mRNA_P-fluviatile_contig78.14206.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig78.14206.1
Unique NamemRNA_P-fluviatile_contig78.14206.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig78.14206.1 vs. uniprot
Match: D7FZ56_ECTSI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ56_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 2.060e-45
Identity = 71/79 (89.87%), Postives = 76/79 (96.20%), Query Frame = 1 
Query:    1 MGRDH-GMEGKATEEEMVAAKMPIAFRDSCAHLLLPLNKCRRSTMYLPWKCSHERHMYEKCQYLDFEKRKAMMKESKEG 234
            MG DH GMEGKATEEEMVAAKMP+AFRDSCAHLLLPLNKCRRSTMYLPW+CSHERH+YEKCQYLDF++RKAMMKESKE 
Sbjct:    1 MGGDHDGMEGKATEEEMVAAKMPMAFRDSCAHLLLPLNKCRRSTMYLPWQCSHERHIYEKCQYLDFKERKAMMKESKES 79
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BLAST of mRNA_P-fluviatile_contig78.14206.1 vs. uniprot
Match: G9MJU7_HYPVG (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=6 Tax=Hypocreales TaxID=5125 RepID=G9MJU7_HYPVG)

HSP 1 Score: 107 bits (268), Expect = 5.280e-29
Identity = 53/82 (64.63%), Postives = 63/82 (76.83%), Query Frame = 1 
Query:    1 MGRDHGMEGK-ATEEEMVAAKMPIAFRDSCAHLLLPLNKCRRSTMYLPWKCSHERHMYEKCQYLDFEKRKAMM---KESKEG 234
            M  D   EG+ AT EEM  A++P+A+RDSCAHLL+PLNKCRR T Y PWKCS ERH YEKCQY++F+KR A M   +ESKEG
Sbjct:    1 MASDAATEGRQATREEMRDARLPLAYRDSCAHLLIPLNKCRRETWYAPWKCSDERHSYEKCQYVEFKKRVAKMNELRESKEG 82
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BLAST of mRNA_P-fluviatile_contig78.14206.1 vs. uniprot
Match: A0A0G4N0K7_9PEZI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=2 Tax=Verticillium longisporum TaxID=100787 RepID=A0A0G4N0K7_9PEZI)

HSP 1 Score: 107 bits (267), Expect = 7.300e-29
Identity = 52/81 (64.20%), Postives = 61/81 (75.31%), Query Frame = 1 
Query:    1 MGRDHGMEGKATEEEMVAAKMPIAFRDSCAHLLLPLNKCRRSTMYLPWKCSHERHMYEKCQYLDFEKRKAMMKE---SKEG 234
            MG D+   G AT EEM  A++P+A+RDSCAHLL+PLN+CR  T YLPWKCS ERH YEKCQY +F+KR A M E   SKEG
Sbjct:    1 MGSDNAPTGPATREEMREARLPLAYRDSCAHLLIPLNRCRTETWYLPWKCSDERHGYEKCQYEEFKKRVAKMDELRASKEG 81
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BLAST of mRNA_P-fluviatile_contig78.14206.1 vs. uniprot
Match: A0A0G4MZR7_9PEZI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=7 Tax=Plectosphaerellaceae TaxID=1033978 RepID=A0A0G4MZR7_9PEZI)

HSP 1 Score: 107 bits (266), Expect = 1.040e-28
Identity = 51/81 (62.96%), Postives = 62/81 (76.54%), Query Frame = 1 
Query:    1 MGRDHGMEGKATEEEMVAAKMPIAFRDSCAHLLLPLNKCRRSTMYLPWKCSHERHMYEKCQYLDFEKRKAMMKE---SKEG 234
            MG D+  +G AT EEM  A++P+A+RDSCAHLL+PLN+CR  T YLPWKCS ERH YEKCQY +F+KR A M E   SK+G
Sbjct:    1 MGSDNAPKGPATREEMREARLPLAYRDSCAHLLIPLNRCRTETWYLPWKCSDERHGYEKCQYEEFKKRVAKMDELRASKDG 81
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BLAST of mRNA_P-fluviatile_contig78.14206.1 vs. uniprot
Match: A0A0W7VSI5_9HYPO (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=6 Tax=Trichoderma TaxID=5543 RepID=A0A0W7VSI5_9HYPO)

HSP 1 Score: 105 bits (262), Expect = 4.340e-28
Identity = 49/72 (68.06%), Postives = 59/72 (81.94%), Query Frame = 1 
Query:   28 KATEEEMVAAKMPIAFRDSCAHLLLPLNKCRRSTMYLPWKCSHERHMYEKCQYLDFEKRKAMM---KESKEG 234
            +AT EEM  AK+P+A+RDSCAHLL+PLNKCRR T Y PWKC+ ERH YEKCQY++F+KR A M   +ESKEG
Sbjct:   11 QATREEMRDAKLPLAYRDSCAHLLIPLNKCRRETWYAPWKCTDERHSYEKCQYVEFKKRVAKMNELRESKEG 82
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BLAST of mRNA_P-fluviatile_contig78.14206.1 vs. uniprot
Match: I1S5X9_GIBZE (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=10 Tax=Fusarium TaxID=5506 RepID=I1S5X9_GIBZE)

HSP 1 Score: 105 bits (261), Expect = 6.160e-28
Identity = 51/79 (64.56%), Postives = 60/79 (75.95%), Query Frame = 1 
Query:    1 MGRDHGMEGK-ATEEEMVAAKMPIAFRDSCAHLLLPLNKCRRSTMYLPWKCSHERHMYEKCQYLDFEKRKAMMKESKEG 234
            MG D   E + AT EEM  AK+P+A+RDSCAHLL+PLNKCRR T Y PWKCS ERH YEKCQY++F+KR A M E +E 
Sbjct:    1 MGSDAITEPRQATREEMRDAKLPLAYRDSCAHLLIPLNKCRRDTWYAPWKCSDERHSYEKCQYVEFKKRVAKMDELRES 79
[Close]
BLAST of mRNA_P-fluviatile_contig78.14206.1 vs. uniprot
Match: A0A420YNW9_9PEZI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Coniochaeta pulveracea TaxID=177199 RepID=A0A420YNW9_9PEZI)

HSP 1 Score: 103 bits (258), Expect = 1.820e-27
Identity = 46/69 (66.67%), Postives = 56/69 (81.16%), Query Frame = 1 
Query:   28 KATEEEMVAAKMPIAFRDSCAHLLLPLNKCRRSTMYLPWKCSHERHMYEKCQYLDFEKRKAMMKESKEG 234
            +AT EEM AAK+P+A+RDSCAHLL+PLN+CR  T YLPWKC  ERH YEKCQY++F+KR A M E +E 
Sbjct:   12 QATREEMSAAKVPLAYRDSCAHLLIPLNRCRYETYYLPWKCEDERHTYEKCQYVEFKKRVAKMDELRES 80
[Close]
BLAST of mRNA_P-fluviatile_contig78.14206.1 vs. uniprot
Match: A0A6A6UGI8_9PEZI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Microthyrium microscopicum TaxID=703497 RepID=A0A6A6UGI8_9PEZI)

HSP 1 Score: 104 bits (259), Expect = 1.910e-27
Identity = 48/77 (62.34%), Postives = 57/77 (74.03%), Query Frame = 1 
Query:    1 MGRDHGME---GKATEEEMVAAKMPIAFRDSCAHLLLPLNKCRRSTMYLPWKCSHERHMYEKCQYLDFEKRKAMMKE 222
            +G  HG E   G AT EEM AA++P+A+RDSCAHLL+PLNKCR+   YLPWKC HERH YE CQY +F+KR   M E
Sbjct:   11 VGLGHGHEDPKGPATREEMTAARLPLAYRDSCAHLLIPLNKCRQKEWYLPWKCDHERHSYEGCQYAEFKKRVKKMDE 87
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BLAST of mRNA_P-fluviatile_contig78.14206.1 vs. uniprot
Match: A0A6A6RFU9_9PEZI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Lophium mytilinum TaxID=390894 RepID=A0A6A6RFU9_9PEZI)

HSP 1 Score: 103 bits (258), Expect = 4.530e-27
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 1 
Query:    1 MGRDHGMEGKATEEEMVAAKMPIAFRDSCAHLLLPLNKCRRSTMYLPWKCSHERHMYEKCQYLDFEKRKAMMKE 222
            +G ++   G+AT EEM AAK+PI +RDSCAHLL+PLN+CR    YLPWKC +ERH YEKCQY++F+KR A M E
Sbjct:   35 VGLNNASSGQATREEMSAAKLPIQYRDSCAHLLIPLNRCRVEEYYLPWKCENERHSYEKCQYVEFKKRVAKMDE 108
[Close]
BLAST of mRNA_P-fluviatile_contig78.14206.1 vs. uniprot
Match: A0A2T4C014_TRILO (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Trichoderma longibrachiatum ATCC 18648 TaxID=983965 RepID=A0A2T4C014_TRILO)

HSP 1 Score: 104 bits (259), Expect = 5.760e-27
Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 1 
Query:    1 MGRDHGMEGK-ATEEEMVAAKMPIAFRDSCAHLLLPLNKCRRSTMYLPWKCSHERHMYEKCQYLDFEKRKAMM---KESKEG 234
            M  D  +E + AT EEM  A++P+A+RDSCAHLL+PLNKCRR T Y PWKC+ ERH YEKCQY++F+KR A M   +ESKEG
Sbjct:   55 MASDAAVEPRQATREEMRDARLPLAYRDSCAHLLIPLNKCRRETWYAPWKCTDERHSYEKCQYVEFKKRVAKMNELRESKEG 136
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig78.14206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ56_ECTSI2.060e-4589.87NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
G9MJU7_HYPVG5.280e-2964.63NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A0G4N0K7_9PEZI7.300e-2964.20NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A0G4MZR7_9PEZI1.040e-2862.96NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A0W7VSI5_9HYPO4.340e-2868.06NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
I1S5X9_GIBZE6.160e-2864.56NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A420YNW9_9PEZI1.820e-2766.67NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A6A6UGI8_9PEZI1.910e-2762.34NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A6A6RFU9_9PEZI4.530e-2762.16NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A2T4C014_TRILO5.760e-2762.20NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig78contigP-fluviatile_contig78:216396..217606 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score150.2
Seed ortholog evalue4e-34
Seed eggNOG ortholog2880.D7FZ56
Preferred nameNDUFB7
KEGG koko:K03963,ko:K04498
KEGG TC3.D.1.6
KEGG Pathwayko00190,ko01100,ko04024,ko04066,ko04068,ko04110,ko04310,ko04330,ko04350,ko04520,ko04630,ko04714,ko04720,ko04723,ko04916,ko04919,ko04922,ko04932,ko05010,ko05012,ko05016,ko05152,ko05161,ko05164,ko05165,ko05166,ko05167,ko05168,ko05169,ko05200,ko05203,ko05206,ko05211,ko05215,map00190,map01100,map04024,map04066,map04068,map04110,map04310,map04330,map04350,map04520,map04630,map04714,map04720,map04723,map04916,map04919,map04922,map04932,map05010,map05012,map05016,map05152,map05161,map05164,map05165,map05166,map05167,map05168,map05169,map05200,map05203,map05206,map05211,map05215
KEGG ModuleM00147
GOsGO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0005758,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007005,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009853,GO:0009987,GO:0010257,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0019866,GO:0022607,GO:0022900,GO:0022904,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0032981,GO:0032991,GO:0033108,GO:0034622,GO:0034641,GO:0042773,GO:0042775,GO:0043094,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0065003,GO:0070013,GO:0070469,GO:0071704,GO:0071840,GO:0072521,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204
EggNOG free text desc.NADH dehydrogenase (quinone) activity
EggNOG OGsKOG3468@1,KOG3468@2759
EC2.3.1.48
COG Functional cat.BK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03000,ko03029,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNADH:ubiquinone oxidoreductase, B18 subunit
Ec32 orthologEc-02_006350.1
Exons2
Model size237
Cds size237
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817205.8191137-CDS-P-fluviatile_contig78:216395..2164411622817205.8191137-CDS-P-fluviatile_contig78:216395..216441Porterinema fluviatile SAG_2381CDSP-fluviatile_contig78 216396..216441 -
1693571511.3728998-CDS-P-fluviatile_contig78:216395..2164411693571511.3728998-CDS-P-fluviatile_contig78:216395..216441Porterinema fluviatile SAG_2381CDSP-fluviatile_contig78 216396..216441 -
1622817205.832034-CDS-P-fluviatile_contig78:217415..2176061622817205.832034-CDS-P-fluviatile_contig78:217415..217606Porterinema fluviatile SAG_2381CDSP-fluviatile_contig78 217416..217606 -
1693571511.3865921-CDS-P-fluviatile_contig78:217415..2176061693571511.3865921-CDS-P-fluviatile_contig78:217415..217606Porterinema fluviatile SAG_2381CDSP-fluviatile_contig78 217416..217606 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig78.14206.1prot_P-fluviatile_contig78.14206.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig78 216396..217606 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig78.14206.1

>prot_P-fluviatile_contig78.14206.1 ID=prot_P-fluviatile_contig78.14206.1|Name=mRNA_P-fluviatile_contig78.14206.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=79bp
MGRDHGMEGKATEEEMVAAKMPIAFRDSCAHLLLPLNKCRRSTMYLPWKC
SHERHMYEKCQYLDFEKRKAMMKESKEG*
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mRNA from alignment at P-fluviatile_contig78:216396..217606-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig78.14206.1 ID=mRNA_P-fluviatile_contig78.14206.1|Name=mRNA_P-fluviatile_contig78.14206.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1211bp|location=Sequence derived from alignment at P-fluviatile_contig78:216396..217606- (Porterinema fluviatile SAG_2381)
ATGGGACGCGATCACGGCATGGAGGGTAAGGCGACGGAGGAGGAGATGGT
GGCGGCAAAAATGCCCATTGCATTCCGGGACTCGTGCGCCCACCTGTTGC
TGCCCCTCAACAAGTGCCGGAGGTCCACCATGTACTTGCCATGGAAGTGC
TCCCATGAGCGCCATATGTACGAGAAGTGCCAGTACCTCGAGTGAGTGTT
CGCGTGCGCTCTTTCTTTTCAGCGTTGTAGGTTGTTCGCCTCTTATCTGG
TCTGGTGTCTTTACCTTTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTGCCGAGCTCTGGTTAATGTTGAATATATCCTGTGACGTTC
AGCTTTTTCGAAGCCCGCATGTTGTTTCGCAGGCCTGATCAAAGTGCTTG
GGCACCTCGCGGACATTCGGAGGCTGACGGGCTACTCGTATCTCGGGTAT
CCCTAATCTTTTGTCTTGGGGGCAGTGTGTCGAAATTACTGACCAGTGCG
ACATCCCGAGGTCTCCTTGAAAGCAACTTCAGCACGGGCGTTTGGGGCGC
TCGGGCGTTGATGAAACTTGCGCACTCGACCACGCTCACCCGTGATTTGC
CGATTGTGTGCCCGCTGCCACCCAGATGTCAACAGTGGAACATCACAGCA
CGTTCCCCTTTTTCCTTGTTTGGTCTTGTAAGTATTAGCACAGTTCTCGT
GGTTTCTGGGTCTTTTTCACATATTTACCCTTCGTCGTCGACGAACAAGT
CTTAGTAGACATGTGACCCTCAGCCTAAATATACGGTGTTGCCGATTAAC
AACCTTAGGCACGTAACCCTAATCATAATCCTCTTCCTAACCTTGCCCCG
TGCAGCCGATTAACAAGCCTCAGAGTCCTGCTACCATTCGTAGCTGTGCC
GCCATGTCATGTTTTGCTCGTGGGGGAGGGTCTCTCCCCTCCGGCTGAGC
GCCTGATTGACTTGCGTGGAGAACTCCACCAAAGATGCCTCGTGTCCCGT
GCCATGCTTTAGTGCACGTTTCCCCCGTAGACTCGGCCAAGTCACATGAT
AGAGAAACATAGCATTTGAGCGGTCCTTCATGCCAGCACGTGTCTTCTCA
CGTTATTTTTCTTCGCCGTAATCGCCCCATTGGGCGCCTCTATTTCGCCC
ACTCTCCGGCCGCAGCTTCGAGAAAAGGAAAGCGATGATGAAGGAGAGCA
AGGAAGGGTAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig78:216396..217606-

>mRNA_P-fluviatile_contig78.14206.1 ID=mRNA_P-fluviatile_contig78.14206.1|Name=mRNA_P-fluviatile_contig78.14206.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=474bp|location=Sequence derived from alignment at P-fluviatile_contig78:216396..217606- (Porterinema fluviatile SAG_2381)
ATGGGACGCGATCACGGCATGGAGGGTAAGGCGACGGAGGAGGAGATGGT
GGCGGCAAAAATGCCCATTGCATTCCGGGACTCGTGCGCCCACCTGTTGC
TGCCCCTCAACAAGTGCCGGAGGTCCACCATGTACTTGCCATGGAAGTGC
TCCCATGAGCGCCATATGTACGAGAAGTGCCAGTACCTCGAATGGGACGC
GATCACGGCATGGAGGGTAAGGCGACGGAGGAGGAGATGGTGGCGGCAAA
AATGCCCATTGCATTCCGGGACTCGTGCGCCCACCTGTTGCTGCCCCTCA
ACAAGTGCCGGAGGTCCACCATGTACTTGCCATGGAAGTGCTCCCATGAG
CGCCATATGTACGAGAAGTGCCAGTACCTCGACTTCGAGAAAAGGAAAGC
GATGATGAAGGAGAGCAAGGAAGGGTAGCTTCGAGAAAAGGAAAGCGATG
ATGAAGGAGAGCAAGGAAGGGTAG
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