mRNA_P-fluviatile_contig78.14231.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig78.14231.1 vs. uniprot
Match: A0A6H5JMY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMY2_9PHAE) HSP 1 Score: 258 bits (660), Expect = 2.880e-72 Identity = 121/186 (65.05%), Postives = 150/186 (80.65%), Query Frame = 1
Query: 331 MAAAQDAHVRQFEDRSFHFVPRRELMKIQSGCVVTICQVLGKHNRTNAWQRKDACVVEQCIGALALHVHGRPERCRELQETKGGVQAIVTGMMECTENMIVQKRGLKLIADTCLALPSCAEAFVEVGALKTIVYGMNRFHEYWNLVASSCEAIFAIVAAVPSIKRKLLDSVLDAGVQLAVGRALRR 888
M +AQDAH RQF+D SFHFVPR+++M+IQSGC+ T+CQVL K+NRTN WQRKDACVVEQC+ L LHVH RPERCR+LQ T+GGVQAIVTGM EC+E+++VQ+RGLKL+ DTCLA+ SCAEAFVE AL+TIV + F W++ CEA+ A+VAA+PS + L+ VL+AG LA GRALRR
Sbjct: 1 MDSAQDAHARQFDDPSFHFVPRKKMMQIQSGCIDTMCQVLDKNNRTNTWQRKDACVVEQCMSTLVLHVHRRPERCRQLQATRGGVQAIVTGMRECSESVLVQERGLKLVVDTCLAVSSCAEAFVEASALETIVNTLGLFRHDWHVQLCGCEALCAVVAALPSNNQDFLERVLNAGAHLAAGRALRR 186
BLAST of mRNA_P-fluviatile_contig78.14231.1 vs. uniprot
Match: D8LTG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTG4_ECTSI) HSP 1 Score: 218 bits (555), Expect = 4.430e-62 Identity = 105/143 (73.43%), Postives = 124/143 (86.71%), Query Frame = 1
Query: 268 MACEDNDSRVQMALLSEKLHAMAAAQDAHVRQFEDRSFHFVPRRELMKIQSGCVVTICQVLGKHNRTNAWQRKDACVVEQCIGALALHVHGRPERCRELQETKGGVQAIVTGMMECTENMIVQKRGLKLIADTCLALPSCAEA 696
MA ED SRV +ALL +KL AM +AQDAH RQF D SFHFVPR+++M+IQSGC+ T+CQVL K+NRTN WQRKDACVVEQC+ ALALHVH RPERCR+LQ TKGGVQAIVTGM EC+E+++VQ+RGLKL+ D+CLAL SCAEA
Sbjct: 1 MAYEDERSRVCVALLFKKLCAMDSAQDAHARQFVDPSFHFVPRKKMMQIQSGCIDTMCQVLDKNNRTNTWQRKDACVVEQCMSALALHVHRRPERCRQLQATKGGVQAIVTGMRECSESVLVQERGLKLVVDSCLALSSCAEA 143
BLAST of mRNA_P-fluviatile_contig78.14231.1 vs. uniprot
Match: D8LTG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTG5_ECTSI) HSP 1 Score: 153 bits (387), Expect = 3.790e-39 Identity = 88/165 (53.33%), Postives = 109/165 (66.06%), Query Frame = 1
Query: 2203 VHAVTSIARRTQPLHSPSARELFPPSRAGYGVGKQSPDAAKDVTTGRQWLKGLVAEVSEALLWRGKNLERLVTILVRSMDVHEAVAPLQWICLVCLIDLQALEARGLDIFMMHSGCEVLHRCIRVNARHTAVVEQGCRAVAVLSERSFTTRTRLLGEKVQDAIHQ 2697
+H+V IARR Q P A G+ V K P+ D VSEAL RG L++ ++L + MDVH+AVAPL WICLVCLIDL ALEAR DIF++++GC+VLHRCIR+NARHTAVVEQ CR VAV+SE SFT+RTR + E +QDAIH+
Sbjct: 1 MHSVIRIARREQSPKDPPA---------GH-VTKDGPERLSD------------NRVSEAL-HRGNKLDQQASLLAQVMDVHQAVAPLLWICLVCLIDLHALEARVSDIFIINAGCQVLHRCIRINARHTAVVEQVCRVVAVMSEPSFTSRTRFMVENIQDAIHE 142 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig78.14231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig78.14231.1 >prot_P-fluviatile_contig78.14231.1 ID=prot_P-fluviatile_contig78.14231.1|Name=mRNA_P-fluviatile_contig78.14231.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=452bp MHALETIALRCCGGCGSTKDGRACVQHALRRSNRTAALRGSKNDGGVDTRback to top mRNA from alignment at P-fluviatile_contig78:363625..377138+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig78.14231.1 ID=mRNA_P-fluviatile_contig78.14231.1|Name=mRNA_P-fluviatile_contig78.14231.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=13514bp|location=Sequence derived from alignment at P-fluviatile_contig78:363625..377138+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig78:363625..377138+ >mRNA_P-fluviatile_contig78.14231.1 ID=mRNA_P-fluviatile_contig78.14231.1|Name=mRNA_P-fluviatile_contig78.14231.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2712bp|location=Sequence derived from alignment at P-fluviatile_contig78:363625..377138+ (Porterinema fluviatile SAG_2381)back to top |