544.9919817-CDS-P-fluviatile_contig8:147174..1472561693571544.9919817-CDS-P-fluviatile_contig8:147174..147256Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 147175..147256 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14299.1

>prot_P-fluviatile_contig8.14299.1 ID=prot_P-fluviatile_contig8.14299.1|Name=mRNA_P-fluviatile_contig8.14299.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=265bp
MARVLEDLDRLKERSSPFLLDLDDKATGGTPASQPPASAKECETIPESLI
KAVSAALDLGTSFDMGKLLPSGGKSYPVEAVLAVIRERKRAEAGGGDGVI
GGRRKSKHCIPRFCERVAQNLGEWFGHRTQLSKAELDKKLSRKTRPAMLN
VWDKFKDATHRTTSAWWPLISTPTSSTSRTSRSTSSGDEERPHQGPRRHS
RQLQEIWKPRRDVLLLQGQPGHALLRPDVRKVPWYRAGDHVHATRRHRKR
EHGGWGGHQGAERC*
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mRNA from alignment at P-fluviatile_contig8:143591..147704-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14299.1 ID=mRNA_P-fluviatile_contig8.14299.1|Name=mRNA_P-fluviatile_contig8.14299.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4114bp|location=Sequence derived from alignment at P-fluviatile_contig8:143591..147704- (Porterinema fluviatile SAG_2381)
AAAAGGGAAGGCACCAGCCCGTGCTGCTGTGGACCCGCAGCAAGTGTCGG CCATCTTAGTAGACCCTCGTTTTGCGGTCGCCGACGCCTGCGCCGCTCTC TCCGACGACAGCGAGACCGGCGGCTCAGACATTGCGGTTGAGAACGGTGG CGACGACTCCAAGGACGTCAGCGACTCGAACGAGGACGCCACGGACGAGG ATGGCACACTGGAGCAGCGCTCGGCCGGGGCACAGGGCAGGGGATCTGAT GGCAGGAGCTCACAGGCAAGTGCCAGCGGCGTCCCACGGGCAACGTCGCC GACGCCAGAGAAGCAGCTGGCAACGCCGAGGAAGTCTATCGACCGCCACC GCACCAAAAGCTACGAGAATTGGCCGGCCAGCCTTCTGAGAGAGGCTTGC CGCTTGCCGAAAATAGGAGGCCAATCCAAGTGCAAAGACCCGCGGAAGAT GGCTCGCGTGTTGGAGGATCTCGACCGCTTGAAGGAAAGGAGCAGCCCGT TCCTGCTGGATCTCGATGACAAGGCCACAGGTGATTGAATGGCCAGGAAC ATGTTGGGCTGCCCTAGCGTCGCTTCACTCCCCTTACTGTTGTTCAGCTC GCATTGCCCATCAGGGTGGTTGTTATGTAGAATGTGTACCGTCCAACCAC AGCAGTAGTAGCTCCCATTTGAATCCAATGACGTCCTTCGTTCGTAGCGG TGGATCTGTTTGAGGCACCGACGTGGAAGAGGTGATCCTGAAGAGTTGCC AGAAACTGAAGCCCGAAACATGTTTCGTGTTGAGTGATACCATTATGTGT AAGAGAGATCACACACACGCATGCACGCACGCACGCACACACACATTCGC GCAGCAGCGGCAGCAGCAGCGAGAGCATCGTCCGGGCGCTCCGTGCCCCG CGTTTCGCAATTTGATTTCGGGGGCGCTTTCGAGTCATATTTTTGCACCC CGGCGGGAAGTGTTGGGAGTTGCCCCAAGAACTGTCAGTCGAGGCATCGT GAGGTATTCATTCAGTATGATCGTCGTGCAGCTGCCGCATCTCCGGCCGT GGGGTCACAACATCAACACGCAAGCAGCCTGTCGCCCTGTGCGAGGGCGA TAGGCGGGCAGCAGGACGAAACAACAGCCCCATGCAAACGCAACACGTAT ATCAAAATGCTCCTGTTTCGTTTTCAGGCGGAAGACCCCACAGCACATGT CGTTTTGGTTTGCATGCAGAAGCATCATGATGGAAGGGCTTGAATTGAAC ATTTCGACGACGGCATTCATTCGTTCCGGCCCAACCGGCGCCCCCGCCCT CGCTGCCCCTTACATGGACAGGCGGAACGCCGGCTTCCCAGCCACCAGCT TCAGCGAAGGAGTGCGAGACGATTCCTGAATCACTCATCAAGGCGGTGAG CGCTGCGCTGGACCTTGGGACGAGCTTCGACATGGGGAAGCTGCTGCCCT CCGGGGGCAAGTCGTACCCGGTGGAAGCCGTCTTGGCTGTGATAAGGGAA CGCAAACGCGCTGAAGCGGGAGGGGGCGACGGGGTCATCGGAGGGCGTCG AAAGAGCAAACACTGTATCCCTCGGTTTTGTGAGCGCGTGGCACAAAATC TCGGCGAGTGGTTTGGGCACCGGACGCAGCTAAGCAAGGCAGAGCTGGAC AAAAAGCTGAGCCGCAAAACCCGCCCCGCCATGCTGAACGTGTGGGACAA GTTCAAGGACGCAACTCATCGGGTGAGACTTCGTTGATGTCGAAATATAA GGTGATTCACCGGTAGTTACCTCAGCGGTTAGATTTTGTATTTGATGCCT GTCACGTTCACGACGGCGGCGGTGCAAATGGGCCAAGGTGGCAGAAGTTG CTATGTTTCGTTTGTCTTCTTCGTGCTATATGTGCTCTGCATAGTAACAA GCGGTCAGCACAACAAGTAAAGCACGGACGGCTACGAGCAGGAAAATTAG GGCAGACAATTATTCAACTGTCTTGTTTCGACGTAGAGGGTTTCGTTCCG AAGGGAAAGGAAAAGCACACCCTCTTTATTCTTTGCATAATTCGTGTGCA TTTCACCTTCGCAGACGACGAGCGCGTGGTGGCCGCTAATATCGACGCCA ACATCGTCCACCAGCCGAACATCACGTTCGACAAGTTCAGGGGATGAAGA ACGACCTCATCAAGGACCACGGCGACATAGTCGCCAACTACAAGAAATCT GGAAGCCACGTCGAGATGTTCTCCTTCTGCAAGGGTTAGTGGAATTCCTG CTTTTCCTAATTTGGTGGCAAGGTCGAAGGGGAACCCCCCCCTCCTTCTC TGGTTGTGCGGCATAGTACGAATACGTTGCGGCGGCCTGGAAATAAATGT ATAGCATTCGAGATTAAATTTGTCTGAAAACTAGGAGTTGGGTGCCTTCG CATCAGCGGTAGCTTTTCGTTTGTGGACGCACCGTCCAAACCAATCCCTT CAACGCACAAACTCGCATCCAGCACAAGAATTGTCTGCGGAGGGGGATCA CTTCGAACGGGGTGGGGTGGAGTACTGTCTCCAGTTTGGGACTAACGCTG TGAGAAAGCTAGATGCAAAACACATGAACTCCGCCACGCCCAACCCAACT TGAACGTGTCGGTGCAGTGCTGTTCAACCGAGTGGTGGTATCTTGTCCCC GTGCGAGAGCTTGGATCGTGTTTAGCATTATCCTCCTAGAGCGAGTCCTA GAGCGAGTTCGTGAAAACGGACAAGAGAATATCGACGTCGGAGAACCTCG TTTGTATGTAGTTGGAAGTGTCGAAAAACGTCATGCTTAAACGACGGTGC CACCTCACCTGACCCCCGTCGCCCCTCCCCCTCGTCGCCTCCCGACTACG GCGCGCGCTGACCGCAAAACGCGATAATTCAGACAACCTGGACACGCACT ACTACGTCCCGATGTGCGAAAAGTACCCTGGTATCGAGCAGGCGACCACG TGCATGCTACCCGACGGCACAGGAAGCGAGAGCACGGGGGTTGGGGGGGG CATCAAGGGGCCGAGCGGTGCTGAGGGAGCCGCGGCCGACGCCGGCAGAA GGAAAGCGGCCAAGGAGGACTCCAGGAAGAGGAACGCCGCCCTCGGCGGG CAAGACAAGAAGAAGAGGAAGCAGGGGAAGGAAATCGATAACGTGGCGAA GGTGGCCGCGAAATCGGCGAAGAAGGAACTGGGTCTTGGCGAGGGGGGCT TGGGGTCGCTGCTGGGCGTGTCATCCAGCACCCAGTACGCCGACGCCCCC AAAATTCCTTCTTCGCCACGATTGAGGGGTTGGAGACGACGGCAAAGAAA TTCGAAGTCCAGGCGAAGCTCCGCCAAGAGCTCAAGGACATTAAGGCGAG CATCAGGGAGGAGAAGGCTCTGGGCGAAGAGGCTGACCCGGAGGACTTGG AGATTTTGGAACGACAACTGAAAGATGTGAGGGCCGCCCTGAATAATGAA GTGTAACTGCGAGAAGCCCTTTGAATTTGGCGCGATGGTAGTGGTGTTGC GGCTGCGACGGCAGGGGAGGCGGGCGCATTGGGGAGAGCAGGGGTGGCGA GTGGTAGCAGGGGTAAGAGAGACTGCGCGTGATTGTTGTGCACCCCTGGG CCTCTCCACGTCGGAATCTCGCTGGTCGGGTGGTGATATGTGTATGTTGG AGTGATGGGTTGTGCACATGCCCTTGGCGCGAAGGAGCCGTGGAGGAGAA AGTGCAGTAGCTGTGGGACTTCCTTTGTGGTGTGTTCGGGGTCAGCGACC ATGTTTCTTGGCTTGTTTCTTACTTTTGCTGTACCGGGTGCACGGCCGGC CGGGCGAGGTGTACCCCGAAGTGACGGTGTGGTAGTGGTGTCCTTATTTT TTCTGCCTTGCCTAGTTGCTCAGATTGCTGTACCCGAAGTGTCGGGGGTG ATATTTCGCCATATTGCTTGTCCACTTCACCGATGGGTTGTTGTCTAGTC GCGGAAAGAACGCATTGCTCACACGCCTTCCCCAATCTTTTTGTATTTTA GAAAGTTGTACTTGTACAAGTGTCTGTGTTTTTCTTGTTTTGCTTTTTTC TTCATTTGTGTATTTTAGAAAGGTTTTGTACGAGTACCTGTCTGTACTTT TCTTGTTTTGCTTT
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:143591..147704-

>mRNA_P-fluviatile_contig8.14299.1 ID=mRNA_P-fluviatile_contig8.14299.1|Name=mRNA_P-fluviatile_contig8.14299.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1590bp|location=Sequence derived from alignment at P-fluviatile_contig8:143591..147704- (Porterinema fluviatile SAG_2381)
ATGGCTCGCGTGTTGGAGGATCTCGACCGCTTGAAGGAAAGGAGCAGCCC
GTTCCTGCTGGATCTCGATGACAAGGCCACAGATGGCTCGCGTGTTGGAG
GATCTCGACCGCTTGAAGGAAAGGAGCAGCCCGTTCCTGCTGGATCTCGA
TGACAAGGCCACAGGCGGAACGCCGGCTTCCCAGCCACCAGCTTCAGCGA
AGGAGTGCGAGACGATTCCTGAATCACTCATCAAGGCGGTGAGCGCTGCG
CTGGACCTTGGGACGAGCTTCGACATGGGGAAGCTGCTGCCCTCCGGGGG
CAAGTCGTACCCGGTGGAAGCCGTCTTGGCTGTGATAAGGGAACGCAAAC
GCGCTGAAGCGGGAGGGGGCGACGGGGTCATCGGAGGGCGTCGAAAGAGC
AAACACTGTATCCCTCGGTTTTGTGAGCGCGTGGCACAAAATCTCGGCGA
GTGGTTTGGGCACCGGACGCAGCTAAGCAAGGCAGAGCTGGACAAAAAGC
TGAGCCGCAAAACCCGCCCCGCCATGCTGAACGTGTGGGACAAGTTCAAG
GACGCAACTCATCGGGCGGAACGCCGGCTTCCCAGCCACCAGCTTCAGCG
AAGGAGTGCGAGACGATTCCTGAATCACTCATCAAGGCGGTGAGCGCTGC
GCTGGACCTTGGGACGAGCTTCGACATGGGGAAGCTGCTGCCCTCCGGGG
GCAAGTCGTACCCGGTGGAAGCCGTCTTGGCTGTGATAAGGGAACGCAAA
CGCGCTGAAGCGGGAGGGGGCGACGGGGTCATCGGAGGGCGTCGAAAGAG
CAAACACTGTATCCCTCGGTTTTGTGAGCGCGTGGCACAAAATCTCGGCG
AGTGGTTTGGGCACCGGACGCAGCTAAGCAAGGCAGAGCTGGACAAAAAG
CTGAGCCGCAAAACCCGCCCCGCCATGCTGAACGTGTGGGACAAGTTCAA
GGACGCAACTCATCGGACGACGAGCGCGTGGTGGCCGCTAATATCGACGC
CAACATCGTCCACCAGCCGAACATCACGTTCGACAAGTTCAGGGGATGAA
GAACGACCTCATCAAGGACCACGGCGACATAGTCGCCAACTACAAGAAAT
CTGGAAGCCACGTCGAGATGTTCTCCTTCTGCAAGGACGACGAGCGCGTG
GTGGCCGCTAATATCGACGCCAACATCGTCCACCAGCCGAACATCACGTT
CGACAAGTTCAGGGGATGAAGAACGACCTCATCAAGGACCACGGCGACAT
AGTCGCCAACTACAAGAAATCTGGAAGCCACGTCGAGATGTTCTCCTTCT
GCAAGGACAACCTGGACACGCACTACTACGTCCCGATGTGCGAAAAGTAC
CCTGGTATCGAGCAGGCGACCACGTGCATGCTACCCGACGGCACAGGAAG
CGAGAGCACGGGGGTTGGGGGGGGCATCAAGGGGCCGAGCGGTGCTGAAC
AACCTGGACACGCACTACTACGTCCCGATGTGCGAAAAGTACCCTGGTAT
CGAGCAGGCGACCACGTGCATGCTACCCGACGGCACAGGAAGCGAGAGCA
CGGGGGTTGGGGGGGGCATCAAGGGGCCGAGCGGTGCTGA
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