mRNA_P-fluviatile_contig79.14285.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig79.14285.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE) HSP 1 Score: 152 bits (385), Expect = 1.000e-39 Identity = 85/166 (51.20%), Postives = 108/166 (65.06%), Query Frame = 1
Query: 13 IQRLTAWARKDPLPLLVVLDDVWESDVVDALRYTGLKLLVTTRVGDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLPEAEANTVADDCGRLALALAIVGSLPSIRKSPDGAEGWRDLHLEIMEKKRQRRGLRMATESNQDKSKSALFPVLGLSMDQLGEDAQNL 510
IQ LT +D LP LVVLDDVWE VVD LR TGL+LLVTTR+ VVA GG T +G+M EAR+LL+ +SGA+ LP+ EA+ VA CG AL LAI GSL ++ P+ A WR L E+ + K RG +M + D +K +LFPVL LS++ LG D + L
Sbjct: 328 IQYLTVLVAEDKLPRLVVLDDVWERAVVDTLRPTGLRLLVTTRLDSVVAMRGGRTTVGNMDGGEARELLKSRSGAIALPKTEADQVAAACGWHALTLAIAGSLRFVKDDPNSASTWRRLASEMTQTKNSVRGPKMDADIGDDPTKKSLFPVLELSLESLGGDRERL 493
BLAST of mRNA_P-fluviatile_contig79.14285.1 vs. uniprot
Match: A0A6H5JSG2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG2_9PHAE) HSP 1 Score: 151 bits (381), Expect = 3.150e-39 Identity = 85/160 (53.12%), Postives = 111/160 (69.38%), Query Frame = 1
Query: 28 AWARKDPLPLLVVLDDVWESDVVDALRYTGLKLLVTTRVGDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLPEAEANTVADDCGRLALALAIVGSLPSIRKSPDGAEGWRDLHLEIMEKKRQRRGLRMATESNQDKSKSALFPVLGLSMDQLGEDAQN 507
A AR + +P L++LDDVW +VV+ALR TGL+++VTTR+ V G +GDM EAR+LLRK+SGAV LP EAN VA DCG L LAI GSL +R++PD A WR+LH EI KR RRGL+M T+S+++ S+S LFPVL LS ++L Q+
Sbjct: 313 AVARDNSVPRLLILDDVWHEEVVNALRPTGLQIVVTTRLASV----GRGMIVGDMEDGEARELLRKKSGAVALPAPEANQVARDCGCHPLTLAIAGSLRCVREAPDSALAWRELHSEIGRIKRSRRGLQMTTDSDEEPSQSPLFPVLRLSFERLRVQEQD 468
BLAST of mRNA_P-fluviatile_contig79.14285.1 vs. uniprot
Match: D7G7W8_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W8_ECTSI) HSP 1 Score: 150 bits (379), Expect = 6.440e-39 Identity = 85/160 (53.12%), Postives = 110/160 (68.75%), Query Frame = 1
Query: 28 AWARKDPLPLLVVLDDVWESDVVDALRYTGLKLLVTTRVGDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLPEAEANTVADDCGRLALALAIVGSLPSIRKSPDGAEGWRDLHLEIMEKKRQRRGLRMATESNQDKSKSALFPVLGLSMDQLGEDAQN 507
A AR + +P L+VLDDVW +V+DALR TGL++LVTTR+ V G +GDM + EAR+LL K+SGAV LP EAN VA DCG L L I GSL +R++PD A WR+LH EI KR RGL MAT+S+++ S+S+LFPVL LS ++L Q+
Sbjct: 313 AVARDNSVPRLLVLDDVWHEEVMDALRPTGLQILVTTRLASV----GRGMLVGDMEEGEARELLSKKSGAVALPVPEANQVARDCGCHPLTLVIAGSLRCVREAPDSALAWRELHSEIERIKRSSRGLEMATDSDEEPSQSSLFPVLSLSFERLKVQEQD 468
BLAST of mRNA_P-fluviatile_contig79.14285.1 vs. uniprot
Match: A0A6H5KK53_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK53_9PHAE) HSP 1 Score: 101 bits (251), Expect = 4.150e-22 Identity = 52/86 (60.47%), Postives = 62/86 (72.09%), Query Frame = 1
Query: 13 IQRLTAWARKDPLPLLVVLDDVWESDVVDALRYTGLKLLVTTRVGDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLPEAEANTV 270
IQ LT +D LP LVVLDDVWE VVD LR TGL+LLVTTR+ VVA GG T +G+M EAR+LL+ +SGA+ LPE EA+ V
Sbjct: 325 IQHLTVLVAEDKLPRLVVLDDVWERAVVDILRPTGLRLLVTTRLDSVVAVRGGRTVVGNMATGEARELLKSKSGAITLPETEADQV 410
BLAST of mRNA_P-fluviatile_contig79.14285.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 8.210e-21 Identity = 62/137 (45.26%), Postives = 78/137 (56.93%), Query Frame = 1
Query: 16 QRLTAWARKDPLPLLVVLDDVWESDVVDALRYTGLKLLVTTRVGDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLPEAEANT----VADDCGRLALALAIVGSLPSIRKSPDGAEGWRDL--HLEIMEKKRQRRG 408
Q L A A P LVVLDDVWE +VVDA G K+L+TTR VV G ++GDMT+ EA +LLRK SGAV P + T V CG L L LAI GS+ ++ A W++L +LE + KK + RG
Sbjct: 321 QHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARG 457
BLAST of mRNA_P-fluviatile_contig79.14285.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 1.430e-19 Identity = 62/137 (45.26%), Postives = 75/137 (54.74%), Query Frame = 1
Query: 16 QRLTAWARKDPLPLLVVLDDVWESDVVDALRYTGLKLLVTTRVGDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLPEAEANT----VADDCGRLALALAIVGSLPSIRKSPDGAEGWRDL--HLEIMEKKRQRRG 408
Q L A A P LVVLDDVWE +VVDA G K+L+TTR VV G ++GDMT+ EA +LLRK SG V P + T V CG L L LAI GS+ +R A W +L LE + KK + RG
Sbjct: 375 QHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSGTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARG 511
BLAST of mRNA_P-fluviatile_contig79.14285.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 1.650e-19 Identity = 70/169 (41.42%), Postives = 85/169 (50.30%), Query Frame = 1
Query: 16 QRLTAWARKDPLPLLVVLDDVWESDVVDALRYTGLKLLVTTRVGDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLPEAEANT----VADDCGRLALALAIVGSLPSIRKSPDGAEGWRDL--HLEIMEKKRQRRGLRMATESNQDKSKSALFPVLGLSMDQLGEDAQ 504
Q L A P LVVLDDVWE +VVDAL GLK+LVTTR VV GG ++GDMT+ EA +LL K S V P E T V CG L L LAI GS+ ++ A W +L E + KK + RG + S++ VLG S D L Q
Sbjct: 116 QHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELLLKTSRTVGQPGHEVRTQMTKVVVLCGHLPLVLAIAGSMSVVKGKGLTAVAWEELIKEFENVAKKMRVRG----------EQSSSIKVVLGTSFDALAARKQ 274
BLAST of mRNA_P-fluviatile_contig79.14285.1 vs. uniprot
Match: A0A6H5J6Q8_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Q8_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 4.540e-19 Identity = 48/84 (57.14%), Postives = 61/84 (72.62%), Query Frame = 1
Query: 13 IQRLTAWARKDPLPLLVVLDDVWESDVVDALRYTGLKLLVTTRVGDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLPEAEAN 264
IQ LT +D LP L+VLDDV E VVD LR TGL+LLVTTR+ +VA GG T +G+M + EAR+LL+ +SGA+ LPE EA+
Sbjct: 283 IQHLTVVVAEDRLPRLMVLDDVLERAVVDTLRPTGLRLLVTTRLDSLVAVRGGRTVVGNMDRAEARELLKSKSGAIELPETEAD 366
BLAST of mRNA_P-fluviatile_contig79.14285.1 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 4.870e-19 Identity = 57/125 (45.60%), Postives = 71/125 (56.80%), Query Frame = 1
Query: 13 IQRLTAWARKDPLPLLVVLDDVWESDVVDALRYTGLKLLVTTRVGDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLP----EAEANTVADDCGRLALALAIVGSLPSIRKS--PDGAEGWRDL 369
+Q L A + P LVVLDDVWE +VV A GLK+LVTTR +V GG ++GDM + EA +LL K SG V P + V D CGRL L LAI GS+P ++ DGA W +L
Sbjct: 351 MQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGGLLELGDMAEDEALELLWKTSGTVGQPGDGVRTQMTKVVDRCGRLPLVLAIAGSMPVVKGKGLKDGA--WEEL 473
BLAST of mRNA_P-fluviatile_contig79.14285.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 4.350e-18 Identity = 60/137 (43.80%), Postives = 74/137 (54.01%), Query Frame = 1
Query: 16 QRLTAWARKDPLPLLVVLDDVWESDVVDALRYTGLKLLVTTRVGDVVAAEGGHTDIGDMTKPEARDLLRKQSGAVNLPEAEANT----VADDCGRLALALAIVGSLPSIRKSPDGAEGWRDL--HLEIMEKKRQRRG 408
Q L A LVVLDDVWE +VVDA G K+L+TTR VV G ++GD+T+ EA +LLRK SGAV P + T V CG L L LAI GS+ +R A W +L LE + KK + RG
Sbjct: 358 QHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARG 494 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig79.14285.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig79.14285.1 >prot_P-fluviatile_contig79.14285.1 ID=prot_P-fluviatile_contig79.14285.1|Name=mRNA_P-fluviatile_contig79.14285.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=170bp EDAGIQRLTAWARKDPLPLLVVLDDVWESDVVDALRYTGLKLLVTTRVGDback to top mRNA from alignment at P-fluviatile_contig79:472397..473087+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig79.14285.1 ID=mRNA_P-fluviatile_contig79.14285.1|Name=mRNA_P-fluviatile_contig79.14285.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=691bp|location=Sequence derived from alignment at P-fluviatile_contig79:472397..473087+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig79:472397..473087+ >mRNA_P-fluviatile_contig79.14285.1 ID=mRNA_P-fluviatile_contig79.14285.1|Name=mRNA_P-fluviatile_contig79.14285.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1020bp|location=Sequence derived from alignment at P-fluviatile_contig79:472397..473087+ (Porterinema fluviatile SAG_2381)back to top |